Miyakogusa Predicted Gene
- Lj0g3v0239469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0239469.1 tr|D7LZR6|D7LZR6_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,23.62,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PPR,Pentatricopeptide repeat; no descript,CUFF.15711.1
(495 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 3e-81
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 5e-81
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 1e-79
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 288 7e-78
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 286 2e-77
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 1e-76
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 2e-76
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 282 3e-76
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 280 1e-75
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 1e-73
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 5e-73
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 1e-72
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 270 2e-72
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 269 3e-72
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 266 3e-71
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 263 2e-70
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 3e-70
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 262 4e-70
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 6e-70
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 261 1e-69
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 1e-69
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 259 4e-69
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 5e-69
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 1e-68
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 256 3e-68
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 252 4e-67
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 6e-67
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 5e-66
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 247 1e-65
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 246 2e-65
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 8e-65
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 8e-65
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 242 5e-64
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 1e-63
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 2e-63
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 239 4e-63
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 236 3e-62
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 236 4e-62
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 5e-62
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 8e-61
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 1e-60
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 229 2e-60
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 9e-60
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 226 2e-59
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 4e-59
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 8e-59
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 9e-59
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 9e-59
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 224 1e-58
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 2e-58
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 223 2e-58
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 3e-58
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 4e-58
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 4e-58
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 1e-57
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 2e-57
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 5e-57
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 5e-57
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 7e-57
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 217 2e-56
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 216 2e-56
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 216 2e-56
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 5e-56
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 5e-56
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 5e-56
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 9e-56
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 4e-55
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 4e-55
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 7e-55
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 1e-54
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 210 2e-54
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 6e-54
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 6e-54
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 205 7e-53
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 7e-53
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 8e-53
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 204 1e-52
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 7e-51
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 7e-51
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 1e-50
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 7e-50
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 7e-49
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 190 2e-48
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 188 6e-48
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 4e-47
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 7e-46
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 181 7e-46
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 179 5e-45
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 6e-45
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 2e-44
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 8e-44
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 4e-43
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 2e-38
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 145 9e-35
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 5e-30
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 115 9e-26
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 102 8e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 92 1e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 90 3e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 88 1e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 87 2e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 87 4e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 79 5e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 79 8e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 9e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 3e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 76 4e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 76 4e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 7e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 74 2e-13
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 6e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 70 3e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 66 4e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 9e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 63 5e-10
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 60 2e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 60 4e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 58 2e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 58 2e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 57 3e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 57 4e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 57 4e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 54 2e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 53 5e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 240/424 (56%), Gaps = 38/424 (8%)
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
F++N +IRA H+ +P+S++ M + + P+ +TFPFL S P H Q
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYA------------------------------ASPRLF 188
HA +L G D +V SLL +Y+ A L
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 189 SLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQY-----AGVAPNRVTMVN 243
R+LFDEM R+V+SW+ +I G+ GK+ +AL F +MQ A V PN TM
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 244 ALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV-KEK 302
L+AC GA+E G W+H +I + E+D+VLGTALIDMYAKCG +E RVF+++ +K
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRME-QDGVRADEVTLLAVLSACNHSGLVDMGRQI 361
+V ++A+I LA+ +E +LF+ M D + + VT + +L AC H GL++ G+
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324
Query: 362 FGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQ 421
F ++E ++G P+++HY CMVDL RSG ++EA + MP +P +WGSLL S+
Sbjct: 325 FKMMIE-EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 422 GDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSS 481
GD++ E ++L+EL+P NS YV LSN+YA+ GRW +V+ +R M+ + + K GCS
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 482 VEVE 485
VEVE
Sbjct: 444 VEVE 447
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 298 bits (764), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 253/479 (52%), Gaps = 38/479 (7%)
Query: 44 CHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXX--XVPRPHVFIF 101
C + ++QI A+++ L + F++ C S RP F++
Sbjct: 24 CSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLW 83
Query: 102 NSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAH 161
N +IR FS S SL ++ M ++ N YTFP L K+ S F + +HA
Sbjct: 84 NLMIRGFSCSDEPERSLL---LYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 162 VLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD- 220
+ KLG+ +D+Y NSL+ YA + F L LFD + D VSW +I G+ AGK D
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGN-FKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199
Query: 221 ------------------------------DALLAFEQMQYAGVAPNRVTMVNALAACAD 250
+AL F +MQ + V P+ V++ NAL+ACA
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 259
Query: 251 SGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAV 310
GA+E G WIH ++ + +D VLG LIDMYAKCG +EE + VF ++K+K+V W A+
Sbjct: 260 LGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTAL 319
Query: 311 IKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKY 370
I G A G EAI F M++ G++ + +T AVL+AC+++GLV+ G+ IF + +E Y
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-YSMERDY 378
Query: 371 GFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFV 430
P ++HY C+VDLL R+G L EA ++ MP P +WG+LL + + ++E E +
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 431 ARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
L+ ++P + YVH +N++A +WD + R +MK++ + K GCS++ +E H
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 256/484 (52%), Gaps = 36/484 (7%)
Query: 37 VTLLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRP 96
VT LK ++ ++Q +I+ L + FI C S+ P P
Sbjct: 18 VTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEAC-SNAGHLRYAYSVFTHQPCP 76
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
+ ++ N++IRA S + ++++ + P+ +TFPF+ K +
Sbjct: 77 NTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGR 136
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDV------------- 203
+H V+ G ++V L+ +Y + L R++FDEM +DV
Sbjct: 137 QIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGD-ARKMFDEMLVKDVNVWNALLAGYGKV 195
Query: 204 --------------------VSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVN 243
VSWT +I G+ +G+ +A+ F++M V P+ VT++
Sbjct: 196 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 255
Query: 244 ALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKN 303
L+ACAD G++E+G I ++ G V L A+IDMYAK G + + + VF V E+N
Sbjct: 256 VLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN 315
Query: 304 VFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFG 363
V TW +I GLA G EA+ +FNRM + GVR ++VT +A+LSAC+H G VD+G+++F
Sbjct: 316 VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN 375
Query: 364 FLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGD 423
+ KYG PN++HY CM+DLL R+G LREA EV++ MPF A+WGSLL +S D
Sbjct: 376 SM-RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 434
Query: 424 LEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
LE E +L++LEP NS Y+ L+NLY+ +GRWD+ +R MMK + K G SS+E
Sbjct: 435 LELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIE 494
Query: 484 VEEQ 487
VE +
Sbjct: 495 VENR 498
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 288 bits (736), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 155/470 (32%), Positives = 264/470 (56%), Gaps = 8/470 (1%)
Query: 22 TFDYTLRMSGFSDRAVTLLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXX 81
TF ++ + + LL C+S + QIQA I +++ +A I C
Sbjct: 17 TFTKHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPT 75
Query: 82 XXXXXXXX--XXXVPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTF 139
+ P + IFNS+ R +S N L S+F + + ILP++YTF
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSR---FTNPLEVFSLFVEILEDGILPDNYTF 132
Query: 140 PFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT 199
P L K+ + + + +H +KLG ++YV +L+ +Y + S R +FD +
Sbjct: 133 PSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDS-ARCVFDRIV 191
Query: 200 HRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAW 259
VV + MI G+ + ++AL F +MQ + PN +T+++ L++CA G++++G W
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 260 IHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKS 319
IH + +++ + V + TALIDM+AKCG +++ V +F ++ K+ W+A+I A
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 320 GEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHY 379
E+++ +F RM + V+ DE+T L +L+AC+H+G V+ GR+ F +V K+G +P++KHY
Sbjct: 312 AEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMV-SKFGIVPSIKHY 370
Query: 380 ACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEP 439
MVDLL+R+G+L +A+E + +P PT +W LL + S +L+ +E V+ ++ EL+
Sbjct: 371 GSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDD 430
Query: 440 ANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
++ YV LSNLYA +W+ V+ +R +MKDR+ K GCSS+EV H
Sbjct: 431 SHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVH 480
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 254/473 (53%), Gaps = 42/473 (8%)
Query: 46 SRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLI 105
SR ++I A +I+H L + + + C V P+VF++NS+I
Sbjct: 22 SRNEWKKINASIIIHGLSQSSFMVTKMVDFCDK-IEDMDYATRLFNQVSNPNVFLYNSII 80
Query: 106 RAFSHSHHHHNSL--TPLSIFAHMHRNTI-LPNHYTFPFLFKSLSAPCHFAQAQSVHAHV 162
RA++H NSL + I+ + R + LP+ +TFPF+FKS ++ + VH H+
Sbjct: 81 RAYTH-----NSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 135
Query: 163 LKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDV------------------- 203
K G + N+L+ +Y L ++FDEM RDV
Sbjct: 136 CKFGPRFHVVTENALIDMYMKFDDLVD-AHKVFDEMYERDVISWNSLLSGYARLGQMKKA 194
Query: 204 ------------VSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADS 251
VSWT MI G+ G + +A+ F +MQ AG+ P+ +++++ L +CA
Sbjct: 195 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL 254
Query: 252 GAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVI 311
G++E+G WIH + R G+ + ALI+MY+KCG + + +++F ++ K+V +W+ +I
Sbjct: 255 GSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMI 314
Query: 312 KGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG 371
G A + AI FN M++ V+ + +T L +LSAC+H G+ G + F + + Y
Sbjct: 315 SGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ-DYQ 373
Query: 372 FIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVA 431
P ++HY C++D+LAR+G L A E+ + MP P +WGSLL S ++ G+L+ +
Sbjct: 374 IEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAM 433
Query: 432 RKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
LVELEP + YV L+N+YA++G+W+DV ++R M+++ + K G S +EV
Sbjct: 434 DHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEV 486
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 252/452 (55%), Gaps = 24/452 (5%)
Query: 44 CHSRLHVQQIQAQLIL----HNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVF 99
C S +++QI AQ+I H+ + H TVC S+ +P P VF
Sbjct: 19 CKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQ------IPNPSVF 72
Query: 100 IFNSLIRAFSHSHHHHNSLTPLSIFAHM---HRNTILPNHYTFPFLFKSLSAPCHFAQ-A 155
++N+LI + +H+ + S++ + N + PN +T+P LFK+ + +
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 156 QSVHAHVLKLGHL--HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+++HAHVLK HD +V +L+G YA +L R LF+ + D+ +W ++ +
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLRE-ARSLFERIREPDLATWNTLLAAY 191
Query: 214 RNAGKFD---DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
N+ + D + LL F +MQ V PN +++V + +CA+ G G W H ++ +N
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
L+ +GT+LID+Y+KCG + +VF + +++V +NA+I+GLA+ G+E I L+ +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
G+ D T + +SAC+HSGLVD G QIF + + YG P V+HY C+VDLL RSG
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSM-KAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSN 450
L EA E ++ MP P +W S L SS++ GD E E + L+ LE NS YV LSN
Sbjct: 368 RLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSN 427
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
+YA + RW DVEK R +MKD ++ K G S++
Sbjct: 428 IYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 235/425 (55%), Gaps = 34/425 (8%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+ VF +N +I ++ + S+ + M RN + P T + + S
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESI---ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDL 254
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAA------SPRLF-------------------- 188
+ VH +V + + + N+L+ YAA + R+F
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVE 314
Query: 189 ----SLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNA 244
L R FD+M RD +SWT+MI G+ AG F+++L F +MQ AG+ P+ TMV+
Sbjct: 315 RGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSV 374
Query: 245 LAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNV 304
L ACA G++E+G WI +I +N + DVV+G ALIDMY KCG E+ +VF + +++
Sbjct: 375 LTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDK 434
Query: 305 FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGF 364
FTW A++ GLA G+EAI++F +M+ ++ D++T L VLSACNHSG+VD R+ F
Sbjct: 435 FTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAK 494
Query: 365 LVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDL 424
+ + P++ HY CMVD+L R+G ++EA+E++R MP +P +WG+LL +S+ D
Sbjct: 495 M-RSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDE 553
Query: 425 EFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
+E A+K++ELEP N A Y L N+YA RW D+ +VR + D + K G S +EV
Sbjct: 554 PMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEV 613
Query: 485 EEQGH 489
H
Sbjct: 614 NGFAH 618
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 221/476 (46%), Gaps = 50/476 (10%)
Query: 16 PFCSVLTFDYTLRMSGFSD-------RAVTLLKDFCHSRLHVQQIQAQLILHNLQSNPTI 68
PF S L+ L MS ++ R +++L C + +Q+ +Q I + NPT
Sbjct: 10 PFNSELSIFKALLMSTITESISNDYSRFISIL-GVCKTTDQFKQLHSQSITRGVAPNPTF 68
Query: 69 AHH-FITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHM 127
F+ C +P P V ++N++I+ +S + ++ +M
Sbjct: 69 QKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGV---RLYLNM 125
Query: 128 HRNTILPNHYTFPFLFKSLSAPCH-FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPR 186
+ + P+ +TFPFL L A + +H HV+K G ++YV N+L+ +Y+
Sbjct: 126 LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG- 184
Query: 187 LFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALA 246
L + R +FD DV SW +MI G+ ++++++ +M+ V+P VT++ L+
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLS 244
Query: 247 ACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFT 306
AC+ ++ +H+++ E + L AL++ YA CG ++ VR+F S+K ++V +
Sbjct: 245 ACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVIS 304
Query: 307 WNAVIKG------LALAKSG-------------------------EEAIRLFNRMEQDGV 335
W +++KG L LA++ E++ +F M+ G+
Sbjct: 305 WTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
DE T+++VL+AC H G +++G I ++ + K +V ++D+ + G +A
Sbjct: 365 IPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK--IKNDVVVGNALIDMYFKCGCSEKA 422
Query: 396 FEVMRCMPFDPTKAMWGSLLV--SSKSQGDLEFSEFVARKLVELEPANSAYYVHLS 449
+V M K W +++V ++ QG F + + ++P + Y LS
Sbjct: 423 QKVFHDMD-QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 255/483 (52%), Gaps = 36/483 (7%)
Query: 39 LLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHV 98
L+ C + ++QI A LI L S+ A + C + + +
Sbjct: 30 LIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNP 89
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHM--HRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
F++N++IR FS S ++ SIF M ++ P T+P +FK+ +
Sbjct: 90 FVWNTIIRGFSRSSFPEMAI---SIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRL------------------------FSLC- 191
+H V+K G D ++ N++L +Y L F+ C
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 192 -----RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALA 246
+ LFDEM R+ VSW MI GF G+F DAL F +MQ V P+ TMV+ L
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 247 ACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFT 306
ACA GA E G WIH++I RN +EL+ ++ TALIDMY KCG +EEG+ VF +K +
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 307 WNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
WN++I GLA E A+ LF+ +E+ G+ D V+ + VL+AC HSG V + F +
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 367 EGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEF 426
E KY P++KHY MV++L +G L EA +++ MP + +W SLL + + G++E
Sbjct: 387 E-KYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEM 445
Query: 427 SEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEE 486
++ A+ L +L+P + YV LSN YA G +++ + R +MK+RQ+ K++GCSS+EV+
Sbjct: 446 AKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDF 505
Query: 487 QGH 489
+ H
Sbjct: 506 EVH 508
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 258/497 (51%), Gaps = 47/497 (9%)
Query: 26 TLRMSGFSDRAVTLLKDF--CHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXX 83
TLR+S R TL+ C + HV I A++I + + I VC S
Sbjct: 23 TLRLS----RRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVC-STLDSV 77
Query: 84 XXXXXXXXXVPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLF 143
V P+V+++ ++I F S S +S++ M N++LP++Y +
Sbjct: 78 DYAYDVFSYVSNPNVYLYTAMIDGFVSSGR---SADGVSLYHRMIHNSVLPDNYVITSVL 134
Query: 144 KSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR-- 201
K+ C + +HA VLKLG V ++ +Y S L + +++FDEM R
Sbjct: 135 KA----CDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVN-AKKMFDEMPDRDH 189
Query: 202 -----------------------------DVVSWTVMIMGFRNAGKFDDALLAFEQMQYA 232
D V WT MI G + + AL F +MQ
Sbjct: 190 VAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME 249
Query: 233 GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEG 292
V+ N T V L+AC+D GA+E+G W+H F+ EL +G ALI+MY++CG + E
Sbjct: 250 NVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEA 309
Query: 293 VRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHS 352
RVF +++K+V ++N +I GLA+ + EAI F M G R ++VTL+A+L+AC+H
Sbjct: 310 RRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHG 369
Query: 353 GLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWG 412
GL+D+G ++F + + + P ++HY C+VDLL R G L EA+ + +P +P M G
Sbjct: 370 GLLDIGLEVFNSM-KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLG 428
Query: 413 SLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQ 472
+LL + K G++E E +A++L E E +S YV LSNLYA G+W + ++R M+D
Sbjct: 429 TLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSG 488
Query: 473 LTKDLGCSSVEVEEQGH 489
+ K+ GCS++EV+ Q H
Sbjct: 489 IEKEPGCSTIEVDNQIH 505
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 250/490 (51%), Gaps = 50/490 (10%)
Query: 44 CHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQS---HXXXXXXXXXXXXXVPRPHVFI 100
C + + QI A I + A + C + H +P+ + F
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 92
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTIL-PNHYTFPFLFKSLSAPCHFAQAQSVH 159
+N++IR FS S +L +++F M + + PN +TFP + K+ + + + +H
Sbjct: 93 WNTIIRGFSESDED-KALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 160 AHVLKLGHLHDIYVHNSLLGVYA-----ASPRLF-------------------------- 188
LK G D +V ++L+ +Y R+
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 189 -------------SLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA 235
R LFD+M R VVSW MI G+ G F DA+ F +M+ +
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 236 PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRV 295
PN VT+V+ L A + G++E+G W+H + +G +D VLG+ALIDMY+KCG +E+ + V
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 296 FSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLV 355
F + +NV TW+A+I G A+ +AI F +M Q GVR +V + +L+AC+H GLV
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 356 DMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLL 415
+ GR+ F +V G P ++HY CMVDLL RSG L EA E + MP P +W +LL
Sbjct: 392 EEGRRYFSQMVSVD-GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Query: 416 VSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTK 475
+ + QG++E + VA L+++ P +S YV LSN+YA G W +V ++R MK++ + K
Sbjct: 451 GACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRK 510
Query: 476 DLGCSSVEVE 485
D GCS ++++
Sbjct: 511 DPGCSLIDID 520
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 226/397 (56%), Gaps = 9/397 (2%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+ F+++++IR S S H L + I P++ TF FL + C F+
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVG 135
Query: 156 QSVHAHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+ +H V+K G L D +V +L +Y LF R++FDE+ DVV W V++ G+
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFD-ARKVFDEIPQPDVVKWDVLMNGYV 194
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW-ELDV 273
G + L F++M G+ P+ ++ AL ACA GA+ G WIH+F+++ W E DV
Sbjct: 195 RCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDV 254
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME-Q 332
+GTAL+DMYAKCG +E V VF + +NVF+W A+I G A ++A +R+E +
Sbjct: 255 FVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERE 314
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
DG++ D V LL VL+AC H G ++ GR + + E +YG P +HY+C+VDL+ R+G L
Sbjct: 315 DGIKPDSVVLLGVLAACAHGGFLEEGRTMLENM-EARYGITPKHEHYSCIVDLMCRAGRL 373
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPAN----SAYYVHL 448
+A +++ MP P ++WG+LL ++ ++E E + L++LE N A V L
Sbjct: 374 DDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQL 433
Query: 449 SNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVE 485
SN+Y + R + KVRGM++ R + K G S +EV+
Sbjct: 434 SNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVD 470
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 261/513 (50%), Gaps = 45/513 (8%)
Query: 12 STTLPFCSVLTFDYTLRMSGFSDRAVTLLKDFCHSRLHVQQIQAQLILHNL---QSNPTI 68
+T+LP + L+ T R + +L D S V QI A ++ HNL P +
Sbjct: 8 ATSLP-QNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVL 66
Query: 69 AHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMH 128
SH + P +F+F + I S + + ++ +
Sbjct: 67 NLKLHRAYASHGKIRHSLALFHQTID-PDLFLFTAAINTASINGLKDQAFL---LYVQLL 122
Query: 129 RNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLF 188
+ I PN +TF L KS C + +H HVLK G D YV L+ VYA +
Sbjct: 123 SSEINPNEFTFSSLLKS----CSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVV 178
Query: 189 SL------------------------------CRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
S R LFD M RD+VSW VMI G+ G
Sbjct: 179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGF 238
Query: 219 FDDALLAFEQMQYAGV-APNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
+DAL+ F+++ G P+ +T+V AL+AC+ GA+E G WIH F++ + L+V + T
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCT 298
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ-DGVR 336
LIDMY+KCG +EE V VF+ K++ WNA+I G A+ ++A+RLFN M+ G++
Sbjct: 299 GLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQ 358
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
++T + L AC H+GLV+ G +IF + + +YG P ++HY C+V LL R+G L+ A+
Sbjct: 359 PTDITFIGTLQACAHAGLVNEGIRIFESMGQ-EYGIKPKIEHYGCLVSLLGRAGQLKRAY 417
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMG 456
E ++ M D +W S+L S K GD + +A L+ L NS YV LSN+YA +G
Sbjct: 418 ETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVG 477
Query: 457 RWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
++ V KVR +MK++ + K+ G S++E+E + H
Sbjct: 478 DYEGVAKVRNLMKEKGIVKEPGISTIEIENKVH 510
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 248/476 (52%), Gaps = 43/476 (9%)
Query: 50 VQQIQAQLILHNLQSNPTIAHHFI-TVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAF 108
V+QI A+L + + + HF+ V S +P +F NS+IRA
Sbjct: 22 VRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRA- 80
Query: 109 SHSHHHHNSLTPLSIFAHMHR-----NTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVL 163
H S P F R N + P++YT FL ++ + VH +
Sbjct: 81 -----HCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTI 135
Query: 164 KLGHLHDIYVHNSLLGVYA------ASPRLFS------------------------LCRQ 193
+ G +D +V L+ +YA + ++F+ R+
Sbjct: 136 RRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARK 195
Query: 194 LFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGA 253
LF+ M RD ++W MI G+ G+ +AL F MQ GV N V M++ L+AC GA
Sbjct: 196 LFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGA 255
Query: 254 VEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKG 313
++ G W H +I RN ++ V L T L+D+YAKCG +E+ + VF ++EKNV+TW++ + G
Sbjct: 256 LDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNG 315
Query: 314 LALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFI 373
LA+ GE+ + LF+ M+QDGV + VT ++VL C+ G VD G++ F + ++G
Sbjct: 316 LAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM-RNEFGIE 374
Query: 374 PNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARK 433
P ++HY C+VDL AR+G L +A +++ MP P A+W SLL +S+ +LE ++K
Sbjct: 375 PQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKK 434
Query: 434 LVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
++ELE AN YV LSN+YA+ WD+V VR MK + + K GCS +EV + H
Sbjct: 435 MLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVH 490
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 222/397 (55%), Gaps = 9/397 (2%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+ F+++++IR S S H L + I P++ TF FL + C F+
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVG 135
Query: 156 QSVHAHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+ +H V+K G L D +V +L +Y L R++FDE+ DVV W V++ G+
Sbjct: 136 KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLD-ARKVFDEIPQPDVVKWDVLMNGYV 194
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW-ELDV 273
G + L F +M G+ P+ ++ AL ACA GA+ G WIH+F+++ W E DV
Sbjct: 195 RCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDV 254
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME-Q 332
+GTAL+DMYAKCG +E V VF + +NVF+W A+I G A ++A+ R+E +
Sbjct: 255 FVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERE 314
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
DG++ D V LL VL+AC H G ++ GR + + E +Y P +HY+C+VDL+ R+G L
Sbjct: 315 DGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM-EARYEITPKHEHYSCIVDLMCRAGRL 373
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPAN----SAYYVHL 448
+A ++ MP P ++WG+LL ++ ++E E + L++LE N A V L
Sbjct: 374 DDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQL 433
Query: 449 SNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVE 485
SN+Y + R + KVRGM++ R + K G S +EV+
Sbjct: 434 SNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVD 470
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 247/471 (52%), Gaps = 39/471 (8%)
Query: 45 HSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSL 104
++R + +I A L+ H L + + HFI++C S + P+V +FN++
Sbjct: 15 NTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGS-LSNSDYANRVFSHIQNPNVLVFNAM 73
Query: 105 IRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLK 164
I+ +S L LS F+ M I + YT+ L KS S+ + VH +++
Sbjct: 74 IKCYSLVGP---PLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIR 130
Query: 165 LGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALL 224
G + ++ +Y + R+ +++FDEM+ R+VV W +MI GF ++G + L
Sbjct: 131 TGFHRLGKIRIGVVELYTSGGRMGD-AQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLH 189
Query: 225 AFEQMQY-------------------------------AGVAPNRVTMVNALAACADSGA 253
F+QM G P+ T+V L A G
Sbjct: 190 LFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGV 249
Query: 254 VEMGAWIHDFIRRNGWELD-VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIK 312
++ G WIH +G D + +G AL+D Y K G +E +F ++ +NV +WN +I
Sbjct: 250 LDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLIS 309
Query: 313 GLALAKSGEEAIRLFNRMEQDG-VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG 371
G A+ GE I LF+ M ++G V +E T L VL+ C+++G V+ G ++FG ++E ++
Sbjct: 310 GSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMME-RFK 368
Query: 372 FIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVA 431
+HY MVDL++RSG + EAF+ ++ MP + AMWGSLL + +S GD++ +E A
Sbjct: 369 LEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAA 428
Query: 432 RKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
+LV++EP NS YV LSNLYAE GRW DVEKVR +MK +L K G S++
Sbjct: 429 MELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 266/463 (57%), Gaps = 12/463 (2%)
Query: 34 DRAVTLLKDFCHSRL-HVQQIQAQLILHNLQ-SNPTIAHHFI--TVCQSHXXXXXXXXXX 89
++ + LL+ + S + ++QI A I H + S+ + H I V
Sbjct: 16 EKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKV 75
Query: 90 XXXVPRP-HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTIL-PNHYTFPFLFKSLS 147
+ +P +VFI+N+LIR ++ NS++ S++ M + ++ P+ +T+PFL K+++
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIG---NSISAFSLYREMRVSGLVEPDTHTYPFLIKAVT 132
Query: 148 APCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWT 207
+++H+ V++ G IYV NSLL +YA + S ++FD+M +D+V+W
Sbjct: 133 TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVAS-AYKVFDKMPEKDLVAWN 191
Query: 208 VMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRN 267
+I GF GK ++AL + +M G+ P+ T+V+ L+ACA GA+ +G +H ++ +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 268 GWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLF 327
G ++ L+D+YA+CGRVEE +F + +KN +W ++I GLA+ G+EAI LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 328 NRMEQ-DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
ME +G+ E+T + +L AC+H G+V G + F + E +Y P ++H+ CMVDLL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE-EYKIEPRIEHFGCMVDLL 370
Query: 387 ARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYV 446
AR+G +++A+E ++ MP P +W +LL + GD + +EF ++++LEP +S YV
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 447 HLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
LSN+YA RW DV+K+R M + K G S VEV + H
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVH 473
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 205/325 (63%), Gaps = 2/325 (0%)
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
++ N+++ YA ++ S + LFD+M RD VSW MI G+ +G +AL F Q
Sbjct: 341 RNVSTWNTMITGYAQCGKI-SEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 229 MQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGR 288
M+ G NR + +AL+ CAD A+E+G +H + + G+E +G AL+ MY KCG
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 289 VEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
+EE +F + K++ +WN +I G + GE A+R F M+++G++ D+ T++AVLSA
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 349 CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTK 408
C+H+GLVD GRQ F + + YG +PN +HYACMVDLL R+G L +A +M+ MPF+P
Sbjct: 520 CSHTGLVDKGRQYF-YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578
Query: 409 AMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMM 468
A+WG+LL +S+ G+ E +E A K+ +EP NS YV LSNLYA GRW DV K+R M
Sbjct: 579 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRM 638
Query: 469 KDRQLTKDLGCSSVEVEEQGHTSQV 493
+D+ + K G S +E++ + HT V
Sbjct: 639 RDKGVKKVPGYSWIEIQNKTHTFSV 663
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 118/284 (41%), Gaps = 49/284 (17%)
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
D+ N ++ Y + R R+LF+ M RDV SW M+ G+ G DDA F++
Sbjct: 124 RDLVSWNVMIKGYVRN-RNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 229 MQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL----------------- 271
M N V+ L+A + +E + F R W L
Sbjct: 183 MP----EKNDVSWNALLSAYVQNSKMEEACML--FKSRENWALVSWNCLLGGFVKKKKIV 236
Query: 272 ------------DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKS 319
DVV +I YA+ G+++E ++F ++VFTW A++ G +
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 320 GEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHY 379
EEA LF++M + +EV+ A+L+ ++M +++F + NV +
Sbjct: 297 VEEARELFDKMPE----RNEVSWNAMLAGYVQGERMEMAKELFDVMP------CRNVSTW 346
Query: 380 ACMVDLLARSGSLREAFEVMRCMP-FDPTKAMWGSLLVSSKSQG 422
M+ A+ G + EA + MP DP W +++ G
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVS--WAAMIAGYSQSG 388
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 246/450 (54%), Gaps = 20/450 (4%)
Query: 49 HVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAF 108
+QQ+ A LI+ + ++ IT+ S VP P F+FNS+I++
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTKLITLACS-ARAIAYTHLLFLSVPLPDDFLFNSVIKST 82
Query: 109 SHSHHHHNSLTPLSIFAHMHR---NTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKL 165
S PL A+ R + + P++YTF + KS + + VH H +
Sbjct: 83 SKLR------LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVS 136
Query: 166 GHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLA 225
G D YV +L+ Y+ + RQ+FD M + +V+W ++ GF G D+A+
Sbjct: 137 GFGLDTYVQAALVTFYSKCGDMEG-ARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQV 195
Query: 226 FEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAK 285
F QM+ +G P+ T V+ L+ACA +GAV +G+W+H +I G +L+V LGTALI++Y++
Sbjct: 196 FYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSR 255
Query: 286 CGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD-GVRADEVTLLA 344
CG V + VF +KE NV W A+I G++A+ LFN+ME D G + VT +A
Sbjct: 256 CGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVA 315
Query: 345 VLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPF 404
VLSAC H+GLV+ GR ++ + + Y IP V+H+ CMVD+L R+G L EA++ +
Sbjct: 316 VLSACAHAGLVEEGRSVYKRMTK-SYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIH--QL 372
Query: 405 DPT-----KAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWD 459
D T A+W ++L + K + + +A++L+ LEP N ++V LSN+YA G+ D
Sbjct: 373 DATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTD 432
Query: 460 DVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+V +R M L K +G S +EVE + +
Sbjct: 433 EVSHIRDGMMRNNLRKQVGYSVIEVENKTY 462
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 240/478 (50%), Gaps = 40/478 (8%)
Query: 49 HVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAF 108
H++Q+Q+ +I+ L + + + C P+ ++ +++ A+
Sbjct: 39 HLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAY 98
Query: 109 SHSHHHHNSLTPLSIFAHM-HRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLG- 166
S S H S + S F M +R+ PNH+ +P + KS VH H+ K G
Sbjct: 99 SSSLPLHAS-SAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGF 157
Query: 167 HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAF 226
HL+ + V +LL YA+S +L RQLFDEM+ R+VVSWT M+ G+ +G +A+ F
Sbjct: 158 HLY-VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALF 216
Query: 227 EQM--------------------------------QYAGVAPNRVTMVNALAACADSGAV 254
E M + PN VT+V L+ACA +G +
Sbjct: 217 EDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL 276
Query: 255 EMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGL 314
++ IH F R DV + +L+D+Y KCG +EE VF +K++ WN++I
Sbjct: 277 QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCF 336
Query: 315 ALAKSGEEAIRLFNRMEQ---DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG 371
AL EEAI +F M + + ++ D +T + +L+AC H GLV GR F L+ ++G
Sbjct: 337 ALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFD-LMTNRFG 395
Query: 372 FIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVA 431
P ++HY C++DLL R+G EA EVM M +A+WGSLL + K G L+ +E
Sbjct: 396 IEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAV 455
Query: 432 RKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+ LV L P N Y ++NLY EMG W++ + R M+K + K G S +E++ + H
Sbjct: 456 KNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVH 513
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 212/363 (58%), Gaps = 3/363 (0%)
Query: 124 FAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLH-DIYVHNSLLGVYA 182
F M + + N T + K+ +SVH L+ G + D+++ +SL+ +Y
Sbjct: 192 FVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYG 251
Query: 183 ASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
+ +++FDEM R+VV+WT +I G+ + FD +L FE+M + VAPN T+
Sbjct: 252 KCS-CYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLS 310
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK 302
+ L+ACA GA+ G +H ++ +N E++ GT LID+Y KCG +EE + VF + EK
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
NV+TW A+I G A +A LF M V +EVT +AVLSAC H GLV+ GR++F
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
++G++ P HYACMVDL R G L EA ++ MP +PT +WG+L S
Sbjct: 431 -LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHK 489
Query: 423 DLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
D E ++ A ++++L+P++S Y L+NLY+E WD+V +VR MKD+Q+ K G S +
Sbjct: 490 DYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWI 549
Query: 483 EVE 485
EV+
Sbjct: 550 EVK 552
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 164/305 (53%), Gaps = 16/305 (5%)
Query: 100 IFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSL-----SAPCHFAQ 154
+++SLI FS + L+ L+ + HM RN ++P+ +TFP L K++ S P F
Sbjct: 69 LWDSLIGHFSGGITLNRRLSFLA-YRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQF-- 125
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
HAH++K G D +V NSL+ Y++S LF +LFD +DVV+WT MI GF
Sbjct: 126 ----HAHIVKFGLDSDPFVRNSLISGYSSSG-LFDFASRLFDGAEDKDVVTWTAMIDGFV 180
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW-ELDV 273
G +A++ F +M+ GVA N +T+V+ L A V G +H G + DV
Sbjct: 181 RNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDV 240
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
+G++L+DMY KC ++ +VF + +NV TW A+I G ++ ++ + +F M +
Sbjct: 241 FIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS 300
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
V +E TL +VLSAC H G + GR++ ++++ N ++DL + G L
Sbjct: 301 DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI--NTTAGTTLIDLYVKCGCLE 358
Query: 394 EAFEV 398
EA V
Sbjct: 359 EAILV 363
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 146 LSAPCHFAQAQSVHAHVLKLGHLH---DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRD 202
L P HF + +H +L + D+++ L A+ + F R+L ++
Sbjct: 8 LDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQ-FRYARRLLCQLQTLS 66
Query: 203 VVSWTVMIMGFRNAGKFDDAL--LAFEQMQYAGVAPNRVT---MVNALAACADSGAVEMG 257
+ W +I F + L LA+ M+ GV P+R T ++ A+ DS +
Sbjct: 67 IQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFH 126
Query: 258 AWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALA 317
A I F G + D + +LI Y+ G + R+F ++K+V TW A+I G
Sbjct: 127 AHIVKF----GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 318 KSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIP-NV 376
S EA+ F M++ GV A+E+T+++VL A V GR + G +E G + +V
Sbjct: 183 GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET--GRVKCDV 240
Query: 377 KHYACMVDLLARSGSLREAFEVMRCMP 403
+ +VD+ + +A +V MP
Sbjct: 241 FIGSSLVDMYGKCSCYDDAQKVFDEMP 267
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 186/298 (62%), Gaps = 1/298 (0%)
Query: 187 LFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALA 246
L + R+LFD+M +DVV W MI G A + DAL F++MQ + P+ +TM++ L+
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 247 ACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFT 306
AC+ GA+++G WIH +I + L+V LGT+L+DMYAKCG + E + VF ++ +N T
Sbjct: 398 ACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT 457
Query: 307 WNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
+ A+I GLAL AI FN M G+ DE+T + +LSAC H G++ GR F +
Sbjct: 458 YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQM- 516
Query: 367 EGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEF 426
+ ++ P +KHY+ MVDLL R+G L EA +M MP + A+WG+LL + G++E
Sbjct: 517 KSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVEL 576
Query: 427 SEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
E A+KL+EL+P++S YV L +Y E W+D ++ R MM +R + K GCSS+EV
Sbjct: 577 GEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 199/394 (50%), Gaps = 41/394 (10%)
Query: 40 LKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQ-SHXXXXXXXXXXXXXVPRPHV 98
L + C LH++QIQAQ+I++ L +P + I C S + P++
Sbjct: 59 LLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNI 118
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTIL---PNHYTFPFLFKSLSAPCHFAQA 155
F +N IR FS S + S ++ M R+ P+H+T+P LFK + +
Sbjct: 119 FSWNVTIRGFSESENPKESFL---LYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
+ HVLKL +VHN+ + ++A+ + + R++FDE RD+VSW +I G++
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMEN-ARKVFDESPVRDLVSWNCLINGYKK 234
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
G+ + A+ ++ M+ GV P+ VTM+ +++C+ G + G +++++ NG + + L
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 276 GTALIDMYAKCGRVEEGVRVFSSV-------------------------------KEKNV 304
AL+DM++KCG + E R+F ++ +EK+V
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 305 FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGF 364
WNA+I G AK G++A+ LF M+ + DE+T++ LSAC+ G +D+G I +
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 365 LVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
+ KY NV +VD+ A+ G++ EA V
Sbjct: 415 I--EKYSLSLNVALGTSLVDMYAKCGNISEALSV 446
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 148/333 (44%), Gaps = 25/333 (7%)
Query: 122 SIFAHMHRNT-ILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVH---NSL 177
S+++H R T LP+H P + S + S+ L HL I N L
Sbjct: 22 SLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGL 81
Query: 178 LGVYAASPRLFSLCR-----------QLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAF 226
+ AS RL + C ++ + + ++ SW V I GF + ++ L +
Sbjct: 82 ILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLY 141
Query: 227 EQMQYAGVA---PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMY 283
+QM G P+ T CAD +G I + + EL + A I M+
Sbjct: 142 KQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMF 201
Query: 284 AKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLL 343
A CG +E +VF +++ +WN +I G E+AI ++ ME +GV+ D+VT++
Sbjct: 202 ASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMI 261
Query: 344 AVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMP 403
++S+C+ G ++ G++ + ++ E G + ++D+ ++ G + EA + +
Sbjct: 262 GLVSSCSMLGDLNRGKEFYEYVKEN--GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 404 FDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE 436
T W +++ G L+ V+RKL +
Sbjct: 320 -KRTIVSWTTMISGYARCGLLD----VSRKLFD 347
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 236/399 (59%), Gaps = 7/399 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V +N++I ++ + ++ +L +F M + + P+ T + + +
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEAL---ELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ VH + G ++ + N+L+ +Y+ L + C LF+ + ++DV+SW +I G
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC-GLFERLPYKDVISWNTLIGG 341
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFI--RRNGWE 270
+ + + +ALL F++M +G PN VTM++ L ACA GA+++G WIH +I R G
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
L T+LIDMYAKCG +E +VF+S+ K++ +WNA+I G A+ + + LF+RM
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
+ G++ D++T + +LSAC+HSG++D+GR IF + + Y P ++HY CM+DLL SG
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ-DYKMTPKLEHYGCMIDLLGHSG 520
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSN 450
+EA E++ M +P +W SLL + K G++E E A L+++EP N YV LSN
Sbjct: 521 LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSN 580
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+YA GRW++V K R ++ D+ + K GCSS+E++ H
Sbjct: 581 IYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 619
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 248/525 (47%), Gaps = 41/525 (7%)
Query: 1 MISKCCSIDEPSTTLPFCSVLTFDYTLRMSGFSDRAVTLLKDFCHSRLHVQQIQAQLILH 60
M+ C + PS++ PF + + S + +++LL + C + ++ I AQ+I
Sbjct: 1 MMLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHN-CKTLQSLRIIHAQMIKI 59
Query: 61 NLQSNPTIAHHFITVC--QSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSHSHHHHNSL 118
L + I C H + P++ I+N++ R + S + +
Sbjct: 60 GLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSS---DPV 116
Query: 119 TPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLL 178
+ L ++ M +LPN YTFPF+ KS + F + Q +H HVLKLG D+YVH SL+
Sbjct: 117 SALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLI 176
Query: 179 GVYAASPRL------------------------------FSLCRQLFDEMTHRDVVSWTV 208
+Y + RL ++LFDE+ +DVVSW
Sbjct: 177 SMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNA 236
Query: 209 MIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG 268
MI G+ G + +AL F+ M V P+ TMV ++ACA SG++E+G +H +I +G
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG 296
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN 328
+ ++ + ALID+Y+KCG +E +F + K+V +WN +I G +EA+ LF
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 356
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
M + G ++VT+L++L AC H G +D+GR I ++ + G ++D+ A+
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 416
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG--DLEFSEFVARKLVELEPANSAYYV 446
G + A +V + + + W +++ G D F F + + ++P + +V
Sbjct: 417 CGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP-DDITFV 474
Query: 447 HLSNLYAEMGRWDDVEKV-RGMMKDRQLTKDLGCSSVEVEEQGHT 490
L + + G D + R M +D ++T L ++ GH+
Sbjct: 475 GLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 519
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/423 (33%), Positives = 240/423 (56%), Gaps = 34/423 (8%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+ P++F+FN LIR FS + + M ++ I P++ TFPFL K+ S
Sbjct: 77 IQNPNLFVFNLLIRCFSTGAEPSKAF---GFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYA------ASPRLFSL---------------- 190
+ H+ +++ G +D+YV NSL+ +YA A+ R+F
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 191 --------CRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
R++FDEM HR++ +W++MI G+ F+ A+ FE M+ GV N MV
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK 302
+ +++CA GA+E G ++++ ++ ++++LGTAL+DM+ +CG +E+ + VF + E
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
+ +W+++IKGLA+ +A+ F++M G +VT AVLSAC+H GLV+ G +I+
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+ + +G P ++HY C+VD+L R+G L EA + M P + G+LL + K
Sbjct: 374 ENM-KKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 423 DLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
+ E +E V L++++P +S YYV LSN+YA G+WD +E +R MMK++ + K G S +
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 492
Query: 483 EVE 485
E++
Sbjct: 493 EID 495
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 138/307 (44%), Gaps = 40/307 (13%)
Query: 146 LSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV------YAASPRLFSLCRQLFDEMT 199
L + F+ + +H +L+ + D++V + LL + + L +F ++
Sbjct: 19 LQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ 78
Query: 200 HRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAW 259
+ ++ + ++I F + A + QM + + P+ +T + A ++ V +G
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138
Query: 260 IHDFIRRNGWELDVVLGTALIDMYA-------------------------------KCGR 288
H I R G++ DV + +L+ MYA KCG
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGM 198
Query: 289 VEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
VE +F + +N+FTW+ +I G A E+AI LF M+++GV A+E +++V+S+
Sbjct: 199 VENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISS 258
Query: 349 CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTK 408
C H G ++ G + + ++V K N+ +VD+ R G + +A V +P +
Sbjct: 259 CAHLGALEFGERAYEYVV--KSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP-ETDS 315
Query: 409 AMWGSLL 415
W S++
Sbjct: 316 LSWSSII 322
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 237/405 (58%), Gaps = 18/405 (4%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNT-ILPNHYTFPFLFKSLSAPCHFAQAQ 156
+ ++N++I +S + H +L +F M + +L N T + + F++ +
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALL---LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
++H V+K G D +V N+L+ +Y+ ++ + ++F +M RD+V+W MI G+ +
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI-DIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 217 GKFDDALLAFEQMQ-----------YAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIR 265
+DALL +MQ + PN +T++ L +CA A+ G IH +
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 266 RNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIR 325
+N DV +G+AL+DMYAKCG ++ +VF + +KNV TWN +I + +G+EAI
Sbjct: 545 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 326 LFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
L M GV+ +EVT ++V +AC+HSG+VD G +IF ++++ YG P+ HYAC+VDL
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDL 663
Query: 386 LARSGSLREAFEVMRCMPFDPTKA-MWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAY 444
L R+G ++EA+++M MP D KA W SLL +S+ +LE E A+ L++LEP +++
Sbjct: 664 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASH 723
Query: 445 YVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
YV L+N+Y+ G WD +VR MK++ + K+ GCS +E ++ H
Sbjct: 724 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVH 768
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 163/351 (46%), Gaps = 10/351 (2%)
Query: 132 ILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHD-IYVHNSLLGVYAASPRLFSL 190
I P++Y FP L K+++ + +HAHV K G+ D + V N+L+ +Y F
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGD-FGA 151
Query: 191 CRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACAD 250
++FD ++ R+ VSW +I + K++ AL AF M V P+ T+V+ + AC++
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 251 SGAVE---MGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTW 307
E MG +H + R G EL+ + L+ MY K G++ + S +++ TW
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 270
Query: 308 NAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVE 367
N V+ L + EA+ M +GV DE T+ +VL AC+H ++ G+++ + ++
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 368 GKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVS-SKSQGDLE- 425
N + +VD+ + V M FD +W +++ S+++ D E
Sbjct: 331 NG-SLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQNEHDKEA 388
Query: 426 FSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKD 476
F+ + ANS + G + E + G + R L +D
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 241/452 (53%), Gaps = 16/452 (3%)
Query: 47 RLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPR--PHVFIFNSL 104
+LH++QI A L+ +L N + HHF++ R P + N++
Sbjct: 24 KLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTM 83
Query: 105 IRAFSHSHHHHNSLTP---LSIFAHMHRNTILP-NHYTFPFLFKSLSAPCHFAQAQSVHA 160
IRAFS S TP +F + RN+ LP N + F K +H
Sbjct: 84 IRAFSLSQ------TPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHG 137
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
+ G L D + +L+ +Y+ C+ +FDE+ RD VSW V+ + +
Sbjct: 138 KIFSDGFLSDSLLMTTLMDLYSTCENSTDACK-VFDEIPKRDTVSWNVLFSCYLRNKRTR 196
Query: 221 DALLAFEQMQY---AGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
D L+ F++M+ V P+ VT + AL ACA+ GA++ G +HDFI NG + L
Sbjct: 197 DVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSN 256
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
L+ MY++CG +++ +VF ++E+NV +W A+I GLA+ G+EAI FN M + G+
Sbjct: 257 TLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISP 316
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
+E TL +LSAC+HSGLV G F + G++ PN+ HY C+VDLL R+ L +A+
Sbjct: 317 EEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYS 376
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGR 457
+++ M P +W +LL + + GD+E E V L+EL+ + YV L N Y+ +G+
Sbjct: 377 LIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGK 436
Query: 458 WDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
W+ V ++R +MK++++ GCS++E++ H
Sbjct: 437 WEKVTELRSLMKEKRIHTKPGCSAIELQGTVH 468
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 205/315 (65%), Gaps = 3/315 (0%)
Query: 176 SLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQY-AGV 234
++L YA S + R++ + M +D+V+W +I + GK ++AL+ F ++Q +
Sbjct: 303 TMLDGYAISED-YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 235 APNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVR 294
N++T+V+ L+ACA GA+E+G WIH +I+++G ++ + +ALI MY+KCG +E+
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 295 VFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGL 354
VF+SV++++VF W+A+I GLA+ G EA+ +F +M++ V+ + VT V AC+H+GL
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 355 VDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSL 414
VD +F +E YG +P KHYAC+VD+L RSG L +A + + MP P+ ++WG+L
Sbjct: 482 VDEAESLF-HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGAL 540
Query: 415 LVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLT 474
L + K +L +E +L+ELEP N +V LSN+YA++G+W++V ++R M+ L
Sbjct: 541 LGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLK 600
Query: 475 KDLGCSSVEVEEQGH 489
K+ GCSS+E++ H
Sbjct: 601 KEPGCSSIEIDGMIH 615
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 194/400 (48%), Gaps = 45/400 (11%)
Query: 35 RAVTLLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHH-FITVCQSHXXXXXXXXXXXXXV 93
R ++L+ + C S ++Q +I S+P A F S +
Sbjct: 32 RHISLI-ERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMH---RNTILPNHYTFPFLFKSLSAPC 150
P+P+ F +N+LIRA++ LSI+A + + PN YTFPFL K+ +
Sbjct: 91 PKPNSFAWNTLIRAYASGPD-----PVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ QS+H +K D++V NSL+ Y + L S C+ +F + +DVVSW MI
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACK-VFTTIKEKDVVSWNSMI 204
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
GF G D AL F++M+ V + VTMV L+ACA +E G + +I N
Sbjct: 205 NGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN 264
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
+++ L A++DMY KCG +E+ R+F +++EK+ TW ++ G A+++ E A + N M
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Query: 331 ---------------EQDG-----------------VRADEVTLLAVLSACNHSGLVDMG 358
EQ+G ++ +++TL++ LSAC G +++G
Sbjct: 325 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
R I ++ K+G N + ++ + ++ G L ++ EV
Sbjct: 385 RWIHSYI--KKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 132/264 (50%), Gaps = 5/264 (1%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASP-RLFSLCRQLFDEMTHRDVVSWTVMIMG 212
Q + H H+++ G D Y + L + A S R++FDE+ + +W +I
Sbjct: 45 QLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRA 104
Query: 213 FRNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ + ++ AF M + PN+ T + A A+ ++ +G +H ++
Sbjct: 105 YASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS 164
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
DV + +LI Y CG ++ +VF+++KEK+V +WN++I G S ++A+ LF +ME
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ V+A VT++ VLSAC ++ GRQ+ ++ E + N+ M+D+ + GS
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV--NLTLANAMLDMYTKCGS 282
Query: 392 LREAFEVMRCMPFDPTKAMWGSLL 415
+ +A + M + W ++L
Sbjct: 283 IEDAKRLFDAME-EKDNVTWTTML 305
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 229/393 (58%), Gaps = 5/393 (1%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+N++I ++ + +L IF M + +T + + C + + +H
Sbjct: 130 WNTMIGLYTRNRMESEAL---DIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
+K ++YV +LL +YA + Q+F+ M + V+W+ M+ G+ ++
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCG-MIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 221 DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALI 280
+ALL + + Q + N+ T+ + + AC++ A+ G +H I ++G+ +V + ++ +
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305
Query: 281 DMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEV 340
DMYAKCG + E +FS V+EKN+ WN +I G A +E + LF +M+QDG+ +EV
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
T ++LS C H+GLV+ GR+ F L+ YG PNV HY+CMVD+L R+G L EA+E+++
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Query: 401 CMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDD 460
+PFDPT ++WGSLL S + +LE +E A KL ELEP N+ +V LSN+YA +W++
Sbjct: 425 SIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEE 484
Query: 461 VEKVRGMMKDRQLTKDLGCSSVEVEEQGHTSQV 493
+ K R +++D + K G S ++++++ HT V
Sbjct: 485 IAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSV 517
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 165/317 (52%), Gaps = 17/317 (5%)
Query: 93 VPRPHV--FIFNSLIRAFSHSHHHHNSLTP--LSIFAHMHRNTILPNHYTFPFLFKSL-- 146
+PR ++ F N LIR + S +S+ A + + P Y+ F ++L
Sbjct: 6 LPRMNILGFTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVH 65
Query: 147 ------SAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTH 200
+ +A++ H ++++ D+ + N L+ Y+ L RQ+FD M
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCG-FVELARQVFDGMLE 124
Query: 201 RDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACA-DSGAVEMGAW 259
R +VSW MI + +AL F +M+ G + T+ + L+AC + A+E
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK- 183
Query: 260 IHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKS 319
+H + +L++ +GTAL+D+YAKCG +++ V+VF S+++K+ TW++++ G K+
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 320 GEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHY 379
EEA+ L+ R ++ + ++ TL +V+ AC++ + G+Q+ + K GF NV
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC--KSGFGSNVFVA 301
Query: 380 ACMVDLLARSGSLREAF 396
+ VD+ A+ GSLRE++
Sbjct: 302 SSAVDMYAKCGSLRESY 318
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 3/204 (1%)
Query: 230 QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRV 289
+Y+ NR + L CA +GAV H I R E DV L LI+ Y+KCG V
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 112
Query: 290 EEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSAC 349
E +VF + E+++ +WN +I + EA+ +F M +G + E T+ +VLSAC
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
Query: 350 NHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA 409
+ +++ V K N+ ++DL A+ G +++A +V M D +
Sbjct: 173 GVNCDALECKKLHCLSV--KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSV 229
Query: 410 MWGSLLVSSKSQGDLEFSEFVARK 433
W S++ + E + + R+
Sbjct: 230 TWSSMVAGYVQNKNYEEALLLYRR 253
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 230/404 (56%), Gaps = 17/404 (4%)
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
F++N+LIRA +H L + R P+ +TFPF+ K+ + F++ + V
Sbjct: 115 FMWNTLIRACAHDVSRKEEAFML-YRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQV 173
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
H ++K G D+YV+N L+ +Y + L L R++FDEM R +VSW MI G+
Sbjct: 174 HCQIVKHGFGGDVYVNNGLIHLYGSCGCL-DLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 219 FDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRN---GWELDVVL 275
+D AL F +MQ + P+ TM + L+ACA G++ +G W H F+ R +DV++
Sbjct: 233 YDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 291
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM--EQD 333
+LI+MY KCG + +VF ++++++ +WNA+I G A EEA+ F+RM +++
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
VR + VT + +L ACNH G V+ GRQ F +V Y P ++HY C+VDL+AR+G +
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-DYCIEPALEHYGCIVDLIARAGYIT 410
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQG-DLEFSEFVARKLVELEPAN-------SAYY 445
EA +++ MP P +W SLL + +G +E SE +AR ++ + N S Y
Sbjct: 411 EAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAY 470
Query: 446 VHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
V LS +YA RW+DV VR +M + + K+ GCSS+E+ H
Sbjct: 471 VLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISH 514
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 151/325 (46%), Gaps = 18/325 (5%)
Query: 135 NHYTFPFLFKSLSAPC-HFAQAQSVHAHVLKLGHLHD---IYVHNSLLGVYAASPRLFSL 190
NH+ F SL+ C +Q + +HA L+ + + ++++ +L + ++S +
Sbjct: 46 NHHQRIF---SLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQL-SSSFSDVNY 101
Query: 191 CRQLFDEMTHRDVVSWTVMIMGF-RNAGKFDDALLAFEQMQYAG-VAPNRVTMVNALAAC 248
++FD + + W +I + + ++A + + +M G +P++ T L AC
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 249 ADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWN 308
A G +H I ++G+ DV + LI +Y CG ++ +VF + E+++ +WN
Sbjct: 162 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWN 221
Query: 309 AVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEG 368
++I L + A++LF M Q D T+ +VLSAC G + +G FL+
Sbjct: 222 SMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 280
Query: 369 -KYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE-- 425
+V ++++ + GSLR A +V + M A W ++++ + G E
Sbjct: 281 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEA 339
Query: 426 --FSEFVARKLVELEPANSAYYVHL 448
F + + K + P NS +V L
Sbjct: 340 MNFFDRMVDKRENVRP-NSVTFVGL 363
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 224/398 (56%), Gaps = 5/398 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P +V + ++I +S + H +LT +FA M R+ PN +TF + S
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALT---VFAEMMRSDGKPNEFTFATVLTSCIRASGL 169
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H ++K + I+V +SLL +YA + ++ R++F+ + RDVVS T +I G
Sbjct: 170 GLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE-AREIFECLPERDVVSCTAIIAG 228
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G ++AL F ++ G++PN VT + L A + ++ G H + R
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY 288
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM-E 331
VL +LIDMY+KCG + R+F ++ E+ +WNA++ G + G E + LF M +
Sbjct: 289 AVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRD 348
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ V+ D VTLLAVLS C+H + D G IF +V G+YG P +HY C+VD+L R+G
Sbjct: 349 EKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGR 408
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNL 451
+ EAFE ++ MP PT + GSLL + + ++ E V R+L+E+EP N+ YV LSNL
Sbjct: 409 IDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNL 468
Query: 452 YAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
YA GRW DV VR MM + +TK+ G S ++ E+ H
Sbjct: 469 YASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 148/283 (52%), Gaps = 11/283 (3%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
Q VHAH++K +L Y+ LL Y L R++ DEM ++VVSWT MI +
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLED-ARKVLDEMPEKNVVSWTAMISRYS 129
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
G +AL F +M + PN T L +C + + +G IH I + ++ +
Sbjct: 130 QTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF 189
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+G++L+DMYAK G+++E +F + E++V + A+I G A EEA+ +F+R+ +G
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG 249
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
+ + VT ++L+A + L+D G+Q ++ + F +++ ++D+ ++ G+L
Sbjct: 250 MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSY 307
Query: 395 AFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVEL 437
A + MP + T W ++LV G + R+++EL
Sbjct: 308 ARRLFDNMP-ERTAISWNAMLVGYSKHG-------LGREVLEL 342
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Query: 245 LAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNV 304
L AC D A+ G +H + + + L T L+ Y KC +E+ +V + EKNV
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 305 FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGF 364
+W A+I + EA+ +F M + + +E T VL++C + + +G+QI G
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 365 LVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMP 403
+V K+ + ++ + ++D+ A++G ++EA E+ C+P
Sbjct: 179 IV--KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/454 (32%), Positives = 235/454 (51%), Gaps = 67/454 (14%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNT-ILPNHYTFPFLFKSLSAPCHF 152
P P F+FN+L+R +S S HNS +++F M R + P+ ++F F+ K++
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNS---VAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL 122
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAA---------------SPRLFSL------- 190
+H LK G ++V +L+G+Y P L +
Sbjct: 123 RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC 182
Query: 191 --------CRQLFDEMTHRDVVSWTVMIMGFRNAGK------------------------ 218
R++FD+M R+ SW VM+ G+ AG+
Sbjct: 183 FRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIV 242
Query: 219 -------FDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
F+++ L F ++Q AG++PN V++ L+AC+ SG+ E G +H F+ + G+
Sbjct: 243 GIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSW 302
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKN-VFTWNAVIKGLALAKSGEEAIRLFNRM 330
V + ALIDMY++CG V VF ++EK + +W ++I GLA+ GEEA+RLFN M
Sbjct: 303 IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
GV D ++ +++L AC+H+GL++ G F + + Y P ++HY CMVDL RSG
Sbjct: 363 TAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEM-KRVYHIEPEIEHYGCMVDLYGRSG 421
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSN 450
L++A++ + MP PT +W +LL + S G++E +E V ++L EL+P NS V LSN
Sbjct: 422 KLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSN 481
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
YA G+W DV +R M +++ K S VEV
Sbjct: 482 AYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 127/332 (38%), Gaps = 66/332 (19%)
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAAS-PRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
+H +K G D Y L+ A S R+L D + ++ G+ +
Sbjct: 24 IHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSES 83
Query: 217 GKFDDALLAFEQMQYAG-VAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
+ +++ F +M G V P+ + + A + ++ G +H ++G E + +
Sbjct: 84 DEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFV 143
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIK----------------------- 312
GT LI MY CG VE +VF + + N+ WNAVI
Sbjct: 144 GTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNH 203
Query: 313 --------GLALAKSGEEAIRLFNRM-------------------------------EQD 333
G A E A R+F+ M ++
Sbjct: 204 TSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRA 263
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
G+ +EV+L VLSAC+ SG + G+ + GF+ + Y +I +V + ++D+ +R G++
Sbjct: 264 GMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN--ALIDMYSRCGNVP 321
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
A V M W S++ G E
Sbjct: 322 MARLVFEGMQEKRCIVSWTSMIAGLAMHGQGE 353
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 227/392 (57%), Gaps = 6/392 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + + +++ A++ + + L IF+ M + + P+ + + +
Sbjct: 182 LPERTIVSWTAIVSAYAQ---NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
Q +S+HA V+K+G + + SL +YA ++ + + LFD+M +++ W MI G
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV-ATAKILFDKMKSPNLILWNAMISG 297
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G +A+ F +M V P+ +++ +A++ACA G++E +++++ R+ + D
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
V + +ALIDM+AKCG VE VF +++V W+A+I G L EAI L+ ME+
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
GV ++VT L +L ACNHSG+V G F + + K P +HYAC++DLL R+G L
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKIN--PQQQHYACVIDLLGRAGHL 475
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
+A+EV++CMP P +WG+LL + K +E E+ A++L ++P+N+ +YV LSNLY
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLY 535
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
A WD V +VR MK++ L KD+GCS VEV
Sbjct: 536 AAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 567
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 196/386 (50%), Gaps = 10/386 (2%)
Query: 33 SDRAVTLLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXX 92
SD L D + ++QI A+L++ LQ + + I S
Sbjct: 20 SDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD- 78
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+PRP +F +N++IR +S ++H ++L ++++M + P+ +TFP L K+ S H
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALL---MYSNMQLARVSPDSFTFPHLLKACSGLSHL 135
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFD--EMTHRDVVSWTVMI 210
+ VHA V +LG D++V N L+ +YA RL S R +F+ + R +VSWT ++
Sbjct: 136 QMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS-ARTVFEGLPLPERTIVSWTAIV 194
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
+ G+ +AL F QM+ V P+ V +V+ L A ++ G IH + + G E
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
++ L +L MYAKCG+V +F +K N+ WNA+I G A EAI +F+ M
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
VR D +++ + +SAC G ++ R ++ ++ G+ + +V + ++D+ A+ G
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYV--GRSDYRDDVFISSALIDMFAKCG 372
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLV 416
S+ E ++ D +W +++V
Sbjct: 373 SV-EGARLVFDRTLDRDVVVWSAMIV 397
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 223/430 (51%), Gaps = 43/430 (10%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
+V +NSLI F + ++ L +F M + + P+ T + + ++ Q
Sbjct: 217 NVVSWNSLITCF---EQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ 273
Query: 157 SVHAHVLKLGHL-HDIYVHNSLLGVYAASPRL---------------------------- 187
VH V+K L +DI + N+ + +YA R+
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 188 --FSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNAL 245
R +F +M R+VVSW +I G+ G+ ++AL F ++ V P + N L
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 246 AACADSGAVEMGAWIH------DFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV 299
ACAD + +G H F ++G E D+ +G +LIDMY KCG VEEG VF +
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 300 KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGR 359
E++ +WNA+I G A G EA+ LF M + G + D +T++ VLSAC H+G V+ GR
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513
Query: 360 QIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSK 419
F + +G P HY CMVDLL R+G L EA ++ MP P +WGSLL + K
Sbjct: 514 HYFSSMTR-DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACK 572
Query: 420 SQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGC 479
++ ++VA KL+E+EP+NS YV LSN+YAE+G+W+DV VR M+ +TK GC
Sbjct: 573 VHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGC 632
Query: 480 SSVEVEEQGH 489
S +++ QGH
Sbjct: 633 SWIKI--QGH 640
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 166/366 (45%), Gaps = 41/366 (11%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P +NS++ F+ H L FA MH+ + N Y+F + + S
Sbjct: 112 MPERDQCTWNSMVSGFAQ---HDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDM 168
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ VH+ + K L D+Y+ ++L+ +Y+ + + +++FDEM R+VVSW +I
Sbjct: 169 NKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNV-NDAQRVFDEMGDRNVVSWNSLITC 227
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG-WEL 271
F G +AL F+ M + V P+ VT+ + ++ACA A+++G +H + +N
Sbjct: 228 FEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRN 287
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSS-------------------------------VK 300
D++L A +DMYAKC R++E +F S +
Sbjct: 288 DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMA 347
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
E+NV +WNA+I G EEA+ LF ++++ V + +L AC + +G Q
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQ 407
Query: 361 IFGFLVEGKYGFIPNVKHYA----CMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLV 416
+++ + F + ++D+ + G + E + V R M + W ++++
Sbjct: 408 AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMII 466
Query: 417 SSKSQG 422
G
Sbjct: 467 GFAQNG 472
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 37/322 (11%)
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VHA V+K G ++I++ N L+ Y+ L RQ+FD+M R++ +W ++ G G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLED-GRQVFDKMPQRNIYTWNSVVTGLTKLG 100
Query: 218 KFDDA-------------------------------LLAFEQMQYAGVAPNRVTMVNALA 246
D+A L F M G N + + L+
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 247 ACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFT 306
AC+ + G +H I ++ + DV +G+AL+DMY+KCG V + RVF + ++NV +
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 307 WNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
WN++I EA+ +F M + V DEVTL +V+SAC + +G+++ G +V
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 367 EGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFD----PTKAMWGSLLVSSKSQG 422
+ ++ VD+ A+ ++EA + MP T + G + +S
Sbjct: 281 KND-KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 423 DLEFSEFVARKLVELEPANSAY 444
L F++ R +V + Y
Sbjct: 340 RLMFTKMAERNVVSWNALIAGY 361
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 34/195 (17%)
Query: 259 WIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGL---- 314
++H + ++G+ ++ + LID Y+KCG +E+G +VF + ++N++TWN+V+ GL
Sbjct: 41 YVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLG 100
Query: 315 ---------------------------ALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLS 347
A EEA+ F M ++G +E + +VLS
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 348 ACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPT 407
AC SGL DM + + + K F+ +V + +VD+ ++ G++ +A V M D
Sbjct: 161 AC--SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRN 217
Query: 408 KAMWGSLLVSSKSQG 422
W SL+ + G
Sbjct: 218 VVSWNSLITCFEQNG 232
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 227/382 (59%), Gaps = 7/382 (1%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P F++N+++R++ H + L + ++ M R+T+LP+ Y+ P + K+ F
Sbjct: 80 PIAFLWNNIMRSYIR---HESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLG 136
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
+ +H+ ++LG + D + + + +Y + F R++FDE R + SW +I G +
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFITLYCKAGE-FENARKVFDENPERKLGSWNAIIGGLNH 195
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE--LDV 273
AG+ ++A+ F M+ +G+ P+ TMV+ A+C G + + +H + + E D+
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
++ +LIDMY KCGR++ +F ++++NV +W+++I G A + EA+ F +M +
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
GVR +++T + VLSAC H GLV+ G+ F +++ ++ P + HY C+VDLL+R G L+
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYA 453
EA +V+ MP P +WG L+ + GD+E +E+VA +VELEP N YV L+N+YA
Sbjct: 375 EAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYA 434
Query: 454 EMGRWDDVEKVRGMMKDRQLTK 475
G W DVE+VR +MK +++ K
Sbjct: 435 LRGMWKDVERVRKLMKTKKVAK 456
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 233/399 (58%), Gaps = 14/399 (3%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P+ +V + ++I A+S H +L L + M R+ + PN YT+ + +S +
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVL---MLRDNVRPNVYTYSSVLRSCNG---M 175
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYA--ASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ + +H ++K G D++V ++L+ V+A P +FDEM D + W +I
Sbjct: 176 SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP---EDALSVFDEMVTGDAIVWNSII 232
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
GF + D AL F++M+ AG + T+ + L AC +E+G H I + ++
Sbjct: 233 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YD 290
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
D++L AL+DMY KCG +E+ +RVF+ +KE++V TW+ +I GLA +EA++LF RM
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
+ G + + +T++ VL AC+H+GL++ G F + + YG P +HY CM+DLL ++G
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM-KKLYGIDPVREHYGCMIDLLGKAG 409
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSN 450
L +A +++ M +P W +LL + + Q ++ +E+ A+K++ L+P ++ Y LSN
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+YA +WD VE++R M+DR + K+ GCS +EV +Q H
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIH 508
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 117/237 (49%), Gaps = 8/237 (3%)
Query: 166 GHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLA 225
GH +++ N L+ +Y L + QLFD+M R+V+SWT MI + AL
Sbjct: 91 GHRPMMFLVNVLINMYVKF-NLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALEL 149
Query: 226 FEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAK 285
M V PN T + L +C V M +H I + G E DV + +ALID++AK
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAK 206
Query: 286 CGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAV 345
G E+ + VF + + WN++I G A + A+ LF RM++ G A++ TL +V
Sbjct: 207 LGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV 266
Query: 346 LSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
L AC L+++G Q +V+ I N +VD+ + GSL +A V M
Sbjct: 267 LRACTGLALLELGMQAHVHIVKYDQDLILN----NALVDMYCKCGSLEDALRVFNQM 319
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 8/210 (3%)
Query: 222 ALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALID 281
A+ A + +Q G+ + T + C + AV G I + NG + L LI+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 282 MYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVT 341
MY K + + ++F + ++NV +W +I + K ++A+ L M +D VR + T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 342 LLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRC 401
+VL +CN G+ D+ G + E G +V + ++D+ A+ G +A V
Sbjct: 165 YSSVLRSCN--GMSDVRMLHCGIIKE---GLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 402 MPFDPTKAMWGSLL--VSSKSQGDLEFSEF 429
M +W S++ + S+ D+ F
Sbjct: 220 M-VTGDAIVWNSIIGGFAQNSRSDVALELF 248
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 258/488 (52%), Gaps = 39/488 (7%)
Query: 36 AVTLLKDFCHSRLHVQQIQAQLILHNL-QSNPTIAHHFITVCQSHXXXXXXXXXXXXXVP 94
A ++L+ C S + +I LI L + P ++ S +
Sbjct: 10 AKSILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLS 69
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
P + +N +IR FS+S + S+ S++ M R +LP+H T+PFL KS S +
Sbjct: 70 DPPNYGWNFVIRGFSNSRNPEKSI---SVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKL 126
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVY------AASPRLFS------------------- 189
S+H V+K G D+++ N+L+ +Y A++ +LF
Sbjct: 127 GGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAK 186
Query: 190 -----LCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP-NRVTMVN 243
R +FDEM+ RDVV+W+ MI G+ G+++ AL F+QM G + N VTMV+
Sbjct: 187 SGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVS 246
Query: 244 ALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVF--SSVKE 301
+ ACA GA+ G +H +I L V+L T+LIDMYAKCG + + VF +SVKE
Sbjct: 247 VICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE 306
Query: 302 KNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQI 361
+ WNA+I GLA E+++LF++M + + DE+T L +L+AC+H GLV
Sbjct: 307 TDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHF 366
Query: 362 FGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQ 421
F L E G P +HYACMVD+L+R+G +++A + + MP PT +M G+LL +
Sbjct: 367 FKSLKES--GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINH 424
Query: 422 GDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSS 481
G+LE +E V +KL+EL+P N YV L+N+YA ++ +R M+ + + K G S
Sbjct: 425 GNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSI 484
Query: 482 VEVEEQGH 489
++++ H
Sbjct: 485 LDLDGTRH 492
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/450 (32%), Positives = 235/450 (52%), Gaps = 72/450 (16%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTP---LSIFAHMHRNTILPNHYTFPFLFKSLSAP 149
+ P+ F NS+IRA++ NS TP L++F M + P+ Y+F F+ K+ +A
Sbjct: 100 IGSPNGFTHNSVIRAYA------NSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAF 153
Query: 150 CHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAAS------------------------- 184
C F + + +H +K G + D++V N+L+ VY S
Sbjct: 154 CGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 213
Query: 185 -----PRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM---------- 229
L R LFDEM R+V SW MI G+ AG +A F+ M
Sbjct: 214 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 273
Query: 230 ---QYAGVA-------------------PNRVTMVNALAACADSGAVEMGAWIHDFIRRN 267
YA V P+ T+V+ L+ACA G++ G W+H +I ++
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 268 GWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLF 327
G E++ L TAL+DMY+KCG++++ + VF + +++V TWN++I L++ G++A+ +F
Sbjct: 334 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 393
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA 387
+ M +G + + +T + VLSACNH G++D R++F ++ Y P ++HY CMVDLL
Sbjct: 394 SEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFE-MMSSVYRVEPTIEHYGCMVDLLG 452
Query: 388 RSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVH 447
R G + EA E++ +P D + SLL + K G LE +E +A +L+EL +S+ Y
Sbjct: 453 RMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQ 512
Query: 448 LSNLYAEMGRWDDVEKVRGMMKDRQLTKDL 477
+SNLYA GRW+ V R M+ ++ + L
Sbjct: 513 MSNLYASDGRWEKVIDGRRNMRAERVNRSL 542
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 129/307 (42%), Gaps = 31/307 (10%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASP--RLFSLCRQLFDEMTHRDVVSWTVM 209
+ Q HA +LK G HD + + L+ A +P + S + + + + + +
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
I + N+ + AL F +M V P++ + L ACA E G IH ++G
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGL 171
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
DV + L+++Y + G E +V + ++ +WN+++ +EA LF+
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
ME+ V + ++S +GLV +++F + + +V + MV A
Sbjct: 232 MEERNVESWNF----MISGYAAAGLVKEAKEVFDSMP------VRDVVSWNAMVTAYAHV 281
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVS---------SKSQGD----------LEFSEFV 430
G E EV M D T+ G LVS S SQG+ +E F+
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFL 341
Query: 431 ARKLVEL 437
A LV++
Sbjct: 342 ATALVDM 348
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 222/389 (57%), Gaps = 5/389 (1%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+++++ +S + SL + +F+ M I P+ YT + + S C+ + + +H+
Sbjct: 290 WSAMVTGYSQ---NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHS 346
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
+LKLG ++ +L+ +YA + L R+ FD + RDV WT +I G+ +
Sbjct: 347 FLLKLGFERHLFATTALVDMYAKAGCLAD-ARKGFDCLQERDVALWTSLISGYVQNSDNE 405
Query: 221 DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALI 280
+AL+ + +M+ AG+ PN TM + L AC+ +E+G +H ++G+ L+V +G+AL
Sbjct: 406 EALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALS 465
Query: 281 DMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEV 340
MY+KCG +E+G VF K+V +WNA+I GL+ G+EA+ LF M +G+ D+V
Sbjct: 466 TMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDV 525
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
T + ++SAC+H G V+ G F + + + G P V HYACMVDLL+R+G L+EA E +
Sbjct: 526 TFVNIISACSHKGFVERGWFYFNMMSD-QIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
Query: 401 CMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDD 460
D +W LL + K+ G E + KL+ L S+ YV LS +Y +GR D
Sbjct: 585 SANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRD 644
Query: 461 VEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
VE+V M+ ++K++GCS +E++ Q H
Sbjct: 645 VERVWKHMRANGVSKEVGCSWIELKNQYH 673
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 176/340 (51%), Gaps = 8/340 (2%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V +NSLI +S + +S T + +F M ILPN YT +FK+ S+ +
Sbjct: 80 VVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQ 139
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
HA V+K+ DIYV SL+G+Y + L ++F M R+ +W+ M+ G+ G
Sbjct: 140 AHALVVKMSSFGDIYVDTSLVGMYCKAG-LVEDGLKVFAYMPERNTYTWSTMVSGYATRG 198
Query: 218 KFDDALLAFE---QMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
+ ++A+ F + + G + V L++ A + V +G IH +NG V
Sbjct: 199 RVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA 257
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
L AL+ MY+KC + E ++F S ++N TW+A++ G + EA++LF+RM G
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
++ E T++ VL+AC+ ++ G+Q+ FL+ K GF ++ +VD+ A++G L +
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLL--KLGFERHLFATTALVDMYAKAGCLAD 375
Query: 395 AFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKL 434
A + C+ + A+W SL+ D E + + R++
Sbjct: 376 ARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEALILYRRM 414
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 182/355 (51%), Gaps = 9/355 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + + +++++ ++ ++ ++F + + Y F + SL+A +
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR-EKEEGSDSDYVFTAVLSSLAATIYV 237
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H +K G L + + N+L+ +Y+ L C+ +FD R+ ++W+ M+ G
Sbjct: 238 GLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACK-MFDSSGDRNSITWSAMVTG 296
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G+ +A+ F +M AG+ P+ T+V L AC+D +E G +H F+ + G+E
Sbjct: 297 YSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ TAL+DMYAK G + + + F ++E++V W ++I G EEA+ L+ RM+
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT 416
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
G+ ++ T+ +VL AC+ +++G+Q+ G + K+GF V + + + ++ GSL
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTI--KHGFGLEVPIGSALSTMYSKCGSL 474
Query: 393 REAFEVMRCMPFDPTKAMWGSLL--VSSKSQGDLEFSEFVARKLVE-LEPANSAY 444
+ V R P + W +++ +S QGD E E L E +EP + +
Sbjct: 475 EDGNLVFRRTP-NKDVVSWNAMISGLSHNGQGD-EALELFEEMLAEGMEPDDVTF 527
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 141/293 (48%), Gaps = 20/293 (6%)
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ ++VH +++ G I N L+ YA +L + +F+ + +DVVSW +I
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL-AKAHSIFNAIICKDVVSWNSLI 87
Query: 211 MGFRNAGKFDDA---LLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRN 267
G+ G + + F +M+ + PN T+ A + + +G H + +
Sbjct: 88 TGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 268 GWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLF 327
D+ + T+L+ MY K G VE+G++VF+ + E+N +TW+ ++ G A EEAI++F
Sbjct: 148 SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 328 N---RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD 384
N R +++G +D V AVLS+ + V +GRQI + K G + V +V
Sbjct: 208 NLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITI--KNGLLGFVALSNALVT 264
Query: 385 LLARSGSLREAFEVMRCMPFDPT----KAMWGSLLVSSKSQGD-LEFSEFVAR 432
+ ++ SL EA C FD + W +++ G+ LE + +R
Sbjct: 265 MYSKCESLNEA-----CKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSR 312
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 16/234 (6%)
Query: 236 PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRV 295
P+ T++ L + + G +H I R G + L++ YAKCG++ + +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 296 FSSVKEKNVFTWNAVIKGLAL---AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHS 352
F+++ K+V +WN++I G + S ++LF M + + TL + A +
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 353 GLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWG 412
+GRQ +V K ++ +V + ++G + + +V MP + W
Sbjct: 132 QSSTVGRQAHALVV--KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWS 188
Query: 413 SLLVSSKSQGDLE-----FSEFVARKLVELEPANSAYYVHLSNL----YAEMGR 457
+++ ++G +E F+ F+ R+ E ++ + LS+L Y +GR
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFL-REKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 257/503 (51%), Gaps = 59/503 (11%)
Query: 44 CHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNS 103
C + ++ A +I +L + + + FIT C S + P+VF++N+
Sbjct: 783 CSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQ-MQEPNVFVYNA 841
Query: 104 LIRAF---------------------SHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPF- 141
L + F S S + ++SL S FA ++ + + F F
Sbjct: 842 LFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFG 901
Query: 142 --------LFKSLSAPCHFAQAQSVHAHVLKLGHLH------------DIYVHNSLLGVY 181
L SA +A+ V + + + D+ NSL
Sbjct: 902 FHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQM 961
Query: 182 AASPRLFSLC--------------RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFE 227
+ S C LF++M +D++SWT MI G+ ++ +A+ F
Sbjct: 962 SEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFY 1021
Query: 228 QMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCG 287
+M G+ P+ VTM ++ACA G +E+G +H + +NG+ LDV +G+AL+DMY+KCG
Sbjct: 1022 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 1081
Query: 288 RVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLS 347
+E + VF ++ +KN+F WN++I+GLA +EA+++F +ME + V+ + VT ++V +
Sbjct: 1082 SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 1141
Query: 348 ACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPT 407
AC H+GLVD GR+I+ +++ Y + NV+HY MV L +++G + EA E++ M F+P
Sbjct: 1142 ACTHAGLVDEGRRIYRSMID-DYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPN 1200
Query: 408 KAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGM 467
+WG+LL + +L +E KL+ LEP NS YY L ++YAE RW DV ++RG
Sbjct: 1201 AVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGR 1260
Query: 468 MKDRQLTKDL-GCSSVEVEEQGH 489
M++ + K G SS+ ++++ H
Sbjct: 1261 MRELGIEKICPGTSSIRIDKRDH 1283
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 242/492 (49%), Gaps = 52/492 (10%)
Query: 39 LLKDFCHSRLHVQQIQAQLIL-----HNLQSNPTIAHHFITV------CQSHXXXXXXXX 87
LLK C + H+ Q AQ I ++ + N A+ + +
Sbjct: 10 LLK-LCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYAT 68
Query: 88 XXXXXVPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLS 147
+ P F FN++IR + H +SL+ F M R ++ P+ +TFPF+FK+ +
Sbjct: 69 SVFRFITNPSTFCFNTIIRICTL--HEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 148 APCH--FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYA----------------------- 182
A + +++H L+ G L D++ N+L+ VY+
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 183 -------ASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA 235
R R+LFD M RD+VSW +I G+ +A+ F++M G+
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 236 PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRV 295
P+ V +V+ L+ACA SG + G IHD+ +R +D L T L+D YAKCG ++ + +
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 296 FSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLV 355
F +K +FTWNA+I GLA+ +GE + F +M G++ D VT ++VL C+HSGLV
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 356 DMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA----MW 411
D R +F + Y +KHY CM DLL R+G + EA E++ MP D W
Sbjct: 367 DEARNLFDQM-RSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 412 GSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMM-KD 470
LL + G++E +E A ++ L P + Y + +YA RW++V KVR ++ +D
Sbjct: 426 SGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRD 485
Query: 471 RQLTKDLGCSSV 482
+++ K++G S V
Sbjct: 486 KKVKKNVGFSKV 497
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 215/397 (54%), Gaps = 6/397 (1%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V +NS+ +A+S + ++ M R P+ TF L S P Q +
Sbjct: 221 VVSWNSMFKAYSV---FGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRL 277
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
+H+H + LG DI N+ + +Y+ S S R LFD MT R VSWTVMI G+ G
Sbjct: 278 IHSHAIHLGTDQDIEAINTFISMYSKSEDTCS-ARLLFDIMTSRTCVSWTVMISGYAEKG 336
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD-VVLG 276
D+AL F M +G P+ VT+++ ++ C G++E G WI G + D V++
Sbjct: 337 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 396
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
ALIDMY+KCG + E +F + EK V TW +I G AL EA++LF++M +
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK 456
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
+ +T LAVL AC HSG ++ G + F +++ Y P + HY+CMVDLL R G L EA
Sbjct: 457 PNHITFLAVLQACAHSGSLEKGWEYF-HIMKQVYNISPGLDHYSCMVDLLGRKGKLEEAL 515
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMG 456
E++R M P +WG+LL + K +++ +E A L LEP +A YV ++N+YA G
Sbjct: 516 ELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAG 575
Query: 457 RWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHTSQV 493
WD ++R +MK R + K G S ++V + H+ V
Sbjct: 576 MWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTV 612
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 145/316 (45%), Gaps = 8/316 (2%)
Query: 113 HHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIY 172
+ ++ + L +F M R PN++TFPF+ K+ + + VHAH++K D++
Sbjct: 29 NRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVF 88
Query: 173 VHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYA 232
V + + ++ + ++F+ M RD +W M+ GF +G D A F +M+
Sbjct: 89 VGTATVDMFVKCNSV-DYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLN 147
Query: 233 GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEG 292
+ P+ VT++ + + + ++++ +H R G ++ V + I Y KCG ++
Sbjct: 148 EITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSA 207
Query: 293 VRVFSSVK--EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACN 350
VF ++ ++ V +WN++ K ++ +A L+ M ++ + D T + + ++C
Sbjct: 208 KLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQ 267
Query: 351 HSGLVDMGRQIFGFLVE-GKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA 409
+ + GR I + G I + + M + S R F++M T
Sbjct: 268 NPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMT----SRTCV 323
Query: 410 MWGSLLVSSKSQGDLE 425
W ++ +GD++
Sbjct: 324 SWTVMISGYAEKGDMD 339
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 151/349 (43%), Gaps = 10/349 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P +N+++ F S H + S+F M N I P+ T L +S S
Sbjct: 113 MPERDATTWNAMLSGFCQSGHTDKAF---SLFREMRLNEITPDSVTVMTLIQSASFEKSL 169
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTH--RDVVSWTVMI 210
+++HA ++LG + V N+ + Y L S + +F+ + R VVSW M
Sbjct: 170 KLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS-AKLVFEAIDRGDRTVVSWNSMF 228
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
+ G+ DA + M P+ T +N A+C + + G IH G +
Sbjct: 229 KAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD 288
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
D+ I MY+K +F + + +W +I G A +EA+ LF+ M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFI-PNVKHYACMVDLLARS 389
+ G + D VTLL+++S C G ++ G+ I YG NV ++D+ ++
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA--RADIYGCKRDNVMICNALIDMYSKC 406
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELE 438
GS+ EA ++ P + T W +++ G + + K+++L+
Sbjct: 407 GSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 6/160 (3%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACA-- 249
R+L+ V +W + I N ++LL F +M+ G PN T ACA
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 250 -DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWN 308
D G EM +H + ++ + DV +GTA +DM+ KC V+ +VF + E++ TWN
Sbjct: 66 ADVGCCEM---VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWN 122
Query: 309 AVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
A++ G + ++A LF M + + D VT++ ++ +
Sbjct: 123 AMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS 162
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 229/399 (57%), Gaps = 8/399 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+ P F FN++IR + + +L + M + P+++T+P L K+ +
Sbjct: 92 IDDPCTFDFNTMIRGYVNVMSFEEALC---FYNEMMQRGNEPDNFTYPCLLKACTRLKSI 148
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ + +H V KLG D++V NSL+ +Y + L +F+++ + SW+ M+
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEM-ELSSAVFEKLESKTAASWSSMVSA 207
Query: 213 FRNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G + + LL F M + MV+AL ACA++GA+ +G IH F+ RN EL
Sbjct: 208 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 267
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
++++ T+L+DMY KCG +++ + +F ++++N T++A+I GLAL GE A+R+F++M
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFG-FLVEGKYGFIPNVKHYACMVDLLARSG 390
++G+ D V ++VL+AC+HSGLV GR++F L EGK P +HY C+VDLL R+G
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVE--PTAEHYGCLVDLLGRAG 385
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSN 450
L EA E ++ +P + +W + L + + ++E + A++L++L N Y+ +SN
Sbjct: 386 LLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISN 445
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
LY++ WDDV + R + + L + G S VE++ + H
Sbjct: 446 LYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTH 484
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/395 (34%), Positives = 213/395 (53%), Gaps = 8/395 (2%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P + +N++I ++ + SL S+F + + T L + H
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSL---SLFKELMLSGARLRSSTLVSL---VPVSGHLML 337
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
++H + LK L V +L VY+ + S R+LFDE + + SW MI G+
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES-ARKLFDESPEKSLPSWNAMISGYT 396
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
G +DA+ F +MQ + +PN VT+ L+ACA GA+ +G W+HD +R +E +
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+ TALI MYAKCG + E R+F + +KN TWN +I G L G+EA+ +F M G
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 516
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
+ VT L VL AC+H+GLV G +IF ++ +YGF P+VKHYACMVD+L R+G L+
Sbjct: 517 ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH-RYGFEPSVKHYACMVDILGRAGHLQR 575
Query: 395 AFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAE 454
A + + M +P ++W +LL + + D + V+ KL EL+P N Y+V LSN+++
Sbjct: 576 ALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSA 635
Query: 455 MGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+ VR K R+L K G + +E+ E H
Sbjct: 636 DRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 670
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 174/382 (45%), Gaps = 19/382 (4%)
Query: 49 HVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAF 108
H+ Q AQ+ILH +++ ++ +T S V RP VF+FN L+R F
Sbjct: 35 HLAQTHAQIILHGFRNDISLLTK-LTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGF 93
Query: 109 SHSHHHHNSLTPLSIFAHMHRNTIL-PNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGH 167
S + H+SL S+FAH+ ++T L PN T+ F + S + +H + G
Sbjct: 94 SVNESPHSSL---SVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGC 150
Query: 168 LHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFE 227
++ + ++++ +Y R+ R++FD M +D + W MI G+R + +++ F
Sbjct: 151 DSELLLGSNIVKMYFKFWRVED-ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFR 209
Query: 228 QM-QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG-WELDVVLGTALIDMYAK 285
+ + + T+++ L A A+ + +G IH + G + D VL T I +Y+K
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL-TGFISLYSK 268
Query: 286 CGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAV 345
CG+++ G +F ++ ++ +NA+I G E ++ LF + G R TL+++
Sbjct: 269 CGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 346 LSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFD 405
+ H L+ I G+ ++ + + H + L L E +
Sbjct: 329 VPVSGHLMLI---YAIHGYCLKSNF-----LSHASVSTALTTVYSKLNEIESARKLFDES 380
Query: 406 PTKAM--WGSLLVSSKSQGDLE 425
P K++ W +++ G E
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTE 402
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/520 (31%), Positives = 257/520 (49%), Gaps = 74/520 (14%)
Query: 44 CHSRLHVQQIQAQLILHNLQSNPTIAHHFI-TVCQSHXXXXXXXXXXXXXVPRPHVFIFN 102
C + ++QI A ++++ L SN ++ I + S +P+P V I N
Sbjct: 22 CKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICN 81
Query: 103 SLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHV 162
++R + S ++ S++ M + + P+ YTF F+ K+ S + + H V
Sbjct: 82 HVLRGSAQSMKPEKTV---SLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 163 LKLGHLHDIYVHNSL---------LGV----------------------YAASPRLFSLC 191
++ G + + YV N+L LG+ YA ++
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 192 RQLFDEM-------------------------------THRDVVSWTVMIMGFRNAGKFD 220
R LFDEM T +DVV+W MI G+ N G
Sbjct: 199 R-LFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 221 DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW-ELDVVLGT-- 277
+AL F++M+ AG P+ VT+++ L+ACA G +E G +H +I + +GT
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 278 --ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
ALIDMYAKCG ++ + VF VK++++ TWN +I GLAL + E +I +F M++ V
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHA-EGSIEMFEEMQRLKV 376
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+EVT + V+ AC+HSG VD GR+ F L+ Y PN+KHY CMVD+L R+G L EA
Sbjct: 377 WPNEVTFIGVILACSHSGRVDEGRKYFS-LMRDMYNIEPNIKHYGCMVDMLGRAGQLEEA 435
Query: 396 FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEM 455
F + M +P +W +LL + K G++E ++ KL+ + S YV LSN+YA
Sbjct: 436 FMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYAST 495
Query: 456 GRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHTSQVLL 495
G+WD V+KVR M D ++ K G S +E ++ + LL
Sbjct: 496 GQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLL 535
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 236/399 (59%), Gaps = 11/399 (2%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKS-LSAPC---HFA 153
++++N+L RA + + H L ++ M+R + + +T+ ++ K+ +++ C H
Sbjct: 143 IYVWNALFRALTLAGHGEEVL---GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLM 199
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+ + +HAH+ + G+ +Y+ +L+ +YA +F M R+VVSW+ MI +
Sbjct: 200 KGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG-CVDYASYVFGGMPVRNVVSWSAMIACY 258
Query: 214 RNAGKFDDALLAFEQM--QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
GK +AL F +M + +PN VTMV+ L ACA A+E G IH +I R G +
Sbjct: 259 AKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDS 318
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+ + +AL+ MY +CG++E G RVF + +++V +WN++I + G++AI++F M
Sbjct: 319 ILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+G VT ++VL AC+H GLV+ G+++F + +G P ++HYACMVDLL R+
Sbjct: 379 ANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR-DHGIKPQIEHYACMVDLLGRANR 437
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNL 451
L EA ++++ M +P +WGSLL S + G++E +E +R+L LEP N+ YV L+++
Sbjct: 438 LDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADI 497
Query: 452 YAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
YAE WD+V++V+ +++ R L K G +EV + ++
Sbjct: 498 YAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYS 536
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 130/296 (43%), Gaps = 12/296 (4%)
Query: 134 PNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQ 193
P+ T+ L + A VH H+L G D ++ L+G+Y+ + R+
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSV-DYARK 133
Query: 194 LFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGA 253
+FD+ R + W + AG ++ L + +M GV +R T L AC S
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 254 ----VEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA 309
+ G IH + R G+ V + T L+DMYA+ G V+ VF + +NV +W+A
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 310 VIKGLALAKSGEEAIRLFNRM--EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLV- 366
+I A EA+R F M E + VT+++VL AC ++ G+ I G+++
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 367 EGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
G +P + + +V + R G L V M D W SL+ S G
Sbjct: 314 RGLDSILPVI---SALVTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVHG 365
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 127/314 (40%), Gaps = 53/314 (16%)
Query: 204 VSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDF 263
+S +I GK A+ Q +P++ T + C ++ +H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 264 IRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEA 323
I NG + D L T LI MY+ G V+ +VF +++ ++ WNA+ + L LA GEE
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 324 IRLFNRMEQDGVRADEVTLLAVLSAC-------NH-----------------------SG 353
+ L+ +M + GV +D T VL AC NH +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 354 LVDMGRQIFGFLVEGKYGF----IPNVKHYACMVDLLARSGSLREAFEVMRCMPFD---- 405
LVDM + FG + Y F + NV ++ M+ A++G EA R M +
Sbjct: 223 LVDMYAR-FGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS 281
Query: 406 -PTKAMWGSLLVSSKS-----QGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWD 459
P S+L + S QG L + R L + P SA L +Y G+ +
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA----LVTMYGRCGKLE 337
Query: 460 DVEKVRGMMKDRQL 473
++V M DR +
Sbjct: 338 VGQRVFDRMHDRDV 351
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 226/426 (53%), Gaps = 41/426 (9%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P P V FN +I ++ SL L ++ M + I P+ YT L
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGF---SLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDI 248
Query: 153 AQAQSVHAHVLKLGHLH--DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ VH + + G ++ ++ + N+LL +Y L ++ FD M +D+ SW M+
Sbjct: 249 RLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKE-SGLAKRAFDAMKKKDMRSWNTMV 307
Query: 211 MGFRNAGKFDDALLAFEQMQ---------------------------------YAGVAPN 237
+GF G + A F+QM V P+
Sbjct: 308 VGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPD 367
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS 297
RVTMV+ ++ A++G + G W+H + R + D L +ALIDMY KCG +E VF
Sbjct: 368 RVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFK 427
Query: 298 SVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDM 357
+ EK+V W ++I GLA +G++A++LF RM+++GV + VTLLAVL+AC+HSGLV+
Sbjct: 428 TATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEE 487
Query: 358 GRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE-VMRCMPFDPTKAMWGSLLV 416
G +F + + K+GF P +HY +VDLL R+G + EA + V + MP P+++MWGS+L
Sbjct: 488 GLHVFNHM-KDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILS 546
Query: 417 SSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKD 476
+ + D+E +E +L++LEP YV LSN+YA +GRW +K R M++R + K
Sbjct: 547 ACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKT 606
Query: 477 LGCSSV 482
G SSV
Sbjct: 607 AGYSSV 612
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 195/427 (45%), Gaps = 51/427 (11%)
Query: 35 RAVTLLKDFCHSRLHVQQIQAQLILHNL--QSNPTIAHHFITVCQSHXXXXXXXXXXXXX 92
+++ LL++ C+SR +Q+ AQ++ NL + P F +
Sbjct: 36 QSLVLLEN-CNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNF 94
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
P P+VF++N++I A S S + +++ M R+ + P+ TF +L K A
Sbjct: 95 TPNPNVFVYNTMISAVSSSKNE-----CFGLYSSMIRHRVSPDRQTFLYLMK---ASSFL 146
Query: 153 AQAQSVHAHVLKLGHLH-DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
++ + +H H++ G L Y+ NSL+ Y F + ++F M H DV S+ VMI+
Sbjct: 147 SEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGN-FGVAEKVFARMPHPDVSSFNVMIV 205
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG--W 269
G+ G +AL + +M G+ P+ T+++ L C + +G +H +I R G +
Sbjct: 206 GYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVY 265
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
+++L AL+DMY KC R F ++K+K++ +WN ++ G E A +F++
Sbjct: 266 SSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQ 325
Query: 330 MEQ---------------------------------DGVRADEVTLLAVLSACNHSGLVD 356
M + + V+ D VT+++++S ++G +
Sbjct: 326 MPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELS 385
Query: 357 MGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLV 416
GR + G ++ + + + ++D+ + G + AF V + + A+W S++
Sbjct: 386 HGRWVHGLVI--RLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT-EKDVALWTSMIT 442
Query: 417 SSKSQGD 423
G+
Sbjct: 443 GLAFHGN 449
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 131/293 (44%), Gaps = 20/293 (6%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAAS-PRLFSLCRQLFDEMT-HRDVVSWTVMIM 211
Q + V A +++ + D + + L+ A + P L + LF T + +V + MI
Sbjct: 49 QFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMIS 108
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG-WE 270
++ ++ + M V+P+R T + + A + V+ IH I +G
Sbjct: 109 AVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---IHCHIIVSGCLS 163
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
L L +L+ Y + G +VF+ + +V ++N +I G A EA++L+ +M
Sbjct: 164 LGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKM 223
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR-- 388
DG+ DE T+L++L C H + +G+ + G++ + N+ ++D+ +
Sbjct: 224 VSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCK 283
Query: 389 -SGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE-----FSEFVARKLV 435
SG + AF+ M+ W +++V GD+E F + R LV
Sbjct: 284 ESGLAKRAFDAMK----KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 223/393 (56%), Gaps = 9/393 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V + +I F+ + + +L S + + PN T+ + S
Sbjct: 167 MPVRDVVSWTGIITGFTRTGLYKEALDTFS------KMDVEPNLATYVCVLVSSGRVGCL 220
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ + +H +LK L + N+L+ +Y +L R +F E+ +D VSW MI G
Sbjct: 221 SLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMR-VFGELEKKDKVSWNSMISG 279
Query: 213 FRNAGKFDDALLAFEQMQYA-GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ + +A+ F MQ + G+ P+ + + L+ACA GAV+ G W+H++I G +
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW 339
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
D +GTA++DMYAKCG +E + +F+ ++ KNVFTWNA++ GLA+ G E++R F M
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ G + + VT LA L+AC H+GLVD GR+ F + +Y P ++HY CM+DLL R+G
Sbjct: 400 KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGL 459
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDL-EFSEFVARKLVELEPANSAYYVHLSN 450
L EA E+++ MP P + G++L + K++G L E + + +++E +S YV LSN
Sbjct: 460 LDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSN 519
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
++A RWDDV ++R +MK + ++K G S +E
Sbjct: 520 IFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 175/357 (49%), Gaps = 11/357 (3%)
Query: 44 CHSRLHVQQIQAQLILHNLQSNPTIAHHFIT-VCQSHXXXXXXXXXXXXXVPRPHVFIFN 102
C S +QIQ QLI +L + I + +T + +S F +N
Sbjct: 16 CSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYN 75
Query: 103 SLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHV 162
+L+ +++ ++ F N P+ +TFP +FK+ + + +H V
Sbjct: 76 TLLSSYAVCDKPRVTIFAYKTFVS---NGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 163 LKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDA 222
K+G DIYV NSL+ Y + C+ +F EM RDVVSWT +I GF G + +A
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACK-VFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 223 LLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDM 282
L F +M V PN T V L + G + +G IH I + + + G ALIDM
Sbjct: 192 LDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDM 248
Query: 283 YAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME-QDGVRADEVT 341
Y KC ++ + +RVF +++K+ +WN++I GL + +EAI LF+ M+ G++ D
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 342 LLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
L +VLSAC G VD GR + +++ + ++ +VD+ A+ G + A E+
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIG--TAIVDMYAKCGYIETALEI 363
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 91/211 (43%), Gaps = 6/211 (2%)
Query: 205 SWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFI 264
S+ ++ + K + A++ G +P+ T AC + G IH +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 265 RRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAI 324
+ G+ D+ + +L+ Y CG +VF + ++V +W +I G +EA+
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD 384
F++M+ V + T + VL + G + +G+ I G ++ K + +++ ++D
Sbjct: 193 DTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLIL--KRASLISLETGNALID 247
Query: 385 LLARSGSLREAFEVMRCMPFDPTKAMWGSLL 415
+ + L +A V + K W S++
Sbjct: 248 MYVKCEQLSDAMRVFGELE-KKDKVSWNSMI 277
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 226/393 (57%), Gaps = 6/393 (1%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V +F ++I + H+ + +SL +F + + I PN T + + +
Sbjct: 406 VVVFTAMISGYLHNGLYIDSL---EMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE 462
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
+H ++K G + + +++ +YA R+ +L ++F+ ++ RD+VSW MI +
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRM-NLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
A+ F QM +G+ + V++ AL+ACA+ + G IH F+ ++ DV +
Sbjct: 522 NPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSES 581
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM-EQDGVR 336
LIDMYAKCG ++ + VF ++KEKN+ +WN++I ++++ LF+ M E+ G+R
Sbjct: 582 TLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIR 641
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
D++T L ++S+C H G VD G + F + E YG P +HYAC+VDL R+G L EA+
Sbjct: 642 PDQITFLEIISSCCHVGDVDEGVRFFRSMTE-DYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMG 456
E ++ MPF P +WG+LL + + ++E +E + KL++L+P+NS YYV +SN +A
Sbjct: 701 ETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAR 760
Query: 457 RWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
W+ V KVR +MK+R++ K G S +E+ ++ H
Sbjct: 761 EWESVTKVRSLMKEREVQKIPGYSWIEINKRTH 793
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 213/439 (48%), Gaps = 22/439 (5%)
Query: 3 SKCCSIDEPSTTLPFCSVLTFDYTLRMSGFSDRAVTL--LKDFCHSRLHVQ---QIQAQL 57
+KC ++D SV+ +RM S AVT + C S+L + Q+ +
Sbjct: 215 AKCGALD---------SVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLV 265
Query: 58 ILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSHSHHHHNS 117
++ + +I + +++ S + R +N +I + S S
Sbjct: 266 VVSGVDFEGSIKNSLLSM-YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEES 324
Query: 118 LTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSL 177
LT F M + +LP+ TF L S+S + + +H ++++ DI++ ++L
Sbjct: 325 LT---FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSAL 381
Query: 178 LGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
+ Y R S+ + +F + DVV +T MI G+ + G + D+L F + ++PN
Sbjct: 382 IDAYFKC-RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS 297
+T+V+ L A+++G +H FI + G++ +G A+IDMYAKCGR+ +F
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 298 SVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDM 357
+ ++++ +WN++I A + + AI +F +M G+ D V++ A LSAC +
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESF 560
Query: 358 GRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVS 417
G+ I GF++ K+ +V + ++D+ A+ G+L+ A V + M + W S++ +
Sbjct: 561 GKAIHGFMI--KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAA 617
Query: 418 SKSQGDLEFSEFVARKLVE 436
+ G L+ S + ++VE
Sbjct: 618 CGNHGKLKDSLCLFHEMVE 636
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 133/272 (48%), Gaps = 4/272 (1%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
R + +NS+I +F + + +L + + M + P+ TFP L K+ A +F
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQAL---AFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+ V LG + +V +SL+ Y ++ + +LFD + +D V W VM+ G+
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKI-DVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
G D + F M+ ++PN VT L+ CA +++G +H + +G + +
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+ +L+ MY+KCGR ++ ++F + + TWN +I G + EE++ F M G
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
V D +T ++L + + ++ +QI +++
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 6/289 (2%)
Query: 141 FLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTH 200
L ++ S P Q + VHA ++ D Y +LG+YA FS C ++F +
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGS-FSDCGKMFYRLDL 98
Query: 201 R--DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGA 258
R + W +I F G + AL + +M GV+P+ T + AC +
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 259 WIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAK 318
++ D + G + + + ++LI Y + G+++ ++F V +K+ WN ++ G A
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 319 SGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKH 378
+ + I+ F+ M D + + VT VLS C L+D+G Q+ G +V F ++K+
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 379 YACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS 427
++ + ++ G +A ++ R M T W ++ G +E S
Sbjct: 279 --SLLSMYSKCGRFDDASKLFRMMSRADT-VTWNCMISGYVQSGLMEES 324
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 223/389 (57%), Gaps = 5/389 (1%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+N+++ ++ SH H +L +FA MH+ + +T +FK+ Q + VHA
Sbjct: 485 WNAMMAGYTQSHDGHKTL---KLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
+ +K G+ D++V + +L +Y + S + FD + D V+WT MI G G+ +
Sbjct: 542 YAIKSGYDLDLWVSSGILDMYVKCGDM-SAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 221 DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALI 280
A F QM+ GV P+ T+ A + A+E G IH + D +GT+L+
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 281 DMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEV 340
DMYAKCG +++ +F ++ N+ WNA++ GLA G+E ++LF +M+ G++ D+V
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
T + VLSAC+HSGLV + + G YG P ++HY+C+ D L R+G +++A ++
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHMRSM-HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIE 779
Query: 401 CMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDD 460
M + + +M+ +LL + + QGD E + VA KL+ELEP +S+ YV LSN+YA +WD+
Sbjct: 780 SMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDE 839
Query: 461 VEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
++ R MMK ++ KD G S +EV+ + H
Sbjct: 840 MKLARTMMKGHKVKKDPGFSWIEVKNKIH 868
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 8/337 (2%)
Query: 106 RAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKL 165
+ S H L FA M + + + TF + + A Q VH LKL
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 166 GHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLA 225
G + V NSL+ +Y R F R +FD M+ RD++SW +I G G +A+
Sbjct: 345 GLDLMLTVSNSLINMYC-KLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 226 FEQMQYAGVAPNRVTMVNAL-AACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYA 284
F Q+ G+ P++ TM + L AA + + + +H + D + TALID Y+
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 285 KCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLA 344
+ R + + ++ WNA++ G + G + ++LF M + G R+D+ TL
Sbjct: 464 R-NRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 345 VLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPF 404
V C ++ G+Q+ + + K G+ ++ + ++D+ + G + A +P
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAI--KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 405 DPTKAMWGSLLVSSKSQGDLE--FSEFVARKLVELEP 439
P W +++ G+ E F F +L+ + P
Sbjct: 581 -PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 140/302 (46%), Gaps = 6/302 (1%)
Query: 123 IFAHMHRNTILPNHYTFPFLFKSLSA-PCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVY 181
+F + R + P+ YT + K+ S+ P + ++ VH H +K+ ++ D +V +L+ Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 182 AASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTM 241
+ + R LF E + D+V+W M+ G+ + L F M G + T+
Sbjct: 463 SRN-RCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 242 VNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE 301
C A+ G +H + ++G++LD+ + + ++DMY KCG + F S+
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 302 KNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQI 361
+ W +I G E A +F++M GV DE T+ + A + ++ GRQI
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 362 FGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQ 421
++ P V +VD+ A+ GS+ +A+ + + + A W ++LV
Sbjct: 641 HANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITA-WNAMLVGLAQH 697
Query: 422 GD 423
G+
Sbjct: 698 GE 699
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 7/209 (3%)
Query: 139 FPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEM 198
F FL ++++ + HA +L + ++ N+L+ +Y+ L + R++FD+M
Sbjct: 43 FGFLRNAITSS-DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSL-TYARRVFDKM 100
Query: 199 THRDVVSWTVMIMGFRNAGK-----FDDALLAFEQMQYAGVAPNRVTMVNALAACADSGA 253
RD+VSW ++ + + + A L F ++ V +R+T+ L C SG
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Query: 254 VEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKG 313
V H + + G + D + AL+++Y K G+V+EG +F + ++V WN ++K
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 314 LALAKSGEEAIRLFNRMEQDGVRADEVTL 342
EEAI L + G+ +E+TL
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLA-----LAKSGEEAIRLFNRMEQD 333
LI MY+KCG + RVF + ++++ +WN+++ A + ++ ++A LF + QD
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
V +TL +L C HSG V G+ K G + +V++ + G ++
Sbjct: 140 VVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC--KIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 394 EAFEVMRCMPFDPTKAMWGSLL 415
E + MP+ +W +L
Sbjct: 198 EGKVLFEEMPYRDV-VLWNLML 218
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHH--HNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPC 150
+P + +NS++ A++ S N +F + ++ + + T + K
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ ++S H + K+G D +V +L+ +Y ++ + LF+EM +RDVV W +M+
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKV-KEGKVLFEEMPYRDVVLWNLML 218
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTM 241
+ G ++A+ +G+ PN +T+
Sbjct: 219 KAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/447 (34%), Positives = 237/447 (53%), Gaps = 12/447 (2%)
Query: 43 FCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQ-SHXXXXXXXXXXXXXVPRPHVFIF 101
C S H+ QI Q+ L +LQ++ I + V S +
Sbjct: 22 LCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTW 81
Query: 102 NSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAH 161
N L R +S S + + + +++ M R I PN TFPFL K+ ++ + +
Sbjct: 82 NMLSRGYSSSD---SPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 162 VLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDD 221
VLK G D+YV N+L+ +Y + S R++FDEMT R+VVSW ++ GK +
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKT-SDARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 222 ALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALID 281
F +M P+ TMV L+AC G + +G +H + EL+ LGTAL+D
Sbjct: 198 VFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVD 255
Query: 282 MYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR-MEQDGVRADEV 340
MYAK G +E VF + +KNV+TW+A+I GLA EEA++LF++ M++ VR + V
Sbjct: 256 MYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYV 315
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
T L VL AC+H+GLVD G + F + E + P + HY MVD+L R+G L EA++ ++
Sbjct: 316 TFLGVLCACSHTGLVDDGYKYFHEM-EKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIK 374
Query: 401 CMPFDPTKAMWGSLLVSSK---SQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGR 457
MPF+P +W +LL + + D E V ++L+ELEP S V ++N +AE
Sbjct: 375 KMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARM 434
Query: 458 WDDVEKVRGMMKDRQLTKDLGCSSVEV 484
W + +VR +MK+ ++ K G S +E+
Sbjct: 435 WAEAAEVRRVMKETKMKKIAGESCLEL 461
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 204/353 (57%), Gaps = 36/353 (10%)
Query: 164 KLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD--- 220
++ H+ D+ ++N+++ + S + S R+LFDEMTH+ V++WT MI G+ N D
Sbjct: 169 QMPHVKDVVIYNAMMDGFVKSGDMTS-ARRLFDEMTHKTVITWTTMIHGYCNIKDIDAAR 227
Query: 221 ----------------------------DALLAFEQMQ-YAGVAPNRVTMVNALAACADS 251
+ + F++MQ + P+ VT+++ L A +D+
Sbjct: 228 KLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT 287
Query: 252 GAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVI 311
GA+ +G W H F++R + V + TA++DMY+KCG +E+ R+F + EK V +WNA+I
Sbjct: 288 GALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMI 347
Query: 312 KGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG 371
G AL + A+ LF M + + DE+T+LAV++ACNH GLV+ GR+ F + E G
Sbjct: 348 HGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMRE--MG 404
Query: 372 FIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVA 431
++HY CMVDLL R+GSL+EA +++ MPF+P + S L + D+E +E +
Sbjct: 405 LNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERIL 464
Query: 432 RKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
+K VELEP N YV L NLYA RWDD V+ +M+ Q K++GCS +E+
Sbjct: 465 KKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEI 517
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 168/362 (46%), Gaps = 18/362 (4%)
Query: 57 LILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSHSHHHHN 116
++ H +++N I F+ + S R F+ NS+I+A+ + + +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 117 SLTPLSIFAHMHRNTIL-PNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHN 175
S +++ + + T P+++TF L KS S Q +H+ + + G D+YV
Sbjct: 61 SF---ALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVST 117
Query: 176 SLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA 235
++ +YA ++ R FDEM HR VSWT +I G+ G+ D A F+QM +
Sbjct: 118 GVVDMYAKFGKM-GCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV--- 173
Query: 236 PNRVTMVNALA-ACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVR 294
V + NA+ SG + + D + V+ T +I Y ++ +
Sbjct: 174 -KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNIKDIDAARK 228
Query: 295 VFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME-QDGVRADEVTLLAVLSACNHSG 353
+F ++ E+N+ +WN +I G K +E IRLF M+ + D+VT+L+VL A + +G
Sbjct: 229 LFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTG 288
Query: 354 LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGS 413
+ +G F+ K VK ++D+ ++ G + +A + MP + A W +
Sbjct: 289 ALSLGEWCHCFVQRKKLD--KKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNA 345
Query: 414 LL 415
++
Sbjct: 346 MI 347
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 220/396 (55%), Gaps = 5/396 (1%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P +F++N+L + + + SL ++ M + P+ +T+PF+ K++S F+
Sbjct: 71 KPRIFLWNTLFKGYVRNQLPFESLL---LYKKMRDLGVRPDEFTYPFVVKAISQLGDFSC 127
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
++HAHV+K G V L+ +Y L S LF+ M +D+V+W +
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSS-AEFLFESMQVKDLVAWNAFLAVCV 186
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
G AL F +M V + T+V+ L+AC G++E+G I+D R+ + +++
Sbjct: 187 QTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNII 246
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+ A +DM+ KCG E +F +K++NV +W+ +I G A+ EA+ LF M+ +G
Sbjct: 247 VENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG 306
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK-YGFIPNVKHYACMVDLLARSGSLR 393
+R + VT L VLSAC+H+GLV+ G++ F +V+ P +HYACMVDLL RSG L
Sbjct: 307 LRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLE 366
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYA 453
EA+E ++ MP +P +WG+LL + D+ + VA LVE P +Y+V LSN+YA
Sbjct: 367 EAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYA 426
Query: 454 EMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
G+WD V+KVR M+ K SSVE E + H
Sbjct: 427 AAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIH 462
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 127 MHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPR 186
+ + T L L S S P Q + +HA VL+ G NSLL +
Sbjct: 2 LAKQTPLTKQMLSELLRASSSKP---KQLKKIHAIVLRTGFSE----KNSLLTQLLENLV 54
Query: 187 LFS-LC--RQLFDEMTHRDVVSWTVMIMGF-RNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
+ +C RQ+FDEM + W + G+ RN F ++LL +++M+ GV P+ T
Sbjct: 55 VIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPF-ESLLLYKKMRDLGVRPDEFTYP 113
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK 302
+ A + G G +H + + G+ ++ T L+ MY K G + +F S++ K
Sbjct: 114 FVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK 173
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
++ WNA + + A+ FN+M D V+ D T++++LSAC G +++G +I+
Sbjct: 174 DLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 220/389 (56%), Gaps = 7/389 (1%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+NS+I+A+ + L +S+F M + I P+ T L LS +SV
Sbjct: 316 WNSIIKAYELNEQ---PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQG 372
Query: 161 HVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKF 219
L+ G L DI + N+++ +YA L R +F+ + + DV+SW +I G+ G
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLG-LVDSARAVFNWLPNTDVISWNTIISGYAQNGFA 431
Query: 220 DDALLAFEQMQYAG-VAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTA 278
+A+ + M+ G +A N+ T V+ L AC+ +GA+ G +H + +NG LDV + T+
Sbjct: 432 SEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS 491
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRAD 338
L DMY KCGR+E+ + +F + N WN +I GE+A+ LF M +GV+ D
Sbjct: 492 LADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 551
Query: 339 EVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
+T + +LSAC+HSGLVD G+ F +++ YG P++KHY CMVD+ R+G L A +
Sbjct: 552 HITFVTLLSACSHSGLVDEGQWCFE-MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610
Query: 399 MRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRW 458
++ M P ++WG+LL + + G+++ + + L E+EP + Y+V LSN+YA G+W
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670
Query: 459 DDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
+ V+++R + + L K G SS+EV+ +
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNK 699
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 162/325 (49%), Gaps = 12/325 (3%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V+ +N +I + + + + S+F M + + P++ TFP + K+
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRT---VIDGNK 171
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
+H LK G + D+YV SL+ +Y+ + + R LFDEM RD+ SW MI G+ +G
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGN-ARILFDEMPVRDMGSWNAMISGYCQSG 230
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
+AL ++ A + VT+V+ L+AC ++G G IH + ++G E ++ +
Sbjct: 231 NAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
LID+YA+ GR+ + +VF + +++ +WN++IK L + AI LF M ++
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D +TL+++ S + G + R + GF + + F+ ++ +V + A+ G + A
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGW-FLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQG 422
V +P + W +++ G
Sbjct: 406 VFNWLP-NTDVISWNTIISGYAQNG 429
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 155/320 (48%), Gaps = 17/320 (5%)
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ A+ +HA ++ + ++ + L+ +Y + +L R FD + +RDV +W +MI
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNV-ALARHTFDHIQNRDVYAWNLMI 124
Query: 211 MGFRNAGKFDDALLAFEQ-MQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
G+ AG + + F M +G+ P+ T + L AC V G IH + G+
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGF 181
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
DV + +LI +Y++ V +F + +++ +WNA+I G + + +EA+ L N
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN- 240
Query: 330 MEQDGVRA-DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
G+RA D VT++++LSAC +G + G I + + K+G + ++DL A
Sbjct: 241 ----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI--KHGLESELFVSNKLIDLYAE 294
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSK--SQGDLEFSEFVARKLVELEPANSAYYV 446
G LR+ +V M + W S++ + + Q S F +L ++P + +
Sbjct: 295 FGRLRDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP-DCLTLI 352
Query: 447 HLSNLYAEMGRWDDVEKVRG 466
L+++ +++G V+G
Sbjct: 353 SLASILSQLGDIRACRSVQG 372
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 220/397 (55%), Gaps = 5/397 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+PR V +N++I ++ S + ++L + M + P+ +T + S
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDAL---RMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ + +H +V++ G D+Y+ +SL+ +YA S R+ ++F + RD +SW ++ G
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIED-SERVFSRLYCRDGISWNSLVAG 317
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G++++AL F QM A V P V + + ACA + +G +H ++ R G+ +
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ + +AL+DMY+KCG ++ ++F + + +W A+I G AL G EA+ LF M++
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
GV+ ++V +AVL+AC+H GLVD F + + YG ++HYA + DLL R+G L
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK-VYGLNQELEHYAAVADLLGRAGKL 496
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
EA+ + M +PT ++W +LL S +LE +E VA K+ ++ N YV + N+Y
Sbjct: 497 EEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMY 556
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
A GRW ++ K+R M+ + L K CS +E++ + H
Sbjct: 557 ASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTH 593
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 183/398 (45%), Gaps = 44/398 (11%)
Query: 38 TLLKD--FCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPR 95
TL+K+ S+ +Q+ AQ I QS + + ++ +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFI--RTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKS 67
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P V + S+IR F+ +L F M + P+H FP + KS +
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALAS---FVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAA-------------------------------- 183
+SVH +++LG D+Y N+L+ +YA
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 184 ---SPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
P R++F+ M +DVVS+ +I G+ +G ++DAL +M + P+ T
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
+ + L ++ V G IH ++ R G + DV +G++L+DMYAK R+E+ RVFS +
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
++ +WN+++ G EA+RLF +M V+ V +V+ AC H + +G+Q
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
+ G+++ G GF N+ + +VD+ ++ G+++ A ++
Sbjct: 365 LHGYVLRG--GFGSNIFIASALVDMYSKCGNIKAARKI 400
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/508 (27%), Positives = 245/508 (48%), Gaps = 72/508 (14%)
Query: 50 VQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFS 109
++ + +++IL +L+ N ++ + S +P +V I N +IR++
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYAS-LKDVASARKVFDEIPERNVIIINVMIRSYV 116
Query: 110 HSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLG--- 166
++ + + +F M + P+HYTFP + K+ S + +H K+G
Sbjct: 117 NNGFYGEGV---KVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 167 ----------------------------HLHDIYVHNSLLGVYAASPRL---FSLCRQL- 194
D+ NSL+ YA + R +CR++
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 195 --------------------------------FDEMTHRDVVSWTVMIMGFRNAGKFDDA 222
F +M + +VSW VMI + +A
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 223 LLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDM 282
+ + +M+ G P+ V++ + L AC D+ A+ +G IH +I R +++L ALIDM
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 353
Query: 283 YAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTL 342
YAKCG +E+ VF ++K ++V +W A+I + G +A+ LF++++ G+ D +
Sbjct: 354 YAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413
Query: 343 LAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
+ L+AC+H+GL++ GR F + + Y P ++H ACMVDLL R+G ++EA+ ++ M
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLMTD-HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM 472
Query: 403 PFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVE 462
+P + +WG+LL + + D + A KL +L P S YYV LSN+YA+ GRW++V
Sbjct: 473 SMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVT 532
Query: 463 KVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
+R +MK + L K+ G S+VEV HT
Sbjct: 533 NIRNIMKSKGLKKNPGASNVEVNRIIHT 560
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 197/322 (61%), Gaps = 2/322 (0%)
Query: 168 LHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFE 227
+ +++V +++ Y+ RL + +FD+ +D+V WT MI + + +AL FE
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDD-AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFE 333
Query: 228 QMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCG 287
+M +G+ P+ V+M + ++ACA+ G ++ W+H I NG E ++ + ALI+MYAKCG
Sbjct: 334 EMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 288 RVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLS 347
++ VF + +NV +W+++I L++ +A+ LF RM+Q+ V +EVT + VL
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 348 ACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPT 407
C+HSGLV+ G++IF + + +Y P ++HY CMVDL R+ LREA EV+ MP
Sbjct: 454 GCSHSGLVEEGKKIFASMTD-EYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASN 512
Query: 408 KAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGM 467
+WGSL+ + + G+LE +F A++++ELEP + V +SN+YA RW+DV +R +
Sbjct: 513 VVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRV 572
Query: 468 MKDRQLTKDLGCSSVEVEEQGH 489
M+++ + K+ G S ++ + H
Sbjct: 573 MEEKNVFKEKGLSRIDQNGKSH 594
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 207/474 (43%), Gaps = 45/474 (9%)
Query: 33 SDRAVTLLK--DFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXX 90
S A T+L+ FC S H++Q+ A IL + ++ + F S
Sbjct: 9 STAANTILEKLSFCKSLNHIKQLHAH-ILRTVINHKLNSFLFNLSVSSSSINLSYALNVF 67
Query: 91 XXVPRP-HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAP 149
+P P +FN +R S S ++ H+ + ++F + K++S
Sbjct: 68 SSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRL---DQFSFLPILKAVSKV 124
Query: 150 CHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVM 209
+ +H K+ L D +V + +YA+ R+ + R +FDEM+HRDVV+W M
Sbjct: 125 SALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRI-NYARNVFDEMSHRDVVTWNTM 183
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
I + G D+A FE+M+ + V P+ + + N ++AC +G + I++F+ N
Sbjct: 184 IERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDV 243
Query: 270 ELDVVLGTALIDMYA-------------------------------KCGRVEEGVRVFSS 298
+D L TAL+ MYA KCGR+++ +F
Sbjct: 244 RMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ 303
Query: 299 VKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
++K++ W +I + +EA+R+F M G++ D V++ +V+SAC + G++D
Sbjct: 304 TEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSS 418
+ + + G + ++++ A+ G L +V MP + W S++ +
Sbjct: 364 KWVHSCIHVN--GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVS-WSSMINAL 420
Query: 419 KSQGDLE--FSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKD 470
G+ S F K +EP N +V + + G ++ +K+ M D
Sbjct: 421 SMHGEASDALSLFARMKQENVEP-NEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 136/428 (31%), Positives = 227/428 (53%), Gaps = 38/428 (8%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
++ +N ++ F+ S +H ++ +F +H P+ T + S+ +
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVV---MFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCR------------------------ 192
+H +V+K G L D V ++++ +Y S ++ +
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 193 ---------QLFDEMTHR-DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
+LF E T +VVSWT +I G GK +AL F +MQ AGV PN VT+
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK 302
+ L AC + A+ G H F R +V +G+ALIDMYAKCGR+ VF+ + K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
N+ WN+++ G ++ +E + +F + + ++ D ++ ++LSAC GL D G + F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+ E +YG P ++HY+CMV+LL R+G L+EA+++++ MPF+P +WG+LL S + Q
Sbjct: 513 KMMSE-EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 423 DLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
+++ +E A KL LEP N YV LSN+YA G W +V+ +R M+ L K+ GCS +
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Query: 483 EVEEQGHT 490
+V+ + +T
Sbjct: 632 QVKNRVYT 639
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 172/395 (43%), Gaps = 81/395 (20%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P P ++ F+SLI A + + S+ +F+ M + ++P+ + P LFK + F
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFTQSI---GVFSRMFSHGLIPDSHVLPNLFKVCAELSAF 132
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVV-------- 204
+ +H G D +V S+ +Y R+ R++FD M+ +DVV
Sbjct: 133 KVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD-ARKVFDRMSDKDVVTCSALLCA 191
Query: 205 ---------------------------SWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
SW ++ GF +G +A++ F+++ + G P+
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGR--------- 288
+VT+ + L + DS + MG IH ++ + G D + +A+IDMY K G
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 289 ----------------------VEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEE 322
V++ + +F KE+ NV +W ++I G A E
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 323 AIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACM 382
A+ LF M+ GV+ + VT+ ++L AC + + GR GF V + + NV + +
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV--RVHLLDNVHVGSAL 429
Query: 383 VDLLARSGSLREAFEVMRCMPFDPTKAM--WGSLL 415
+D+ A+ G + + V M PTK + W SL+
Sbjct: 430 IDMYAKCGRINLSQIVFNMM---PTKNLVCWNSLM 461
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 44/288 (15%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+ HA +LK G +D Y+ L+ Y+ + F+ + + + S++ +I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYS-NYNCFNDADLVLQSIPDPTIYSFSSLIYAL 91
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
A F ++ F +M G+ P+ + N CA+ A ++G IH +G ++D
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 274 VLGTALIDMYAKCGR-------------------------------VEEGVRVFSSVK-- 300
+ ++ MY +CGR +EE VR+ S ++
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 301 --EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
E N+ +WN ++ G + +EA+ +F ++ G D+VT+ +VL + S +++MG
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSG------SLREAFEVMR 400
R I G+++ K G + + + M+D+ +SG SL FE+M
Sbjct: 272 RLIHGYVI--KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMME 317
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 224/425 (52%), Gaps = 40/425 (9%)
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
F++ ++IR ++ ++ +++ M + I P +TF L K+ +
Sbjct: 115 FLWTAVIRGYAIEGKFDEAI---AMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWT----------- 207
HA +L +YV N+++ +Y + R++FDEM RDV+SWT
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESI-DCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 208 --------------------VMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAA 247
M+ GF K +AL F++M+ +G+ + VT+ ++A
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA 290
Query: 248 CADSGAVEMGAWIHDFIRRNGWELD--VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVF 305
CA GA + +++G+ VV+G+ALIDMY+KCG VEE V VF S+ KNVF
Sbjct: 291 CAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVF 350
Query: 306 TWNAVIKGLALAKSGEEAIRLFNRM-EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGF 364
T++++I GLA +EA+ LF+ M Q ++ + VT + L AC+HSGLVD GRQ+F
Sbjct: 351 TYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDS 410
Query: 365 LVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDL 424
+ + +G P HY CMVDLL R+G L+EA E+++ M +P +WG+LL + + +
Sbjct: 411 MYQ-TFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNP 469
Query: 425 EFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
E +E A L ELEP Y+ LSN+YA G W V +VR ++K++ L K S V V
Sbjct: 470 EIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV-V 528
Query: 485 EEQGH 489
++ G
Sbjct: 529 DKNGQ 533
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 34/294 (11%)
Query: 142 LFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAA-SPRLFSLCRQLFDEMTH 200
L L + Q + +H HVL+ G Y+ L+ + R++ + +
Sbjct: 52 LISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQF 111
Query: 201 RDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWI 260
R+ WT +I G+ GKFD+A+ + M+ + P T L AC + +G
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 261 H-DFIRRNGWELDVVLGTALIDMYAKC-------------------------------GR 288
H R G+ V +G +IDMY KC G
Sbjct: 172 HAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 289 VEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
+E +F S+ K++ W A++ G A +EA+ F+RME+ G+RADEVT+ +SA
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA 290
Query: 349 CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
C G + + Y +V + ++D+ ++ G++ EA V M
Sbjct: 291 CAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 14/191 (7%)
Query: 240 TMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEE--GVRVFS 297
++++ L C + ++ IH + R G + + T LI K G + RV
Sbjct: 51 SLISKLDDCINLNQIKQ---IHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 298 SVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDM 357
V+ +N F W AVI+G A+ +EAI ++ M ++ + T A+L AC +++
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 358 GRQIFG--FLVEG-KYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSL 414
GRQ F + G + ++ N M+D+ + S+ A +V MP + W L
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNT-----MIDMYVKCESIDCARKVFDEMP-ERDVISWTEL 221
Query: 415 LVSSKSQGDLE 425
+ + G++E
Sbjct: 222 IAAYARVGNME 232
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 232/406 (57%), Gaps = 12/406 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHM--HRNTILPNHYTFPFLFKSLSAPC 150
+P+ ++ + S+IR + + N+L +S+F + N + S+ + C
Sbjct: 137 IPKRNIVSWTSMIRGYDL---NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISAC 193
Query: 151 HFAQA----QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL-FSLCRQLFDEMTHRDVVS 205
A +S+H+ V+K G + V N+LL YA ++ R++FD++ +D VS
Sbjct: 194 SRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS 253
Query: 206 WTVMIMGFRNAGKFDDALLAFEQMQYAGVAP-NRVTMVNALAACADSGAVEMGAWIHDFI 264
+ ++ + +G ++A F ++ V N +T+ L A + SGA+ +G IHD +
Sbjct: 254 YNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 265 RRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAI 324
R G E DV++GT++IDMY KCGRVE + F +K KNV +W A+I G + +A+
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD 384
LF M GVR + +T ++VL+AC+H+GL G + F + +G++G P ++HY CMVD
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAM-KGRFGVEPGLEHYGCMVD 432
Query: 385 LLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAY 444
LL R+G L++A+++++ M P +W SLL + + ++E +E +L EL+ +N Y
Sbjct: 433 LLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGY 492
Query: 445 YVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
Y+ LS++YA+ GRW DVE+VR +MK+R L K G S +E+ + H
Sbjct: 493 YMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHV 538
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 163/322 (50%), Gaps = 22/322 (6%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
V + VF +NS+I + S +S L F+ M + ++ P +FP K+ S+
Sbjct: 36 VDKTDVFSWNSVIADLARSG---DSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDI 92
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ H G+ DI+V ++L+ +Y+ +L R++FDE+ R++VSWT MI G
Sbjct: 93 FSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLED-ARKVFDEIPKRNIVSWTSMIRG 151
Query: 213 FRNAGKFDDA------LLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRR 266
+ G DA LL E + + + +V+ ++AC+ A + IH F+ +
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 267 NGWELDVVLGTALIDMYAKCGRVEEGV----RVFSSVKEKNVFTWNAVIKGLALAKSGEE 322
G++ V +G L+D YAK G E GV ++F + +K+ ++N+++ A + E
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGG--EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 323 AIRLFNRMEQDGVRA-DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC 381
A +F R+ ++ V + +TL VL A +HSG + +G+ I ++ + G +V
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI--RMGLEDDVIVGTS 327
Query: 382 MVDLLARSGSL---REAFEVMR 400
++D+ + G + R+AF+ M+
Sbjct: 328 IIDMYCKCGRVETARKAFDRMK 349
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 214/370 (57%), Gaps = 3/370 (0%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L M + P+ + P KS + +SVH +K G+ D++V +SL+ +
Sbjct: 101 LEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDM 160
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
YA + R++FDEM R+VV+W+ M+ G+ G+ ++AL F++ + +A N +
Sbjct: 161 YAKCGEIV-YARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
+ ++ CA+S +E+G IH ++ ++ +G++L+ +Y+KCG E +VF+ V
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
KN+ WNA++K A ++ I LF RM+ G++ + +T L VL+AC+H+GLVD GR
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKS 420
F + E + P KHYA +VD+L R+G L+EA EV+ MP DPT+++WG+LL S
Sbjct: 340 YFDQMKESR--IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTV 397
Query: 421 QGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCS 480
+ E + F A K+ EL P +S ++ LSN YA GR++D K R +++DR K+ G S
Sbjct: 398 HKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLS 457
Query: 481 SVEVEEQGHT 490
VE + HT
Sbjct: 458 WVEERNKVHT 467
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 205/336 (61%), Gaps = 3/336 (0%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+++H+ V++ G IYV NSLL +YA + S ++FD+M +D+V+W +I GF
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVAS-AYKVFDKMPEKDLVAWNSVINGFA 65
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
GK ++AL + +M G+ P+ T+V+ L+ACA GA+ +G +H ++ + G ++
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ-D 333
L+D+YA+CGRVEE +F + +KN +W ++I GLA+ G+EAI LF ME +
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
G+ E+T + +L AC+H G+V G + F + E +Y P ++H+ CMVDLLAR+G ++
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE-EYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYA 453
+A+E ++ MP P +W +LL + GD + +EF ++++LEP +S YV LSN+YA
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 304
Query: 454 EMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
RW DV+K+R M + K G S VEV + H
Sbjct: 305 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVH 340
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 3/169 (1%)
Query: 254 VEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKG 313
V +G IH + R+G+ + + +L+ +YA CG V +VF + EK++ WN+VI G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 314 LALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFI 373
A EEA+ L+ M G++ D T++++LSAC G + +G+++ +++ K G
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI--KVGLT 121
Query: 374 PNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
N+ ++DL AR G + EA + M D W SL+V G
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 169
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + +NS+I F+ + +L +++ M+ I P+ +T L + +
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEAL---ALYTEMNSKGIKPDGFTIVSLLSACAKIGAL 105
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ VH +++K+G +++ N LL +YA R+ + LFDEM ++ VSWT +I+G
Sbjct: 106 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV-EEAKTLFDEMVDKNSVSWTSLIVG 164
Query: 213 FRNAGKFDDALLAFEQMQYA-GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G +A+ F+ M+ G+ P +T V L AC+ G V+ G ++ RR E
Sbjct: 165 LAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG---FEYFRRMREEY 221
Query: 272 DVVLGT----ALIDMYAKCGRVEEGVRVFSSVK-EKNVFTWNAVI 311
+ ++D+ A+ G+V++ S+ + NV W ++
Sbjct: 222 KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 221/391 (56%), Gaps = 7/391 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNT-ILPNHYTFPFLFKSLSAPCH 151
+P ++F +N +I FS S S+ +F M R + + P+ +T P + ++ SA
Sbjct: 93 MPYRNIFSWNIIIGEFSRSGFASKSI---DLFLRMWRESCVRPDDFTLPLILRACSASRE 149
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
+H LKLG ++V ++L+ +Y +L R+LFD+M RD V +T M
Sbjct: 150 AKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLH-ARKLFDDMPVRDSVLYTAMFG 208
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G+ G+ L F +M Y+G A + V MV+ L AC GA++ G +H + R L
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+ LG A+ DMY KC ++ VF ++ ++V +W+++I G L + +LF+ M
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML 328
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
++G+ + VT L VLSAC H GLV+ F + E Y +P +KHYA + D ++R+G
Sbjct: 329 KEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE--YNIVPELKHYASVADCMSRAGL 386
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNL 451
L EA + + MP P +A+ G++L K G++E E VAR+L++L+P ++YYV L+ L
Sbjct: 387 LEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGL 446
Query: 452 YAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
Y+ GR+D+ E +R MK++Q++K GCSS+
Sbjct: 447 YSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
Query: 170 DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM 229
++ + + L+ Y+ LF +F M +R++ SW ++I F +G ++ F +M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 230 -QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGR 288
+ + V P+ T+ L AC+ S + G IH + G+ + + +AL+ MY G+
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 289 VEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
+ ++F + ++ + A+ G + +F M G D V ++++L A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 349 CNHSGLVDMGRQIFGFLVE 367
C G + G+ + G+ +
Sbjct: 245 CGQLGALKHGKSVHGWCIR 263
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 217/400 (54%), Gaps = 9/400 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V N+LI +S +N + +F M + P+ TF + ++ P
Sbjct: 590 LPEWSVVSMNALIAGYSQ----NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESL 645
Query: 153 AQAQSVHAHVLKLGHLHD-IYVHNSLLGVYAASPRLFSLCRQLFDEMTH-RDVVSWTVMI 210
H + K G + Y+ SLLG+Y S + C LF E++ + +V WT M+
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEAC-ALFSELSSPKSIVLWTGMM 704
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G G +++AL +++M++ GV P++ T V L C+ ++ G IH I +
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK-NVFTWNAVIKGLALAKSGEEAIRLFNR 329
LD + LIDMYAKCG ++ +VF ++ + NV +WN++I G A E+A+++F+
Sbjct: 765 LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDS 824
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
M Q + DE+T L VL+AC+H+G V GR+IF ++ G+YG V H ACMVDLL R
Sbjct: 825 MRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMI-GQYGIEARVDHVACMVDLLGRW 883
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLS 449
G L+EA + + P +W SLL + + GD E A KL+ELEP NS+ YV LS
Sbjct: 884 GYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLS 943
Query: 450 NLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
N+YA G W+ +R +M+DR + K G S ++VE++ H
Sbjct: 944 NIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTH 983
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 170/344 (49%), Gaps = 17/344 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSI--FAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P V +N +I S H ++I F +M ++++ T + ++ +
Sbjct: 290 PDVVAWNVMI-----SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLD 344
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
VHA +KLG +IYV +SL+ +Y+ ++ + + +F+ + ++ V W MI G+
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAK-VFEALEEKNDVFWNAMIRGY 403
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
+ G+ + F M+ +G + T + L+ CA S +EMG+ H I + ++
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL 463
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
+G AL+DMYAKCG +E+ ++F + +++ TWN +I ++ EA LF RM
Sbjct: 464 FVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
G+ +D L + L AC H + G+Q+ V K G ++ + ++D+ ++ G ++
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSV--KCGLDRDLHTGSSLIDMYSKCGIIK 581
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE-----FSEFVAR 432
+A +V +P +M + L++ SQ +LE F E + R
Sbjct: 582 DARKVFSSLPEWSVVSM--NALIAGYSQNNLEEAVVLFQEMLTR 623
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 151/324 (46%), Gaps = 12/324 (3%)
Query: 53 IQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSHSH 112
+ A+ I L SN + +++ + VF +N++IR ++H+
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF-WNAMIRGYAHNG 407
Query: 113 HHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIY 172
H + +F M + + +TF L + +A H+ ++K +++
Sbjct: 408 ESHK---VMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 173 VHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYA 232
V N+L+ +YA L RQ+F+ M RD V+W +I + +A F++M
Sbjct: 465 VGNALVDMYAKCGALED-ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 233 GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEG 292
G+ + + + L AC + G +H + G + D+ G++LIDMY+KCG +++
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 293 VRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHS 352
+VFSS+ E +V + NA+I G + + EEA+ LF M GV E+T ++ AC+
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKP 642
Query: 353 GLVDMGRQIF------GFLVEGKY 370
+ +G Q GF EG+Y
Sbjct: 643 ESLTLGTQFHGQITKRGFSSEGEY 666
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 10/287 (3%)
Query: 134 PNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQ 193
PN + LF +A V + GH D +++ Y +L R
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD-ARL 282
Query: 194 LFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGA 253
LF EM+ DVV+W VMI G G A+ F M+ + V R T+ + L+A
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 254 VEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKG 313
+++G +H + G ++ +G++L+ MY+KC ++E +VF +++EKN WNA+I+G
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 314 LALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG-- 371
A + + LF M+ G D+ T ++LS C S ++MG Q +++ K
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 372 -FIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVS 417
F+ N +VD+ A+ G+L +A ++ M D W +++ S
Sbjct: 463 LFVGNA-----LVDMYAKCGALEDARQIFERMC-DRDNVTWNTIIGS 503
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 150/322 (46%), Gaps = 12/322 (3%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
++VH+ L LG + + N+++ +YA ++ S + FD +DV +W M+ +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQV-SYAEKQFD-FLEKDVTAWNSMLSMYS 136
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
+ GK L +F + + PN+ T L+ CA VE G IH + + G E +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
G AL+DMYAKC R+ + RVF + + N W + G A EEA+ +F RM +G
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
R D + + V++ G + R +FG + P+V + M+ + G
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS------PDVVAWNVMISGHGKRGCETV 310
Query: 395 AFEV---MRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYY-VHLSN 450
A E MR T++ GS+L + +L+ V + ++L A++ Y L +
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 451 LYAEMGRWDDVEKVRGMMKDRQ 472
+Y++ + + KV ++++
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKN 392
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 126/303 (41%), Gaps = 39/303 (12%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L F + N I PN +TF + + + + + +H ++K+G + Y +L+ +
Sbjct: 145 LRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDM 204
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
YA R+ S R++F+ + + V WT + G+ AG ++A+L FE+M+ G P+ +
Sbjct: 205 YAKCDRI-SDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLA 263
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
V +I+ Y + G++++ +F +
Sbjct: 264 FVT-----------------------------------VINTYIRLGKLKDARLLFGEMS 288
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
+V WN +I G AI F M + V++ TL +VLSA +D+G
Sbjct: 289 SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKS 420
+ + K G N+ + +V + ++ + A +V + + W +++
Sbjct: 349 VHAEAI--KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKNDVFWNAMIRGYAH 405
Query: 421 QGD 423
G+
Sbjct: 406 NGE 408
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 14/243 (5%)
Query: 253 AVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIK 312
A+ +G +H G + + LG A++D+YAKC +V + F + EK+V WN+++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 313 GLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGF 372
+ + +R F + ++ + ++ T VLS C V+ GRQI ++ K G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI--KMGL 191
Query: 373 IPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVAR 432
N +VD+ A+ + +A V + DP W L G E + V
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 433 KLV-ELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTK---------DLGCSSV 482
++ E + +V + N Y +G+ D + G M + GC +V
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV 310
Query: 483 EVE 485
+E
Sbjct: 311 AIE 313
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 195/312 (62%), Gaps = 5/312 (1%)
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
Y ++ R+ R LF+ +DVV WT M+ G+ +FD+AL F MQ AG+ P+
Sbjct: 223 YVSTGRI-DEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
+V+ L CA +GA+E G WIH +I N +D V+GTAL+DMYAKCG +E + VF +K
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
E++ +W ++I GLA+ A+ L+ ME GVR D +T +AVL+ACNH G V GR+
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAM---WGSLLVS 417
IF + E ++ P +H +C++DLL R+G L EA E++ M + + + + SLL +
Sbjct: 402 IFHSMTE-RHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSA 460
Query: 418 SKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDL 477
+++ G+++ +E VA KL ++E ++S+ + L+++YA RW+DV VR MKD + K
Sbjct: 461 ARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFP 520
Query: 478 GCSSVEVEEQGH 489
GCSS+E++ GH
Sbjct: 521 GCSSIEIDGVGH 532
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 180/353 (50%), Gaps = 42/353 (11%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTP-LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
P + ++N ++++ + S T L++F + + P+++T P + KS+ +
Sbjct: 9 PSLLMYNKMLKSLADG----KSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+ VH + +K G D YV NSL+G+YA+ ++ + ++FDEM RDVVSW +I +
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKI-EITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 215 NAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
G+F+DA+ F++M Q + + + T+V+ L+AC+ +E+G I+ F+ +E+ V
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSV 182
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKN------------------------------ 303
+G AL+DM+ KCG +++ VF S+++KN
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 304 -VFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
V W A++ G +EA+ LF M+ G+R D L+++L+ C +G ++ G+ I
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLL 415
G++ E + V +VD+ A+ G + A EV + T A W SL+
Sbjct: 303 GYINENRVTVDKVVG--TALVDMYAKCGCIETALEVFYEIKERDT-ASWTSLI 352
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 24/296 (8%)
Query: 206 WTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIR 265
+ M+ + F L F +++ G+ P+ T+ L + V G +H +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 266 RNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIR 325
+ G E D + +L+ MYA G++E +VF + +++V +WN +I E+AI
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 326 LFNRMEQD-GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD 384
+F RM Q+ ++ DE T+++ LSAC+ +++G +I+ F+V F +V+ +VD
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT---EFEMSVRIGNALVD 190
Query: 385 LLARSGSL---REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPAN 441
+ + G L R F+ MR D W S++ S G ++ AR L E P
Sbjct: 191 MFCKCGCLDKARAVFDSMR----DKNVKCWTSMVFGYVSTGRID----EARVLFERSPVK 242
Query: 442 S-AYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKD--------LGCSSVEVEEQG 488
+ + N Y + R+D+ ++ M+ + D GC+ EQG
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG 298
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 214/370 (57%), Gaps = 2/370 (0%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
+ F M + + Y F + + + + +HA +++ IYV ++L+ +
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
Y + + +FD M ++VVSWT M++G+ G+ ++A+ F MQ +G+ P+ T
Sbjct: 315 YCKC-KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
+ A++ACA+ ++E G+ H +G V + +L+ +Y KCG +++ R+F+ +
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
++ +W A++ A E I+LF++M Q G++ D VTL V+SAC+ +GLV+ G++
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKS 420
F L+ +YG +P++ HY+CM+DL +RSG L EA + MPF P W +LL + ++
Sbjct: 494 YFK-LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 421 QGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCS 480
+G+LE ++ A L+EL+P + A Y LS++YA G+WD V ++R M+++ + K+ G S
Sbjct: 553 KGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQS 612
Query: 481 SVEVEEQGHT 490
++ + + H+
Sbjct: 613 WIKWKGKLHS 622
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 156/369 (42%), Gaps = 62/369 (16%)
Query: 93 VPRPHVFIFNSLIRAFSHSHH-----------------------HHNSLTPLSIFAHMHR 129
+P+P++F +N+L+ A+S + SL+ L A
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 130 NTILPN------HYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYA- 182
NT++ + T + K S+ H + + +H V+KLG + V + LL +YA
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 183 ------ASPRLFSL-----------------------CRQLFDEMTHRDVVSWTVMIMGF 213
A + L QLF M +D VSW MI G
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGL 245
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
G +A+ F +M+ G+ ++ + L AC GA+ G IH I R ++ +
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
+G+ALIDMY KC + VF +K+KNV +W A++ G EEA+++F M++
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
G+ D TL +SAC + ++ G Q G + G I V +V L + G +
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS--GLIHYVTVSNSLVTLYGKCGDID 423
Query: 394 EAFEVMRCM 402
++ + M
Sbjct: 424 DSTRLFNEM 432
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 145/330 (43%), Gaps = 35/330 (10%)
Query: 127 MHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPR 186
+H N I Y FL+ ++ ++ + V +++ N+LL Y+ +
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAG- 86
Query: 187 LFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP-NRVTMVNAL 245
L S F+++ RD V+W V+I G+ +G A+ A+ M A RVT++ L
Sbjct: 87 LISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTML 146
Query: 246 AACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVF 305
+ +G V +G IH + + G+E +++G+ L+ MYA G + + +VF + ++N
Sbjct: 147 KLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTV 206
Query: 306 TWNAVIKGLALAKSGEEAIRLFNRMEQD------------------------------GV 335
+N+++ GL E+A++LF ME+D G+
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGL 266
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+ D+ +VL AC G ++ G+QI ++ + F ++ + ++D+ + L A
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACII--RTNFQDHIYVGSALIDMYCKCKCLHYA 324
Query: 396 FEVMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
V M W +++V G E
Sbjct: 325 KTVFDRMK-QKNVVSWTAMVVGYGQTGRAE 353
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 208/367 (56%), Gaps = 3/367 (0%)
Query: 120 PLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLG 179
+ +F M I P+ YT + + + + VH + + DI+V N+L+
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 180 VYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM-QYAGVAPNR 238
+YA + +F EM +D++SW +I G+ ++AL F + + +P+
Sbjct: 441 MYAKCGSM-QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 239 VTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSS 298
T+ L ACA A + G IH +I RNG+ D + +L+DMYAKCG + +F
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD 559
Query: 299 VKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
+ K++ +W +I G + G+EAI LFN+M Q G+ ADE++ +++L AC+HSGLVD G
Sbjct: 560 IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSS 418
+ F ++ + P V+HYAC+VD+LAR+G L +A+ + MP P +WG+LL
Sbjct: 620 WRFFN-IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 678
Query: 419 KSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLG 478
+ D++ +E VA K+ ELEP N+ YYV ++N+YAE +W+ V+++R + R L K+ G
Sbjct: 679 RIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPG 738
Query: 479 CSSVEVE 485
CS +E++
Sbjct: 739 CSWIEIK 745
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 160/311 (51%), Gaps = 9/311 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
V +N L+ + S S+ +F M + + + YTF + KS S+
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSI---GLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H +LK G V NSL+ Y + R+ S R++FDEMT RDV+SW +I G
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDS-ARKVFDEMTERDVISWNSIING 270
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ + G + L F QM +G+ + T+V+ A CADS + +G +H + + +
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
L+DMY+KCG ++ VF + +++V ++ ++I G A EA++LF ME+
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
+G+ D T+ AVL+ C L+D G+++ ++ E GF V + ++D+ A+ GS+
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSM 448
Query: 393 REA---FEVMR 400
+EA F MR
Sbjct: 449 QEAELVFSEMR 459
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 153/296 (51%), Gaps = 7/296 (2%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V +NS+I + + L S+F M + I + T +F + + ++
Sbjct: 261 VISWNSIINGYVSNGLAEKGL---SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VH+ +K + N+LL +Y+ L S + +F EM+ R VVS+T MI G+ G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDS-AKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
+A+ FE+M+ G++P+ T+ L CA ++ G +H++I+ N D+ +
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN-RMEQDGVR 336
AL+DMYAKCG ++E VFS ++ K++ +WN +I G + EA+ LFN +E+
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
DE T+ VL AC D GR+I G+++ + G+ + +VD+ A+ G+L
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIM--RNGYFSDRHVANSLVDMYAKCGAL 550
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 111/230 (48%), Gaps = 3/230 (1%)
Query: 193 QLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSG 252
++FDE+ + W +++ +G F ++ F++M +GV + T + +
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 253 AVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIK 312
+V G +H FI ++G+ +G +L+ Y K RV+ +VF + E++V +WN++I
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 313 GLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGF 372
G E+ + +F +M G+ D T+++V + C S L+ +GR + V K F
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV--KACF 327
Query: 373 IPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+ ++D+ ++ G L A V R M D + + S++ +G
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAGYAREG 376
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 183 ASPRLFSLCRQLFDEMT--HRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
AS R S C D +T R V + F +G ++A+ + P T
Sbjct: 42 ASLRTVSDC---VDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--T 96
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
+ + L CADS +++ G + +FIR NG+ +D LG+ L MY CG ++E RVF VK
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK 156
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
+ WN ++ LA + +I LF +M GV D T V + + V G Q
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 361 IFGFLVEGKYG 371
+ GF+++ +G
Sbjct: 217 LHGFILKSGFG 227
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 234/461 (50%), Gaps = 14/461 (3%)
Query: 35 RAVTLLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXX-- 92
R + + C+S +++I + +I++ LQ +P+I +H + C
Sbjct: 6 RVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHF 65
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHR----NTILPNHYTFPFLFKSLSA 148
P +N LIR FS NS +PL+ +R + P+ +TF F KS
Sbjct: 66 DSDPSTSDWNYLIRGFS------NSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCER 119
Query: 149 PCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTV 208
+ +H V++ G L D V SL+ Y+A+ + + ++FDEM RD+VSW V
Sbjct: 120 IKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSV-EIASKVFDEMPVRDLVSWNV 178
Query: 209 MIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG 268
MI F + G + AL +++M GV + T+V L++CA A+ MG +H
Sbjct: 179 MICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR 238
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN 328
E V + ALIDMYAKCG +E + VF+ +++++V TWN++I G + G EAI F
Sbjct: 239 CESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFR 298
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
+M GVR + +T L +L C+H GLV G + F ++ ++ PNVKHY CMVDL R
Sbjct: 299 KMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFE-IMSSQFHLTPNVKHYGCMVDLYGR 357
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHL 448
+G L + E++ +W +LL S K +LE E +KLV+LE N+ YV +
Sbjct: 358 AGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLM 417
Query: 449 SNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+++Y+ +R +++ L G S +E+ +Q H
Sbjct: 418 TSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVH 458
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 212/378 (56%), Gaps = 6/378 (1%)
Query: 114 HHNSLTP-LSIFAH--MHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHD 170
H S P LS+ AH M + +LP+ +T L + S + VH +++ D
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 171 IYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQ 230
++V+ S+L +Y L ++ + LFD M + +VSW +I G+ G D AL F QM
Sbjct: 531 LFVYLSVLSLYIHCGELCTV-QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 231 YAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVE 290
G+ ++M+ AC+ ++ +G H + ++ E D + +LIDMYAK G +
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 291 EGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACN 350
+ +VF+ +KEK+ +WNA+I G + +EAI+LF M++ G D++T L VL+ACN
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 351 HSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVM-RCMPFDPTKA 409
HSGL+ G + + + +G PN+KHYAC++D+L R+G L +A V+ M +
Sbjct: 710 HSGLIHEGLRYLDQM-KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 768
Query: 410 MWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMK 469
+W SLL S + +LE E VA KL ELEP YV LSNLYA +G+W+DV KVR M
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN 828
Query: 470 DRQLTKDLGCSSVEVEEQ 487
+ L KD GCS +E+ +
Sbjct: 829 EMSLRKDAGCSWIELNRK 846
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 158/338 (46%), Gaps = 14/338 (4%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNT-ILPNHYTFPFLFKSLSAPCHFAQA 155
++F +N++I ++S + + L F M T +LP+H+T+P + K+ +
Sbjct: 150 NLFQWNAVISSYSRNELYDE---VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
+VH V+K G + D++V N+L+ Y + QLFD M R++VSW MI F +
Sbjct: 207 LAVHGLVVKTGLVEDVFVGNALVSFYGTHG-FVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 216 AGKFDDA-LLAFEQMQYAG---VAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G +++ LL E M+ G P+ T+V L CA + +G +H + + +
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
++VL AL+DMY+KCG + +F KNV +WN ++ G + + +M
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 332 QDG--VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
G V+ADEVT+L + C H + +++ + + K F+ N V A+
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL--KQEFVYNELVANAFVASYAKC 443
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS 427
GSL A V + T W +L+ D S
Sbjct: 444 GSLSYAQRVFHGIR-SKTVNSWNALIGGHAQSNDPRLS 480
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 129/277 (46%), Gaps = 4/277 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLS-IFAHMHRNTILPNHYTFPFLFKSLSAPCH 151
+P ++ +NS+IR FS + S L + +P+ T + +
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
+ VH +KL ++ ++N+L+ +Y+ + + + +F +++VVSW M+
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN-AQMIFKMNNNKNVVSWNTMVG 366
Query: 212 GFRNAGKFDDALLAFEQMQYAG--VAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
GF G QM G V + VT++NA+ C + +H + + +
Sbjct: 367 GFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 426
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
+ ++ A + YAKCG + RVF ++ K V +WNA+I G A + ++ +
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
M+ G+ D T+ ++LSAC+ + +G+++ GF++
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFII 523
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 140/268 (52%), Gaps = 6/268 (2%)
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
+ +H + LK +++ V N+ + YA L S +++F + + V SW +I G
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSL-SYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
+ +L A QM+ +G+ P+ T+ + L+AC+ ++ +G +H FI RN E D+ +
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
+++ +Y CG + +F ++++K++ +WN VI G + A+ +F +M G+
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC-MVDLLARSGSLRE 394
+ ++++ V AC+ + +GR+ + ++ + + AC ++D+ A++GS+ +
Sbjct: 594 QLCGISMMPVFGACSLLPSLRLGREAHAYALK---HLLEDDAFIACSLIDMYAKNGSITQ 650
Query: 395 AFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+ +V + + + A W ++++ G
Sbjct: 651 SSKVFNGLK-EKSTASWNAMIMGYGIHG 677
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 117/249 (46%), Gaps = 8/249 (3%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAF-EQMQYAGVAPNRVTMVNALAACAD 250
R +FD + +++ W +I + +D+ L F E + + P+ T + ACA
Sbjct: 140 RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 199
Query: 251 SGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAV 310
V +G +H + + G DV +G AL+ Y G V + +++F + E+N+ +WN++
Sbjct: 200 MSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSM 259
Query: 311 IKGLALAKSGEEAIRLFNR-MEQDGVRA---DEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
I+ + EE+ L ME++G A D TL+ VL C + +G+ + G+ V
Sbjct: 260 IRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV 319
Query: 367 EGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEF 426
K + ++D+ ++ G + A + + M + W +++ ++GD
Sbjct: 320 --KLRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHG 376
Query: 427 SEFVARKLV 435
+ V R+++
Sbjct: 377 TFDVLRQML 385
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 245 LAACADSGAVEMGAWIHDFIR-----RNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV 299
L A +EMG IH + RN D VL T +I MYA CG ++ VF ++
Sbjct: 91 LQASGKRKDIEMGRKIHQLVSGSTRLRN----DDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 300 KEKNVFTWNAVIKGLALAKSGEEAIRLFNRM-EQDGVRADEVTLLAVLSACNHSGLVDMG 358
+ KN+F WNAVI + + +E + F M + D T V+ AC V +G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSS 418
+ G +V K G + +V +V G + +A ++ MP + W S++
Sbjct: 207 LAVHGLVV--KTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMIRVF 263
Query: 419 KSQGDLEFSEFVARKLVELEPANSAYYVHLSNL 451
G E S + +++E E + A+ ++ L
Sbjct: 264 SDNGFSEESFLLLGEMME-ENGDGAFMPDVATL 295
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 208/367 (56%), Gaps = 2/367 (0%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L ++ M + I P +++ K+ + +HA ++K D V+N LL +
Sbjct: 221 LIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKL 280
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
Y S LF R++FD M+ R+VV+W +I + + F +MQ + + T
Sbjct: 281 YMESG-LFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWAT 339
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
+ L AC+ A+ G IH I ++ + DV L +L+DMY KCG VE RVF +
Sbjct: 340 LTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 399
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
K++ +WN ++ A+ + EE I LF M + GV D +T +A+LS C+ +GL + G
Sbjct: 400 TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS 459
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKS 420
+F + + ++ P ++HYAC+VD+L R+G ++EA +V+ MPF P+ ++WGSLL S +
Sbjct: 460 LFERM-KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRL 518
Query: 421 QGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCS 480
G++ E A++L LEP N YV +SN+YA+ WD+V+K+R MMK R + K+ GCS
Sbjct: 519 HGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCS 578
Query: 481 SVEVEEQ 487
V+V+++
Sbjct: 579 WVQVKDK 585
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 139/285 (48%), Gaps = 22/285 (7%)
Query: 155 AQSVHAHVLKLGHL--------HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVS- 205
A+S+H H +K+ L H+ + + L+ +++ RL L R++FD++T +++
Sbjct: 144 AKSLH-HGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRL-DLARKIFDDVTDSSLLTE 201
Query: 206 --WTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDF 263
W M +G+ G DAL+ + M + + P ++ AL AC D + +G IH
Sbjct: 202 KVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQ 261
Query: 264 IRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEA 323
I + ++D V+ L+ +Y + G ++ +VF + E+NV TWN++I L+ E
Sbjct: 262 IVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEM 321
Query: 324 IRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMV 383
LF +M+++ + TL +L AC+ + G++I +++ K P+V ++
Sbjct: 322 FNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEK--PDVPLLNSLM 379
Query: 384 DLLARSGSL---REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
D+ + G + R F+VM A W +L G++E
Sbjct: 380 DMYGKCGEVEYSRRVFDVMLTKDL----ASWNIMLNCYAINGNIE 420
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 216/401 (53%), Gaps = 34/401 (8%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L +F M + + P+ + S S + +S H +VL+ G + N+L+ +
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM----------- 229
Y R + R +FD M+++ VV+W ++ G+ G+ D A FE M
Sbjct: 382 YMKCHRQDTAFR-IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 230 ---------------------QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG 268
GV + VTM++ +AC GA+++ WI+ +I +NG
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN 328
+LDV LGT L+DM+++CG E + +F+S+ ++V W A I +A+A + E AI LF+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
M + G++ D V + L+AC+H GLV G++IF +++ +G P HY CMVDLL R
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK-LHGVSPEDVHYGCMVDLLGR 619
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHL 448
+G L EA +++ MP +P +W SLL + + QG++E + + A K+ L P + YV L
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 449 SNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
SN+YA GRW+D+ KVR MK++ L K G SS+++ + H
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTH 720
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 171/328 (52%), Gaps = 8/328 (2%)
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
F++NSLIR ++ S + ++ +F M + I P+ YTFPF + + +
Sbjct: 100 FMYNSLIRGYASSGLCNEAIL---LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
H ++K+G+ D++V NSL+ YA L S R++FDEM+ R+VVSWT MI G+
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDS-ARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 219 FDDAL-LAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
DA+ L F ++ V PN VTMV ++ACA +E G ++ FIR +G E++ ++ +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
AL+DMY KC ++ R+F N+ NA+ EA+ +FN M GVR
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D +++L+ +S+C+ + G+ G+++ + N+ + ++D+ + AF
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN--ALIDMYMKCHRQDTAFR 393
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
+ M + T W S++ G+++
Sbjct: 394 IFDRMS-NKTVVTWNSIVAGYVENGEVD 420
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 149/312 (47%), Gaps = 38/312 (12%)
Query: 121 LSIFAHMHRNT-ILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLG-HLHDIYVHNSLL 178
+ +F M R+ + PN T + + + + V+A + G ++D+ V ++L+
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALV 278
Query: 179 GVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR 238
+Y + + ++LFDE ++ M + G +AL F M +GV P+R
Sbjct: 279 DMYMKCNAI-DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 239 VTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS- 297
++M++A+++C+ + G H ++ RNG+E + ALIDMY KC R + R+F
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 298 ------------------------------SVKEKNVFTWNAVIKGLALAKSGEEAIRLF 327
++ EKN+ +WN +I GL EEAI +F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 328 NRME-QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
M+ Q+GV AD VT++++ SAC H G +D+ + I+ ++ K G +V+ +VD+
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI--EKNGIQLDVRLGTTLVDMF 515
Query: 387 ARSGSLREAFEV 398
+R G A +
Sbjct: 516 SRCGDPESAMSI 527
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 216/401 (53%), Gaps = 34/401 (8%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L +F M + + P+ + S S + +S H +VL+ G + N+L+ +
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM----------- 229
Y R + R +FD M+++ VV+W ++ G+ G+ D A FE M
Sbjct: 382 YMKCHRQDTAFR-IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 230 ---------------------QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG 268
GV + VTM++ +AC GA+++ WI+ +I +NG
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN 328
+LDV LGT L+DM+++CG E + +F+S+ ++V W A I +A+A + E AI LF+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
M + G++ D V + L+AC+H GLV G++IF +++ +G P HY CMVDLL R
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK-LHGVSPEDVHYGCMVDLLGR 619
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHL 448
+G L EA +++ MP +P +W SLL + + QG++E + + A K+ L P + YV L
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 449 SNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
SN+YA GRW+D+ KVR MK++ L K G SS+++ + H
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTH 720
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 171/328 (52%), Gaps = 8/328 (2%)
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
F++NSLIR ++ S + ++ +F M + I P+ YTFPF + + +
Sbjct: 100 FMYNSLIRGYASSGLCNEAIL---LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
H ++K+G+ D++V NSL+ YA L S R++FDEM+ R+VVSWT MI G+
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDS-ARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 219 FDDAL-LAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
DA+ L F ++ V PN VTMV ++ACA +E G ++ FIR +G E++ ++ +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
AL+DMY KC ++ R+F N+ NA+ EA+ +FN M GVR
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D +++L+ +S+C+ + G+ G+++ + N+ + ++D+ + AF
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN--ALIDMYMKCHRQDTAFR 393
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
+ M + T W S++ G+++
Sbjct: 394 IFDRMS-NKTVVTWNSIVAGYVENGEVD 420
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 149/312 (47%), Gaps = 38/312 (12%)
Query: 121 LSIFAHMHRNT-ILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLG-HLHDIYVHNSLL 178
+ +F M R+ + PN T + + + + V+A + G ++D+ V ++L+
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALV 278
Query: 179 GVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR 238
+Y + + ++LFDE ++ M + G +AL F M +GV P+R
Sbjct: 279 DMYMKCNAI-DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 239 VTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS- 297
++M++A+++C+ + G H ++ RNG+E + ALIDMY KC R + R+F
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 298 ------------------------------SVKEKNVFTWNAVIKGLALAKSGEEAIRLF 327
++ EKN+ +WN +I GL EEAI +F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 328 NRME-QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
M+ Q+GV AD VT++++ SAC H G +D+ + I+ ++ K G +V+ +VD+
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI--EKNGIQLDVRLGTTLVDMF 515
Query: 387 ARSGSLREAFEV 398
+R G A +
Sbjct: 516 SRCGDPESAMSI 527
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 189/304 (62%), Gaps = 3/304 (0%)
Query: 188 FSLCRQLFDEMT--HRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNAL 245
+ R +FD+M ++VV+WT++I G+ G +A +QM +G+ + +++ L
Sbjct: 263 MEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISIL 322
Query: 246 AACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVF 305
AAC +SG + +G IH ++R+ + + AL+DMYAKCG +++ VF+ + +K++
Sbjct: 323 AACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV 382
Query: 306 TWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFL 365
+WN ++ GL + G+EAI LF+RM ++G+R D+VT +AVL +CNH+GL+D G F +
Sbjct: 383 SWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYF-YS 441
Query: 366 VEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
+E Y +P V+HY C+VDLL R G L+EA +V++ MP +P +WG+LL + + +++
Sbjct: 442 MEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVD 501
Query: 426 FSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVE 485
++ V LV+L+P + Y LSN+YA W+ V +R MK + K G SSVE+E
Sbjct: 502 IAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELE 561
Query: 486 EQGH 489
+ H
Sbjct: 562 DGIH 565
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 226/427 (52%), Gaps = 44/427 (10%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+ +L+ +FS NS+ +F M R + + + LF + AQ H
Sbjct: 79 WTTLLSSFSRYGLLVNSM---KLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHG 135
Query: 161 HVLKLGHLHDIYVHNSLLGVYAAS------PRLFSLC----------------------- 191
+K+G L + V N+L+ +Y R+F
Sbjct: 136 VAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLER 195
Query: 192 -RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQY-AGVAPNRVTMVNALAACA 249
R++F EM R+ V+WTVM+ G+ AG + L +M + G N VT+ + L+ACA
Sbjct: 196 GREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACA 255
Query: 250 DSGAVEMGAWIHDFIRRN----GWEL---DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK 302
SG + +G W+H + + G E DV++GTAL+DMYAKCG ++ + VF ++++
Sbjct: 256 QSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR 315
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
NV TWNA+ GLA+ G I +F +M ++ V+ D++T AVLSAC+HSG+VD G + F
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCF 374
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
L YG P V HYACMVDLL R+G + EA +MR MP P + + GSLL S G
Sbjct: 375 HSL--RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHG 432
Query: 423 DLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
+E +E + R+L+++ P N+ Y + +SN+Y GR D + +RG ++ R + K G SS+
Sbjct: 433 KVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSI 492
Query: 483 EVEEQGH 489
V + H
Sbjct: 493 YVNDSVH 499
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 46/273 (16%)
Query: 172 YVHNSLLGVYAASPRLFSLCRQLFDE--MTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM 229
Y+ N+L YA+S + + ++LFDE ++ +D V WT ++ F G +++ F +M
Sbjct: 44 YLSNALFQFYASSGEMVT-AQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM 102
Query: 230 QYAGVAPNRVTMVNALAACA---DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKC 286
+ V + V++V CA D G + G H + G V + AL+DMY KC
Sbjct: 103 RRKRVEIDDVSVVCLFGVCAKLEDLGFAQQG---HGVAVKMGVLTSVKVCNALMDMYGKC 159
Query: 287 GRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA--------- 337
G V E R+F ++EK+V +W V+ + + E +F+ M + A
Sbjct: 160 GLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYL 219
Query: 338 -----------------------DEVTLLAVLSACNHSGLVDMGRQIFGFLVE-----GK 369
+ VTL ++LSAC SG + +GR + + ++ G+
Sbjct: 220 GAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGE 279
Query: 370 YGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
+V +VD+ A+ G++ + V R M
Sbjct: 280 EASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM 312
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 227/418 (54%), Gaps = 42/418 (10%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
F++N LI+A+ H H S+ ++ + + + P+H+TF F+F + ++ +
Sbjct: 47 TFLYNKLIQAYYVHHQPHESIVLYNLLSF---DGLRPSHHTFNFIFAASASFSSARPLRL 103
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLC--RQLFDEMTHRDV------------ 203
+H+ + G D + +L+ YA +L +LC R++FDEM+ RDV
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYA---KLGALCCARRVFDEMSKRDVPVWNAMITGYQR 160
Query: 204 -------------------VSWTVMIMGFRNAGKFDDALLAFEQMQY-AGVAPNRVTMVN 243
SWT +I GF G + +AL F M+ V PN +T+V+
Sbjct: 161 RGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVS 220
Query: 244 ALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV-KEK 302
L ACA+ G +E+G + + R NG+ ++ + A I+MY+KCG ++ R+F + ++
Sbjct: 221 VLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQR 280
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
N+ +WN++I LA +EA+ LF +M ++G + D VT + +L AC H G+V G+++F
Sbjct: 281 NLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELF 340
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+ E + P ++HY CM+DLL R G L+EA+++++ MP P +WG+LL + G
Sbjct: 341 KSM-EEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Query: 423 DLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCS 480
++E +E + L +LEP N V +SN+YA +WD V ++R +MK +TK G S
Sbjct: 400 NVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 139/326 (42%), Gaps = 40/326 (12%)
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
+ +HAH L+ G + LL P L R+LFD + + +I +
Sbjct: 5 KQLHAHCLRTG----VDETKDLLQRLLLIPNLV-YARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
+ ++++ + + + G+ P+ T AA A + +H R+G+E D
Sbjct: 60 HHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 276 GTALIDMYAK-----CGR--------------------------VEEGVRVFSSVKEKNV 304
T LI YAK C R ++ + +F S+ KNV
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 305 FTWNAVIKGLALAKSGEEAIRLFNRMEQD-GVRADEVTLLAVLSACNHSGLVDMGRQIFG 363
+W VI G + + EA+++F ME+D V+ + +T+++VL AC + G +++GR++ G
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 364 FLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGD 423
+ E GF N+ +++ ++ G + A + + W S++ S + G
Sbjct: 240 YAREN--GFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 297
Query: 424 -LEFSEFVARKLVELEPANSAYYVHL 448
E A+ L E E ++ +V L
Sbjct: 298 HDEALTLFAQMLREGEKPDAVTFVGL 323
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 191/328 (58%), Gaps = 4/328 (1%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+S+H +V+K I V NSL+ +Y L R + T +V++W MI +
Sbjct: 452 GKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT--NVITWNAMIASYV 509
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
+ + + A+ F++M P+ +T+V L AC ++G++E G IH +I E+++
Sbjct: 510 HCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLS 569
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
L ALIDMYAKCG +E+ +F + +K+ WN +I G + E AI LF++ME+
Sbjct: 570 LSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESD 629
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
V+ T LA+LSAC H+GLV+ G+++ FL +Y PN+KHY+C+VDLL+RSG+L E
Sbjct: 630 VKPTGPTFLALLSACTHAGLVEQGKKL--FLKMHQYDVKPNLKHYSCLVDLLSRSGNLEE 687
Query: 395 AFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAE 454
A + MPF P +WG+LL S + G+ E +A + V +P N YY+ L+N+Y+
Sbjct: 688 AESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSA 747
Query: 455 MGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
G+W++ E+ R MM++ + K G S V
Sbjct: 748 AGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 159/345 (46%), Gaps = 16/345 (4%)
Query: 30 SGFSDRAVTLLKDFCHSRLHVQQIQ---AQLILHNLQSNPTIAHHFITVCQSHXXXXXXX 86
+ + DR ++++ C L ++ ++ A +I L N +A I+ S+
Sbjct: 22 ASYVDRHISVI--LCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSS 79
Query: 87 XXXXXXVPRPHVFIFNSLIRA-FSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKS 145
V R +F++NS+I+A FS+ + + L F M + P+H+T P + +
Sbjct: 80 RVFHL-VTRRDIFLWNSIIKAHFSNGDYARS----LCFFFSMLLSGQSPDHFTAPMVVSA 134
Query: 146 LSAPCHFAQAQSVHAHVLKLGHL-HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVV 204
+ F VH VLK G + V S + Y+ L C +FDEM RDVV
Sbjct: 135 CAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACL-VFDEMPDRDVV 193
Query: 205 SWTVMIMGFRNAGKFDDALLAFEQMQYAGV---APNRVTMVNALAACADSGAVEMGAWIH 261
+WT +I G G+ + L +M AG PN T+ AC++ GA++ G +H
Sbjct: 194 AWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLH 253
Query: 262 DFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGE 321
F +NG + +++ Y+K G E F + ++++F+W ++I LA + E
Sbjct: 254 GFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDME 313
Query: 322 EAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
E+ +F M+ G+ D V + +++ LV G+ GF++
Sbjct: 314 ESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVI 358
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 164/390 (42%), Gaps = 42/390 (10%)
Query: 134 PNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQ 193
PN T F++ S + + +H +K G +V +S+ Y+ S S
Sbjct: 228 PNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNP-SEAYL 286
Query: 194 LFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGA 253
F E+ D+ SWT +I +G +++ F +MQ G+ P+ V + +
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMML 346
Query: 254 VEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK-NVFTWNAVIK 312
V G H F+ R+ + LD + +L+ MY K + ++F + E+ N WN ++K
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 313 GLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGF 372
G K + I LF +++ G+ D + +V+S+C+H G V +G+ + ++V+
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 373 IPNVKHYACMVDLLARSGSLREA---------------------------------FEVM 399
+V + ++DL + G L A F+ M
Sbjct: 467 TISVVN--SLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRM 524
Query: 400 RCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELE-PANSAYYVHLSNLYAEMGRW 458
F P+ +LL++ + G LE + + R + E E N + L ++YA+ G
Sbjct: 525 VSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGH- 583
Query: 459 DDVEKVRGMMKDRQLTKDLGCSSVEVEEQG 488
+EK R + D KD C +V + G
Sbjct: 584 --LEKSRELF-DAGNQKDAVCWNVMISGYG 610
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 198/375 (52%), Gaps = 14/375 (3%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKL-------GHLHDIYV 173
L + M + I PN T + ++ + +H + +K GH + V
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 174 HNSLLGVYAASPRLFSLCRQLFDEMT--HRDVVSWTVMIMGFRNAGKFDDALLAFEQM-- 229
N L+ +YA ++ R +FD ++ RDVV+WTVMI G+ G + AL +M
Sbjct: 410 INQLIDMYAKCKKV-DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 230 QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE-LDVVLGTALIDMYAKCGR 288
+ PN T+ AL ACA A+ +G IH + RN + + + LIDMYAKCG
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGS 528
Query: 289 VEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
+ + VF ++ KN TW +++ G + GEEA+ +F+ M + G + D VTLL VL A
Sbjct: 529 ISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 349 CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTK 408
C+HSG++D G + F + + +G P +HYAC+VDLL R+G L A ++ MP +P
Sbjct: 589 CSHSGMIDQGMEYFNRM-KTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 409 AMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMM 468
+W + L + G +E E+ A K+ EL + Y LSNLYA GRW DV ++R +M
Sbjct: 648 VVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLM 707
Query: 469 KDRQLTKDLGCSSVE 483
+ + + K GCS VE
Sbjct: 708 RHKGVKKRPGCSWVE 722
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 145/258 (56%), Gaps = 5/258 (1%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V+ +NSLIR++ + + L +F MH + P++YTFPF+FK+ +S
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLY---LFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGES 148
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
HA L G + +++V N+L+ +Y+ R S R++FDEM+ DVVSW +I + G
Sbjct: 149 AHALSLVTGFISNVFVGNALVAMYSRC-RSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 218 KFDDALLAFEQMQYA-GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
K AL F +M G P+ +T+VN L CA G +G +H F + ++ +G
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
L+DMYAKCG ++E VFS++ K+V +WNA++ G + E+A+RLF +M+++ ++
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 337 ADEVTLLAVLSACNHSGL 354
D VT A +S GL
Sbjct: 328 MDVVTWSAAISGYAQRGL 345
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 168/372 (45%), Gaps = 53/372 (14%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRN-TILPNHYTFPFLFKSLSAPCHFAQAQ 156
V +NS+I +++ L +F+ M P++ T + ++ + +
Sbjct: 193 VVSWNSIIESYAKLGKPK---VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
+H + + +++V N L+ +YA + +F M+ +DVVSW M+ G+
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCG-MMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 217 GKFDDALLAFEQMQ-----------------YA------------------GVAPNRVTM 241
G+F+DA+ FE+MQ YA G+ PN VT+
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 242 VNALAACADSGAVEMGAWIHDF-------IRRNGWELDVVLGTALIDMYAKCGRVEEGVR 294
++ L+ CA GA+ G IH + +R+NG + ++ LIDMYAKC +V+
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 295 VFSSV--KEKNVFTWNAVIKGLALAKSGEEAIRLFNRM-EQD-GVRADEVTLLAVLSACN 350
+F S+ KE++V TW +I G + +A+ L + M E+D R + T+ L AC
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 351 HSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAM 410
+ +G+QI + + + +P + C++D+ A+ GS+ +A V M +
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVT 546
Query: 411 WGSLLVSSKSQG 422
W SL+ G
Sbjct: 547 WTSLMTGYGMHG 558
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 135/303 (44%), Gaps = 14/303 (4%)
Query: 138 TFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQL 194
T PF+ K + +Q + +H +L G L + + + L+ Y + L SL R+
Sbjct: 31 TPPFIHKCKT----ISQVKLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRF 85
Query: 195 FDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAV 254
+ V W +I + + G + L F M P+ T AC + +V
Sbjct: 86 --PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSV 143
Query: 255 EMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGL 314
G H G+ +V +G AL+ MY++C + + +VF + +V +WN++I+
Sbjct: 144 RCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY 203
Query: 315 ALAKSGEEAIRLFNRMEQD-GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFI 373
A + A+ +F+RM + G R D +TL+ VL C G +G+Q+ F V + I
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE--MI 261
Query: 374 PNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARK 433
N+ C+VD+ A+ G + EA V M + W +++ G E + + K
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS-WNAMVAGYSQIGRFEDAVRLFEK 320
Query: 434 LVE 436
+ E
Sbjct: 321 MQE 323
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 216/388 (55%), Gaps = 8/388 (2%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
+ ++ ++I ++H+ + +L S+F M I PN T + + +S
Sbjct: 308 LVMWTAMIVGYTHNGSVNEAL---SLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VH +K+G + D V N+L+ +YA + + +F+ + +D+V+W +I GF G
Sbjct: 365 VHGLSIKVG-IWDTNVANALVHMYAKCYQNRD-AKYVFEMESEKDIVAWNSIISGFSQNG 422
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW--ELDVVL 275
+AL F +M V PN VT+ + +ACA G++ +G+ +H + + G+ V +
Sbjct: 423 SIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV 482
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
GTAL+D YAKCG + +F +++EKN TW+A+I G ++ LF M +
Sbjct: 483 GTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ 542
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+ +E T ++LSAC H+G+V+ G++ F + + Y F P+ KHY CMVD+LAR+G L +A
Sbjct: 543 KPNESTFTSILSACGHTGMVNEGKKYFSSMYK-DYNFTPSTKHYTCMVDMLARAGELEQA 601
Query: 396 FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEM 455
+++ MP P +G+ L + E V +K+++L P +++YYV +SNLYA
Sbjct: 602 LDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASD 661
Query: 456 GRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
GRW+ ++VR +MK R L+K G S++E
Sbjct: 662 GRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 160/342 (46%), Gaps = 9/342 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P P +++ ++R + + S+ + ++ + ++ + F K+ +
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKE---SVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDL 158
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H ++K+ ++ V LL +YA + S ++F+++T R+VV WT MI G
Sbjct: 159 DNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKS-AHKVFNDITLRNVVCWTSMIAG 216
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ ++ L+ F +M+ V N T + AC A+ G W H + ++G EL
Sbjct: 217 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 276
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
L T+L+DMY KCG + RVF+ ++ W A+I G S EA+ LF +M+
Sbjct: 277 SCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKG 336
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
++ + VT+ +VLS C +++GR + G + K G I + +V + A+
Sbjct: 337 VEIKPNCVTIASVLSGCGLIENLELGRSVHGLSI--KVG-IWDTNVANALVHMYAKCYQN 393
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKL 434
R+A V M + W S++ G + + F+ ++
Sbjct: 394 RDAKYVFE-MESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 261 HDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSG 320
H + NG D+ + T L+ +Y G ++ VF + E + + W +++ L K
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 321 EEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA 380
E ++L++ + + G R D++ L AC +D G++I LV+ +P+ +
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK-----VPSFDNVV 178
Query: 381 C--MVDLLARSGSLREAFEV 398
++D+ A+ G ++ A +V
Sbjct: 179 LTGLLDMYAKCGEIKSAHKV 198
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 214/393 (54%), Gaps = 16/393 (4%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLF----KSLSAPCHFAQAQ 156
+ +LI F+H L M++ +L N P+ ++ ++ +
Sbjct: 181 WTTLITGFTHLGDGIGGL-------KMYKQMLLENAEVTPYCITIAVRASASIDSVTTGK 233
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
+HA V+K G ++ V NS+L +Y L S + F EM +D+++W +I +
Sbjct: 234 QIHASVIKRGFQSNLPVMNSILDLYCRCGYL-SEAKHYFHEMEDKDLITWNTLISELERS 292
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
+ALL F++ + G PN T + +AACA+ A+ G +H I R G+ +V L
Sbjct: 293 DS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 277 TALIDMYAKCGRVEEGVRVFSS-VKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
ALIDMYAKCG + + RVF V +N+ +W +++ G G EA+ LF++M G+
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
R D + +AVLSAC H+GLV+ G + F ++E +YG P+ Y C+VDLL R+G + EA
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKGLKYFN-VMESEYGINPDRDIYNCVVDLLGRAGKIGEA 470
Query: 396 FEVMRCMPFDPTKAMWGSLLVSSKS-QGDLEFSEFVARKLVELEPANSAYYVHLSNLYAE 454
+E++ MPF P ++ WG++L + K+ + + S ARK++EL+P YV LS +YA
Sbjct: 471 YELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAA 530
Query: 455 MGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
G+W D +VR MM+ K+ G S + VE Q
Sbjct: 531 EGKWVDFARVRKMMRMMGNKKEAGMSWILVENQ 563
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 164/332 (49%), Gaps = 10/332 (3%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V + ++I ++ S+++ + F M + PN +T + KS
Sbjct: 71 MPDRDVVAWTAMITGYASSNYNARAW---ECFHEMVKQGTSPNEFTLSSVLKSCRNMKVL 127
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
A VH V+KLG +YV N+++ +YA +F ++ ++ V+WT +I G
Sbjct: 128 AYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITG 187
Query: 213 FRNAGKFDDALLAFEQM--QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
F + G L ++QM + A V P +T+ A+ A A +V G IH + + G++
Sbjct: 188 FTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASIDSVTTGKQIHASVIKRGFQ 245
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
++ + +++D+Y +CG + E F +++K++ TWN +I L + S EA+ +F R
Sbjct: 246 SNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRF 304
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
E G + T ++++AC + ++ G+Q+ G + + GF NV+ ++D+ A+ G
Sbjct: 305 ESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIF--RRGFNKNVELANALIDMYAKCG 362
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
++ ++ V + W S+++ S G
Sbjct: 363 NIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 118/257 (45%), Gaps = 14/257 (5%)
Query: 187 LFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALA 246
L R LFDEM RDVV+WT MI G+ ++ A F +M G +PN T+ + L
Sbjct: 60 LVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLK 119
Query: 247 ACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCG-RVEEGVRVFSSVKEKNVF 305
+C + + GA +H + + G E + + A+++MYA C +E +F +K KN
Sbjct: 120 SCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDV 179
Query: 306 TWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVD---MGRQIF 362
TW +I G G ++++ +M + EVT + A S +D G+QI
Sbjct: 180 TWTTLITGFTHLGDGIGGLKMYKQMLLENA---EVTPYCITIAVRASASIDSVTTGKQIH 236
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLV----SS 418
++ K GF N+ ++DL R G L EA M D W +L+ S
Sbjct: 237 ASVI--KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWNTLISELERSD 293
Query: 419 KSQGDLEFSEFVARKLV 435
S+ L F F ++ V
Sbjct: 294 SSEALLMFQRFESQGFV 310
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 118/264 (44%), Gaps = 9/264 (3%)
Query: 51 QQIQAQLILHNLQSNPTIAHHFITV-CQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFS 109
+QI A +I QSN + + + + C+ + + +N+LI
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRC--GYLSEAKHYFHEMEDKDLITWNTLISELE 290
Query: 110 HSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLH 169
S +S L +F +PN YTF L + + Q +H + + G
Sbjct: 291 RS----DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 170 DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM 229
++ + N+L+ +YA + R + + R++VSWT M++G+ + G +A+ F++M
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 230 QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRN-GWELDVVLGTALIDMYAKCGR 288
+G+ P+R+ + L+AC +G VE G + + G D + ++D+ + G+
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 289 VEEGVRVFSSVKEK-NVFTWNAVI 311
+ E + + K + TW A++
Sbjct: 467 IGEAYELVERMPFKPDESTWGAIL 490
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 187/334 (55%), Gaps = 4/334 (1%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
F H LK G + D+Y+ +SL+ +Y S + + ++F+EM R+VVSWT MI
Sbjct: 136 FRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVEN-AYKVFEEMPERNVVSWTAMIS 194
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
GF + D L + +M+ + PN T L+AC SGA+ G +H G +
Sbjct: 195 GFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKS 254
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN-RM 330
+ + +LI MY KCG +++ R+F K+V +WN++I G A +AI LF M
Sbjct: 255 YLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMM 314
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
+ G + D +T L VLS+C H+GLV GR+ F + E +G P + HY+C+VDLL R G
Sbjct: 315 PKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE--HGLKPELNHYSCLVDLLGRFG 372
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSN 450
L+EA E++ MP P +WGSLL S + GD+ A + + LEP +A +V L+N
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLAN 432
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
LYA +G W + VR +MKD+ L + GCS +E+
Sbjct: 433 LYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEI 466
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 110/221 (49%), Gaps = 6/221 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P +V + ++I F+ L +++ M ++T PN YTF L + +
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVD---ICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
Q +SVH L +G +++ NSL+ +Y L R +FD+ +++DVVSW MI G
Sbjct: 238 GQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR-IFDQFSNKDVVSWNSMIAG 296
Query: 213 FRNAGKFDDALLAFE-QMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ G A+ FE M +G P+ +T + L++C +G V+ G + + +G +
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK-NVFTWNAVI 311
++ + L+D+ + G ++E + + ++ K N W +++
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
+ +A+ +C + G+ H + G+ DV LG++L+ +Y G VE +VF +
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
E+NV +W A+I G A + ++L+++M + ++ T A+LSAC SG + GR
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRS 242
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
+ + G + ++ + + G L++AF +
Sbjct: 243 VHCQTLH--MGLKSYLHISNSLISMYCKCGDLKDAFRI 278
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 197/333 (59%), Gaps = 2/333 (0%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
+ + VH + +K G + D+ V N+++ YA L RQ F E+ +DV+S+ +I
Sbjct: 324 LSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQ-FSEIGLKDVISYNSLIT 382
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G + +++ F +M+ +G+ P+ T++ L AC+ A+ G+ H + +G+ +
Sbjct: 383 GCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAV 442
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+ + AL+DMY KCG+++ RVF ++ ++++ +WN ++ G + G+EA+ LFN M+
Sbjct: 443 NTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQ 502
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ GV DEVTLLA+LSAC+HSGLVD G+Q+F + G + IP + HY CM DLLAR+G
Sbjct: 503 ETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGY 562
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNL 451
L EA++ + MPF+P + G+LL + + + E V++K+ L + V LSN
Sbjct: 563 LDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNT 621
Query: 452 YAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
Y+ RW+D ++R + K R L K G S V+V
Sbjct: 622 YSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 154/316 (48%), Gaps = 15/316 (4%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTP-LSIFAHMHR-NTILPNHYTFPFLFKSLSAPC 150
+P+ + +N++I FS H LT + +F M R + + PN T +F +L
Sbjct: 164 MPKRDMVAWNAMISGFSL----HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ ++VH + ++G +D+ V +L VYA S + R++FD ++ V+W+ MI
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS-KCIIYARRVFDLDFKKNEVTWSAMI 278
Query: 211 MGFRNAGKFDDALLAFEQM----QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRR 266
G+ +A F QM A V P + ++ L CA G + G +H + +
Sbjct: 279 GGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVK 336
Query: 267 NGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRL 326
G+ LD+ + +I YAK G + + R FS + K+V ++N++I G + EE+ RL
Sbjct: 337 AGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRL 396
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
F+ M G+R D TLL VL+AC+H + G G+ V +G+ N ++D+
Sbjct: 397 FHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCV--VHGYAVNTSICNALMDMY 454
Query: 387 ARSGSLREAFEVMRCM 402
+ G L A V M
Sbjct: 455 TKCGKLDVAKRVFDTM 470
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 150/307 (48%), Gaps = 9/307 (2%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
PR + ++ +IRA++ + +L ++ M + + P YT+PF+ K+ +
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKAL---DLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+ +H+HV D+YV +L+ YA L + ++FDEM RD+V+W MI GF
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGEL-EMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 214 RNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
D + F M + G++PN T+V A +GA+ G +H + R G+ D
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM-- 330
+V+ T ++D+YAK + RVF +KN TW+A+I G + +EA +F +M
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
+ V + +L C G + GR + + V K GFI ++ ++ A+ G
Sbjct: 300 NDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAV--KAGFILDLTVQNTIISFYAKYG 357
Query: 391 SLREAFE 397
SL +AF
Sbjct: 358 SLCDAFR 364
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 150/312 (48%), Gaps = 18/312 (5%)
Query: 142 LFKSLSAPC----HFAQAQSVHAHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFD 196
+F SL C + Q +H H+LK L V +L +YA+ + L R +FD
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEV-ELARHVFD 59
Query: 197 EMTHRDV--VSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAV 254
E+ H + ++W +MI + + + AL + +M +GV P + T L ACA A+
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 255 EMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGL 314
+ G IH + + + D+ + TAL+D YAKCG +E ++VF + ++++ WNA+I G
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 315 ALAKSGEEAIRLFNRMEQ-DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFI 373
+L + I LF M + DG+ + T++ + A +G + G+ + G+ + GF
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCT--RMGFS 237
Query: 374 PNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSS------KSQGDLEFS 427
++ ++D+ A+S + A V + F + W +++ K G++ F
Sbjct: 238 NDLVVKTGILDVYAKSKCIIYARRVFD-LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQ 296
Query: 428 EFVARKLVELEP 439
V + + P
Sbjct: 297 MLVNDNVAMVTP 308
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 207/397 (52%), Gaps = 6/397 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P+ + +LI +S H L F M R PN +T + K+ +A
Sbjct: 121 MPQRDFVTWTTLISGYSQ---HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+H +K G +++V ++LL +Y L + +FD + R+ VSW +I G
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG-LMDDAQLVFDALESRNDVSWNALIAG 236
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ AL F+ M G P+ + + AC+ +G +E G W+H ++ ++G +L
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
G L+DMYAK G + + ++F + +++V +WN+++ A G+EA+ F M +
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
G+R +E++ L+VL+AC+HSGL+D G + + K G +P HY +VDLL R+G L
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELM--KKDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
A + MP +PT A+W +LL + + + E + A + EL+P + +V L N+Y
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
A GRW+D +VR MK+ + K+ CS VE+E H
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIH 511
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 153/294 (52%), Gaps = 16/294 (5%)
Query: 130 NTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFS 189
NT+L F L Q + VHAH+L+ HDI + N+LL +YA L
Sbjct: 64 NTLLKKCTVFKLLI----------QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSL-E 112
Query: 190 LCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACA 249
R++F++M RD V+WT +I G+ + DALL F QM G +PN T+ + + A A
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
Query: 250 DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA 309
G +H F + G++ +V +G+AL+D+Y + G +++ VF +++ +N +WNA
Sbjct: 173 AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNA 232
Query: 310 VIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK 369
+I G A E+A+ LF M +DG R + ++ AC+ +G ++ G+ + ++++
Sbjct: 233 LIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 370 YGFIPNVKHYACMVDLLARSGSLREAFEVM-RCMPFDPTKAMWGSLLVSSKSQG 422
+ + ++D+ A+SGS+ +A ++ R D W SLL + G
Sbjct: 293 EKLVAFAGN--TLLDMYAKSGSIHDARKIFDRLAKRDVVS--WNSLLTAYAQHG 342
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 209/389 (53%), Gaps = 5/389 (1%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+NS+I + S + + + +F M +H T+ L + + +H+
Sbjct: 376 WNSIISGYIQSG---DLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
+ +K G D+ V N+L+ +YA + ++F M D V+W +I G F
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGD-SLKIFSSMGTGDTVTWNTVISACVRFGDFA 491
Query: 221 DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALI 280
L QM+ + V P+ T + L CA A +G IH + R G+E ++ +G ALI
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551
Query: 281 DMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEV 340
+MY+KCG +E RVF + ++V TW +I + GE+A+ F ME+ G+ D V
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
+A++ AC+HSGLVD G F + + Y P ++HYAC+VDLL+RS + +A E ++
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFEKM-KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670
Query: 401 CMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDD 460
MP P ++W S+L + ++ GD+E +E V+R+++EL P + Y + SN YA + +WD
Sbjct: 671 AMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDK 730
Query: 461 VEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
V +R +KD+ +TK+ G S +EV + H
Sbjct: 731 VSLIRKSLKDKHITKNPGYSWIEVGKNVH 759
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 175/334 (52%), Gaps = 14/334 (4%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTP--LSIFAHMHRNTILPNHYTFPFLFKSLSAPCH 151
P +V+++NS+IRAFS N L P L + + + + P+ YTFP + K+ +
Sbjct: 67 PAKNVYLWNSIIRAFSK-----NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFD 121
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
V+ +L +G D++V N+L+ +Y+ L + RQ+FDEM RD+VSW +I
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMG-LLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G+ + G +++AL + +++ + + P+ T+ + L A + V+ G +H F ++G
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
VV+ L+ MY K R + RVF + ++ ++N +I G + EE++R+F +E
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LE 298
Query: 332 Q-DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
D + D +T+ +VL AC H + + + I+ +++ K GF+ ++D+ A+ G
Sbjct: 299 NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYML--KAGFVLESTVRNILIDVYAKCG 356
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDL 424
+ A +V M T + W S++ GDL
Sbjct: 357 DMITARDVFNSMECKDTVS-WNSIISGYIQSGDL 389
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 160/333 (48%), Gaps = 10/333 (3%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + +NSLI +S SH ++ L I+ + + I+P+ +T + +
Sbjct: 167 MPVRDLVSWNSLISGYS-SHGYYEE--ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
Q Q +H LK G + V+N L+ +Y R R++FDEM RD VS+ MI G
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD-ARRVFDEMDVRDSVSYNTMICG 282
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ ++++ F + P+ +T+ + L AC + + +I++++ + G+ L+
Sbjct: 283 YLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLE 341
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ LID+YAKCG + VF+S++ K+ +WN++I G + EA++LF M
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEG-KYGFIPNVKHYACMVDLLARSGS 391
+AD +T L ++S + G+ G G K G ++ ++D+ A+ G
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGK---GLHSNGIKSGICIDLSVSNALIDMYAKCGE 458
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDL 424
+ ++ ++ M T W +++ + GD
Sbjct: 459 VGDSLKIFSSMGTGDT-VTWNTVISACVRFGDF 490
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 121/248 (48%), Gaps = 3/248 (1%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
A+ ++ ++LK G + + V N L+ VYA + + R +F+ M +D VSW +I G+
Sbjct: 326 AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMIT-ARDVFNSMECKDTVSWNSIISGYI 384
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
+G +A+ F+ M + +T + ++ ++ G +H ++G +D+
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS 444
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+ ALIDMYAKCG V + +++FSS+ + TWN VI +++ +M +
Sbjct: 445 VSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE 504
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
V D T L L C +G++I L+ ++G+ ++ ++++ ++ G L
Sbjct: 505 VVPDMATFLVTLPMCASLAAKRLGKEIHCCLL--RFGYESELQIGNALIEMYSKCGCLEN 562
Query: 395 AFEVMRCM 402
+ V M
Sbjct: 563 SSRVFERM 570
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 122/231 (52%), Gaps = 6/231 (2%)
Query: 140 PFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYA---ASPRLFSLCRQLFD 196
PF+ ++LS+ + + + +HA V+ LG + L+ Y+ S+ R++
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV-- 65
Query: 197 EMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEM 256
++V W +I F G F +AL + +++ + V+P++ T + + ACA EM
Sbjct: 66 -SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 257 GAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLAL 316
G +++ I G+E D+ +G AL+DMY++ G + +VF + +++ +WN++I G +
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 317 AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVE 367
EEA+ +++ ++ + D T+ +VL A + +V G+ + GF ++
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 194/331 (58%), Gaps = 3/331 (0%)
Query: 160 AHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT-HRDVVSWTVMIMGFRNAGK 218
+H K+ + + +++ Y + ++ L +F +MT ++++V+W MI G+ +
Sbjct: 206 SHFFKVAPVRGVVAWTAMITGYMKAKKV-ELAEAMFKDMTVNKNLVTWNAMISGYVENSR 264
Query: 219 FDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTA 278
+D L F M G+ PN + +AL C++ A+++G IH + ++ DV T+
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS 324
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRAD 338
LI MY KCG + + ++F +K+K+V WNA+I G A + ++A+ LF M + +R D
Sbjct: 325 LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 384
Query: 339 EVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
+T +AVL ACNH+GLV++G F +V Y P HY CMVDLL R+G L EA ++
Sbjct: 385 WITFVAVLLACNHAGLVNIGMAYFESMVR-DYKVEPQPDHYTCMVDLLGRAGKLEEALKL 443
Query: 399 MRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRW 458
+R MPF P A++G+LL + + ++E +EF A KL++L N+A YV L+N+YA RW
Sbjct: 444 IRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRW 503
Query: 459 DDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+DV +VR MK+ + K G S +E+ + H
Sbjct: 504 EDVARVRKRMKESNVVKVPGYSWIEIRNKVH 534
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 117/295 (39%), Gaps = 45/295 (15%)
Query: 175 NSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGV 234
NSLL + P QLFDE+ D S+ +M+ + F+ A F++M +
Sbjct: 96 NSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDA 155
Query: 235 APNRVTMVNALAACADSGAVEMGAWI-HDFIRRNGWELDVVLGTALIDMYAKCGRVEEGV 293
A TM+ A G +E + + + +N V A+I Y +CG +E+
Sbjct: 156 ASWN-TMITGYAR---RGEMEKARELFYSMMEKNE-----VSWNAMISGYIECGDLEKAS 206
Query: 294 RVFSSVK--------------------------------EKNVFTWNAVIKGLALAKSGE 321
F KN+ TWNA+I G E
Sbjct: 207 HFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPE 266
Query: 322 EAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC 381
+ ++LF M ++G+R + L + L C+ + +GRQI + K +V
Sbjct: 267 DGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV--SKSTLCNDVTALTS 324
Query: 382 MVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE 436
++ + + G L +A+++ M A W +++ G+ + + + R++++
Sbjct: 325 LISMYCKCGELGDAWKLFEVMKKKDVVA-WNAMISGYAQHGNADKALCLFREMID 378
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 243/473 (51%), Gaps = 34/473 (7%)
Query: 35 RAVTLLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVP 94
R ++LL+ + + +QI AQL+++ N C P
Sbjct: 9 RFLSLLQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFP 68
Query: 95 R---PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILP--NHYTFPFLFKSLSAP 149
R P F+FN+L++ + IFA+ + L N TF F+ + +
Sbjct: 69 RFGHPDKFLFNTLLKCSKPEDS-------IRIFANYASKSSLLYLNERTFVFVLGACARS 121
Query: 150 CHFAQ---AQSVHAHVLKLGHLHDI-YVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVS 205
+ + VH V KLG L++ + +LL YA + L R++FDEM R V+
Sbjct: 122 ASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDL-RYARKVFDEMPERTSVT 180
Query: 206 WTVMIMGF---RNAGKFD--DALLAFEQMQY--AGVAPNRVTMVNALAACADSGAVEMGA 258
W MI G+ ++ G + A++ F + +GV P TMV L+A + +G +E+G+
Sbjct: 181 WNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGS 240
Query: 259 WIHDFIRRNGW--ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLAL 316
+H +I + G+ E+DV +GTAL+DMY+KCG + VF +K KNVFTW ++ GLAL
Sbjct: 241 LVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLAL 300
Query: 317 AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNV 376
G E L NRM + G++ +E+T ++LSA H GLV+ G ++F + + ++G P +
Sbjct: 301 NGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSM-KTRFGVTPVI 359
Query: 377 KHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE 436
+HY C+VDLL ++G ++EA++ + MP P + SL + G+ E + + L+E
Sbjct: 360 EHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLE 419
Query: 437 LEPANSAY-------YVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
+E + YV LSN+ A G+W +VEK+R MK+R++ G S V
Sbjct: 420 IEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 224/406 (55%), Gaps = 21/406 (5%)
Query: 93 VPRPHVFIFNSLIRAFSHSHH-------HHNSLTPLSIFAHMHRNTILPNHYTFPFLFKS 145
+P+P +N++IR F+ S H + + L S + + R L +T ++
Sbjct: 63 IPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARA 122
Query: 146 LSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVS 205
L C A Q +H + + G D + +LL Y+ + L S +LFDEM RDV S
Sbjct: 123 L---CSSAMDQ-LHCQINRRGLSADSLLCTTLLDAYSKNGDLIS-AYKLFDEMPVRDVAS 177
Query: 206 WTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWI-HDFI 264
W +I G + + +A+ +++M+ G+ + VT+V AL AC+ G V+ G I H +
Sbjct: 178 WNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS 237
Query: 265 RRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSS-VKEKNVFTWNAVIKGLALAKSGEEA 323
N V++ A IDMY+KCG V++ +VF +K+V TWN +I G A+ A
Sbjct: 238 NDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRA 292
Query: 324 IRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMV 383
+ +F+++E +G++ D+V+ LA L+AC H+GLV+ G +F + G N+KHY C+V
Sbjct: 293 LEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNM--ACKGVERNMKHYGCVV 350
Query: 384 DLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSA 443
DLL+R+G LREA +++ M P +W SLL +S+ D+E +E +R++ E+ N
Sbjct: 351 DLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDG 410
Query: 444 YYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+V LSN+YA GRW DV +VR M+ +Q+ K G S +E + H
Sbjct: 411 DFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIH 456
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 17/308 (5%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASP-RLFSLCRQLFDEMTHRDVVSWTVMI 210
F+Q + + +H L GH ++ + LL A SP S Q+F + W +I
Sbjct: 16 FSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAII 75
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALA------ACADSGAVEMGAWIHDFI 264
GF + A + M + + + V+AL ACA + +H I
Sbjct: 76 RGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQI 135
Query: 265 RRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAI 324
R G D +L T L+D Y+K G + ++F + ++V +WNA+I GL EA+
Sbjct: 136 NRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAM 195
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFI-PNVKHYACMV 383
L+ RME +G+R EVT++A L AC+H G V G IF +G+ NV +
Sbjct: 196 ELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF-------HGYSNDNVIVSNAAI 248
Query: 384 DLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE--LEPAN 441
D+ ++ G + +A++V + W +++ G+ + + KL + ++P +
Sbjct: 249 DMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDD 308
Query: 442 SAYYVHLS 449
+Y L+
Sbjct: 309 VSYLAALT 316
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 213/400 (53%), Gaps = 11/400 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V + +L ++ S H ++ +F M + P+ Y F+ + LSA H
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAI---DLFKKMVEMGVKPDSY---FIVQVLSACVHV 225
Query: 153 AQAQS---VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVM 209
S + ++ ++ + +V +L+ +YA ++ R +FD M +D+V+W+ M
Sbjct: 226 GDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKM-EKARSVFDSMVEKDIVTWSTM 284
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
I G+ + + + F QM + P++ ++V L++CA GA+++G W I R+ +
Sbjct: 285 IQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF 344
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
++ + ALIDMYAKCG + G VF +KEK++ NA I GLA + + +F +
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
E+ G+ D T L +L C H+GL+ G + F + Y V+HY CMVDL R+
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN-AISCVYALKRTVEHYGCMVDLWGRA 463
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLS 449
G L +A+ ++ MP P +WG+LL + D + +E V ++L+ LEP N+ YV LS
Sbjct: 464 GMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLS 523
Query: 450 NLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
N+Y+ GRWD+ +VR MM + + K G S +E+E + H
Sbjct: 524 NIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVH 563
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 191/350 (54%), Gaps = 7/350 (2%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P++F++NSLI F ++H H +L +F + ++ + + +TFP + K+ +
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETL---DLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLG 130
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
+H+ V+K G HD+ SLL +Y+ S RL + +LFDE+ R VV+WT + G+
Sbjct: 131 IDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL-NDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
+G+ +A+ F++M GV P+ +V L+AC G ++ G WI ++ + + +
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
T L+++YAKCG++E+ VF S+ EK++ TW+ +I+G A +E I LF +M Q+ +
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+ D+ +++ LS+C G +D+G +G + ++ F+ N+ ++D+ A+ G++
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGE--WGISLIDRHEFLTNLFMANALIDMYAKCGAMARG 367
Query: 396 FEVMRCMPFDPTKAMWGSLL-VSSKSQGDLEFSEFVARKLVELEPANSAY 444
FEV + M M ++ ++ L F+ F + + + P S +
Sbjct: 368 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTF 417
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 185/320 (57%), Gaps = 4/320 (1%)
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
D+ N++L YA + C ++FD+M R+V SW +I G+ G+ + L +F++
Sbjct: 119 RDVMSWNTVLEGYANIGDM-EACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKR 177
Query: 229 MQYAG-VAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW-ELDVVLGTALIDMYAKC 286
M G V PN TM L+ACA GA + G W+H + G+ ++DV + ALIDMY KC
Sbjct: 178 MVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKC 237
Query: 287 GRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVL 346
G +E + VF +K +++ +WN +I GLA G EA+ LF+ M+ G+ D+VT + VL
Sbjct: 238 GAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
Query: 347 SACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDP 406
AC H GLV+ G F + + +P ++H C+VDLL+R+G L +A E + MP
Sbjct: 298 CACKHMGLVEDGLAYFNSMFT-DFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKA 356
Query: 407 TKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRG 466
+W +LL +SK ++ E +L++LEP N A +V LSN+Y + GR+DD +++
Sbjct: 357 DAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKV 416
Query: 467 MMKDRQLTKDLGCSSVEVEE 486
M+D K+ G S +E ++
Sbjct: 417 AMRDTGFKKEAGVSWIETDD 436
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 217/401 (54%), Gaps = 37/401 (9%)
Query: 124 FAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS--VHAHVLKLG-HLHDIYVHNSLLGV 180
F+ M + PNH TF L ++A +H + KLG + + V +++G+
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 181 YAASPRLFSLCR-------------------------------QLFDEMTHRDVVSWTVM 209
Y+ R F R ++FD+M RD++SWT M
Sbjct: 119 YSKRGR-FKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAM 177
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
I GF G ++ALL F +MQ +GV P+ V ++ AL AC + GA+ G W+H ++ +
Sbjct: 178 INGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDF 237
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
+ +V + +LID+Y +CG VE +VF +++++ V +WN+VI G A + E++ F +
Sbjct: 238 KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRK 297
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
M++ G + D VT L+AC+H GLV+ G + F +++ Y P ++HY C+VDL +R+
Sbjct: 298 MQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQ-IMKCDYRISPRIEHYGCLVDLYSRA 356
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG-DLEFSEFVARKLVELEPANSAYYVHL 448
G L +A ++++ MP P + + GSLL + + G ++ +E + + L +L + + YV L
Sbjct: 357 GRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVIL 416
Query: 449 SNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
SN+YA G+W+ K+R MK L K G SS+E+++ H
Sbjct: 417 SNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMH 457
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 42/288 (14%)
Query: 183 ASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
A+P++ Q ++ T VSWT I G+ +A F M AGV PN +T +
Sbjct: 21 ANPKI-----QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFI 75
Query: 243 NALAACAD--SGAVEMGAWIHDFIRRNGWELD-VVLGTALIDMYAKCGRVEEGVRVFSSV 299
L+ C D SG+ +G +H + + G + + V++GTA+I MY+K GR ++ VF +
Sbjct: 76 ALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYM 135
Query: 300 KEKNVFTWNAVIKGL-----------------------------ALAKSG--EEAIRLFN 328
++KN TWN +I G K G EEA+ F
Sbjct: 136 EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFR 195
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
M+ GV+ D V ++A L+AC + G + G + +++ F NV+ ++DL R
Sbjct: 196 EMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQD--FKNNVRVSNSLIDLYCR 253
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE 436
G + A +V M T W S++V + G+ S RK+ E
Sbjct: 254 CGCVEFARQVFYNME-KRTVVSWNSVIVGFAANGNAHESLVYFRKMQE 300
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 205/391 (52%), Gaps = 3/391 (0%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + +NSLI +S + LS + PN TF + +
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMM-ISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ + +H V+K G L ++ V N+ + Y + L S C+ LF++++ +++VSW MI+
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCK-LFEDLSIKNLVSWNTMIVI 209
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
G + L F + G P++ T + L +C D G V + IH I G+ +
Sbjct: 210 HLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ TAL+D+Y+K GR+E+ VF + + W A++ A G +AI+ F M
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
G+ D VT +L+AC+HSGLV+ G+ F + + +Y P + HY+CMVDLL RSG L
Sbjct: 330 YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSK-RYRIDPRLDHYSCMVDLLGRSGLL 388
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
++A+ +++ MP +P+ +WG+LL + + D + A +L ELEP + YV LSN+Y
Sbjct: 389 QDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIY 448
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
+ G W D ++R +MK + L + GCS +E
Sbjct: 449 SASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 20/274 (7%)
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRL-FSLC-RQLFDEMTHRDVVSWTVMIMGFRN 215
+H V+K ++ + L+G Y RL +C +LFDEM RD+VSW +I G+
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYL---RLGHDVCAEKLFDEMPERDLVSWNSLISGYSG 109
Query: 216 AGKFDDALLAFEQMQYA--GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
G +M + G PN VT ++ ++AC G+ E G IH + + G +V
Sbjct: 110 RGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEV 169
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVI-----KGLALAKSGEEAIRLFN 328
+ A I+ Y K G + ++F + KN+ +WN +I GLA E+ + FN
Sbjct: 170 KVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLA-----EKGLAYFN 224
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
+ G D+ T LAVL +C G+V + + I G ++ G GF N ++DL ++
Sbjct: 225 MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG--GFSGNKCITTALLDLYSK 282
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
G L ++ V + P W ++L + + G
Sbjct: 283 LGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHG 315
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 217/421 (51%), Gaps = 37/421 (8%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+N++I + + + +L + M + I + +T+P + ++ + + VHA
Sbjct: 254 YNAMISGYVNRGFYQEAL---EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
+VL+ + NSL+ +Y + F R +F++M +D+VSW ++ G+ ++G
Sbjct: 311 YVLRREDF-SFHFDNSLVSLYYKCGK-FDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 221 DALLAFEQMQYA-------------------------------GVAPNRVTMVNALAACA 249
+A L F++M+ G P A+ +CA
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 250 DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA 309
GA G H + + G++ + G ALI MYAKCG VEE +VF ++ + +WNA
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488
Query: 310 VIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK 369
+I L G EA+ ++ M + G+R D +TLL VL+AC+H+GLVD GR+ F + E
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM-ETV 547
Query: 370 YGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEF 429
Y P HYA ++DLL RSG +A V+ +PF PT +W +LL + G++E
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGII 607
Query: 430 VARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
A KL L P + Y+ LSN++A G+W++V +VR +M+DR + K++ CS +E+E Q H
Sbjct: 608 AADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVH 667
Query: 490 T 490
T
Sbjct: 668 T 668
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 167/390 (42%), Gaps = 74/390 (18%)
Query: 100 IFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLS-APCHFAQAQSV 158
++N++I FSH +++ + +++F M P+++TF + L+ Q
Sbjct: 115 MYNAMITGFSH---NNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 159 HAHVLKLGHLHDIYVHNSLLGVY---AASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
HA LK G + V N+L+ VY A+SP L R++FDE+ +D SWT M+ G+
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 216 AGKFD--------------------------------DALLAFEQMQYAGVAPNRVTMVN 243
G FD +AL +M +G+ + T +
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 244 ALAACADSGAVEMGAWIHDFI-RRNGWEL-----------------------------DV 273
+ ACA +G +++G +H ++ RR + D+
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDL 351
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
V AL+ Y G + E +F +KEKN+ +W +I GLA GEE ++LF+ M+++
Sbjct: 352 VSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE 411
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
G + + +C G G+Q L+ K GF ++ ++ + A+ G +
Sbjct: 412 GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL--KIGFDSSLSAGNALITMYAKCGVVE 469
Query: 394 EAFEVMRCMP-FDPTKAMWGSLLVSSKSQG 422
EA +V R MP D W +L+ + G
Sbjct: 470 EARQVFRTMPCLDSVS--WNALIAALGQHG 497
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 139/354 (39%), Gaps = 79/354 (22%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTH-------------- 200
A++VH +++ G ++ N L+ VY S L + RQLFDE++
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSEL-NYARQLFDEISEPDKIARTTMVSGYC 91
Query: 201 -------------------RDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTM 241
RD V + MI GF + A+ F +M++ G P+ T
Sbjct: 92 ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151
Query: 242 VNALAACADSGAVEMG-AWIHDFIRRNGWELDVVLGTALIDMYAKCGR----VEEGVRVF 296
+ LA A E H ++G + AL+ +Y+KC + +VF
Sbjct: 152 ASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 297 SSVKEKNVFTW--------------------------------NAVIKGLALAKSGEEAI 324
+ EK+ +W NA+I G +EA+
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK-YGFIPNVKHY-ACM 382
+ RM G+ DE T +V+ AC +GL+ +G+Q+ +++ + + F H+ +
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFDNSL 326
Query: 383 VDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE 436
V L + G EA + MP + W +LL S G + ++ + +++ E
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVS-WNALLSGYVSSGHIGEAKLIFKEMKE 379
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 210/383 (54%), Gaps = 5/383 (1%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+N+LI ++ + ++ +F M + + T L + P + +S+H
Sbjct: 124 YNALISGYTANSKVTDAAY---MFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHG 180
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
+K G ++ V NS + +Y + R+LFDEM + +++W +I G+ G
Sbjct: 181 QCVKGGLDSEVAVLNSFITMYMKCGSV-EAGRRLFDEMPVKGLITWNAVISGYSQNGLAY 239
Query: 221 DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALI 280
D L +EQM+ +GV P+ T+V+ L++CA GA ++G + + NG+ +V + A I
Sbjct: 240 DVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASI 299
Query: 281 DMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEV 340
MYA+CG + + VF + K++ +W A+I + GE + LF+ M + G+R D
Sbjct: 300 SMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGA 359
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
+ VLSAC+HSGL D G ++F + + +Y P +HY+C+VDLL R+G L EA E +
Sbjct: 360 VFVMVLSACSHSGLTDKGLELFRAM-KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 401 CMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDD 460
MP +P A+WG+LL + K +++ +E K++E EP N YYV +SN+Y++ +
Sbjct: 419 SMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEG 478
Query: 461 VEKVRGMMKDRQLTKDLGCSSVE 483
+ ++R MM++R K G S VE
Sbjct: 479 IWRIRVMMRERAFRKKPGYSYVE 501
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 5/285 (1%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
+S++ M R+ P+ ++FPF+ KS ++ Q +H HV K G + +V +L+ +
Sbjct: 38 ISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISM 97
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVS--WTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR 238
Y L + R++F+E +S + +I G+ K DA F +M+ GV+ +
Sbjct: 98 YCKCG-LVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDS 156
Query: 239 VTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSS 298
VTM+ + C + +G +H + G + +V + + I MY KCG VE G R+F
Sbjct: 157 VTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 299 VKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
+ K + TWNAVI G + + + L+ +M+ GV D TL++VLS+C H G +G
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMP 403
++ G LVE GF+PNV + + AR G+L +A V MP
Sbjct: 277 HEV-GKLVESN-GFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 206 WTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIR 265
W V + F +++ + M +G +P+ + L +CA G +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 266 RNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFT--WNAVIKGLALAKSGEEA 323
+ G E + + TALI MY KCG V + +VF + + + +NA+I G +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 324 IRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMV 383
+F RM++ GV D VT+L ++ C + +GR + G V+G G V +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG--GLDSEVAVLNSFI 198
Query: 384 DLLARSGSL---REAFEVMRCMPFDPTKAM--WGSLLVSSKSQGDLEF 426
+ + GS+ R F+ M P K + W + ++S SQ L +
Sbjct: 199 TMYMKCGSVEAGRRLFDEM------PVKGLITWNA-VISGYSQNGLAY 239
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 178/299 (59%), Gaps = 2/299 (0%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADS 251
R++FD M R+ SW +I G +AL F MQ GV P T+++ L+ CA
Sbjct: 285 RRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASL 344
Query: 252 GAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVI 311
++ G +H + R +++DV + + L+ MY KCG + + +F K++ WN++I
Sbjct: 345 ASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII 404
Query: 312 KGLALAKSGEEAIRLFNRMEQDG-VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKY 370
G A GEEA+++F M G + +EVT +A LSAC+++G+V+ G +I+ + E +
Sbjct: 405 SGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM-ESVF 463
Query: 371 GFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFV 430
G P HYACMVD+L R+G EA E++ M +P A+WGSLL + ++ L+ +EF
Sbjct: 464 GVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFC 523
Query: 431 ARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
A+KL+E+EP NS Y+ LSN+YA GRW DV ++R +MK R + K GCS EVE + H
Sbjct: 524 AKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVH 582
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 29/240 (12%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADS 251
R++FDEM+ R V++WT M+ G+ + DDA F+ M V+ + L +
Sbjct: 192 REIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQN 247
Query: 252 GAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVI 311
G +E + + + V+ A+I + G + + RVF S+KE+N +W VI
Sbjct: 248 GRIEDAEELFEVMPVK----PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Query: 312 K-----GLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
K G L EA+ LF M++ GVR TL+++LS C + G+Q+ LV
Sbjct: 304 KIHERNGFEL-----EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 367 EGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFD--PTK--AMWGSLLVSSKSQG 422
++ +V + ++ + + G L V + FD P+K MW S++ S G
Sbjct: 359 RCQFDV--DVYVASVLMTMYIKCGEL-----VKSKLIFDRFPSKDIIMWNSIISGYASHG 411
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 113 HHHN--SLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ---AQSVHAHVLKLGH 167
H N L L +F M + + P TFP L LS A + VHA +++
Sbjct: 306 HERNGFELEALDLFILMQKQGVRP---TFPTLISILSVCASLASLHHGKQVHAQLVRCQF 362
Query: 168 LHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFE 227
D+YV + L+ +Y L + +FD +D++ W +I G+ + G ++AL F
Sbjct: 363 DVDVYVASVLMTMYIKCGELVK-SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 228 QMQYAG-VAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTA-------- 278
+M +G PN VT V L+AC+ +G VE G I++ ++ V G
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE-------SMESVFGVKPITAHYAC 474
Query: 279 LIDMYAKCGRVEEGVRVFSSVK-EKNVFTWNAVI 311
++DM + GR E + + S+ E + W +++
Sbjct: 475 MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 137/330 (41%), Gaps = 76/330 (23%)
Query: 160 AHVLKLGHLHD------------IYVHNSLLGVYAAS--PRLFSLCRQLFDEMTHRDVVS 205
H+ ++G +H+ I NS++ Y A+ PR R+LFDEM R+++S
Sbjct: 25 THLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRD---ARKLFDEMPDRNIIS 81
Query: 206 WTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIR 265
W ++ G+ G+ D+A F+ M P R
Sbjct: 82 WNGLVSGYMKNGEIDEARKVFDLM------PER--------------------------- 108
Query: 266 RNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIR 325
+VV TAL+ Y G+V+ +F + EKN +W ++ G ++A +
Sbjct: 109 ------NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACK 162
Query: 326 LFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
L+ + D + +++ G VD R+IF + E +V + MV
Sbjct: 163 LYEMIPD----KDNIARTSMIHGLCKEGRVDEAREIFDEMSE------RSVITWTTMVTG 212
Query: 386 LARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYY 445
++ + +A ++ MP + T+ W S+L+ G +E +E +L E+ P
Sbjct: 213 YGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIEDAE----ELFEVMPVKPV-- 265
Query: 446 VHLSNLYAEMGRWDDVEKVRGM---MKDRQ 472
+ + + + +G+ ++ K R + MK+R
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERN 295
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 222/398 (55%), Gaps = 6/398 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+ RP +N +I +++ + ++ S+F+ M + +P+ + L + + P
Sbjct: 331 IERPDTASWNVIIAGLANNGYADEAV---SVFSQMRSSGFIPDAISLRSLLCAQTKPMAL 387
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEM-THRDVVSWTVMIM 211
+Q +H++++K G L D+ V NSLL +Y L+ C LF++ + D VSW ++
Sbjct: 388 SQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYC-CFNLFEDFRNNADSVSWNTILT 446
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ + L F+ M + P+ +TM N L C + ++++G+ +H + + G
Sbjct: 447 ACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP 506
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+ + LIDMYAKCG + + R+F S+ ++V +W+ +I G A + GEEA+ LF M+
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK 566
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
G+ + VT + VL+AC+H GLV+ G +++ + + ++G P +H +C+VDLLAR+G
Sbjct: 567 SAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATM-QTEHGISPTKEHCSCVVDLLARAGR 625
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNL 451
L EA + M +P +W +LL + K+QG++ ++ A +++++P NS +V L ++
Sbjct: 626 LNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSM 685
Query: 452 YAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+A G W++ +R MK + K G S +E+E++ H
Sbjct: 686 HASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIH 723
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 180/401 (44%), Gaps = 13/401 (3%)
Query: 23 FDYTLRMSGFSDRAVTLLKDFC-----HSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQ 77
FD+ + S F R T + C S ++I ++ N + + + +H +++
Sbjct: 54 FDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSM-Y 112
Query: 78 SHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHY 137
+P ++ + S+I +S + ++ ++ M + ++P+ +
Sbjct: 113 GKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR---LYLKMLQEDLVPDQF 169
Query: 138 TFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDE 197
F + K+ ++ + +HA V+KL + N+L+ +Y ++ R +F
Sbjct: 170 AFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR-VFYG 228
Query: 198 MTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA-PNRVTMVNALAACADSGAVEM 256
+ +D++SW+ +I GF G +AL ++M GV PN ++L AC+ +
Sbjct: 229 IPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY 288
Query: 257 GAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLAL 316
G+ IH ++ + + G +L DMYA+CG + RVF ++ + +WN +I GLA
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 317 AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNV 376
+EA+ +F++M G D ++L ++L A + G QI +++ K+GF+ ++
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII--KWGFLADL 406
Query: 377 KHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVS 417
++ + L F + + W ++L +
Sbjct: 407 TVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTA 447
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 219 FDDALLAFEQMQYAGVAPNRV-TMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
+ +AL AF+ Q R+ T ++ + AC+ S ++ G IHD I + + D +L
Sbjct: 47 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
++ MY KCG + + VF + E+N+ ++ +VI G + G EAIRL+ +M Q+ +
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 338 DEVTLLAVLSACNHSGLVDMGRQI 361
D+ +++ AC S V +G+Q+
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQL 190
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 209/392 (53%), Gaps = 3/392 (0%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V +FN++I +S L+IF M I P+ TF L ++ ++ ++
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ 475
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
+H + K G DI+ ++L+ VY+ L R +FDEM +D+V W M G+
Sbjct: 476 IHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD-SRLVFDEMKVKDLVIWNSMFAGYVQQS 534
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
+ ++AL F ++Q + P+ T N + A + +V++G H + + G E + +
Sbjct: 535 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
AL+DMYAKCG E+ + F S ++V WN+VI A G++A+++ +M +G+
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
+ +T + VLSAC+H+GLV+ G + F ++ ++G P +HY CMV LL R+G L +A E
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELML--RFGIEPETEHYVCMVSLLGRAGRLNKARE 712
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGR 457
++ MP P +W SLL G++E +E A + +P +S + LSN+YA G
Sbjct: 713 LIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGM 772
Query: 458 WDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
W + +KVR MK + K+ G S + + ++ H
Sbjct: 773 WTEAKKVRERMKVEGVVKEPGRSWIGINKEVH 804
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 159/354 (44%), Gaps = 9/354 (2%)
Query: 48 LHVQQI-QAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIR 106
LH Q + Q+I+ L+ + +++ I + S +P ++ +++++
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINL-YSRAGGMVYARKVFEKMPERNLVSWSTMVS 118
Query: 107 AFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ--SVHAHVLK 164
A +H + SL F +++ PN Y ++ S + + + ++K
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDS--PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVK 176
Query: 165 LGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALL 224
G D+YV L+ Y + R +FD + + V+WT MI G G+ +L
Sbjct: 177 SGFDRDVYVGTLLIDFYLKDGNI-DYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQ 235
Query: 225 AFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYA 284
F Q+ V P+ + L+AC+ +E G IH I R G E+D L LID Y
Sbjct: 236 LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYV 295
Query: 285 KCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLA 344
KCGRV ++F+ + KN+ +W ++ G +EA+ LF M + G++ D +
Sbjct: 296 KCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSS 355
Query: 345 VLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
+L++C + G Q+ + ++ G V + ++D+ A+ L +A +V
Sbjct: 356 ILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN--SLIDMYAKCDCLTDARKV 407
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 147/316 (46%), Gaps = 15/316 (4%)
Query: 117 SLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNS 176
S L +F + + ++P+ Y + + S + +HAH+L+ G D + N
Sbjct: 230 SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV 289
Query: 177 LLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP 236
L+ Y R+ + +LF+ M +++++SWT ++ G++ +A+ F M G+ P
Sbjct: 290 LIDSYVKCGRVIA-AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 237 NRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVF 296
+ + L +CA A+ G +H + + D + +LIDMYAKC + + +VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 297 SSVKEKNVFTWNAVIKGLA-LAKSGE--EAIRLFNRMEQDGVRADEVTLLAVLSACNHSG 353
+V +NA+I+G + L E EA+ +F M +R +T +++L A
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 354 LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTK----A 409
+ + +QI G + KYG ++ + ++D+ + L+++ V FD K
Sbjct: 469 SLGLSKQIHGLMF--KYGLNLDIFAGSALIDVYSNCYCLKDSRLV-----FDEMKVKDLV 521
Query: 410 MWGSLLVSSKSQGDLE 425
+W S+ Q + E
Sbjct: 522 IWNSMFAGYVQQSENE 537
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 207/399 (51%), Gaps = 9/399 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+ R V + +I ++ N+L + M + PN T L
Sbjct: 279 MERRDVITWTCMINGYTEDGDVENALELCRL---MQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H ++ DI + SL+ +YA R+ LC ++F + W+ +I G
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRV-DLCFRVFSGASKYHTGPWSAIIAG 394
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
DAL F++M+ V PN T+ + L A A + IH ++ + G+
Sbjct: 395 CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS 454
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFN 328
+ T L+ +Y+KCG +E ++F+ ++EK +V W A+I G + G A+++F
Sbjct: 455 LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFM 514
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
M + GV +E+T + L+AC+HSGLV+ G +F F++E Y + HY C+VDLL R
Sbjct: 515 EMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE-HYKTLARSNHYTCIVDLLGR 573
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHL 448
+G L EA+ ++ +PF+PT +WG+LL + + +++ E A KL ELEP N+ YV L
Sbjct: 574 AGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLL 633
Query: 449 SNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
+N+YA +GRW D+EKVR MM++ L K G S++E+
Sbjct: 634 ANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSN 672
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 143/276 (51%), Gaps = 6/276 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTI--LPNHYTFPFLFKSLSAPC 150
+P+ + +N +IR + +H+++ S+F M + +P+ YT+PF+ K+
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAI---SVFIRMVSEGVKCVPDGYTYPFVAKAAGELK 131
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
VH +L+ D YV N+LL +Y ++ + R +FD M +RDV+SW MI
Sbjct: 132 SMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV-EMARDVFDVMKNRDVISWNTMI 190
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G+ G +DAL+ F+ M V + T+V+ L C +EMG +H +
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG 250
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
+ + AL++MY KCGR++E VF ++ ++V TW +I G E A+ L M
Sbjct: 251 DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLM 310
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
+ +GVR + VT+ +++S C + V+ G+ + G+ V
Sbjct: 311 QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV 346
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 160/329 (48%), Gaps = 9/329 (2%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V +N++I + + + +++L +F M ++ +H T + ++
Sbjct: 183 VISWNTMISGYYRNGYMNDALM---MFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VH V + I V N+L+ +Y R+ R +FD M RDV++WT MI G+ G
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRM-DEARFVFDRMERRDVITWTCMINGYTEDG 298
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
++AL MQ+ GV PN VT+ + ++ C D+ V G +H + R D+++ T
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIET 358
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
+LI MYAKC RV+ RVFS + + W+A+I G + +A+ LF RM ++ V
Sbjct: 359 SLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEP 418
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
+ TL ++L A ++ L D+ + + K GF+ ++ +V + ++ G+L A +
Sbjct: 419 NIATLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHK 476
Query: 398 VMRCMP---FDPTKAMWGSLLVSSKSQGD 423
+ + +WG+L+ GD
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 141/298 (47%), Gaps = 7/298 (2%)
Query: 130 NTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFS 189
N L + + L +A ++ +++H HV+ G + ++ ++L YA + +
Sbjct: 9 NNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHI-T 66
Query: 190 LCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGV--APNRVTMVNALAA 247
R+LF+EM ++S+ ++I + G + DA+ F +M GV P+ T A
Sbjct: 67 YARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKA 126
Query: 248 CADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTW 307
+ ++++G +H I R+ + D + AL+ MY G+VE VF +K ++V +W
Sbjct: 127 AGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISW 186
Query: 308 NAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVE 367
N +I G +A+ +F+ M + V D T++++L C H ++MGR + + E
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEE 246
Query: 368 GKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
+ G VK+ +V++ + G + EA V M W ++ GD+E
Sbjct: 247 KRLGDKIEVKN--ALVNMYLKCGRMDEARFVFDRMERRDV-ITWTCMINGYTEDGDVE 301
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 209/400 (52%), Gaps = 14/400 (3%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P+ +V + SLI F +++ +++ F M N + N L +
Sbjct: 168 IPQWNVVAWGSLISGFVNNNRFSDAIEA---FREMQSNGVKANETIMVDLLVACGRCKDI 224
Query: 153 AQAQSVHAHVLKLGH--------LHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVV 204
+ H + LG ++ + SL+ +YA L + R LFD M R +V
Sbjct: 225 VTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRT-ARYLFDGMPERTLV 283
Query: 205 SWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFI 264
SW +I G+ G ++AL F M G+AP++VT ++ + A G ++G IH ++
Sbjct: 284 SWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYV 343
Query: 265 RRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAI 324
+ G+ D + AL++MYAK G E + F +++K+ W VI GLA G EA+
Sbjct: 344 SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEAL 403
Query: 325 RLFNRMEQDG-VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMV 383
+F RM++ G D +T L VL AC+H GLV+ G++ F + + +G P V+HY CMV
Sbjct: 404 SIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRD-LHGLEPTVEHYGCMV 462
Query: 384 DLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSA 443
D+L+R+G EA +++ MP P +WG+LL +LE ++ + + E E S
Sbjct: 463 DILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSG 522
Query: 444 YYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
YV LSN+YA+ GRW DV+ +R MK +++ K LG SSVE
Sbjct: 523 IYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 199/420 (47%), Gaps = 17/420 (4%)
Query: 44 CHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQS--HXXXXXXXXXXXXXVPRPHVFIF 101
C S + + Q+ +I ++ N I C + + P V+I+
Sbjct: 16 CRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIW 75
Query: 102 NSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAH 161
NS+IR +S+S + +L + M R P+++TFP++ K+ S VH
Sbjct: 76 NSMIRGYSNSPNPDKALI---FYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGF 132
Query: 162 VLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDD 221
V+K G ++YV LL +Y + + ++F+++ +VV+W +I GF N +F D
Sbjct: 133 VVKTGFEVNMYVSTCLLHMYMCCGEV-NYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSD 191
Query: 222 ALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE--------LDV 273
A+ AF +MQ GV N MV+ L AC + G W H F++ G++ +V
Sbjct: 192 AIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNV 251
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
+L T+LIDMYAKCG + +F + E+ + +WN++I G + EEA+ +F M
Sbjct: 252 ILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL 311
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
G+ D+VT L+V+ A G +G+ I ++ K GF+ + +V++ A++G
Sbjct: 312 GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYV--SKTGFVKDAAIVCALVNMYAKTGDAE 369
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYA 453
A + + T A W +++ S G + + +++ E A +L LYA
Sbjct: 370 SAKKAFEDLEKKDTIA-WTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYA 428
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 217/413 (52%), Gaps = 35/413 (8%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V ++NS+I + ++ +L +F M RN + T + + +
Sbjct: 284 VILWNSMISGYIANNMKMEALV---LFNEM-RNETREDSRTLAAVINACIGLGFLETGKQ 339
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYA--ASP----RLFSL--------------------- 190
+H H K G + DI V ++LL +Y+ SP +LFS
Sbjct: 340 MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGR 399
Query: 191 ---CRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAA 247
+++F+ + ++ ++SW M GF G + L F QM + + V++ + ++A
Sbjct: 400 IDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISA 459
Query: 248 CADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTW 307
CA ++E+G + G + D V+ ++LID+Y KCG VE G RVF ++ + + W
Sbjct: 460 CASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPW 519
Query: 308 NAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVE 367
N++I G A G EAI LF +M G+R ++T + VL+ACN+ GLV+ GR++F + +
Sbjct: 520 NSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESM-K 578
Query: 368 GKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS 427
+GF+P+ +H++CMVDLLAR+G + EA ++ MPFD +MW S+L + G
Sbjct: 579 VDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMG 638
Query: 428 EFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCS 480
+ A K++ELEP NS YV LS ++A G W+ VR +M++ +TK+ G S
Sbjct: 639 KKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 38/258 (14%)
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
D Y N ++ +A + L S+ R+LF+ M +DVV+ ++ G+ G ++AL F++
Sbjct: 122 RDGYSWNVVVSGFAKAGEL-SVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE 180
Query: 229 MQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAK--- 285
+ ++ A +T+ L ACA+ A++ G IH I G E D + ++L+++YAK
Sbjct: 181 LNFSADA---ITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD 237
Query: 286 ----------------------------CGRVEEGVRVFSSVKEKNVFTWNAVIKGLALA 317
CGRV E +F + V WN++I G
Sbjct: 238 LRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIAN 297
Query: 318 KSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVK 377
EA+ LFN M + R D TL AV++AC G ++ G+Q+ K+G I ++
Sbjct: 298 NMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHAC--KFGLIDDIV 354
Query: 378 HYACMVDLLARSGSLREA 395
+ ++D+ ++ GS EA
Sbjct: 355 VASTLLDMYSKCGSPMEA 372
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 139/332 (41%), Gaps = 68/332 (20%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V NSL+ + + + +L +F ++ + T + K+ +
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEAL---RLFKELN---FSADAITLTTVLKACAELEAL 203
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL------------------------F 188
+ +HA +L G D +++SL+ VYA L +
Sbjct: 204 KCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGY 263
Query: 189 SLC------RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
+ C R LFD ++R V+ W MI G+ +AL+ F +M+ +R T+
Sbjct: 264 ANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSR-TLA 322
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAK----------------- 285
+ AC G +E G +H + G D+V+ + L+DMY+K
Sbjct: 323 AVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESY 382
Query: 286 --------------CGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
CGR+++ RVF ++ K++ +WN++ G + E + F++M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFG 363
+ + DEV+L +V+SAC +++G Q+F
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFA 474
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 116/255 (45%), Gaps = 46/255 (18%)
Query: 142 LFKSLSAPCHFAQAQSVHAHVLKLGHLHDI-YVHNSLLGVYAASPRLFSLCRQLFDEMTH 200
L +S S+ + + +LK G L I V N LL +Y+ S ++ + R LFDEM
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKM-GIARNLFDEMPD 90
Query: 201 RDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWI 260
R+ SW MI G+ N+G+ +L F+ M
Sbjct: 91 RNYFSWNTMIEGYMNSGEKGTSLRFFDMMP------------------------------ 120
Query: 261 HDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSG 320
R+G+ +VV + +AK G + R+F+++ EK+V T N+++ G L
Sbjct: 121 ----ERDGYSWNVV-----VSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYA 171
Query: 321 EEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA 380
EEA+RLF + AD +TL VL AC + G+QI ++ G G + K +
Sbjct: 172 EEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIG--GVECDSKMNS 226
Query: 381 CMVDLLARSGSLREA 395
+V++ A+ G LR A
Sbjct: 227 SLVNVYAKCGDLRMA 241
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 201/323 (62%), Gaps = 10/323 (3%)
Query: 175 NSLLGVYAASPRL---FSLCRQLFDEMTH-----RDVVSWTVMIMGFRNAGKFDDALLAF 226
NSL+ + + +L SL +L +EM H +VV+WT +I G G+ DD+L F
Sbjct: 364 NSLITSFVDAGKLDEALSLFSEL-EEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYF 422
Query: 227 EQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKC 286
QMQ++ V N VT+ L+ CA+ A+ +G IH + R ++++ AL++MYAKC
Sbjct: 423 RQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKC 482
Query: 287 GRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVL 346
G + EG VF ++++K++ +WN++IKG + E+A+ +F+RM G D + L+AVL
Sbjct: 483 GLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVL 542
Query: 347 SACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDP 406
SAC+H+GLV+ GR+IF + + ++G P +HYAC+VDLL R G L+EA E+++ MP +P
Sbjct: 543 SACSHAGLVEKGREIF-YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEP 601
Query: 407 TKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRG 466
+ G+LL S + +++ +E +A +L LEP + Y+ LSN+Y+ GRW++ VR
Sbjct: 602 KVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRA 661
Query: 467 MMKDRQLTKDLGCSSVEVEEQGH 489
+ K + L K G S +EV+++ +
Sbjct: 662 LAKKKDLKKVSGSSWIEVKKKKY 684
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 165/394 (41%), Gaps = 89/394 (22%)
Query: 100 IFNSLIRA-FSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
++NS+++A SH + + L ++ M + + + Y P + ++ F ++
Sbjct: 125 LWNSILKANVSHGLYEN----ALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAF 180
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN--- 215
H V+++G +++V N LL +Y + R+ LF EM R+ +SW VMI GF
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLYPKAGRMGD-AYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 216 --------------------------------AGKFDDALLAFEQMQYAGVAPNRVTMVN 243
GKF+D L F M+ +G A + +
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV 299
Query: 244 ALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK- 302
+ CA+ A+ + +H ++ + G+E + ALI +Y K G+V++ +F ++ K
Sbjct: 300 FFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 303 --------------------------------------NVFTWNAVIKGLALAKSGEEAI 324
NV TW +VIKG + G++++
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD 384
F +M+ V A+ VT+ +LS C +++GR+I G ++ + N+ +V+
Sbjct: 420 EYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVI--RTSMSENILVQNALVN 477
Query: 385 LLARSGSLREA---FEVMRCMPFDPTKAMWGSLL 415
+ A+ G L E FE +R D W S++
Sbjct: 478 MYAKCGLLSEGSLVFEAIR----DKDLISWNSII 507
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+ +V + S+I+ + +SL F M + +L N T + +
Sbjct: 396 KANVVTWTSVIKGCNVQGRGDDSL---EYFRQMQFSKVLANSVTICCILSICAELPALNL 452
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+ +H HV++ +I V N+L+ +YA L S +F+ + +D++SW +I G+
Sbjct: 453 GREIHGHVIRTSMSENILVQNALVNMYAKCG-LLSEGSLVFEAIRDKDLISWNSIIKGYG 511
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWI-HDFIRRNGWELDV 273
G + AL F++M +G P+ + +V L+AC+ +G VE G I + +R G E
Sbjct: 512 MHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQ 571
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSV 299
++D+ + G ++E + ++
Sbjct: 572 EHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 147/353 (41%), Gaps = 59/353 (16%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHN-----SLLGVYAASPRLFSLCRQLFDEMTH---RDVVS 205
Q + VHA VL L D + +L+ VYA L R +F+ ++ D+
Sbjct: 71 QCRQVHAQVL----LSDFIFRSGSLAANLISVYARLGLLLD-ARNVFETVSLVLLSDLRL 125
Query: 206 WTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIR 265
W ++ + G +++AL + M+ G+ + + L AC G + H +
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 266 RNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIR 325
+ G + ++ + L+ +Y K GR+ + +F + +N +WN +IKG + E A++
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 326 LFNRMEQDGVRADEVTLLAVL-----------------------------------SACN 350
+F M+++ + DEVT +VL S C
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 351 HSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAM 410
+ + ++ G++++G GF + ++ + + G +++A + R + ++
Sbjct: 306 ELEALSIAEKVHGYVIKG--GFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIES- 362
Query: 411 WGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEK 463
W SL+ S G L+ + + ELE N H+ N+ A + W V K
Sbjct: 363 WNSLITSFVDAGKLDEALSL---FSELEEMN-----HVCNVKANVVTWTSVIK 407
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 205/397 (51%), Gaps = 4/397 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P +V + ++I + S L +F +M R I F + + + F
Sbjct: 185 MPGKNVISWTTMICGLDQNER---SGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAF 241
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
VH ++KLG L++ YV SL+ YA R+ R++FDE H V WT ++ G
Sbjct: 242 HMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGD-SRKVFDEKVHEQVAVWTALLSG 300
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ K +DAL F M + PN+ T + L +C+ G ++ G +H + G E D
Sbjct: 301 YSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETD 360
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+G +L+ MY+ G V + V VF + +K++ +WN++I G A G+ A +F +M +
Sbjct: 361 AFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
DE+T +LSAC+H G ++ GR++F ++ G ++HY CMVD+L R G L
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKL 480
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
+EA E++ M P + +W +LL + + D++ E A + L+ +SA YV LSN+Y
Sbjct: 481 KEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
A GRW +V K+R MK + K G S V + + H
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKH 577
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 123/249 (49%), Gaps = 5/249 (2%)
Query: 193 QLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSG 252
+LF +M ++V+SWT MI G + +AL F+ M + + ACA++
Sbjct: 180 KLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAP 239
Query: 253 AVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIK 312
A MG +H I + G+ + + +LI YA C R+ + +VF + V W A++
Sbjct: 240 AFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLS 299
Query: 313 GLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGF 372
G +L K E+A+ +F+ M ++ + ++ T + L++C+ G +D G+++ G V K G
Sbjct: 300 GYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAV--KLGL 357
Query: 373 IPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVAR 432
+ +V + + SG++ +A V F + W S++V G +++ +
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVF-IKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 433 KLVEL--EP 439
+++ L EP
Sbjct: 417 QMIRLNKEP 425
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 171 IYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQ 230
+ ++ ++ Y S RL LFDEM RDVVSW MI G G + A+ F++M
Sbjct: 66 VSLYTKMITGYTRSNRLVDAL-NLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 231 YAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL---DVVLGTALIDMYAKCG 287
V + MVN C SG V D R +++ D +++ Y + G
Sbjct: 125 ERSVV-SWTAMVNG---CFRSGKV-------DQAERLFYQMPVKDTAAWNSMVHGYLQFG 173
Query: 288 RVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLS 347
+V++ +++F + KNV +W +I GL + EA+ LF M + +++ V++
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVIT 233
Query: 348 ACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA---RSGSLREAFE 397
AC ++ MG Q+ G ++ K GF+ A ++ A R G R+ F+
Sbjct: 234 ACANAPAFHMGIQVHGLII--KLGFLYEEYVSASLITFYANCKRIGDSRKVFD 284
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 219/391 (56%), Gaps = 5/391 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P+ V ++ +I F + + ++ +F M ++PN +T + +
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAV---DLFIRMREAFVVPNEFTLSSILNGCAIGKCS 364
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H V+K+G DIYV N+L+ VYA ++ + + LF E++ ++ VSW +I+G
Sbjct: 365 GLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVK-LFAELSSKNEVSWNTVIVG 423
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ N G+ A F + V+ VT +AL ACA ++++G +H +
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
V + +LIDMYAKCG ++ VF+ ++ +V +WNA+I G + G +A+R+ + M+
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
+ + +T L VLS C+++GL+D G++ F ++ +G P ++HY CMV LL RSG L
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR-DHGIEPCLEHYTCMVRLLGRSGQL 602
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
+A +++ +P++P+ +W ++L +S +Q + EF+ A +++++ P + A YV +SN+Y
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMY 662
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
A +W +V +R MK+ + K+ G S +E
Sbjct: 663 AGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 159/328 (48%), Gaps = 13/328 (3%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
+ ++ ++ + + + +SL LS M +PN+YTF K+ F A+
Sbjct: 212 IVVWAGIVSCYVENGYFEDSLKLLSC---MRMAGFMPNNYTFDTALKASIGLGAFDFAKG 268
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VH +LK ++ D V LL +Y + S ++F+EM DVV W+ MI F G
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDM-SDAFKVFNEMPKNDVVPWSFMIARFCQNG 327
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
++A+ F +M+ A V PN T+ + L CA +G +H + + G++LD+ +
Sbjct: 328 FCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN 387
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
ALID+YAKC +++ V++F+ + KN +WN VI G G +A +F ++ V
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSV 447
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC---MVDLLARSGSLRE 394
EVT + L AC +D+G Q+ G ++ N K A ++D+ A+ G ++
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTN-----NAKKVAVSNSLIDMYAKCGDIKF 502
Query: 395 AFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
A V M A W +L+ + G
Sbjct: 503 AQSVFNEMETIDV-ASWNALISGYSTHG 529
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 144/304 (47%), Gaps = 4/304 (1%)
Query: 120 PLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLG 179
P+ +++ +HR N + F K + +H+ ++KLG+ + +V +L+
Sbjct: 130 PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALIN 189
Query: 180 VYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRV 239
Y+ + S R +F+ + +D+V W ++ + G F+D+L M+ AG PN
Sbjct: 190 AYSVCGSVDS-ARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNY 248
Query: 240 TMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV 299
T AL A GA + +H I + + LD +G L+ +Y + G + + +VF+ +
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308
Query: 300 KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGR 359
+ +V W+ +I EA+ LF RM + V +E TL ++L+ C +G
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368
Query: 360 QIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSK 419
Q+ G +V K GF ++ ++D+ A+ + A ++ + + W +++V +
Sbjct: 369 QLHGLVV--KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTVIVGYE 425
Query: 420 SQGD 423
+ G+
Sbjct: 426 NLGE 429
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 7/249 (2%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
A+++H +LK G D++ N LL Y + LFDEM R+ VS+ + G+
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAG-FDKDALNLFDEMPERNNVSFVTLAQGY- 125
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
D + + ++ G N + L E+ W+H I + G++ +
Sbjct: 126 ---ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+G ALI+ Y+ CG V+ VF + K++ W ++ E++++L + M G
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
+ T L A G D + + G +++ Y P V ++ L + G + +
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSD 300
Query: 395 AFEVMRCMP 403
AF+V MP
Sbjct: 301 AFKVFNEMP 309
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 212/394 (53%), Gaps = 5/394 (1%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
+V +NS+I A+ + N + IF M + P + + + + +
Sbjct: 301 NVVSWNSMIDAYVQ---NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
+H ++LG ++ V NSL+ +Y + +F ++ R +VSW MI+GF
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEV-DTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
G+ DAL F QM+ V P+ T V+ + A A+ WIH + R+ + +V +
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 476
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
TAL+DMYAKCG + +F + E++V TWNA+I G G+ A+ LF M++ ++
Sbjct: 477 TALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 536
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
+ VT L+V+SAC+HSGLV+ G + F ++++ Y ++ HY MVDLL R+G L EA+
Sbjct: 537 PNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMG 456
+ + MP P ++G++L + + ++ F+E A +L EL P + Y+V L+N+Y
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAAS 655
Query: 457 RWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
W+ V +VR M + L K GCS VE++ + H+
Sbjct: 656 MWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHS 689
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 15/294 (5%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L F M + + P Y F +L K + +H ++K G D++ L +
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
YA R + R++FD M RD+VSW ++ G+ G AL + M + P+ +T
Sbjct: 180 YAKC-RQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
+V+ L A + + +G IH + R+G++ V + TAL+DMYAKCG +E ++F +
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
E+NV +WN++I ++ +EA+ +F +M +GV+ +V+++ L AC G ++ GR
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSL 414
I VE G NV ++ + +C D +M+G L
Sbjct: 359 IHKLSVE--LGLDRNVSVVNSLISMYC------------KCKEVDTAASMFGKL 398
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 136/290 (46%), Gaps = 9/290 (3%)
Query: 128 HRNTILPNHYTFP--FLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASP 185
RN I N Y P L + S+ + + + V K G + + L+ ++
Sbjct: 27 ERNYIPANVYEHPAALLLERCSS---LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYG 83
Query: 186 RLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNAL 245
+ R +F+ + + V + M+ GF D AL F +M+Y V P L
Sbjct: 84 SVDEAAR-VFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLL 142
Query: 246 AACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVF 305
C D + +G IH + ++G+ LD+ T L +MYAKC +V E +VF + E+++
Sbjct: 143 KVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLV 202
Query: 306 TWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFL 365
+WN ++ G + A+ + M ++ ++ +T+++VL A + L+ +G++I G+
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 366 VEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLL 415
+ + + N+ +VD+ A+ GSL A ++ M + W S++
Sbjct: 263 MRSGFDSLVNIS--TALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMI 309
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/426 (30%), Positives = 216/426 (50%), Gaps = 38/426 (8%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTIL-PNHYTFPFLFKSLSAPCHFAQAQ 156
+ +NS+I F+ + L L IF+ M R+++L P+ +T + + + +
Sbjct: 243 IVTWNSMISGFNQRGY---DLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYA------ASPRLF---------------------- 188
+H+H++ G V N+L+ +Y+ + RL
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 189 ----SLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNA 244
+ + +F + RDVV+WT MI+G+ G + +A+ F M G PN T+
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 245 LAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK-EKN 303
L+ + ++ G IH ++G V + ALI MYAK G + R F ++ E++
Sbjct: 420 LSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD 479
Query: 304 VFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFG 363
+W ++I LA EEA+ LF M +G+R D +T + V SAC H+GLV+ GRQ F
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 364 FLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGD 423
+ + IP + HYACMVDL R+G L+EA E + MP +P WGSLL + + +
Sbjct: 540 MMKDVD-KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 598
Query: 424 LEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
++ + A +L+ LEP NS Y L+NLY+ G+W++ K+R MKD ++ K+ G S +E
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658
Query: 484 VEEQGH 489
V+ + H
Sbjct: 659 VKHKVH 664
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 188/447 (42%), Gaps = 78/447 (17%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P+ + ++I + + +H ++ + M + I P +T + S++A
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAI---RVMGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ VH+ ++KLG ++ V NSLL +YA + + +FD M RD+ SW MI
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM-MAKFVFDRMVVRDISSWNAMIAL 221
Query: 213 FRNAGKFDDALLAFEQMQYAGV--------------------------------APNRVT 240
G+ D A+ FEQM + +P+R T
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELD-VVLG----------------------- 276
+ + L+ACA+ + +G IH I G+++ +VL
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 277 ---------TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLF 327
TAL+D Y K G + + +F S+K+++V W A+I G S EAI LF
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA 387
M G R + TL A+LS + + G+QI G V K G I +V ++ + A
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV--KSGEIYSVSVSNALITMYA 459
Query: 388 RSGSL---REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS-EFVARKLVELEPANSA 443
++G++ AF+++RC + W S++++ G E + E L+E +
Sbjct: 460 KAGNITSASRAFDLIRC---ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Query: 444 YYVHLSNLYAEMGRWDDVEKVRGMMKD 470
YV + + G + + MMKD
Sbjct: 517 TYVGVFSACTHAGLVNQGRQYFDMMKD 543
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 146/321 (45%), Gaps = 72/321 (22%)
Query: 141 FLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASP------RLF------ 188
L KS++ AQ VH V+K G + +Y+ N+L+ VY+ + +LF
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 189 -------------------SLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM 229
S C + FD++ RD VSWT MI+G++N G++ A+ M
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTC-EFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137
Query: 230 QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKC--- 286
G+ P + T+ N LA+ A + +E G +H FI + G +V + +L++MYAKC
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 287 ----------------------------GRVEEGVRVFSSVKEKNVFTWNAVIKGLALAK 318
G+++ + F + E+++ TWN++I G
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257
Query: 319 SGEEAIRLFNRMEQDGVRA-DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKY---GFIP 374
A+ +F++M +D + + D TL +VLSAC + + +G+QI +V + G +
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317
Query: 375 NVKHYACMVDLLARSGSLREA 395
N ++ + +R G + A
Sbjct: 318 N-----ALISMYSRCGGVETA 333
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 211/393 (53%), Gaps = 11/393 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNT-ILPNHYTFPFLFKSLSAPCH 151
+P P V + +++ AFS + + +L +F MHR ++P+ TF + +
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEAL---GLFYAMHRGKGLVPDGSTFGTVLTACGNLRR 280
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
Q + +H ++ G ++ V +SLL +Y + RQ+F+ M+ ++ VSW+ ++
Sbjct: 281 LKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVRE-ARQVFNGMSKKNSVSWSALLG 339
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G+ G+ + A+ F +M+ + L ACA AV +G IH R G
Sbjct: 340 GYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 395
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+V++ +ALID+Y K G ++ RV+S + +N+ TWNA++ LA GEEA+ FN M
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ G++ D ++ +A+L+AC H+G+VD GR F L+ YG P +HY+CM+DLL R+G
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYF-VLMAKSYGIKPGTEHYSCMIDLLGRAGL 514
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDL-EFSEFVARKLVELEPANSAYYVHLSN 450
EA ++ ++WG LL + D +E +A++++ELEP YV LSN
Sbjct: 515 FEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSN 574
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
+Y +GR D +R +M R + K +G S ++
Sbjct: 575 MYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 142/302 (47%), Gaps = 8/302 (2%)
Query: 140 PFLFKSLSAPCH----FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLF 195
P L+ SL C+ F HAHV+K G D V NSLL +Y R++F
Sbjct: 61 PKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVF 120
Query: 196 DEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVE 255
D +D +SWT M+ G+ + AL F +M G+ N T+ +A+ AC++ G V
Sbjct: 121 DGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVR 180
Query: 256 MGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLA 315
+G H + +G+E + + + L +Y + RVF + E +V W AV+ +
Sbjct: 181 LGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFS 240
Query: 316 LAKSGEEAIRLFNRMEQ-DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIP 374
EEA+ LF M + G+ D T VL+AC + + G++I G L+ G
Sbjct: 241 KNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIG--S 298
Query: 375 NVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKL 434
NV + ++D+ + GS+REA +V M W +LL G+ E + + R++
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
Query: 435 VE 436
E
Sbjct: 358 EE 359
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 224/465 (48%), Gaps = 75/465 (16%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P + +NSL+ ++ +++ ++ M + P+ + L ++++ P H
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAI---AVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+++H ++L+ +D+YV +L+ +Y + L R +FD M +++V+W ++ G
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL-PYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 215 NA-----------------------------------GKFDDALLAFEQMQYAGVAPNRV 239
A GK + AL +M+ GVAPN V
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 240 TMVNALAACADSG--------------------AVEM---------------GAWIHDFI 264
+ + C+ +G A M G +H F
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 265 RRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAI 324
R D + TAL+DMY K G ++ + +F +K K++ +WN ++ G A+ GEE I
Sbjct: 423 LRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGI 482
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD 384
F+ M + G+ D +T +VLS C +SGLV G + F L+ +YG IP ++H +CMVD
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFD-LMRSRYGIIPTIEHCSCMVD 541
Query: 385 LLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAY 444
LL RSG L EA++ ++ M P +WG+ L S K DLE +E ++L LEP NSA
Sbjct: 542 LLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSAN 601
Query: 445 YVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
Y+ + NLY+ + RW+DVE++R +M++ ++ S +++++ H
Sbjct: 602 YMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVH 646
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 166/361 (45%), Gaps = 44/361 (12%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P+ +N ++ S + ++ +F M + T L + S F
Sbjct: 49 MPKRDDLAWNEIVMVNLRSGNWEKAV---ELFREMQFSGAKAYDSTMVKLLQVCSNKEGF 105
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----------- 201
A+ + +H +VL+LG ++ + NSL+ +Y+ + +L L R++F+ M R
Sbjct: 106 AEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKL-ELSRKVFNSMKDRNLSSWNSILSS 164
Query: 202 ------------------------DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
D+V+W ++ G+ + G DA+ ++MQ AG+ P+
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS 297
++ + L A A+ G +++G IH +I RN DV + T LIDMY K G + VF
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284
Query: 298 SVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDM 357
+ KN+ WN+++ GL+ A ++A L RME++G++ D +T ++ S G +
Sbjct: 285 MMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 358 GRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV---MRCMPFDPTKAMWGSL 414
+ G + E G PNV + + +++G+ R A +V M+ P A +L
Sbjct: 345 ALDVIGKMKEK--GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTL 402
Query: 415 L 415
L
Sbjct: 403 L 403
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 168/369 (45%), Gaps = 49/369 (13%)
Query: 157 SVHAHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
++H ++K G D V ++ +G Y L +LFDEM RD ++W ++M
Sbjct: 8 TIHGGLIKRGLDNSDTRVVSASMGFYGRCVSL-GFANKLFDEMPKRDDLAWNEIVMVNLR 66
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
+G ++ A+ F +MQ++G TMV L C++ G IH ++ R G E +V +
Sbjct: 67 SGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSM 126
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKN-------------------------------- 303
+LI MY++ G++E +VF+S+K++N
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 304 ---VFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
+ TWN+++ G A ++AI + RM+ G++ ++ ++L A G + +G+
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKS 420
I G+++ + + +V ++D+ ++G L A V M A W SL+
Sbjct: 247 IHGYILRNQLWY--DVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVA-WNSLVSGLSY 303
Query: 421 QGDLEFSE-FVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDL-- 477
L+ +E + R E ++ + L++ YA +G+ + V G MK++ + ++
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 478 ------GCS 480
GCS
Sbjct: 364 WTAIFSGCS 372
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 256 MGAWIHD-FIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGL 314
+G IH I+R D + +A + Y +C + ++F + +++ WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 315 ALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIP 374
+ + E+A+ LF M+ G +A + T++ +L C++ GRQI G+++ + G
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVL--RLGLES 122
Query: 375 NVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
NV ++ + +R+G L + +V M D + W S+L S G
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLG 169
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 206/370 (55%), Gaps = 3/370 (0%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
LS+F MH P+ YT +F + + Q +H + +K G D+ V++SL +
Sbjct: 76 LSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHM 135
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
Y + +L + M R++V+W +IMG G + L ++ M+ +G PN++T
Sbjct: 136 YMRNGKLQD-GEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 194
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
V L++C+D G IH + G V + ++LI MY+KCG + + + FS +
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 254
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRM-EQDGVRADEVTLLAVLSACNHSGLVDMGR 359
+++ W+++I G+EAI LFN M EQ + +EV L +L AC+HSGL D G
Sbjct: 255 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 314
Query: 360 QIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSK 419
++F +VE KYGF P +KHY C+VDLL R+G L +A ++R MP +W +LL +
Sbjct: 315 ELFDMMVE-KYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACN 373
Query: 420 SQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGC 479
+ E ++ V +++++++P +SA YV L+N++A RW DV +VR M+D+ + K+ G
Sbjct: 374 IHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGI 433
Query: 480 SSVEVEEQGH 489
S E + + H
Sbjct: 434 SWFEHKGEVH 443
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
F A +V+ + K ++ N L+ Y + L + R++FDEM R + +W MI
Sbjct: 10 FPSAVAVYGRMRKKNYMSS----NILINGYVRAGDLVN-ARKVFDEMPDRKLTTWNAMIA 64
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G ++ L F +M G +P+ T+ + + A +V +G IH + + G EL
Sbjct: 65 GLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL 124
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
D+V+ ++L MY + G++++G V S+ +N+ WN +I G A E + L+ M+
Sbjct: 125 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 184
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
G R +++T + VLS+C+ + G+QI + K G V + ++ + ++ G
Sbjct: 185 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI--KIGASSVVAVVSSLISMYSKCGC 242
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSK--SQGD 423
L +A + D + MW S++ + QGD
Sbjct: 243 LGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGD 275
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 16/289 (5%)
Query: 51 QQIQAQLILHNLQ----SNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIR 106
QQI I + L+ N ++AH ++ +P ++ +N+LI
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYM-----RNGKLQDGEIVIRSMPVRNLVAWNTLIM 165
Query: 107 AFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLG 166
+ + T L ++ M + PN TF + S S Q Q +HA +K+G
Sbjct: 166 GNAQNGCPE---TVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG 222
Query: 167 HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAF 226
+ V +SL+ +Y+ L + F E D V W+ MI + G+ D+A+ F
Sbjct: 223 ASSVVAVVSSLISMYSKCGCLGDAAKA-FSEREDEDEVMWSSMISAYGFHGQGDEAIELF 281
Query: 227 EQM-QYAGVAPNRVTMVNALAACADSGAVEMGAWIHD-FIRRNGWELDVVLGTALIDMYA 284
M + + N V +N L AC+ SG + G + D + + G++ + T ++D+
Sbjct: 282 NTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLG 341
Query: 285 KCGRVEEGVRVFSSVKEK-NVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ G +++ + S+ K ++ W ++ + K+ E A R+F + Q
Sbjct: 342 RAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 205/371 (55%), Gaps = 14/371 (3%)
Query: 120 PLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLG 179
L +F M ++ ++ N T ++S + A+S H +K+G D+++ +L+G
Sbjct: 211 ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIG 270
Query: 180 VYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRV 239
+Y + + S R++FD +DVV+W MI + G ++ + QM+Y + PN
Sbjct: 271 MYGKTGGISS-ARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSS 329
Query: 240 TMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV 299
T V L++CA S A +G + D + LD +LGTAL+DMYAK G +E+ V +F+ +
Sbjct: 330 TFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRM 389
Query: 300 KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG--VRADEVTLLAVLSACNHSGLVDM 357
K+K+V +W A+I G EA+ LFN+ME++ VR +E+T L VL+AC+H GLV
Sbjct: 390 KDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVME 449
Query: 358 GRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVS 417
G + F +VE Y F P V+HY C+VDLL R+G L EA+E++R +P W +LL +
Sbjct: 450 GIRCFKRMVEA-YSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAA 508
Query: 418 SKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWD---DVEKVRGMMKDRQLT 474
+ G+ + E V +L E+ + A + L+ +A G + D E +G
Sbjct: 509 CRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLDNELNKG-------R 561
Query: 475 KDLGCSSVEVE 485
K+ G S++E+E
Sbjct: 562 KEAGYSAIEIE 572
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 158/331 (47%), Gaps = 8/331 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
V ++F+FN++IR +S S + S+F + + + ++F KS S
Sbjct: 85 VSNTNLFMFNTMIRGYSISDEPERAF---SVFNQLRAKGLTLDRFSFITTLKSCSRELCV 141
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR-DVVSWTVMIM 211
+ + +H L+ G + + N+L+ Y ++ S R++FDEM D V+++ ++
Sbjct: 142 SIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKI-SDARKVFDEMPQSVDAVTFSTLMN 200
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G+ K AL F M+ + V N T+++ L+A +D G + H + G +L
Sbjct: 201 GYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL 260
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
D+ L TALI MY K G + R+F K+V TWN +I A EE + L +M+
Sbjct: 261 DLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMK 320
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ ++ + T + +LS+C +S +GR + L E + + +VD+ A+ G
Sbjct: 321 YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIAL--DAILGTALVDMYAKVGL 378
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
L +A E+ M K+ W +++ + G
Sbjct: 379 LEKAVEIFNRMKDKDVKS-WTAMISGYGAHG 408
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 156/355 (43%), Gaps = 38/355 (10%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+ +H +++K G D + + LL + ++ +F+ +++ ++ + MI G+
Sbjct: 43 EVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYA--SSIFEHVSNTNLFMFNTMIRGY 100
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
+ + + A F Q++ G+ +R + + L +C+ V +G +H R+G+ +
Sbjct: 101 SISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFT 160
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEK-NVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
L ALI Y CG++ + +VF + + + T++ ++ G A+ LF M +
Sbjct: 161 DLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRK 220
Query: 333 DGVRADEVTLLAVLSA----------------CNHSGLVDMGRQIFGFLVE--GKYGFIP 374
V + TLL+ LSA C GL D+ + L+ GK G I
Sbjct: 221 SEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGL-DLDLHLITALIGMYGKTGGIS 279
Query: 375 NVKH------------YACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSL--LVSSKS 420
+ + + CM+D A++G L E ++R M ++ K + L+SS +
Sbjct: 280 SARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCA 339
Query: 421 QGDLEFSEFVARKLVELE--PANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQL 473
+ F L+E E ++ L ++YA++G + ++ MKD+ +
Sbjct: 340 YSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDV 394
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 217/402 (53%), Gaps = 18/402 (4%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+PR + +NS+I+ + +S + + I M P+ T + + S +
Sbjct: 269 MPRKSLVAWNSMIKGYVA---KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVV-SWTVMIM 211
+ +H +V++ DIYV+ SL+ +Y +L +F + T +DV SW VMI
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA-NLAETVFSK-TQKDVAESWNVMIS 383
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ + G + A+ ++QM GV P+ VT + L AC+ A+E G IH I + E
Sbjct: 384 SYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLET 443
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
D +L +AL+DMY+KCG +E R+F+S+ +K+V +W +I EA+ F+ M+
Sbjct: 444 DELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQ 503
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ G++ D VTLLAVLSAC H+GL+D G + F + KYG P ++HY+CM+D+L R+G
Sbjct: 504 KFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM-RSKYGIEPIIEHYSCMIDILGRAGR 562
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSS------KSQGDLEFSEFVARKLVELEPANSAYY 445
L EA+E+++ P A S L S+ S GD +AR LVE P +++ Y
Sbjct: 563 LLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDR-----IARLLVENYPDDASTY 617
Query: 446 VHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
+ L NLYA WD +VR MK+ L K GCS +E+ ++
Sbjct: 618 MVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDK 659
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 175/332 (52%), Gaps = 12/332 (3%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTI-LPNHYTFPFLFKSLSAPCHFA 153
R V+I+NSL+ +S + H++L +F + +I +P+ +TFP + K+ A
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTL---EVFKRLLNCSICVPDSFTFPNVIKAYGALGREF 124
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+ +H V+K G++ D+ V +SL+G+YA LF Q+FDEM RDV SW +I F
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKF-NLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
+G+ + AL F +M+ +G PN V++ A++AC+ +E G IH + G+ELD
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
+ +AL+DMY KC +E VF + K++ WN++IKG + + + NRM +
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA--CMVDLLARSGS 391
G R + TL ++L AC+ S + G+ I G+++ + N Y ++DL + G
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS----VVNADIYVNCSLIDLYFKCGE 359
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGD 423
A V D ++ W ++ S S G+
Sbjct: 360 ANLAETVFSKTQKDVAES-WNVMISSYISVGN 390
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 149/311 (47%), Gaps = 6/311 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V +N++I F S +L +F M + PN + + S
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKAL---ELFGRMESSGFEPNSVSLTVAISACSRLLWL 224
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ + +H +K G D YV+++L+ +Y L + R++F +M + +V+W MI G
Sbjct: 225 ERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCL-EVAREVFQKMPRKSLVAWNSMIKG 283
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G + +M G P++ T+ + L AC+ S + G +IH ++ R+ D
Sbjct: 284 YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 343
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ + +LID+Y KCG VFS ++ +WN +I + +A+ ++++M
Sbjct: 344 IYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS 403
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
GV+ D VT +VL AC+ ++ G+QI + E + + + ++D+ ++ G+
Sbjct: 404 VGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR--LETDELLLSALLDMYSKCGNE 461
Query: 393 REAFEVMRCMP 403
+EAF + +P
Sbjct: 462 KEAFRIFNSIP 472
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 138/282 (48%), Gaps = 7/282 (2%)
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR-DVVSWTVMIMGFRNA 216
VH +L LG D+ + SL+ VY S R +F+ R DV W ++ G+
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCS-ARHVFENFDIRSDVYIWNSLMSGYSKN 84
Query: 217 GKFDDALLAFEQMQYAGV-APNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
F D L F+++ + P+ T N + A G +G IH + ++G+ DVV+
Sbjct: 85 SMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVV 144
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
++L+ MYAK E ++VF + E++V +WN VI + E+A+ LF RME G
Sbjct: 145 ASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGF 204
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+ V+L +SAC+ ++ G++I V K GF + + +VD+ + L A
Sbjct: 205 EPNSVSLTVAISACSRLLWLERGKEIHRKCV--KKGFELDEYVNSALVDMYGKCDCLEVA 262
Query: 396 FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS-EFVARKLVE 436
EV + MP A W S++ ++GD + E + R ++E
Sbjct: 263 REVFQKMPRKSLVA-WNSMIKGYVAKGDSKSCVEILNRMIIE 303
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 216/395 (54%), Gaps = 8/395 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
V ++ +NSLI ++H + L +F M I P+ +T +
Sbjct: 365 VSDRNIVAWNSLISLYAH---RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H HV++ + D +V NSL+ +Y+ S + S +F+++ HR VV+W M+ G
Sbjct: 422 PLGKQIHGHVIRT-DVSDEFVQNSLIDMYSKSGSVDS-ASTVFNQIKHRSVVTWNSMLCG 479
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
F G +A+ F+ M ++ + N VT + + AC+ G++E G W+H + +G + D
Sbjct: 480 FSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-D 538
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ TALIDMYAKCG + VF ++ +++ +W+++I + AI FN+M +
Sbjct: 539 LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 598
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
G + +EV + VLSAC HSG V+ G+ F + +G PN +H+AC +DLL+RSG L
Sbjct: 599 SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM--KSFGVSPNSEHFACFIDLLSRSGDL 656
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
+EA+ ++ MPF ++WGSL+ + ++ + + L ++ ++ YY LSN+Y
Sbjct: 657 KEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIY 716
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
AE G W++ ++R MK L K G S++E++++
Sbjct: 717 AEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQK 751
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 161/324 (49%), Gaps = 9/324 (2%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPC-HF 152
P P F++ LI+ H + ++ + T + + FP + ++ + H
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLD---AAIDLYHRLVSETTQISKFVFPSVLRACAGSREHL 117
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ VH ++K G D + SLL +Y + L S ++FD M RD+V+W+ ++
Sbjct: 118 SVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNL-SDAEKVFDGMPVRDLVAWSTLVSS 176
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
G+ AL F+ M GV P+ VTM++ + CA+ G + + +H I R ++LD
Sbjct: 177 CLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
L +L+ MY+KCG + R+F + +KN +W A+I + E+A+R F+ M +
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK 296
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA-CMVDLLARSGS 391
G+ + VTL +VLS+C GL+ G+ + GF V + PN + + +V+L A G
Sbjct: 297 SGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV--RRELDPNYESLSLALVELYAECGK 354
Query: 392 LREAFEVMRCMPFDPTKAMWGSLL 415
L + V+R + D W SL+
Sbjct: 355 LSDCETVLRVVS-DRNIVAWNSLI 377
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 160/313 (51%), Gaps = 18/313 (5%)
Query: 118 LTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSL 177
+ L +F M + + P+ T + + + A+SVH + + D + NSL
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 178 LGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDD-ALLAFEQMQYAGVAP 236
L +Y+ L S ++F+++ ++ VSWT MI + N G+F + AL +F +M +G+ P
Sbjct: 244 LTMYSKCGDLLS-SERIFEKIAKKNAVSWTAMISSY-NRGEFSEKALRSFSEMIKSGIEP 301
Query: 237 NRVTMVNALAACADSGAVEMGAWIHDF-IRRNGWELDV---VLGTALIDMYAKCGRVEEG 292
N VT+ + L++C G + G +H F +RR ELD L AL+++YA+CG++ +
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRR---ELDPNYESLSLALVELYAECGKLSDC 358
Query: 293 VRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHS 352
V V ++N+ WN++I A +A+ LF +M ++ D TL + +SAC ++
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 353 GLVDMGRQIFGFLVEGKYG--FIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAM 410
GLV +G+QI G ++ F+ N ++D+ ++SGS+ A V +
Sbjct: 419 GLVPLGKQIHGHVIRTDVSDEFVQN-----SLIDMYSKSGSVDSASTVFNQIKHRSV-VT 472
Query: 411 WGSLLVSSKSQGD 423
W S+L G+
Sbjct: 473 WNSMLCGFSQNGN 485
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 181/313 (57%), Gaps = 2/313 (0%)
Query: 175 NSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGV 234
++L+ Y S L + +QLF+ M ++VVSWT +I GF G ++ A+ + +M G+
Sbjct: 231 STLIKGYVDSGEL-NRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGL 289
Query: 235 APNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVR 294
PN T+ L+AC+ SGA+ G IH +I NG +LD +GTAL+DMYAKCG ++
Sbjct: 290 KPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAAT 349
Query: 295 VFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGL 354
VFS++ K++ +W A+I+G A+ +AI+ F +M G + DEV LAVL+AC +S
Sbjct: 350 VFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSE 409
Query: 355 VDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSL 414
VD+G F + Y P +KHY +VDLL R+G L EA E++ MP +P W +L
Sbjct: 410 VDLGLNFFDSM-RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Query: 415 LVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLT 474
+ K+ +E V++ L+EL+P Y+ L +A G DVEK R ++ R
Sbjct: 469 YRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKE 528
Query: 475 KDLGCSSVEVEEQ 487
+ LG S +E++ Q
Sbjct: 529 RSLGWSYIELDGQ 541
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P +V + +LI FS + + T +S + M + PN YT + + S
Sbjct: 253 MPEKNVVSWTTLINGFSQTGDYE---TAISTYFEMLEKGLKPNEYTIAAVLSACSKSGAL 309
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+H ++L G D + +L+ +YA L +F M H+D++SWT MI G
Sbjct: 310 GSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL-DCAATVFSNMNHKDILSWTAMIQG 368
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G+F A+ F QM Y+G P+ V + L AC +S V++G D +R LD
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMR-----LD 423
Query: 273 VVLGTAL------IDMYAKCGRVEEGVRVFSSVK-EKNVFTWNAVIKG 313
+ L +D+ + G++ E + ++ ++ TW A+ +
Sbjct: 424 YAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRA 471
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 116/264 (43%), Gaps = 27/264 (10%)
Query: 143 FKSLSAPCH-FAQAQSVHAHVLKLGHLH-----DIYVHNSLLGVYAASPRLFSLCRQLFD 196
F SL C A + VHA +L+ G L + +SLL SP +SL +F
Sbjct: 32 FISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLL----KSPD-YSL--SIFR 84
Query: 197 EMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEM 256
R+ +I G +F+ ++ F M GV P+R+T L + + G +
Sbjct: 85 NSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWL 144
Query: 257 GAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSS----VKEKNVFTWNAVIK 312
G +H +N + D + +L+DMYAK G+++ +VF +K++++ WN +I
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 313 GLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGF 372
G AK A LF M + + + ++ SG ++ +Q+F + E
Sbjct: 205 GYCRAKDMHMATTLFRSMPE----RNSGSWSTLIKGYVDSGELNRAKQLFELMPE----- 255
Query: 373 IPNVKHYACMVDLLARSGSLREAF 396
NV + +++ +++G A
Sbjct: 256 -KNVVSWTTLINGFSQTGDYETAI 278
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 20/246 (8%)
Query: 235 APNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRV----E 290
+P+ ++ + AC D+ ++ +H I R G VL + + C + +
Sbjct: 26 SPDESHFISLIHACKDTASLRH---VHAQILRRG-----VLSSRVAAQLVSCSSLLKSPD 77
Query: 291 EGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACN 350
+ +F + +E+N F NA+I+GL E ++R F M + GV+ D +T VL + +
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 351 HSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA- 409
G +GR + ++ V+ +VD+ A++G L+ AF+V P K
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVR--LSLVDMYAKTGQLKHAFQVFEESPDRIKKES 195
Query: 410 --MWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGM 467
+W L+ D+ + + R + E NS + L Y + G + +++ +
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSMPE---RNSGSWSTLIKGYVDSGELNRAKQLFEL 252
Query: 468 MKDRQL 473
M ++ +
Sbjct: 253 MPEKNV 258
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 212/420 (50%), Gaps = 35/420 (8%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V +NS+I +S S + A + + PN T +F++
Sbjct: 198 VVSWNSMISGYSQSGSFEDCKKMYK--AMLACSDFKPNGVTVISVFQACGQSSDLIFGLE 255
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VH +++ D+ + N+++G YA L R LFDEM+ +D V++ +I G+ G
Sbjct: 256 VHKKMIENHIQMDLSLCNAVIGFYAKCGSL-DYARALFDEMSEKDSVTYGAIISGYMAHG 314
Query: 218 KFDDALLAFEQMQYAGVA-------------------------------PNRVTMVNALA 246
+A+ F +M+ G++ PN VT+ + L
Sbjct: 315 LVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLP 374
Query: 247 ACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFT 306
+ S ++ G IH F RNG + ++ + T++ID YAK G + RVF + K++++
Sbjct: 375 SLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIA 434
Query: 307 WNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
W A+I A+ + A LF++M+ G + D+VTL AVLSA HSG DM + IF ++
Sbjct: 435 WTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSML 494
Query: 367 EGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEF 426
KY P V+HYACMV +L+R+G L +A E + MP DP +WG+LL + GDLE
Sbjct: 495 T-KYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEI 553
Query: 427 SEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEE 486
+ F +L E+EP N+ Y ++NLY + GRW++ E VR MK L K G S +E E+
Sbjct: 554 ARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEK 613
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 191/426 (44%), Gaps = 47/426 (11%)
Query: 39 LLKDFCHSRL--HVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRP 96
L++ F RL HV Q+ A++++ +++ + +A I+ R
Sbjct: 28 LIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVR- 86
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTP-LSIFAH--MHRNTILPNHYTFPFLFKSLSAPCHF- 152
+ F +N+L+ A++ + ++ + LS + P+ + + K+LS F
Sbjct: 87 NAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFW 146
Query: 153 --AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ A+ VH V++ G D++V N ++ Y + S R++FDEM+ RDVVSW MI
Sbjct: 147 LGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIES-ARKVFDEMSERDVVSWNSMI 205
Query: 211 MGFRNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
G+ +G F+D ++ M + PN VT+++ AC S + G +H + N
Sbjct: 206 SGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHI 265
Query: 270 ELDVVLGTALIDMYAKCGR-------------------------------VEEGVRVFSS 298
++D+ L A+I YAKCG V+E + +FS
Sbjct: 266 QMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSE 325
Query: 299 VKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
++ + TWNA+I GL EE I F M + G R + VTL ++L + +S + G
Sbjct: 326 MESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGG 385
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVM-RCMPFDPTKAMWGSLLVS 417
++I F + + G N+ ++D A+ G L A V C D + W +++ +
Sbjct: 386 KEIHAFAI--RNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK--DRSLIAWTAIITA 441
Query: 418 SKSQGD 423
GD
Sbjct: 442 YAVHGD 447
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 207/390 (53%), Gaps = 5/390 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + S+I F+ + ++ +F+ M + P+ T + S+
Sbjct: 511 IPFKDNACWASMISGFNEYGYLREAI---GLFSEMLDDGTSPDESTLAAVLTVCSSHPSL 567
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ + +H + L+ G + + ++L+ +Y+ L L RQ++D + D VS + +I G
Sbjct: 568 PRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL-KLARQVYDRLPELDPVSCSSLISG 626
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G D L F M +G + + + L A A S +GA +H +I + G +
Sbjct: 627 YSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTE 686
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+G++L+ MY+K G +++ + FS + ++ W A+I A EA++++N M++
Sbjct: 687 PSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKE 746
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
G + D+VT + VLSAC+H GLV+ +V+ YG P +HY CMVD L RSG L
Sbjct: 747 KGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVK-DYGIEPENRHYVCMVDALGRSGRL 805
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
REA + M P +WG+LL + K G++E + A+K +ELEP+++ Y+ LSN+
Sbjct: 806 REAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNIL 865
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
AE+G WD+VE+ R +MK + K+ G SSV
Sbjct: 866 AEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 174/322 (54%), Gaps = 16/322 (4%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
+V+ +N++I + + + N +F M P+ YT+ + + ++ +
Sbjct: 215 NVYCWNTII---AGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGK 271
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
V A V+K G D++V +++ +YA + + ++F + + VVSWTVM+ G+ +
Sbjct: 272 VVQARVIKCGA-EDVFVCTAIVDLYAKCGHM-AEAMEVFSRIPNPSVVSWTVMLSGYTKS 329
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
AL F++M+++GV N T+ + ++AC V + +H ++ ++G+ LD +
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA 389
Query: 277 TALIDMYAKCGRVEEGVRVFS---SVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
ALI MY+K G ++ +VF ++ +N+ N +I + +K +AIRLF RM Q+
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
G+R DE ++ ++LS + +++G+Q+ G+ + K G + ++ + + L ++ GSL
Sbjct: 448 GLRTDEFSVCSLLSVLD---CLNLGKQVHGYTL--KSGLVLDLTVGSSLFTLYSKCGSLE 502
Query: 394 EAFEVMRCMPFDPTKAMWGSLL 415
E++++ + +PF A W S++
Sbjct: 503 ESYKLFQGIPFK-DNACWASMI 523
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 169/398 (42%), Gaps = 43/398 (10%)
Query: 100 IFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVH 159
I N +I +FS S ++ +F M + + + ++ L L + VH
Sbjct: 420 IVNVMITSFSQSKKPGKAIR---LFTRMLQEGLRTDEFSVCSLLSVLDC---LNLGKQVH 473
Query: 160 AHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKF 219
+ LK G + D+ V +SL +Y+ L +LF + +D W MI GF G
Sbjct: 474 GYTLKSGLVLDLTVGSSLFTLYSKCGSL-EESYKLFQGIPFKDNACWASMISGFNEYGYL 532
Query: 220 DDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTAL 279
+A+ F +M G +P+ T+ L C+ ++ G IH + R G + + LG+AL
Sbjct: 533 REAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSAL 592
Query: 280 IDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADE 339
++MY+KCG ++ +V+ + E + + +++I G + ++ LF M G D
Sbjct: 593 VNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDS 652
Query: 340 VTLLAVLSACNHSGLVDMGRQIFGFLVE-----------------GKYGFI--------- 373
+ ++L A S +G Q+ ++ + K+G I
Sbjct: 653 FAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQ 712
Query: 374 ---PNVKHYACMVDLLARSGSLREAFEVMRCMP---FDPTKAMWGSLLVSSKSQGDLEFS 427
P++ + ++ A+ G EA +V M F P K + +L + G +E S
Sbjct: 713 INGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEES 772
Query: 428 EFVARKLVE---LEPANSAYYVHLSNLYAEMGRWDDVE 462
F +V+ +EP N +YV + + GR + E
Sbjct: 773 YFHLNSMVKDYGIEPENR-HYVCMVDALGRSGRLREAE 809
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 144/294 (48%), Gaps = 14/294 (4%)
Query: 140 PFLF---KSLSAPCHFAQAQSVHAHVLKLGHL-HDIYVHNSLLGVYAASPRLFSLCRQLF 195
PF F +S S C+ + + AH+L+ L D+++ SLL Y+ S + + LF
Sbjct: 49 PFRFFNDQSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAK-LF 107
Query: 196 DEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVE 255
D + DVVS +MI G++ F+++L F +M + G N ++ + ++AC+ A
Sbjct: 108 DTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPL 167
Query: 256 MGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLA 315
+ + G+ V+ +ALID+++K R E+ +VF NV+ WN +I G
Sbjct: 168 FSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGAL 227
Query: 316 LAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPN 375
++ LF+ M + D T +VL+AC + + FG +V+ +
Sbjct: 228 RNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC-----ASLEKLRFGKVVQARVIKCGA 282
Query: 376 VKHYAC--MVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS 427
+ C +VDL A+ G + EA EV +P +P+ W ++++S ++ + FS
Sbjct: 283 EDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVVSW-TVMLSGYTKSNDAFS 334
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 190/356 (53%), Gaps = 35/356 (9%)
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VHA ++K D + +L+ Y S +L S R +F+ M +VV T MI G+ N G
Sbjct: 162 VHARIIKCDVELDDVLITALVDTYVKSGKLES-ARTVFETMKDENVVCCTSMISGYMNQG 220
Query: 218 KFDDALLAFE--------------------------------QMQYAGVAPNRVTMVNAL 245
+DA F MQ AG PN T + +
Sbjct: 221 FVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVI 280
Query: 246 AACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVF 305
AC+ + E+G +H I ++G + +G++L+DMYAKCG + + RVF ++EKNVF
Sbjct: 281 GACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVF 340
Query: 306 TWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFL 365
+W ++I G + EEA+ LF RM++ + + VT L LSAC+HSGLVD G +IF +
Sbjct: 341 SWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESM 400
Query: 366 VEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
+ Y P ++HYAC+VDL+ R+G L +AFE R MP P +W +LL S G++E
Sbjct: 401 -QRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVE 459
Query: 426 FSEFVARKLVELEP-ANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCS 480
+ A +L +L Y+ LSN+YA +WD+V K+R +MK R+++K +G S
Sbjct: 460 LASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 170/384 (44%), Gaps = 54/384 (14%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
+F F S+ S+H+ S PL + +++ P Y L + +++P A +
Sbjct: 2 RIFRFTSISPRILPSNHY--STFPL----KQNVSSLSPAKYIAGALQEHINSPAPKA-GK 54
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
+HA ++K G D+ + LL ++ L S RQ+FDE+ + ++ MI G+
Sbjct: 55 KIHADIIKTGFQPDLNISIKLLILHLKCGCL-SYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAV-----EMGAWIHDFIRRNGWEL 271
G + LL ++M Y+G + T+ L A G+ + +H I + EL
Sbjct: 114 GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVEL 173
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNV--------------------------- 304
D VL TAL+D Y K G++E VF ++K++NV
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 305 ----FTWNAVIKGLALAKSGEEAIR---LFNRMEQDGVRADEVTLLAVLSACNHSGLVDM 357
+NA+++G ++SGE A R ++ M++ G + T +V+ AC+ ++
Sbjct: 234 VKDIVVYNAMVEG--FSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEV 291
Query: 358 GRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVS 417
G+Q+ ++ K G ++K + ++D+ A+ G + +A V M + W S++
Sbjct: 292 GQQVHAQIM--KSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ-EKNVFSWTSMIDG 348
Query: 418 SKSQGDLE--FSEFVARKLVELEP 439
G+ E F K +EP
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEP 372
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 3/170 (1%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
+ ++N+++ FS S + + ++ M R PN TF + + S Q
Sbjct: 237 IVVYNAMVEGFSRSGE--TAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQ 294
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VHA ++K G I + +SLL +YA + + R++FD+M ++V SWT MI G+ G
Sbjct: 295 VHAQIMKSGVYTHIKMGSSLLDMYAKCGGI-NDARRVFDQMQEKNVFSWTSMIDGYGKNG 353
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRN 267
++AL F +M+ + PN VT + AL+AC+ SG V+ G I + ++R+
Sbjct: 354 NPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRD 403
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 222/456 (48%), Gaps = 11/456 (2%)
Query: 35 RAVTLLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVP 94
+AV L DF QQ+ A + + ++ + + H +P
Sbjct: 258 KAVVGLHDFALG----QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDE-MP 312
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+N +I ++S + + SL F M ++ F + +
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASL---HFFREMQCMGFDRRNFPFATMLSIAANLSSLQM 369
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+ +H L ++V NSL+ +YA +F +F + R VSWT +I G+
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKC-EMFEEAELIFKSLPQRTTVSWTALISGYV 428
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
G L F +M+ + + ++ T L A A ++ +G +H FI R+G +V
Sbjct: 429 QKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF 488
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
G+ L+DMYAKCG +++ V+VF + ++N +WNA+I A GE AI F +M + G
Sbjct: 489 SGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG 548
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
++ D V++L VL+AC+H G V+ G + F + YG P KHYACM+DLL R+G E
Sbjct: 549 LQPDSVSILGVLTACSHCGFVEQGTEYFQAM-SPIYGITPKKKHYACMLDLLGRNGRFAE 607
Query: 395 AFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEP-ANSAYYVHLSNLYA 453
A ++M MPF+P + MW S+L + + + +E A KL +E ++A YV +SN+YA
Sbjct: 608 AEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYA 667
Query: 454 EMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
G W+ V V+ M++R + K S VEV + H
Sbjct: 668 AAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 703
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 168/349 (48%), Gaps = 9/349 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P FN+LI + + S+ +F M ++ P+ +TF + K++ F
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESI---HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
A Q +HA + G D V N +L Y+ R+ R LFDEM D VS+ V+I
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLE-TRMLFDEMPELDFVSYNVVISS 325
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ A +++ +L F +MQ G L+ A+ +++MG +H +
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ +G +L+DMYAKC EE +F S+ ++ +W A+I G ++LF +M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
+RAD+ T VL A + +G+Q+ F++ + G + NV + +VD+ A+ GS+
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFII--RSGNLENVFSGSGLVDMYAKCGSI 503
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE--LEP 439
++A +V MP D W +L+ + GD E + K++E L+P
Sbjct: 504 KDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 143/334 (42%), Gaps = 11/334 (3%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNT--ILPNHYTFPFLFKSLSAPC 150
+P V + L+ ++ + H + +F M R++ LP+H TF L +
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAF---KLFRQMCRSSSCTLPDHVTFTTLLPGCNDAV 161
Query: 151 HFAQAQSVHAHVLKLGHLHDIY--VHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTV 208
VHA +KLG + + V N LL Y RL C LF+E+ +D V++
Sbjct: 162 PQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC-VLFEEIPEKDSVTFNT 220
Query: 209 MIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG 268
+I G+ G + +++ F +M+ +G P+ T L A +G +H G
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN 328
+ D +G ++D Y+K RV E +F + E + ++N VI + A E ++ F
Sbjct: 281 FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
M+ G +LS + + MGRQ+ + I +V + +VD+ A+
Sbjct: 341 EMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN--SLVDMYAK 398
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
EA + + +P T W +L+ +G
Sbjct: 399 CEMFEEAELIFKSLP-QRTTVSWTALISGYVQKG 431
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 12/241 (4%)
Query: 189 SLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM--QYAGVAPNRVTMVNALA 246
S R LFD M R VV+WT+++ + FD+A F QM + P+ VT L
Sbjct: 96 SSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLP 155
Query: 247 ACADSGAVEMGAWIHDFIRRNGWELD--VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNV 304
C D+ +H F + G++ + + + L+ Y + R++ +F + EK+
Sbjct: 156 GCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDS 215
Query: 305 FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVD--MGRQIF 362
T+N +I G E+I LF +M Q G + + T VL A GL D +G+Q+
Sbjct: 216 VTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFALGQQLH 273
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
V GF + ++D ++ + E + MP + ++++SS SQ
Sbjct: 274 ALSV--TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP--ELDFVSYNVVISSYSQA 329
Query: 423 D 423
D
Sbjct: 330 D 330
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 211/391 (53%), Gaps = 19/391 (4%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVH- 159
+NS+I +S + + +++ +F M P+ T L L A H ++
Sbjct: 201 WNSMISGYSEAGYAKDAM---DLFRKMEEEGFEPDERT---LVSMLGACSHLGDLRTGRL 254
Query: 160 ----AHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
A K+G ++ + L+ +Y L S R++F++M +D V+WT MI +
Sbjct: 255 LEEMAITKKIGL--STFLGSKLISMYGKCGDLDS-ARRVFNQMIKKDRVAWTAMITVYSQ 311
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
GK +A F +M+ GV+P+ T+ L+AC GA+E+G I + ++ +
Sbjct: 312 NGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYV 371
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
T L+DMY KCGRVEE +RVF ++ KN TWNA+I A +EA+ LF+RM V
Sbjct: 372 ATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SV 428
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
++T + VLSAC H+GLV G + F + +G +P ++HY ++DLL+R+G L EA
Sbjct: 429 PPSDITFIGVLSACVHAGLVHQGCRYF-HEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEA 487
Query: 396 FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPA-NSAYYVHLSNLYAE 454
+E M P P + M ++L + + D+ E R L+E++ A N+ YV SN+ A+
Sbjct: 488 WEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLAD 547
Query: 455 MGRWDDVEKVRGMMKDRQLTKDLGCSSVEVE 485
M WD+ K+R +M+DR + K GCS +E+E
Sbjct: 548 MKMWDESAKMRALMRDRGVVKTPGCSWIEIE 578
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 194/389 (49%), Gaps = 11/389 (2%)
Query: 34 DRAVTLLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXV 93
+R L C S ++QIQAQ++LH+++ +F+
Sbjct: 37 ERDFLFLLKKCISVNQLRQIQAQMLLHSVEKP-----NFLIPKAVELGDFNYSSFLFSVT 91
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P+ + FN +IR +++ + H + LS++ M + + P+ +T+ F+F + +
Sbjct: 92 EEPNHYSFNYMIRGLTNTWNDHEA--ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIG 149
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+SVH+ + K+G D+++++SL+ +YA ++ R+LFDE+T RD VSW MI G+
Sbjct: 150 VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQV-GYARKLFDEITERDTVSWNSMISGY 208
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
AG DA+ F +M+ G P+ T+V+ L AC+ G + G + + L
Sbjct: 209 SEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST 268
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
LG+ LI MY KCG ++ RVF+ + +K+ W A+I + EA +LF ME+
Sbjct: 269 FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT 328
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
GV D TL VLSAC G +++G+QI E N+ +VD+ + G +
Sbjct: 329 GVSPDAGTLSTVLSACGSVGALELGKQIETHASE--LSLQHNIYVATGLVDMYGKCGRVE 386
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
EA V MP +A W +++ + QG
Sbjct: 387 EALRVFEAMPV-KNEATWNAMITAYAHQG 414
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 224/427 (52%), Gaps = 37/427 (8%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V +N+++ ++ + H +L + R+ I N ++F L +
Sbjct: 139 MPERDVVSWNTMVIGYAQDGNLHEALW---FYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDV--------- 203
+ H VL G L ++ + S++ YA ++ S ++ FDEMT +D+
Sbjct: 196 QLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES-AKRCFDEMTVKDIHIWTTLISG 254
Query: 204 ----------------------VSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTM 241
VSWT +I G+ G + AL F +M GV P + T
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 242 VNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE 301
+ L A A ++ G IH ++ R + ++ ++LIDMY+K G +E RVF +
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 302 K-NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
K + WN +I LA G +A+R+ + M + V+ + TL+ +L+AC+HSGLV+ G +
Sbjct: 375 KHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLR 434
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKS 420
F + ++G +P+ +HYAC++DLL R+G +E + MPF+P K +W ++L +
Sbjct: 435 WFESMTV-QHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRI 493
Query: 421 QGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCS 480
G+ E + A +L++L+P +SA Y+ LS++YA+ G+W+ VEK+RG+MK R++ K+ S
Sbjct: 494 HGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVS 553
Query: 481 SVEVEEQ 487
+E+E++
Sbjct: 554 WIEIEKK 560
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 145/335 (43%), Gaps = 47/335 (14%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLF--KSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLL 178
L I NT+L NH ++ K + A F Q HL ++Y N+++
Sbjct: 72 LKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM-----------HLRNLYSWNNMV 120
Query: 179 GVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR 238
Y S L R +FD M RDVVSW M++G+ G +AL +++ + +G+ N
Sbjct: 121 SGYVKSGMLVR-ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNE 179
Query: 239 VTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVR---- 294
+ L AC S +++ H + G+ +VVL ++ID YAKCG++E R
Sbjct: 180 FSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 295 ---------------------------VFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLF 327
+F + EKN +W A+I G SG A+ LF
Sbjct: 240 MTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLF 299
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA 387
+M GV+ ++ T + L A + G++I G+++ + PN + ++D+ +
Sbjct: 300 RKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI--RTNVRPNAIVISSLIDMYS 357
Query: 388 RSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+SGSL + V R W +++ + G
Sbjct: 358 KSGSLEASERVFRICDDKHDCVFWNTMISALAQHG 392
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 46/276 (16%)
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL-DVVL 275
+ A+ E + G+ + + L C D+ +++ G WIH ++ G++ + +L
Sbjct: 25 AELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLL 84
Query: 276 GTALIDMYAKCGR--------------------------VEEG--VR---VFSSVKEKNV 304
LI MY KCG+ V+ G VR VF S+ E++V
Sbjct: 85 SNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDV 144
Query: 305 FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGF 364
+WN ++ G A + EA+ + + G++ +E + +L+AC S + + RQ G
Sbjct: 145 VSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQ 204
Query: 365 LVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA----MWGSLLVSSKS 420
++ GF+ NV ++D A+ G + A RC FD +W +L+
Sbjct: 205 VLVA--GFLSNVVLSCSIIDAYAKCGQMESA---KRC--FDEMTVKDIHIWTTLISGYAK 257
Query: 421 QGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMG 456
GD+E +E + E+ N + L Y G
Sbjct: 258 LGDMEAAE---KLFCEMPEKNPVSWTALIAGYVRQG 290
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 233/477 (48%), Gaps = 66/477 (13%)
Query: 34 DRAVTLLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXV 93
+ A+ LL+ F +S ++QI L L SN +A + T C
Sbjct: 14 EDALHLLQRFLYSSNQIKQIHTVL----LTSNALVASRWKTKC----------------- 52
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
++N+LIR++ + + T L++F HM + + PN+ TFP L K+ + +
Sbjct: 53 ------VYNTLIRSYLTTGEYK---TSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVS 103
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYA------ASPRLFS--------LCRQLFD--- 196
++H LK G L D +V S + Y +S ++F C L D
Sbjct: 104 YGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACG 163
Query: 197 -------------EMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM---QYAGVAPNRVT 240
M DVVSWT +I GF G AL+ F +M + A + PN T
Sbjct: 164 RNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEAT 223
Query: 241 MVNALAACA--DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSS 298
V+ L++CA D G + +G IH ++ L LGTAL+DMY K G +E + +F
Sbjct: 224 FVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQ 283
Query: 299 VKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
+++K V WNA+I LA ++A+ +F M+ V + +TLLA+L+AC S LVD+G
Sbjct: 284 IRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSS 418
Q+F + +Y IP +HY C+VDL+ R+G L +A ++ +PF+P ++ G+LL +
Sbjct: 344 IQLFSSICS-EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGAC 402
Query: 419 KSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTK 475
K + E V ++L+ L+P + YV LS A W + EK+R M + + K
Sbjct: 403 KIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRK 459
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 180/313 (57%), Gaps = 2/313 (0%)
Query: 172 YVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQY 231
Y+ S++ +Y RL R+LF+ R+VV WT +I GF + +A F QM
Sbjct: 247 YLQASIIDMYVKC-RLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLR 305
Query: 232 AGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEE 291
+ PN+ T+ L +C+ G++ G +H ++ RNG E+D V T+ IDMYA+CG ++
Sbjct: 306 ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQM 365
Query: 292 GVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNH 351
VF + E+NV +W+++I + EEA+ F++M+ V + VT +++LSAC+H
Sbjct: 366 ARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSH 425
Query: 352 SGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMW 411
SG V G + F + YG +P +HYACMVDLL R+G + EA + MP P + W
Sbjct: 426 SGNVKEGWKQFESMTR-DYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAW 484
Query: 412 GSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDR 471
G+LL + + +++ + +A KL+ +EP S+ YV LSN+YA+ G W+ V VR M +
Sbjct: 485 GALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIK 544
Query: 472 QLTKDLGCSSVEV 484
K +G S+ EV
Sbjct: 545 GYRKHVGQSATEV 557
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 180/386 (46%), Gaps = 9/386 (2%)
Query: 34 DRAVTLLKDFCHSRL--HVQQIQAQLILHNLQSNPTIAHHFITV-CQSHXXXXXXXXXXX 90
+RA LL ++ H QQ+ A++I+H + + QS+
Sbjct: 5 NRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNR 64
Query: 91 XXVPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPC 150
+ + +N+++ +S S S L ++ M R+ + + F K+
Sbjct: 65 IPCWKRNRHSWNTILSGYSKSKTCCYS-DVLLLYNRMRRHCDGVDSFNLVFAIKACVGLG 123
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+H +K G D YV SL+ +YA + S +++FDE+ R+ V W V++
Sbjct: 124 LLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMES-AQKVFDEIPVRNSVLWGVLM 182
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDF-IRRNGW 269
G+ K + F M+ G+A + +T++ + AC + A ++G +H IRR+
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
+ L ++IDMY KC ++ ++F + ++NV W +I G A + EA LF +
Sbjct: 243 DQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQ 302
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
M ++ + ++ TL A+L +C+ G + G+ + G+++ + G + ++ +D+ AR
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI--RNGIEMDAVNFTSFIDMYARC 360
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLL 415
G+++ A V MP + W S++
Sbjct: 361 GNIQMARTVFDMMP-ERNVISWSSMI 385
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 217/440 (49%), Gaps = 6/440 (1%)
Query: 51 QQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSH 110
+QI +Q+I N Q N + I + + V + ++I ++
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDM-YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568
Query: 111 SHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHD 170
+ +LT F M I + + + + Q +HA G D
Sbjct: 569 YNFDDKALTT---FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 171 IYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQ 230
+ N+L+ +Y+ ++ F++ D ++W ++ GF+ +G ++AL F +M
Sbjct: 626 LPFQNALVTLYSRCGKI-EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 231 YAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVE 290
G+ N T +A+ A +++ ++ G +H I + G++ + + ALI MYAKCG +
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 291 EGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACN 350
+ + F V KN +WNA+I + G EA+ F++M VR + VTL+ VLSAC+
Sbjct: 745 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
Query: 351 HSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAM 410
H GLVD G F + +YG P +HY C+VD+L R+G L A E ++ MP P +
Sbjct: 805 HIGLVDKGIAYFESM-NSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV 863
Query: 411 WGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKD 470
W +LL + ++E EF A L+ELEP +SA YV LSNLYA +WD + R MK+
Sbjct: 864 WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 471 RQLTKDLGCSSVEVEEQGHT 490
+ + K+ G S +EV+ H+
Sbjct: 924 KGVKKEPGQSWIEVKNSIHS 943
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 148/299 (49%), Gaps = 6/299 (2%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
+V ++N ++ A+ NS IF M I+PN YT+P + K+ +
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSF---RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
+H+ ++K + YV + L+ +YA +L + +DVVSWT MI G+
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKL-DTAWDILIRFAGKDVVSWTTMIAGYTQY 569
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
D AL F QM G+ + V + NA++ACA A++ G IH +G+ D+
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
AL+ +Y++CG++EE F + + WNA++ G + + EEA+R+F RM ++G+
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+ T + + A + + + G+Q+ + K G+ + ++ + A+ GS+ +A
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVIT--KTGYDSETEVCNALISMYAKCGSISDA 746
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 180/404 (44%), Gaps = 44/404 (10%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPL-SIFAHMHRNTILPNHYTFPFLFKSL-SAPC 150
+P +F +N +I+ + N + + +F M + PN TF + ++
Sbjct: 146 MPERTIFTWNKMIKELAS----RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
F + +HA +L G V N L+ +Y+ + L R++FD + +D SW MI
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNG-FVDLARRVFDGLRLKDHSSWVAMI 260
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G +A+ F M G+ P + L+AC ++E+G +H + + G+
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
D + AL+ +Y G + +FS++ +++ T+N +I GL+ GE+A+ LF RM
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
DG+ D TL +++ AC+ G + G+Q+ + K GF N K +++L A+
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT--KLGFASNNKIEGALLNLYAKCA 438
Query: 391 -------------------------------SLREAFEVMRCMPFD---PTKAMWGSLLV 416
LR +F + R M + P + + S+L
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 417 SSKSQGDLEFSEFVARKLVELEPANSAYYVH-LSNLYAEMGRWD 459
+ GDLE E + ++++ +AY L ++YA++G+ D
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 15/329 (4%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+N+LI S + ++ +F MH + + P+ T L + SA + Q +HA
Sbjct: 357 YNTLINGLSQCGYGEKAM---ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
+ KLG + + +LL +YA + F E +VV W VM++ +
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADI-ETALDYFLETEVENVVLWNVMLVAYGLLDDLR 472
Query: 221 DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALI 280
++ F QMQ + PN+ T + L C G +E+G IH I + ++L+ + + LI
Sbjct: 473 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLI 532
Query: 281 DMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEV 340
DMYAK G+++ + K+V +W +I G ++A+ F +M G+R+DEV
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 592
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
L +SAC + G+QI GF ++ +V L +R G + E++
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACVS--GFSSDLPFQNALVTLYSRCGKIEESY---- 646
Query: 401 CMPFDPTKA----MWGSLLVSSKSQGDLE 425
+ F+ T+A W +L+ + G+ E
Sbjct: 647 -LAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 160/350 (45%), Gaps = 7/350 (2%)
Query: 50 VQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFS 109
V+QI A+++ L+ + + + I + + + H +S + S
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH----SSWVAMIS 261
Query: 110 HSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLH 169
+ + +F M+ I+P Y F + + + +H VLKLG
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 170 DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM 229
D YV N+L+ +Y L S +F M+ RD V++ +I G G + A+ F++M
Sbjct: 322 DTYVCNALVSLYFHLGNLIS-AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 230 QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRV 289
G+ P+ T+ + + AC+ G + G +H + + G+ + + AL+++YAKC +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 290 EEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSAC 349
E + F + +NV WN ++ L + R+F +M+ + + ++ T ++L C
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 350 NHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVM 399
G +++G QI ++ K F N + ++D+ A+ G L A++++
Sbjct: 501 IRLGDLELGEQIHSQII--KTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 5/273 (1%)
Query: 132 ILPNHYTFPFLFKS-LSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSL 190
I PNH T +L + L + + +H+ +LKLG + + L Y L+
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 191 CRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAAC-A 249
+ +FDEM R + +W MI + + F +M V PN T L AC
Sbjct: 140 FK-VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 250 DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA 309
S A ++ IH I G V+ LID+Y++ G V+ RVF ++ K+ +W A
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 310 VIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK 369
+I GL+ + EAIRLF M G+ +VLSAC +++G Q+ G ++ K
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL--K 316
Query: 370 YGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
GF + +V L G+L A + M
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 115/286 (40%), Gaps = 47/286 (16%)
Query: 227 EQMQYAGVAPNRVTMVNALAACADS-GAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAK 285
+ ++ G+ PN T+ L C + G+++ G +H I + G + + L L D Y
Sbjct: 73 DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF 132
Query: 286 CGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAV 345
G + +VF + E+ +FTWN +IK LA E LF RM + V +E T V
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 346 LSAC------------------------------------NHSGLVDMGRQIFGFLVEGK 369
L AC + +G VD+ R++F L
Sbjct: 193 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR--- 249
Query: 370 YGFIPNVKHYACMVDLLARSGSLREAFEV---MRCMPFDPTKAMWGSLLVSSKSQGDLEF 426
+ + + M+ L+++ EA + M + PT + S+L + K LE
Sbjct: 250 ---LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 427 SEFVARKLVELEPANSAYYVH-LSNLYAEMGRWDDVEKVRGMMKDR 471
E + +++L ++ Y + L +LY +G E + M R
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 182/333 (54%), Gaps = 3/333 (0%)
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
H S+H + +K G V N L+ +Y+ + ++ LF+++ ++SW +I
Sbjct: 362 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLF-LFEQLQETPLISWNSVI 420
Query: 211 MGFRNAGKFDDALLAFEQMQY-AGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
G +G+ A F QM G+ P+ +T+ + LA C+ + +G +H + RN +
Sbjct: 421 SGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF 480
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
E + + TALIDMYAKCG + VF S+K TWN++I G +L+ A+ +
Sbjct: 481 ENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLE 540
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
M + G++ DE+T L VLSACNH G VD G+ F +++ ++G P ++HYA MV LL R+
Sbjct: 541 MREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK-EFGISPTLQHYALMVGLLGRA 599
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLS 449
EA ++ M P A+WG+LL + +LE E+VARK+ L+ N YV +S
Sbjct: 600 CLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMS 659
Query: 450 NLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
NLYA WDDV +VR MMKD LG S +
Sbjct: 660 NLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 126/250 (50%), Gaps = 6/250 (2%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF--AQAQSV 158
F+SL+++ H S +P++IF + R+++ PNH+T ++ + + Q + V
Sbjct: 16 FHSLLKSCIHGEI---SSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQV 72
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
H+ K G +YV SLL +Y + S + LFDEM RD V W +I G+ G
Sbjct: 73 QTHLTKSGLDRFVYVKTSLLNLYLKKGCVTS-AQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 219 FDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTA 278
DA F M G +P+ T+VN L C G V G +H ++G ELD + A
Sbjct: 132 ECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNA 191
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRAD 338
LI Y+KC + +F +K+K+ +WN +I + + EEAI +F M + V
Sbjct: 192 LISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEIS 251
Query: 339 EVTLLAVLSA 348
VT++ +LSA
Sbjct: 252 PVTIINLLSA 261
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 154/318 (48%), Gaps = 18/318 (5%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+N++I A+S S ++T +F +M + + T L + H + + +H
Sbjct: 220 WNTMIGAYSQSGLQEEAIT---VFKNMFEKNVEISPVTIINLLSA-----HVSH-EPLHC 270
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
V+K G ++DI V SL+ Y+ L S +L+ +V T ++ + G D
Sbjct: 271 LVVKCGMVNDISVVTSLVCAYSRCGCLVS-AERLYASAKQDSIVGLTSIVSCYAEKGDMD 329
Query: 221 DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALI 280
A++ F + + + + V +V L C S +++G +H + ++G ++ LI
Sbjct: 330 IAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLI 389
Query: 281 DMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME-QDGVRADE 339
MY+K VE + +F ++E + +WN+VI G + A +F++M G+ D
Sbjct: 390 TMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDA 449
Query: 340 VTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC--MVDLLARSGSLREAFE 397
+T+ ++L+ C+ +++G+++ G+ + + +++ C ++D+ A+ G+ +A
Sbjct: 450 ITIASLLAGCSQLCCLNLGKELHGYTLRNNF----ENENFVCTALIDMYAKCGNEVQAES 505
Query: 398 VMRCMPFDPTKAMWGSLL 415
V + + P A W S++
Sbjct: 506 VFKSIK-APCTATWNSMI 522
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 16/256 (6%)
Query: 226 FEQMQYAGVAPNRVTMVNALAACADS-GAVEMGA-WIHDFIRRNGWELDVVLGTALIDMY 283
F + + + PN TM L A S + ++ + + ++G + V + T+L+++Y
Sbjct: 36 FRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLY 95
Query: 284 AKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLL 343
K G V +F + E++ WNA+I G + +A +LF M Q G TL+
Sbjct: 96 LKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLV 155
Query: 344 AVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMP 403
+L C G V GR + G V K G + + ++ ++ L A + R M
Sbjct: 156 NLLPFCGQCGFVSQGRSVHG--VAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMK 213
Query: 404 FDPTKAMWGSLLVSSKSQGDLEFSEFVARKL----VELEPAN-----SAYYVH--LSNLY 452
D + W +++ + G E + V + + VE+ P SA+ H L L
Sbjct: 214 -DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLV 272
Query: 453 AEMGRWDDVEKVRGMM 468
+ G +D+ V ++
Sbjct: 273 VKCGMVNDISVVTSLV 288
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 201/379 (53%), Gaps = 11/379 (2%)
Query: 114 HHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS----VHAHVLKLGHLH 169
+ N + +F M R + PN T L L A S +H + G
Sbjct: 229 NQNYEMGVDLFRAMQRENLRPNRVT---LLSVLPACVELNYGSSLVKEIHGFSFRHGCHA 285
Query: 170 DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM 229
D + + + +Y + SL R LF+ RDVV W+ MI G+ G + + QM
Sbjct: 286 DERLTAAFMTMYCRCGNV-SLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQM 344
Query: 230 QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRV 289
+ G+ N VT++ ++AC +S + + +H I + G+ ++LG ALIDMYAKCG +
Sbjct: 345 RKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSL 404
Query: 290 EEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSAC 349
VF + EK++ +W+++I L G EA+ +F M + G D++ LA+LSAC
Sbjct: 405 SAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSAC 464
Query: 350 NHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA 409
NH+GLV+ + I F GKY ++HYAC ++LL R G + +AFEV MP P+
Sbjct: 465 NHAGLVEEAQTI--FTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSAR 522
Query: 410 MWGSLLVSSKSQGDLEFS-EFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMM 468
+W SLL + ++ G L+ + + +A +L++ EP N A YV LS ++ E G + E+VR +M
Sbjct: 523 IWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVM 582
Query: 469 KDRQLTKDLGCSSVEVEEQ 487
+ R+L K G S +E E Q
Sbjct: 583 QRRKLNKCYGFSKIEPELQ 601
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 141/299 (47%), Gaps = 24/299 (8%)
Query: 139 FPFLFKSLSAPCHFAQ-----AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQ 193
F + S+ C F Q +H LK G D V NSL+ +YA R +++ R+
Sbjct: 45 FTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAV-RK 103
Query: 194 LFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGA 253
+FDEM HRD VS+ +I G +A+ ++M + G P + + LA C G+
Sbjct: 104 VFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGS 163
Query: 254 V-EMGAWIHDFIRRNG-WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVI 311
++ H + + + V+L TAL+DMY K VF ++ KN +W A+I
Sbjct: 164 SSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMI 223
Query: 312 KGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSAC---NH-SGLVDMGRQIFGFLVE 367
G ++ E + LF M+++ +R + VTLL+VL AC N+ S LV ++I GF
Sbjct: 224 SGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV---KEIHGF--S 278
Query: 368 GKYGFIPNVKHYACMVDLLARSGSL---REAFEVMRCMPFDPTKAMWGSLLVSSKSQGD 423
++G + + A + + R G++ R FE + MW S++ GD
Sbjct: 279 FRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDV----VMWSSMISGYAETGD 333
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/392 (32%), Positives = 216/392 (55%), Gaps = 11/392 (2%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V +N++I AF + L + M + ++ T L + S + +
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLM---LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQ 440
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTH--RDVVSWTVMIMGFRN 215
HA +++ G + +++ L+ +Y+ S L + ++LF+ + RD +W MI G+
Sbjct: 441 THAFLIRQG-IQFEGMNSYLIDMYSKSG-LIRISQKLFEGSGYAERDQATWNSMISGYTQ 498
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
G + L F +M + PN VT+ + L AC+ G+V++G +H F R + +V +
Sbjct: 499 NGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFV 558
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
+AL+DMY+K G ++ +FS KE+N T+ +I G GE AI LF M++ G+
Sbjct: 559 ASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGI 618
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+ D +T +AVLSAC++SGL+D G +IF + E Y P+ +HY C+ D+L R G + EA
Sbjct: 619 KPDAITFVAVLSACSYSGLIDEGLKIFEEMRE-VYNIQPSSEHYCCITDMLGRVGRVNEA 677
Query: 396 FEVMRCMPFDPTKA-MWGSLLVSSKSQGDLEFSEFVARKLVELEPAN--SAYYVHLSNLY 452
+E ++ + + A +WGSLL S K G+LE +E V+ +L + + S Y V LSN+Y
Sbjct: 678 YEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMY 737
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
AE +W V+KVR M+++ L K++G S +E+
Sbjct: 738 AEEQKWKSVDKVRRGMREKGLKKEVGRSGIEI 769
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 174/346 (50%), Gaps = 11/346 (3%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
R +V +N+LI + + + + I M R + P+ +F +F ++S +
Sbjct: 176 RKNVVAWNTLISWYVKTGRNAEACRQFGI---MMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 155 AQSVHAHVLKLG--HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
A + +LKLG ++ D++V +S + +YA + S R++FD R++ W MI
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIES-SRRVFDSCVERNIEVWNTMIGV 291
Query: 213 F-RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ +N + L E + + + VT + A +A + VE+G H F+ +N EL
Sbjct: 292 YVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFREL 351
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+V+ +L+ MY++CG V + VF S++E++V +WN +I +E + L M+
Sbjct: 352 PIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 411
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ G + D +T+ A+LSA ++ ++G+Q FL+ F + Y ++D+ ++SG
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF-EGMNSY--LIDMYSKSGL 468
Query: 392 LREAFEVMRCMPF-DPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE 436
+R + ++ + + +A W S++ G E + V RK++E
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 164/349 (46%), Gaps = 21/349 (6%)
Query: 66 PTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFA 125
P+I +CQ +P+P ++N++I F ++ H +L ++
Sbjct: 40 PSIRSRLSKICQDGNPQLARQLFDA--IPKPTTVLWNTIIIGFICNNLPHEALL---FYS 94
Query: 126 HMHRNTILPN--HYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAA 183
M + N YT+ K+ + + ++VH H+++ VHNSL+ +Y +
Sbjct: 95 RMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVS 154
Query: 184 ---SPRLFS--LCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR 238
+P F + R++FD M ++VV+W +I + G+ +A F M V P+
Sbjct: 155 CLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSP 214
Query: 239 VTMVNALAACADSGAVEMGAWIHDFIRRNGWEL--DVVLGTALIDMYAKCGRVEEGVRVF 296
V+ VN A + S +++ + + + G E D+ + ++ I MYA+ G +E RVF
Sbjct: 215 VSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVF 274
Query: 297 SSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR---ADEVTLLAVLSACNHSG 353
S E+N+ WN +I E+I LF +E G + +DEVT L SA +
Sbjct: 275 DSCVERNIEVWNTMIGVYVQNDCLVESIELF--LEAIGSKEIVSDEVTYLLAASAVSALQ 332
Query: 354 LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
V++GRQ GF V + +P V + MV + +R GS+ ++F V M
Sbjct: 333 QVELGRQFHGF-VSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSM 379
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 203/370 (54%), Gaps = 3/370 (0%)
Query: 121 LSIFAHM-HRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLG 179
+++F+ M + + PNH+TF FK+ + V K G + V NS++
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS 416
Query: 180 VYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRV 239
++ S R+ R F+ ++ +++VS+ + G F+ A ++ + +
Sbjct: 417 MFVKSDRMEDAQRA-FESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAF 475
Query: 240 TMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV 299
T + L+ A+ G++ G IH + + G + + ALI MY+KCG ++ RVF+ +
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 300 KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGR 359
+ +NV +W ++I G A + FN+M ++GV+ +EVT +A+LSAC+H GLV G
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 360 QIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSK 419
+ F + E + P ++HYACMVDLL R+G L +AFE + MPF +W + L + +
Sbjct: 596 RHFNSMYE-DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACR 654
Query: 420 SQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGC 479
+ E + ARK++EL+P A Y+ LSN+YA G+W++ ++R MK+R L K+ GC
Sbjct: 655 VHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGC 714
Query: 480 SSVEVEEQGH 489
S +EV ++ H
Sbjct: 715 SWIEVGDKIH 724
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 21/325 (6%)
Query: 127 MHRNTILP-NHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASP 185
M R+ I P + TF L KS F + VHA +++ D ++NSL+ +Y+ S
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 186 RLFSLCRQLFDEMTH---RDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
+ +F+ M RDVVSW+ M+ + N G+ DA+ F + G+ PN
Sbjct: 112 DS-AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 243 NALAACADSGAVEMGAWIHDFIRRNG-WELDVVLGTALIDMYAKC-GRVEEGVRVFSSVK 300
+ AC++S V +G F+ + G +E DV +G +LIDM+ K E +VF +
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
E NV TW +I EAIR F M G +D+ TL +V SAC + +G+Q
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLAR---SGSLREAFEVMRCMPFDPTKAMWGSLLVS 417
+ + + + G + +V+ +VD+ A+ GS+ + +V M D + W +L+
Sbjct: 291 LHSWAI--RSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITG 345
Query: 418 SKSQGDLE------FSEFVARKLVE 436
+L FSE + + VE
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVE 370
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 10/284 (3%)
Query: 118 LTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLH-DIYVHNS 176
L + +F ++PN Y + + ++ S + ++K GH D+ V S
Sbjct: 148 LDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207
Query: 177 LLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP 236
L+ ++ F ++FD+M+ +VV+WT+MI G +A+ F M +G
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 237 NRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKC---GRVEEGV 293
++ T+ + +ACA+ + +G +H + R+G DV +L+DMYAKC G V++
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCR 325
Query: 294 RVFSSVKEKNVFTWNAVIKG-LALAKSGEEAIRLFNRMEQDG-VRADEVTLLAVLSACNH 351
+VF +++ +V +W A+I G + EAI LF+ M G V + T + AC +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 352 SGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+G+Q+ G K G N ++ + +S + +A
Sbjct: 386 LSDPRVGKQVLGQAF--KRGLASNSSVANSVISMFVKSDRMEDA 427
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 212/381 (55%), Gaps = 7/381 (1%)
Query: 111 SHHHHNSLTPLSI--FAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHL 168
S + +N L +I + M ++++ P+ T + + + +H +K +
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
+ V N+L+ +Y+ + +F + ++V+SWT +I G R + +AL+ Q
Sbjct: 431 SYVIVANNLINMYSKC-KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489
Query: 229 MQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGR 288
M+ + PN +T+ ALAACA GA+ G IH + R G LD L AL+DMY +CGR
Sbjct: 490 MKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGR 548
Query: 289 VEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
+ F+S K K+V +WN ++ G + G + LF+RM + VR DE+T +++L
Sbjct: 549 MNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCG 607
Query: 349 CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTK 408
C+ S +V G F + + YG PN+KHYAC+VDLL R+G L+EA + ++ MP P
Sbjct: 608 CSKSQMVRQGLMYFSKMED--YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP 665
Query: 409 AMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMM 468
A+WG+LL + + ++ E A+ + EL+ + YY+ L NLYA+ G+W +V KVR MM
Sbjct: 666 AVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMM 725
Query: 469 KDRQLTKDLGCSSVEVEEQGH 489
K+ LT D GCS VEV+ + H
Sbjct: 726 KENGLTVDAGCSWVEVKGKVH 746
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 143/272 (52%), Gaps = 3/272 (1%)
Query: 132 ILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLC 191
+ P+ YTFP + ++ A+ + VH HV++ G+ DI V N+L+ +Y + S
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS-A 250
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADS 251
R LFD M RD++SW MI G+ G + L F M+ V P+ +T+ + ++AC
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 252 GAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVI 311
G +G IH ++ G+ +D+ + +L MY G E ++FS ++ K++ +W +I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 312 KGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG 371
G ++AI + M+QD V+ DE+T+ AVLSAC G +D G ++ ++ +
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR-- 428
Query: 372 FIPNVKHYACMVDLLARSGSLREAFEVMRCMP 403
I V ++++ ++ + +A ++ +P
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 8/259 (3%)
Query: 142 LFKSLSAPCHFAQAQSVHAHV--LKLGHLHDIYVH--NSLLGVYAASPRLFSLCRQLFDE 197
+F +L C + +AQ + V + L + + V N+ L ++ L +F +
Sbjct: 96 VFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVD-AWYVFGK 154
Query: 198 MTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQY-AGVAPNRVTMVNALAACADSGAVEM 256
M+ R++ SW V++ G+ G FD+A+ + +M + GV P+ T L C +
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 257 GAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLAL 316
G +H + R G+ELD+ + ALI MY KCG V+ +F + +++ +WNA+I G
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 317 AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNV 376
E + LF M V D +TL +V+SAC G +GR I +++ GF ++
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI--TTGFAVDI 332
Query: 377 KHYACMVDLLARSGSLREA 395
+ + +GS REA
Sbjct: 333 SVCNSLTQMYLNAGSWREA 351
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 7/190 (3%)
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
GK ++A+ MQ VA + V + C A E G+ ++ + L V LG
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ-DGV 335
A + M+ + G + + VF + E+N+F+WN ++ G A +EA+ L++RM GV
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 336 RADEVTLLAVLSACNHSGLVDM--GRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
+ D T VL C G+ D+ G+++ +V +YG+ ++ ++ + + G ++
Sbjct: 193 KPDVYTFPCVLRTC--GGIPDLARGKEVHVHVV--RYGYELDIDVVNALITMYVKCGDVK 248
Query: 394 EAFEVMRCMP 403
A + MP
Sbjct: 249 SARLLFDRMP 258
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 195/336 (58%), Gaps = 7/336 (2%)
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
+ +H H+L+ G L D + N L+ VY R ++F+ + +DVVSWT MI
Sbjct: 507 KEIHCHILRKGLL-DTVIQNELVDVYGKC-RNMGYATRVFESIKGKDVVSWTSMISSSAL 564
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
G +A+ F +M G++ + V ++ L+A A A+ G IH ++ R G+ L+ +
Sbjct: 565 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
A++DMYA CG ++ VF ++ K + + ++I + G+ A+ LF++M + V
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFL--VEGKYGFIPNVKHYACMVDLLARSGSLR 393
D ++ LA+L AC+H+GL+D GR GFL +E +Y P +HY C+VD+L R+ +
Sbjct: 685 SPDHISFLALLYACSHAGLLDEGR---GFLKIMEHEYELEPWPEHYVCLVDMLGRANCVV 741
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYA 453
EAFE ++ M +PT +W +LL + +S + E E A++L+ELEP N V +SN++A
Sbjct: 742 EAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFA 801
Query: 454 EMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
E GRW+DVEKVR MK + K GCS +E++ + H
Sbjct: 802 EQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVH 837
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 154/298 (51%), Gaps = 8/298 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P F +N++I A+ + + L+++ +M + +FP L K+ +
Sbjct: 142 MPDRTAFAWNTMIGAYVS---NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDI 198
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR-DVVSWTVMIM 211
+H+ ++KLG+ ++ N+L+ +YA + L S R+LFD + D V W ++
Sbjct: 199 RSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDL-SAARRLFDGFQEKGDAVLWNSILS 257
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIH-DFIRRNGWE 270
+ +GK + L F +M G APN T+V+AL AC ++G IH ++ +
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
++ + ALI MY +CG++ + R+ + +V TWN++IKG +EA+ F+ M
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
G ++DEV++ ++++A + G ++ +++ K+G+ N++ ++D+ ++
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI--KHGWDSNLQVGNTLIDMYSK 433
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 163/338 (48%), Gaps = 9/338 (2%)
Query: 100 IFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVH 159
++NS++ ++S S SL L +F MH PN YT + + + +H
Sbjct: 251 LWNSILSSYSTSG---KSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 160 AHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
A VLK H ++YV N+L+ +Y ++ ++ +M + DVV+W +I G+
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKM-PQAERILRQMNNADVVTWNSLIKGYVQNLM 366
Query: 219 FDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTA 278
+ +AL F M AG + V+M + +AA + G +H ++ ++GW+ ++ +G
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNT 426
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRAD 338
LIDMY+KC R F + +K++ +W VI G A EA+ LF + + + D
Sbjct: 427 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEID 486
Query: 339 EVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
E+ L ++L A + + + ++I ++ + G + V +VD+ + ++ A V
Sbjct: 487 EMILGSILRASSVLKSMLIVKEIHCHIL--RKGLLDTVIQNE-LVDVYGKCRNMGYATRV 543
Query: 399 MRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE 436
+ + W S++ SS G+ + + R++VE
Sbjct: 544 FESIKGKDVVS-WTSMISSSALNGNESEAVELFRRMVE 580
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 140/328 (42%), Gaps = 26/328 (7%)
Query: 93 VPRPHVFIFNS-LIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCH 151
VP P + F+ L AF N+ +P+ FA Y K +
Sbjct: 52 VPSPKLACFDGVLTEAFQRLDVSENN-SPVEAFA-----------YVLELCGKRRAV--- 96
Query: 152 FAQAQSVHAHVLKLGHLHDI-YVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+Q + +H+ + K ++ ++ L+ +Y L ++FDEM R +W MI
Sbjct: 97 -SQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDD-AEKVFDEMPDRTAFAWNTMI 154
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
+ + G+ AL + M+ GV + L ACA + G+ +H + + G+
Sbjct: 155 GAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYH 214
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK-NVFTWNAVIKGLALAKSGEEAIRLFNR 329
+ AL+ MYAK + R+F +EK + WN+++ + + E + LF
Sbjct: 215 STGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFRE 274
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC--MVDLLA 387
M G + T+++ L+AC+ +G++I +++ + + Y C ++ +
Sbjct: 275 MHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS---THSSELYVCNALIAMYT 331
Query: 388 RSGSLREAFEVMRCMPFDPTKAMWGSLL 415
R G + +A ++R M + W SL+
Sbjct: 332 RCGKMPQAERILRQMN-NADVVTWNSLI 358
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 210/393 (53%), Gaps = 9/393 (2%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTI--LPNHYTFPFLFKSLSAPCHFAQAQSV 158
+N++I F H+ + +L F M I P+ +T L K+ S+ + +
Sbjct: 176 WNAMIAGFVHAGYGSKAL---DTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQI 232
Query: 159 HAHVLKLGH--LHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
H +++ G + SL+ +Y LFS R+ FD++ + ++SW+ +I+G+
Sbjct: 233 HGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS-ARKAFDQIKEKTMISWSSLILGYAQE 291
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
G+F +A+ F+++Q + + + + AD + G + + L+ +
Sbjct: 292 GEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL 351
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
+++DMY KCG V+E + F+ ++ K+V +W VI G G++++R+F M + +
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
DEV LAVLSAC+HSG++ G ++F L+E +G P V+HYAC+VDLL R+G L+EA
Sbjct: 412 PDEVCYLAVLSACSHSGMIKEGEELFSKLLE-THGIKPRVEHYACVVDLLGRAGRLKEAK 470
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMG 456
++ MP P +W +LL + GD+E + V + L+ ++ N A YV +SNLY + G
Sbjct: 471 HLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAG 530
Query: 457 RWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
W++ R + + L K+ G S VE+E + H
Sbjct: 531 YWNEQGNARELGNIKGLKKEAGMSWVEIEREVH 563
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 155/289 (53%), Gaps = 10/289 (3%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
Q VH ++LK G ++ N L+ +Y R + ++FD M R+VVSW+ ++ G
Sbjct: 24 QGGQVHCYLLKSGSGLNLITSNYLIDMYCKC-REPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
G +L F +M G+ PN T L AC A+E G IH F + G+E+ V
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV 142
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
+G +L+DMY+KCGR+ E +VF + ++++ +WNA+I G A G +A+ F M++
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 334 GV--RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG- 390
+ R DE TL ++L AC+ +G++ G+QI GFLV + + +VDL + G
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 391 --SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVEL 437
S R+AF+ ++ + T W SL++ +G+ + + ++L EL
Sbjct: 263 LFSARKAFDQIK----EKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 140/279 (50%), Gaps = 7/279 (2%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
LS+F+ M R I PN +TF K+ + +H LK+G + V NSL+ +
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA--PNR 238
Y+ R+ + ++F + R ++SW MI GF +AG AL F MQ A + P+
Sbjct: 152 YSKCGRI-NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210
Query: 239 VTMVNALAACADSGAVEMGAWIHDFIRRNGWEL--DVVLGTALIDMYAKCGRVEEGVRVF 296
T+ + L AC+ +G + G IH F+ R+G+ + +L+D+Y KCG + + F
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 297 SSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVD 356
+KEK + +W+++I G A EA+ LF R+++ + D L +++ L+
Sbjct: 271 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLR 330
Query: 357 MGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
G+Q+ V+ G +V + +VD+ + G + EA
Sbjct: 331 QGKQMQALAVKLPSGLETSVLN--SVVDMYLKCGLVDEA 367
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 4/181 (2%)
Query: 236 PN-RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVR 294
PN R +V+ L C G + G +H ++ ++G L+++ LIDMY KC +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 295 VFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGL 354
VF S+ E+NV +W+A++ G L + ++ LF+ M + G+ +E T L AC
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 355 VDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSL 414
++ G QI GF + K GF V+ +VD+ ++ G + EA +V R + D + W ++
Sbjct: 123 LEKGLQIHGFCL--KIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAM 179
Query: 415 L 415
+
Sbjct: 180 I 180
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 206/388 (53%), Gaps = 7/388 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P+P V +N+++ +S+ H+ ++ S F M + P+ T + S +
Sbjct: 376 IPQPSVSAWNAMLSGYSNYEHYEEAI---SNFRQMQFQNLKPDKTTLSVILSSCARLRFL 432
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDE-MTHRDVVSWTVMIM 211
+ +H V++ + ++ + L+ VY+ ++ + +FD+ + D+ W MI
Sbjct: 433 EGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM-EISECIFDDCINELDIACWNSMIS 491
Query: 212 GFRNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
GFR+ AL+ F +M Q A + PN + L++C+ ++ G H + ++G+
Sbjct: 492 GFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYV 551
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
D + TAL DMY KCG ++ + F +V KN WN +I G G+EA+ L+ +M
Sbjct: 552 SDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM 611
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
G + D +T ++VL+AC+HSGLV+ G +I + + +G P + HY C+VD L R+G
Sbjct: 612 ISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM-QRIHGIEPELDHYICIVDCLGRAG 670
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSN 450
L +A ++ P+ + +W LL S + GD+ + VA KL+ L+P +SA YV LSN
Sbjct: 671 RLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSN 730
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLG 478
Y+ + +WDD ++G+M ++ K G
Sbjct: 731 TYSSLRQWDDSAALQGLMNKNRVHKTPG 758
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 149/345 (43%), Gaps = 18/345 (5%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V +N++I +L ++ M + LP+ +T + + S
Sbjct: 98 MPERDVVSWNNMISVLVRKGFEEKALV---VYKRMVCDGFLPSRFTLASVLSACSKVLDG 154
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
H +K G +I+V N+LL +YA + ++F+ ++ + VS+T +I G
Sbjct: 155 VFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGG 214
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAV---------EMGAWIHDF 263
K +A+ F M GV + V + N L+ A E+G IH
Sbjct: 215 LARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCL 274
Query: 264 IRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEA 323
R G+ D+ L +L+++YAK + +F+ + E NV +WN +I G +++
Sbjct: 275 ALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKS 334
Query: 324 IRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMV 383
+ RM G + +EVT ++VL AC SG V+ GR+IF + + P+V + M+
Sbjct: 335 VEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ------PSVSAWNAML 388
Query: 384 DLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSE 428
+ EA R M F K +L V S L F E
Sbjct: 389 SGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLE 433
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 2/197 (1%)
Query: 168 LHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFE 227
+ D+Y N+ L L C ++FD M RDVVSW MI G + AL+ ++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEAC-EVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYK 127
Query: 228 QMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCG 287
+M G P+R T+ + L+AC+ G H + G + ++ +G AL+ MYAKCG
Sbjct: 128 RMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 187
Query: 288 -RVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVL 346
V+ GVRVF S+ + N ++ AVI GLA EA+++F M + GV+ D V L +L
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Query: 347 SACNHSGLVDMGRQIFG 363
S D +I+G
Sbjct: 248 SISAPREGCDSLSEIYG 264
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 36/212 (16%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+ +H L+LG D++++NSLL +YA + + + +F EM +VVSW +MI+GF
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDM-NGAELIFAEMPEVNVVSWNIMIVGFG 326
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
+ D ++ +M+ +G PN VT ++ L AC SG V
Sbjct: 327 QEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDV-------------------- 366
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
E G R+FSS+ + +V WNA++ G + + EEAI F +M+
Sbjct: 367 ---------------ETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQN 411
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
++ D+ TL +LS+C ++ G+QI G ++
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 4/206 (1%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADS 251
R++F + V +W M+ G+ N +++A+ F QMQ+ + P++ T+ L++CA
Sbjct: 370 RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL 429
Query: 252 GAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSS-VKEKNVFTWNAV 310
+E G IH + R + + + LI +Y++C ++E +F + E ++ WN++
Sbjct: 430 RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSM 489
Query: 311 IKGLALAKSGEEAIRLFNRMEQDGVRA-DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK 369
I G +A+ LF RM Q V +E + VLS+C+ + GRQ G +V K
Sbjct: 490 ISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVV--K 547
Query: 370 YGFIPNVKHYACMVDLLARSGSLREA 395
G++ + + D+ + G + A
Sbjct: 548 SGYVSDSFVETALTDMYCKCGEIDSA 573
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 84/209 (40%), Gaps = 65/209 (31%)
Query: 257 GAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA------- 309
G IH FI R G + D L L+D+Y +CG + +VF + ++V++WNA
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 310 ---------VIKGL-------------ALAKSG--EEAIRLFNRMEQDGVRADEVTLLAV 345
V G+ L + G E+A+ ++ RM DG TL +V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 346 LSACN-----------HSGLVDMG--RQIF------------GFLVEGKYGF-------I 373
LSAC+ H V G + IF GF+V+ YG
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD--YGVRVFESLSQ 202
Query: 374 PNVKHYACMVDLLARSGSLREAFEVMRCM 402
PN Y ++ LAR + EA ++ R M
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLM 231
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 204/389 (52%), Gaps = 5/389 (1%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V + SLI A+ + + F M + + PN TF +F + ++ +
Sbjct: 275 VVSWTSLIVAYKRIGQE---VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQ 331
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
+H +VL LG + V NS++ +Y+ L S LF M RD++SW+ +I G+ AG
Sbjct: 332 LHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVS-ASVLFQGMRCRDIISWSTIIGGYCQAG 390
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
++ F M+ +G P + + L+ + +E G +H G E + + +
Sbjct: 391 FGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRS 450
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
+LI+MY+KCG ++E +F ++ + A+I G A +EAI LF + + G R
Sbjct: 451 SLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRP 510
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D VT ++VL+AC HSG +D+G F + E Y P +HY CMVDLL R+G L +A +
Sbjct: 511 DSVTFISVLTACTHSGQLDLGFHYFNMMQE-TYNMRPAKEHYGCMVDLLCRAGRLSDAEK 569
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGR 457
++ M + +W +LL++ K++GD+E A +++EL+P + V L+N+Y+ G
Sbjct: 570 MINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGN 629
Query: 458 WDDVEKVRGMMKDRQLTKDLGCSSVEVEE 486
++ VR MK + + K+ G SS+++++
Sbjct: 630 LEEAANVRKNMKAKGVIKEPGWSSIKIKD 658
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 187/422 (44%), Gaps = 49/422 (11%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + + ++I H+ + LT F+ M R+ L + YTF K+ +
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLT---YFSEMSRSEELSDTYTFAIALKACAGLRQV 225
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLF-SLCRQLFDEMTHRDVVSWTVMIM 211
+++H HV+ G + + V NSL +Y + LC LF+ M+ RDVVSWT +I+
Sbjct: 226 KYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLC--LFENMSERDVVSWTSLIV 283
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
++ G+ A+ F +M+ + V PN T + +ACA + G +H + G
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+ + +++ MY+ CG + +F ++ +++ +W+ +I G A GEE + F+ M
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
Q G + + L ++LS + +++ GRQ+ + +G N + ++++ ++ GS
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALAL--CFGLEQNSTVRSSLINMYSKCGS 461
Query: 392 LREA----------------------------------FEVMRCMPFDPTKAMWGSLLVS 417
++EA FE + F P + S+L +
Sbjct: 462 IKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTA 521
Query: 418 SKSQG--DLEFSEF-VARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLT 474
G DL F F + ++ + PA +Y + +L GR D EK M+ +
Sbjct: 522 CTHSGQLDLGFHYFNMMQETYNMRPAKE-HYGCMVDLLCRAGRLSDAEK---MINEMSWK 577
Query: 475 KD 476
KD
Sbjct: 578 KD 579
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 157/316 (49%), Gaps = 15/316 (4%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMH--RNTILPNHYTFPFLFKSLSAPC 150
+P + + S+I+ + ++ NS L +F+ M + + P+ + K+
Sbjct: 66 MPHGDIVSWTSIIKRYVTAN---NSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSS 122
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ A +S+HA+ +K L +YV +SLL +Y ++ CR +F EM R+ V+WT +I
Sbjct: 123 NIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCR-VFSEMPFRNAVTWTAII 181
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G +AG++ + L F +M + + T AL ACA V+ G IH + G+
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV 241
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEE--AIRLFN 328
+ + +L MY +CG +++G+ +F ++ E++V +W ++I +A + G+E A+ F
Sbjct: 242 TTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI--VAYKRIGQEVKAVETFI 299
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
+M V +E T ++ SAC + G Q+ ++ G ++ M+ + +
Sbjct: 300 KMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLS--LGLNDSLSVSNSMMKMYST 357
Query: 389 SGSLREA---FEVMRC 401
G+L A F+ MRC
Sbjct: 358 CGNLVSASVLFQGMRC 373
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 5/233 (2%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYA--GVAPNRVTMVNALAACA 249
RQ+FD+M H D+VSWT +I + A D+AL+ F M+ V+P+ + L AC
Sbjct: 60 RQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACG 119
Query: 250 DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA 309
S + G +H + + V +G++L+DMY + G++++ RVFS + +N TW A
Sbjct: 120 QSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTA 179
Query: 310 VIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK 369
+I GL A +E + F+ M + +D T L AC V G+ I ++
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVI--V 237
Query: 370 YGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
GF+ + + + G +++ + M + W SL+V+ K G
Sbjct: 238 RGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIG 289
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 205/372 (55%), Gaps = 7/372 (1%)
Query: 116 NSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHN 175
N +SIF +M + + PN TF L ++ + +H +K G + + V N
Sbjct: 352 NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN 411
Query: 176 SLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA 235
S + +YA L ++ F+++T R+++SW MI GF G +AL F A
Sbjct: 412 SFITLYAKFEALED-AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA-AETM 469
Query: 236 PNRVT---MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEG 292
PN T ++NA+A D +V+ G H + + G V+ +AL+DMYAK G ++E
Sbjct: 470 PNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES 528
Query: 293 VRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHS 352
+VF+ + +KN F W ++I + E + LF++M ++ V D VT L+VL+ACN
Sbjct: 529 EKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK 588
Query: 353 GLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWG 412
G+VD G +IF ++E Y P+ +HY+CMVD+L R+G L+EA E+M +P P ++M
Sbjct: 589 GMVDKGYEIFNMMIE-VYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQ 647
Query: 413 SLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQ 472
S+L S + G+++ VA +E++P S YV + N+YAE WD ++R M+ +
Sbjct: 648 SMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKN 707
Query: 473 LTKDLGCSSVEV 484
++K+ G S ++V
Sbjct: 708 VSKEAGFSWIDV 719
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 174/376 (46%), Gaps = 15/376 (3%)
Query: 52 QIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSHS 111
Q+Q+ ++ L+S+ + + FIT+ S + + +NSL+ S
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITM-YSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQE 253
Query: 112 HHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDI 171
+ IF M R + +H +F + + A+ +H +K G+ +
Sbjct: 254 GTF--GFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 311
Query: 172 YVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQY 231
V N L+ Y+ L ++ + +F +M+ R+VVSWT MI + DDA+ F M++
Sbjct: 312 EVGNILMSRYSKCGVLEAV-KSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRF 365
Query: 232 AGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEE 291
GV PN VT V + A + ++ G IH + G+ + +G + I +YAK +E+
Sbjct: 366 DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALED 425
Query: 292 GVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNH 351
+ F + + + +WNA+I G A EA+++F + + +E T +VL+A
Sbjct: 426 AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAF 484
Query: 352 SG--LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA 409
+ V G++ L++ P V + ++D+ A+ G++ E+ +V M +
Sbjct: 485 AEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMS-QKNQF 541
Query: 410 MWGSLLVSSKSQGDLE 425
+W S++ + S GD E
Sbjct: 542 VWTSIISAYSSHGDFE 557
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 13/218 (5%)
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRL-FSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
+H G + V N+++G+Y + R +LC +F+ + DVVSW ++ GF
Sbjct: 98 IHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALC--IFENLVDPDVVSWNTILSGF--- 152
Query: 217 GKFDDALLAFE---QMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
DD +A +M+ AGV + T AL+ C S +G + + + G E D+
Sbjct: 153 ---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDL 209
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKS-GEEAIRLFNRMEQ 332
V+G + I MY++ G RVF + K++ +WN+++ GL+ + G EA+ +F M +
Sbjct: 210 VVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMR 269
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKY 370
+GV D V+ +V++ C H + + RQI G ++ Y
Sbjct: 270 EGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY 307
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 206/395 (52%), Gaps = 10/395 (2%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
+V + ++I F + ++ +F+ M R + PN +T+ + +L
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAV---DLFSEMKRKGVRPNEFTYSVILTALPV----ISPS 413
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
VHA V+K + V +LL Y ++ + +F + +D+V+W+ M+ G+
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK-VFSGIDDKDIVAWSAMLAGYAQT 472
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGA-VEMGAWIHDFIRRNGWELDVVL 275
G+ + A+ F ++ G+ PN T + L CA + A + G H F ++ + + +
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
+AL+ MYAK G +E VF +EK++ +WN++I G A +A+ +F M++ V
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+ D VT + V +AC H+GLV+ G + F +V P +H +CMVDL +R+G L +A
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR-DCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Query: 396 FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEM 455
+V+ MP +W ++L + + E A K++ ++P +SA YV LSN+YAE
Sbjct: 652 MKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAES 711
Query: 456 GRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
G W + KVR +M +R + K+ G S +EV+ + ++
Sbjct: 712 GDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYS 746
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 3/251 (1%)
Query: 123 IFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYA 182
+F ++HR + + F + K + C + +H +K G L D+ V SL+ Y
Sbjct: 80 LFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYM 139
Query: 183 ASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
F R++FDEM R+VV+WT +I G+ D+ L F +MQ G PN T
Sbjct: 140 KGSN-FKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK 302
AL A+ G G +H + +NG + + + +LI++Y KCG V + +F + K
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 258
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
+V TWN++I G A EA+ +F M + VR E + +V+ C + + Q+
Sbjct: 259 SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLH 318
Query: 363 GFLVEGKYGFI 373
+V KYGF+
Sbjct: 319 CSVV--KYGFL 327
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 146/330 (44%), Gaps = 12/330 (3%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
+V + +LI ++ + + LT +F M PN +TF L+ +
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLT---LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
VH V+K G I V NSL+ +Y + R LFD+ + VV+W MI G+
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK-ARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
G +AL F M+ V + + + + CA+ + +H + + G+ D +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 277 TALIDMYAKCGRVEEGVRVFSSVK-EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
TAL+ Y+KC + + +R+F + NV +W A+I G EEA+ LF+ M++ GV
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
R +E T +L+A V ++ +V+ Y V ++D + G + EA
Sbjct: 394 RPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEA 447
Query: 396 FEVMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
+V + D W ++L G+ E
Sbjct: 448 AKVFSGID-DKDIVAWSAMLAGYAQTGETE 476
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 136/305 (44%), Gaps = 24/305 (7%)
Query: 183 ASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
+S RL++ LFD+ RD S+ ++ GF G+ +A F + G+ +
Sbjct: 39 SSSRLYN-AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK 302
+ L A G +H + G+ DV +GT+L+D Y K ++G +VF +KE+
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
NV TW +I G A +E + LF RM+ +G + + T A L G+ G Q+
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTK----AMWGSLLVSS 418
+V K G + +++L + G++R+A + FD T+ W S++
Sbjct: 218 TVVV--KNGLDKTIPVSNSLINLYLKCGNVRKAR-----ILFDKTEVKSVVTWNSMISGY 270
Query: 419 KSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLG 478
+ G ++LE Y + L+ + + V K+ +K+ + T+ L
Sbjct: 271 AANG------------LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLH 318
Query: 479 CSSVE 483
CS V+
Sbjct: 319 CSVVK 323
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 175/295 (59%), Gaps = 5/295 (1%)
Query: 190 LCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAAC 248
L +++ + ++V++W +MI G+ ++++AL A + M + + PN+ + ++LAAC
Sbjct: 116 LAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAAC 175
Query: 249 ADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWN 308
A G + W+H + +G EL+ +L +AL+D+YAKCG + VF SVK +V WN
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 309 AVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEG 368
A+I G A EAIR+F+ ME + V D +T L +L+ C+H GL++ G++ FG L+
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG-LMSR 294
Query: 369 KYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSE 428
++ P ++HY MVDLL R+G ++EA+E++ MP +P +W SLL SS++ + E E
Sbjct: 295 RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGE 354
Query: 429 FVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
+ L A S YV LSN+Y+ +W+ +KVR +M + K G S +E
Sbjct: 355 IAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLE 406
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 214/395 (54%), Gaps = 12/395 (3%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNT-ILPNHYTFPFLFKSLSAPCHFAQ 154
P+V + S+I ++ N+L S+F MH + + PN YTF +FK+ SA
Sbjct: 93 PNVVSWTSVISGYNDMGKPQNAL---SMFQKMHEDRPVPPNEYTFASVFKACSALAESRI 149
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTH--RDVVSWTVMIMG 212
+++HA + G +I V +SL+ +Y + R++FD M R+VVSWT MI
Sbjct: 150 GKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV-ETARRVFDSMIGYGRNVVSWTSMITA 208
Query: 213 FRNAGKFDDALLAFEQMQYAGVA--PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
+ + +A+ F A + N+ + + ++AC+ G ++ G H + R G+E
Sbjct: 209 YAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYE 268
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
+ V+ T+L+DMYAKCG + ++F ++ +V ++ ++I A GE A++LF+ M
Sbjct: 269 SNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM 328
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
+ + VTLL VL AC+HSGLV+ G + + E KYG +P+ +HY C+VD+L R G
Sbjct: 329 VAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAE-KYGVVPDSRHYTCVVDMLGRFG 387
Query: 391 SLREAFEVMRCMPFDPTKA--MWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHL 448
+ EA+E+ + + + +WG+LL + + G +E +++L++ ++ Y+ L
Sbjct: 388 RVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIAL 447
Query: 449 SNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
SN YA G W+D E +R MK K+ CS +E
Sbjct: 448 SNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIE 482
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 12/288 (4%)
Query: 122 SIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVY 181
S+F ++N + T FL LS + A +H LKLG D + N L+ Y
Sbjct: 16 SLFVPQYKNDFF-HLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISY 74
Query: 182 AASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM-QYAGVAPNRVT 240
+ + R+LFDEM +VVSWT +I G+ + GK +AL F++M + V PN T
Sbjct: 75 VKLKEI-NTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYT 133
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV- 299
+ AC+ +G IH + +G ++V+ ++L+DMY KC VE RVF S+
Sbjct: 134 FASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMI 193
Query: 300 -KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ--DGVRADEVTLLAVLSACNHSGLVD 356
+NV +W ++I A G EAI LF RA++ L +V+SAC+ G +
Sbjct: 194 GYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQ 253
Query: 357 MGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL---REAFEVMRC 401
G+ G + G G+ N ++D+ A+ GSL + F +RC
Sbjct: 254 WGKVAHGLVTRG--GYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC 299
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 202/373 (54%), Gaps = 8/373 (2%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L +F M + PN T + ++ +A Q + H ++ G ++ V +L+ +
Sbjct: 249 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 181 YAA--SPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAG-VAPN 237
Y SP +F + +DVVSW +I GF G ++ F M P+
Sbjct: 309 YMKCFSPEE---AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS 297
+ MV L +C++ G +E H ++ + G++ + +G +L+++Y++CG + +VF+
Sbjct: 366 AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425
Query: 298 SVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM-EQDGVRADEVTLLAVLSACNHSGLVD 356
+ K+ W ++I G + G +A+ FN M + V+ +EVT L++LSAC+H+GL+
Sbjct: 426 GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIH 485
Query: 357 MGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLV 416
G +IF +V Y PN++HYA +VDLL R G L A E+ + MPF PT + G+LL
Sbjct: 486 EGLRIFKLMV-NDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLG 544
Query: 417 SSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKD 476
+ + + E +E VA+KL ELE ++ YY+ +SN+Y G W++VEK+R +K R + K
Sbjct: 545 ACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKG 604
Query: 477 LGCSSVEVEEQGH 489
L S +E+ + H
Sbjct: 605 LAESLIEIRRKVH 617
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 162/332 (48%), Gaps = 9/332 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHM-HRNTILPNHYTFPFLFKSLSAPCH 151
+ +P + ++S++ F + + ++ F M + + P+ T L + + +
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAV---EFFRRMVMASDVTPDRVTLITLVSACTKLSN 178
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
+ VH V++ G +D+ + NSLL YA S R F LF + +DV+SW+ +I
Sbjct: 179 SRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKS-RAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ G +ALL F M G PN T++ L ACA + +E G H+ R G E
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM- 330
+V + TAL+DMY KC EE VFS + K+V +W A+I G L +I F+ M
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIML 357
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
++ R D + ++ VL +C+ G ++ + +++ KYGF N A +V+L +R G
Sbjct: 358 LENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVI--KYGFDSNPFIGASLVELYSRCG 415
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
SL A +V + T +W SL+ G
Sbjct: 416 SLGNASKVFNGIALKDT-VVWTSLITGYGIHG 446
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 153/308 (49%), Gaps = 8/308 (2%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
++ +N+L+++ S L F+HM R+ P+++T P K+ +
Sbjct: 25 LYQWNTLLKSLSREKQWEEVLYH---FSHMFRDEEKPDNFTLPVALKACGELREVNYGEM 81
Query: 158 VHAHVLKLGHL-HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
+H V K L D+YV +SL+ +Y R+ R +FDE+ D+V+W+ M+ GF
Sbjct: 82 IHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALR-MFDELEKPDIVTWSSMVSGFEKN 140
Query: 217 GKFDDALLAFEQMQYAG-VAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
G A+ F +M A V P+RVT++ ++AC +G +H F+ R G+ D+ L
Sbjct: 141 GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 200
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
+L++ YAK +E V +F + EK+V +W+ VI + EA+ +FN M DG
Sbjct: 201 VNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT 260
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+ T+L VL AC + ++ GR+ + + G VK +VD+ + S EA
Sbjct: 261 EPNVATVLCVLQACAAAHDLEQGRKTHELAI--RKGLETEVKVSTALVDMYMKCFSPEEA 318
Query: 396 FEVMRCMP 403
+ V +P
Sbjct: 319 YAVFSRIP 326
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADS 251
RQ+F EMT R + W ++ ++++ L F M P+ T+ AL AC +
Sbjct: 14 RQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGEL 73
Query: 252 GAVEMGAWIHDFIRRN-GWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAV 310
V G IH F++++ D+ +G++LI MY KCGR+ E +R+F +++ ++ TW+++
Sbjct: 74 REVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSM 133
Query: 311 IKGLALAKSGEEAIRLFNRM-EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK 369
+ G S +A+ F RM V D VTL+ ++SAC +GR + GF++ +
Sbjct: 134 VSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI--R 191
Query: 370 YGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
GF ++ +++ A+S + +EA + +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK 222
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 193/356 (54%), Gaps = 2/356 (0%)
Query: 134 PNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQ 193
PN +T + +A + + +H H+++ G D + +SL+ +Y R
Sbjct: 216 PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG-CIDEARN 274
Query: 194 LFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGA 253
+FD++ +DVVSWT MI + + ++ + F ++ + PN T L ACAD
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 254 VEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKG 313
E+G +H ++ R G++ ++L+DMY KCG +E V + ++ +W ++I G
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 314 LALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFI 373
A +EA++ F+ + + G + D VT + VLSAC H+GLV+ G + F + E K+
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITE-KHRLS 453
Query: 374 PNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARK 433
HY C+VDLLARSG + V+ MP P+K +W S+L + G+++ +E A++
Sbjct: 454 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQE 513
Query: 434 LVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
L ++EP N YV ++N+YA G+W++ K+R M++ +TK G S E++ + H
Sbjct: 514 LFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRH 569
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 143/320 (44%), Gaps = 34/320 (10%)
Query: 134 PNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLF----- 188
P T+ L + S + + VH H+ G + I + N LL +YA L
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 189 -------SLC------------------RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDAL 223
LC R+LFDEMT +D SWT M+ G+ + ++AL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 224 LAFEQMQYA-GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDM 282
+ + MQ PN T+ A+AA A + G IH I R G + D VL ++L+DM
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 283 YAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTL 342
Y KCG ++E +F + EK+V +W ++I + E LF+ + R +E T
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 343 LAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
VL+AC ++G+Q+ G++ + GF P + +VD+ + G++ A V+
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMT--RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC 380
Query: 403 PFDPTKAMWGSLLVSSKSQG 422
P P W SL+ G
Sbjct: 381 P-KPDLVSWTSLIGGCAQNG 399
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
H++ KL LH + +L +A+ R ++ F+ H D V++ A +
Sbjct: 3 HSNARKLTTLHGFILKRNLSSFHASLKRFSD--KKFFNP-NHED---GGVVVERLCRANR 56
Query: 219 FDDAL-------LAFEQMQYAGVA--PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
F +A+ L E +Q G A P T N + C+ + A+E G +H+ IR +G+
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF 116
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
+V+ L+ MYAKCG + + +VF + +++ +WN ++ G A EEA +LF+
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 330 M-EQD 333
M E+D
Sbjct: 177 MTEKD 181
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 222/415 (53%), Gaps = 25/415 (6%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
R +N++I A + + +L +F M R+ I P+ +TF + K+ +
Sbjct: 445 RRDAVSWNAIIAAHEQNGKGYETLF---LFVSMLRSRIEPDEFTFGSILKACTGG-SLGY 500
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAAS----------PRLF-----SLCRQLFDEMT 199
+H+ ++K G + V SL+ +Y+ R F S + ++M
Sbjct: 501 GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMH 560
Query: 200 HRDV----VSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVE 255
++ + VSW +I G+ + +DA + F +M G+ P++ T L CA+ +
Sbjct: 561 NKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAG 620
Query: 256 MGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLA 315
+G IH + + + DV + + L+DMY+KCG + + +F ++ TWNA+I G A
Sbjct: 621 LGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 680
Query: 316 LAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPN 375
GEEAI+LF RM + ++ + VT +++L AC H GL+D G + F ++++ YG P
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYF-YMMKRDYGLDPQ 739
Query: 376 VKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLL-VSSKSQGDLEFSEFVARKL 434
+ HY+ MVD+L +SG ++ A E++R MPF+ +W +LL V + + ++E +E L
Sbjct: 740 LPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAAL 799
Query: 435 VELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+ L+P +S+ Y LSN+YA+ G W+ V +R M+ +L K+ GCS VE++++ H
Sbjct: 800 LRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELH 854
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 156/334 (46%), Gaps = 15/334 (4%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V +NS++ + + SL + +F M R I + TF + K S
Sbjct: 140 MPVRDVVSWNSMLSGY---LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDT 196
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H V+++G D+ ++LL +YA R R +F + ++ VSW+ +I G
Sbjct: 197 SLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR-VFQGIPEKNSVSWSAIIAG 255
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
AL F++MQ ++ + L +CA + +G +H ++ + D
Sbjct: 256 CVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAAD 315
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
++ TA +DMYAKC +++ +F + + N ++NA+I G + + G +A+ LF+R+
Sbjct: 316 GIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMS 375
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
G+ DE++L V AC + G QI+G ++ V + A +D+ + +L
Sbjct: 376 SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQAL 433
Query: 393 REAFEVMRCMPFDPTK----AMWGSLLVSSKSQG 422
EAF V FD + W +++ + + G
Sbjct: 434 AEAFRV-----FDEMRRRDAVSWNAIIAAHEQNG 462
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 6/286 (2%)
Query: 115 HNSLTPLSI--FAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIY 172
N+L L++ F M + + + + +S +A +HAH LK D
Sbjct: 258 QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 317
Query: 173 VHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYA 232
V + L +YA + + LFD + + S+ MI G+ ALL F ++ +
Sbjct: 318 VRTATLDMYAKCDNMQD-AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 376
Query: 233 GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEG 292
G+ + +++ ACA + G I+ ++ LDV + A IDMY KC + E
Sbjct: 377 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 436
Query: 293 VRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHS 352
RVF ++ ++ +WNA+I G E + LF M + + DE T ++L AC
Sbjct: 437 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-G 495
Query: 353 GLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
G + G +I +V K G N ++D+ ++ G + EA ++
Sbjct: 496 GSLGYGMEIHSSIV--KSGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 34/289 (11%)
Query: 138 TFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDE 197
F F+FK + + HAH++ G +V N LL VY S R F +FD+
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNS-RDFVSASMVFDK 108
Query: 198 MTHRDVVSWTVMIMGFRNA-------------------------------GKFDDALLAF 226
M RDVVSW MI G+ + G+ ++ F
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 227 EQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKC 286
M G+ + T L C+ +G IH + R G + DVV +AL+DMYAK
Sbjct: 169 VDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 287 GRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVL 346
R E +RVF + EKN +W+A+I G A++ F M++ + +VL
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 347 SACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+C + +G Q+ ++ + V+ +D+ A+ ++++A
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVR--TATLDMYAKCDNMQDA 335
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 206/398 (51%), Gaps = 7/398 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
V V + +LI +S ++ F M + PN YT+ + S
Sbjct: 227 VEEKDVVLITALIVGYSQKGEDTEAVKA---FQSMLVEKVQPNEYTYASVLISCGNLKDI 283
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H ++K G + SLL +Y L ++F + + + VSWT +I G
Sbjct: 284 GNGKLIHGLMVKSGFESALASQTSLLTMYLRCS-LVDDSLRVFKCIEYPNQVSWTSLISG 342
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
G+ + AL+ F +M + PN T+ +AL C++ E G IH + + G++ D
Sbjct: 343 LVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRD 402
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
G+ LID+Y KCG + VF ++ E +V + N +I A G EA+ LF RM
Sbjct: 403 KYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMIN 462
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
G++ ++VT+L+VL ACN+S LV+ G ++F + K + HYACMVDLL R+G L
Sbjct: 463 LGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTND--HYACMVDLLGRAGRL 520
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
EA E++ +P +W +LL + K +E +E + RK++E+EP + + +SNLY
Sbjct: 521 EEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLY 579
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
A G+W+ V +++ MKD +L K+ S VE+ ++ HT
Sbjct: 580 ASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHT 617
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 153/298 (51%), Gaps = 13/298 (4%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
H+ +NSLI ++ H S + ++ M N +LP+ YT +FK+ S +AQ
Sbjct: 129 HIVTWNSLI---AYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 157 SVHAHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQ---LFDEMTHRDVVSWTVMIMG 212
H + LG + +++V ++L+ +Y F R+ + D + +DVV T +I+G
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVK----FGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G+ +A+ AF+ M V PN T + L +C + + G IH + ++G+E
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ T+L+ MY +C V++ +RVF ++ N +W ++I GL E A+ F +M +
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
D ++ + TL + L C++ + + GRQI G + KYGF + + ++DL + G
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT--KYGFDRDKYAGSGLIDLYGKCG 417
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 135/304 (44%), Gaps = 6/304 (1%)
Query: 133 LPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCR 192
L + F L + + +++ AH+LK G +I S L + R
Sbjct: 62 LTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI--SGSKLVDASLKCGDIDYAR 119
Query: 193 QLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSG 252
Q+FD M+ R +V+W +I + +A+ + M V P+ T+ + A +D
Sbjct: 120 QVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLS 179
Query: 253 AVEMGAWIHDFIRRNGWEL-DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVI 311
+ H G E+ +V +G+AL+DMY K G+ E V V+EK+V A+I
Sbjct: 180 LEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALI 239
Query: 312 KGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG 371
G + EA++ F M + V+ +E T +VL +C + + G+ I G +V K G
Sbjct: 240 VGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMV--KSG 297
Query: 372 FIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVA 431
F + ++ + R + ++ V +C+ + P + W SL+ G E +
Sbjct: 298 FESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGREEMALIEF 356
Query: 432 RKLV 435
RK++
Sbjct: 357 RKMM 360
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 190/330 (57%), Gaps = 2/330 (0%)
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VH ++K G + +++V +SL+ +Y+ L + ++F M+ ++V+W MI +
Sbjct: 498 VHGSMIKTGLVLNVFVGSSLIDLYSKCG-LPEMALKVFTSMSTENMVAWNSMISCYSRNN 556
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
+ ++ F M G+ P+ V++ + L A + + ++ G +H + R G D L
Sbjct: 557 LPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKN 616
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
ALIDMY KCG + +F ++ K++ TWN +I G A+ LF+ M++ G
Sbjct: 617 ALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESP 676
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D+VT L+++SACNHSG V+ G+ IF F+ + YG PN++HYA MVDLL R+G L EA+
Sbjct: 677 DDVTFLSLISACNHSGFVEEGKNIFEFMKQ-DYGIEPNMEHYANMVDLLGRAGLLEEAYS 735
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGR 457
++ MP + ++W LL +S++ ++E A KL+ +EP + YV L NLY E G
Sbjct: 736 FIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGL 795
Query: 458 WDDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
++ K+ G+MK++ L K GCS +EV ++
Sbjct: 796 KNEAAKLLGLMKEKGLHKQPGCSWIEVSDR 825
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 182/379 (48%), Gaps = 18/379 (4%)
Query: 51 QQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSH 110
+QI ++ L ++P + +++ S V + I+N+++ A++
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSM-YSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE 350
Query: 111 SHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHD 170
+ + +++L +F M + ++LP+ +T + S + +SVHA + K
Sbjct: 351 NDYGYSAL---DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQST 407
Query: 171 IYVHNSLLGVYA---ASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFE 227
+ ++LL +Y+ P + +F M +D+V+W +I G GKF +AL F
Sbjct: 408 STIESALLTLYSKCGCDPDAY----LVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463
Query: 228 QMQYA--GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAK 285
M+ + P+ M + ACA A+ G +H + + G L+V +G++LID+Y+K
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSK 523
Query: 286 CGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAV 345
CG E ++VF+S+ +N+ WN++I + E +I LFN M G+ D V++ +V
Sbjct: 524 CGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSV 583
Query: 346 LSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA-CMVDLLARSGSLREAFEVMRCMPF 404
L A + + + G+ + G+ + + G IP+ H ++D+ + G + A + + M
Sbjct: 584 LVAISSTASLLKGKSLHGYTL--RLG-IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ- 639
Query: 405 DPTKAMWGSLLVSSKSQGD 423
+ W ++ S GD
Sbjct: 640 HKSLITWNLMIYGYGSHGD 658
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 156/338 (46%), Gaps = 21/338 (6%)
Query: 102 NSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAH 161
NS IRA + +L S H + + +TFP L K+ SA + + +++H
Sbjct: 28 NSGIRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 162 VLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTH-------RDVVSWTVMIMGFR 214
V+ LG +D ++ SL+ +Y L Q+FD + RDV W MI G+
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFL-DYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAV--EMGAWIHDFIRRNGWELD 272
+F + + F +M GV P+ ++ ++ G E G IH F+ RN + D
Sbjct: 145 KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTD 204
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEK-NVFTWNAVIKGLALAKSGEEAIRLFNRME 331
L TALIDMY K G + RVF +++K NV WN +I G + E ++ L+ +
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAK 264
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC--MVDLLARS 389
+ V+ + L AC+ S GRQI +V+ P Y C ++ + ++
Sbjct: 265 NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP----YVCTSLLSMYSKC 320
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS 427
G + EA V C+ D +W + +V++ ++ D +S
Sbjct: 321 GMVGEAETVFSCV-VDKRLEIWNA-MVAAYAENDYGYS 356
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 141/325 (43%), Gaps = 8/325 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
V V ++NS+I + + F M + P+ ++ + + +F
Sbjct: 128 VSARDVTVWNSMIDGYFKFRRFKEGV---GCFRRMLVFGVRPDAFSLSIVVSVMCKEGNF 184
Query: 153 --AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ + +H +L+ D ++ +L+ +Y R + +VV W VMI
Sbjct: 185 RREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
+GF +G + +L + + V + AL AC+ S G IH + + G
Sbjct: 245 VGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
D + T+L+ MY+KCG V E VFS V +K + WNA++ A G A+ LF M
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
Q V D TL V+S C+ GL + G+ + L + ++ + ++ L ++ G
Sbjct: 365 RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLYSKCG 422
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLL 415
+A+ V + M + WGSL+
Sbjct: 423 CDPDAYLVFKSME-EKDMVAWGSLI 446
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 205/400 (51%), Gaps = 9/400 (2%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
R ++N+L+ +S ++L +F+ M + + +T + + +
Sbjct: 224 RDDSVLWNALVNGYSQIFRFEDALL---VFSKMREEGVGVSRHTITSVLSAFTVSGDIDN 280
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+S+H +K G DI V N+L+ +Y S + +F+ M RD+ +W ++
Sbjct: 281 GRSIHGLAVKTGSGSDIVVSNALIDMYGKS-KWLEEANSIFEAMDERDLFTWNSVLCVHD 339
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW----E 270
G D L FE+M +G+ P+ VT+ L C ++ G IH ++ +G
Sbjct: 340 YCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKS 399
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
+ + +L+DMY KCG + + VF S++ K+ +WN +I G + GE A+ +F+ M
Sbjct: 400 SNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCM 459
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
+ GV+ DE+T + +L AC+HSG ++ GR + E Y +P HYAC++D+L R+
Sbjct: 460 CRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQM-ETVYNILPTSDHYACVIDMLGRAD 518
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSN 450
L EA+E+ P +W S+L S + G+ + + ++L ELEP + YV +SN
Sbjct: 519 KLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSN 578
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
+Y E G++++V VR M+ + + K GCS + ++ HT
Sbjct: 579 VYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHT 618
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 161/316 (50%), Gaps = 25/316 (7%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
VF +N+LI F + + L + + M N ILP+ YTFP L K S + +
Sbjct: 126 VFGYNALISGFVV---NGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKK 181
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSL--CRQLFDEMTHRD-VVSWTVMIMGFR 214
VH KLG D YV + L+ Y+ + S+ +++FDE+ RD V W ++ G+
Sbjct: 182 VHGLAFKLGFDSDCYVGSGLVTSYS---KFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
+F+DALL F +M+ GV +R T+ + L+A SG ++ G IH + G D+V
Sbjct: 239 QIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIV 298
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+ ALIDMY K +EE +F ++ E+++FTWN+V+ + + LF RM G
Sbjct: 299 VSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG 358
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLV-------EGKYGFIPNVKHYACMVDLLA 387
+R D VTL VL C + GR+I G+++ + FI N ++D+
Sbjct: 359 IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHN-----SLMDMYV 413
Query: 388 RSGSLREA---FEVMR 400
+ G LR+A F+ MR
Sbjct: 414 KCGDLRDARMVFDSMR 429
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 16/278 (5%)
Query: 152 FAQAQSVHAHVLKLGHLHDI-YVHNSLLGVYAASPRLFSLCRQ--LFDEMTHRDVVSWTV 208
+ Q +H +++ G L D SL+ +YA L R+ L + RDV +
Sbjct: 76 YVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKC----GLMRRAVLVFGGSERDVFGYNA 131
Query: 209 MIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMG--AWIHDFIRR 266
+I GF G DA+ + +M+ G+ P++ T + L S A+E+ +H +
Sbjct: 132 LISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG---SDAMELSDVKKVHGLAFK 188
Query: 267 NGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK-NVFTWNAVIKGLALAKSGEEAIR 325
G++ D +G+ L+ Y+K VE+ +VF + ++ + WNA++ G + E+A+
Sbjct: 189 LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALL 248
Query: 326 LFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
+F++M ++GV T+ +VLSA SG +D GR I G V K G ++ ++D+
Sbjct: 249 VFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAV--KTGSGSDIVVSNALIDM 306
Query: 386 LARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGD 423
+S L EA + M + W S+L GD
Sbjct: 307 YGKSKWLEEANSIFEAMD-ERDLFTWNSVLCVHDYCGD 343
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
Query: 237 NRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV-LGTALIDMYAKCGRVEEGVRV 295
N T + L CA G IH F+ R G+ D GT+L++MYAKCG + V V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 296 FSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLV 355
F E++VF +NA+I G + S +A+ + M +G+ D+ T ++L + L
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 356 DMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLL 415
D+ +++ G K GF + + +V ++ S+ +A +V +P +W +L+
Sbjct: 178 DV-KKVHGLAF--KLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALV 234
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 183/314 (58%), Gaps = 5/314 (1%)
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
DI + S++ YA + S R LF+E DV +W+ +I+G+ G+ ++A F +
Sbjct: 236 RDIISYTSMIDGYAKGGDMVS-ARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 294
Query: 229 MQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFI--RRNGWELDVVLGTALIDMYAKC 286
M V P+ MV ++AC+ G E+ + ++ R N + V+ ALIDM AKC
Sbjct: 295 MCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-PALIDMNAKC 353
Query: 287 GRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVL 346
G ++ ++F + ++++ ++ ++++G+A+ G EAIRLF +M +G+ DEV +L
Sbjct: 354 GHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVIL 413
Query: 347 SACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDP 406
C S LV+ G + F L+ KY + + HY+C+V+LL+R+G L+EA+E+++ MPF+
Sbjct: 414 KVCGQSRLVEEGLRYFE-LMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 472
Query: 407 TKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRG 466
+ WGSLL G+ E +E VAR L ELEP ++ YV LSN+YA + RW DV +R
Sbjct: 473 HASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRD 532
Query: 467 MMKDRQLTKDLGCS 480
M + +TK G S
Sbjct: 533 KMNENGITKICGRS 546
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 171/369 (46%), Gaps = 19/369 (5%)
Query: 38 TLLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPH 97
TL K C S +H+ QI A++I L+ + + FI+ S VP P
Sbjct: 15 TLFK-LCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPG 73
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTIL-PNHYTFPFLFKSLSAPCHFAQAQ 156
+++N LI+ +S+ + +SI M R + P+ YTFP + K S
Sbjct: 74 TYLWNHLIKGYSNKFLFFET---VSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
SVH VL++G D+ V S + Y LFS R++F EM R+ VSWT +++ + +
Sbjct: 131 SVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFS-ARKVFGEMPERNAVSWTALVVAYVKS 189
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
G+ ++A F+ M + +V+ L D V + +R D++
Sbjct: 190 GELEEAKSMFDLMPERNLGSWN-ALVDGLVKSGD--LVNAKKLFDEMPKR-----DIISY 241
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
T++ID YAK G + +F + +V W+A+I G A EA ++F+ M V+
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA--CMVDLLARSGSLRE 394
DE ++ ++SAC+ G ++ ++ +L + F HY ++D+ A+ G +
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF---SSHYVVPALIDMNAKCGHMDR 358
Query: 395 AFEVMRCMP 403
A ++ MP
Sbjct: 359 AAKLFEEMP 367
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 157/353 (44%), Gaps = 42/353 (11%)
Query: 134 PNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQ 193
P+ + LFK + H Q +HA +++ G D + + + ++S S
Sbjct: 8 PSLLSLETLFKLCKSEIHLNQ---IHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSS 64
Query: 194 LFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA-PNRVTMVNALAACADSG 252
+F+ + W +I G+ N F + + +M G+A P+ T + C+++G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 253 AVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIK 312
V +G+ +H + R G++ DVV+GT+ +D Y KC + +VF + E+N +W A++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV- 183
Query: 313 GLALAKSG--EEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKY 370
+A KSG EEA +F+ M + + + + LVD G G LV K
Sbjct: 184 -VAYVKSGELEEAKSMFDLMPERNLGS-------------WNALVD-GLVKSGDLVNAKK 228
Query: 371 GF--IP--NVKHYACMVDLLARSG---SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGD 423
F +P ++ Y M+D A+ G S R+ FE R + W +L++ G
Sbjct: 229 LFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRA----WSALILGYAQNGQ 284
Query: 424 LE-----FSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDR 471
FSE A+ + + V L + ++MG ++ EKV + R
Sbjct: 285 PNEAFKVFSEMCAKNV----KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR 333
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 207/412 (50%), Gaps = 36/412 (8%)
Query: 103 SLIRAFSHSHHHHNSLTPLSIFAHMHRNTILP-NHYTFPFLFKSLSAPCHFAQAQSVHAH 161
SL + S + N L++F MH + LP + + F KS +A SVHAH
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAH 73
Query: 162 VLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDD 221
+K L + +V +LL +Y + S R+LFDE+ R+ V W MI + + GK +
Sbjct: 74 SVKSNFLSNPFVGCALLDMYGKCLSV-SHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 222 ALLAFEQM----------------------QYAGV-----------APNRVTMVNALAAC 248
A+ +E M Y + PN +T++ ++AC
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 249 ADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWN 308
+ GA + IH + RN E L + L++ Y +CG + VF S+++++V W+
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 309 AVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEG 368
++I AL E A++ F ME V D++ L VL AC+H+GL D F + +G
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM-QG 311
Query: 369 KYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSE 428
YG + HY+C+VD+L+R G EA++V++ MP PT WG+LL + ++ G++E +E
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAE 371
Query: 429 FVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCS 480
AR+L+ +EP N A YV L +Y +GR ++ E++R MK+ + G S
Sbjct: 372 IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 25/274 (9%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+ FN++I+ + S + + M PN T L + SA F
Sbjct: 144 PNESSFNAIIKGLVGTED--GSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLI 201
Query: 156 QSVHAHVLKLGHLHDIYVHNSLL-GVYAASPRLFSLC--RQLFDEMTHRDVVSWTVMIMG 212
+ +H++ + + I H L G+ A R S+ + +FD M RDVV+W+ +I
Sbjct: 202 KEIHSYAFR----NLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISA 257
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSG-AVEMGAWIHDFIRRNGWEL 271
+ G + AL F++M+ A V P+ + +N L AC+ +G A E + G
Sbjct: 258 YALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRA 317
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK-NVFTWNAVIKGLALAKSGEEAIRLFNRM 330
+ L+D+ ++ GR EE +V ++ EK TW A++ A R + +
Sbjct: 318 SKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLG----------ACRNYGEI 367
Query: 331 EQDGVRADEVTLLAVLSACNHSGL----VDMGRQ 360
E + A E+ ++ + N+ L + +GRQ
Sbjct: 368 ELAEIAARELLMVEPENPANYVLLGKIYMSVGRQ 401
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 39/278 (14%)
Query: 203 VVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVN-ALAACADSGAVEMGAWIH 261
++S T + + N G + AL F QM + P + + AL +CA + +G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 262 DFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTW-------------- 307
++ + + +G AL+DMY KC V ++F + ++N W
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 308 ------------------NAVIKGLALAKSGE-EAIRLFNRMEQDGVRADEVTLLAVLSA 348
NA+IKGL + G AI + +M + + + +TLLA++SA
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 349 CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTK 408
C+ G + ++I + P +K + +V+ R GS+ V M D
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLK--SGLVEAYGRCGSIVYVQLVFDSME-DRDV 248
Query: 409 AMWGSLLVSSKSQGDLE--FSEFVARKLVELEPANSAY 444
W SL+ + GD E F +L ++ P + A+
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAF 286
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 174/299 (58%), Gaps = 2/299 (0%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAG-VAPNRVTMVNALAACAD 250
+ LFD+M HRDVV++ M+ G+ +AL F M+ + P+ T+V L A A
Sbjct: 303 KTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQ 362
Query: 251 SGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAV 310
G + +H +I + L LG ALIDMY+KCG ++ + VF ++ K++ WNA+
Sbjct: 363 LGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAM 422
Query: 311 IKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKY 370
I GLA+ GE A + ++E+ ++ D++T + VL+AC+HSGLV G F L+ K+
Sbjct: 423 IGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFE-LMRRKH 481
Query: 371 GFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFV 430
P ++HY CMVD+L+RSGS+ A ++ MP +P +W + L + + E E V
Sbjct: 482 KIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELV 541
Query: 431 ARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
A+ L+ N + YV LSN+YA G W DV +VR MMK+R++ K GCS +E++ + H
Sbjct: 542 AKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVH 600
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 161/376 (42%), Gaps = 38/376 (10%)
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
F++N++I++ SH +L L + N + + ++ + K+ S +
Sbjct: 87 FLWNAVIKSHSHGKDPRQALLLLCLML---ENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
H + K G D+++ N L+G+Y L L RQ+FD M RD VS+ MI G+ G
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCL-GLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 219 FDDALLAFEQM------------QYAGVAPNRVTMVNALAACADSGAVEMGAW---IHDF 263
A F+ M +G A + A AD ++ +W I +
Sbjct: 203 IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGY 262
Query: 264 IRRNGWE-----------LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIK 312
++ E DVV +ID YAK G V +F + ++V +N+++
Sbjct: 263 VKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMA 322
Query: 313 GLALAKSGEEAIRLFNRMEQDG-VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG 371
G K EA+ +F+ ME++ + D+ TL+ VL A G + + ++VE +
Sbjct: 323 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQ-- 380
Query: 372 FIPNVKHYACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSE 428
F K ++D+ ++ GS++ A FE + D AM G L + G+ F
Sbjct: 381 FYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI--HGLGESAFDM 438
Query: 429 FVARKLVELEPANSAY 444
+ + + L+P + +
Sbjct: 439 LLQIERLSLKPDDITF 454
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 113/261 (43%), Gaps = 19/261 (7%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAAS--PRLFSLCRQLFDEM--------THRDV 203
+H ++K G + + + ++ +A+S P L R +F E D
Sbjct: 27 DVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDP 86
Query: 204 VSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDF 263
W +I + ALL M GV+ ++ ++ L AC+ G V+ G IH F
Sbjct: 87 FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGF 146
Query: 264 IRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEA 323
+++ G D+ L LI +Y KCG + ++F + +++ ++N++I G A
Sbjct: 147 LKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSA 206
Query: 324 IRLFNRMEQDGVRADEVTLLAVLSA-CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACM 382
LF+ M + + ++ +++S S VD+ ++F + E ++ + M
Sbjct: 207 RELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPE------KDLISWNSM 258
Query: 383 VDLLARSGSLREAFEVMRCMP 403
+D + G + +A + MP
Sbjct: 259 IDGYVKHGRIEDAKGLFDVMP 279
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 177/302 (58%), Gaps = 1/302 (0%)
Query: 188 FSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAA 247
S R++FD M RD +W MI + G +AL F QMQ GV P+ ++++ L+
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV 340
Query: 248 CADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTW 307
CA +++ G +H + R ++ DV + + L+ MY KCG + + VF K++ W
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMW 400
Query: 308 NAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVE 367
N++I G A GEEA+++F+ M G ++VTL+A+L+AC+++G ++ G +IF + E
Sbjct: 401 NSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESM-E 459
Query: 368 GKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS 427
K+ P V+HY+C VD+L R+G + +A E++ M P +WG+LL + K+ L+ +
Sbjct: 460 SKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519
Query: 428 EFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
E A+KL E EP N+ YV LS++ A +W DV VR M+ ++K GCS +EV ++
Sbjct: 520 EVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKK 579
Query: 488 GH 489
H
Sbjct: 580 VH 581
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 12/216 (5%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ---S 157
+ +I+A+ L L +FA M + + P +FP L LS A Q
Sbjct: 299 WRGMIKAYERKGFE---LEALDLFAQMQKQGVRP---SFPSLISILSVCATLASLQYGRQ 352
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VHAH+++ D+YV + L+ +Y L + +FD + +D++ W +I G+ + G
Sbjct: 353 VHAHLVRCQFDDDVYVASVLMTMYVKCGELVK-AKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL-G 276
++AL F +M +G PN+VT++ L AC+ +G +E G I + + V
Sbjct: 412 LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHY 471
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEK-NVFTWNAVI 311
+ +DM + G+V++ + + S+ K + W A++
Sbjct: 472 SCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 24/292 (8%)
Query: 135 NHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQL 194
N ++ +F L +A+ ++ + + D+ +++G R+ R +
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLY----DMMPVKDVVASTNMIGGLCREGRV-DEARLI 194
Query: 195 FDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAV 254
FDEM R+VV+WT MI G+R + D A FE M V+ + L SG +
Sbjct: 195 FDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRI 250
Query: 255 EMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGL 314
E + + V+ A+I + + G + + RVF +++++ TW +IK
Sbjct: 251 EDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAY 306
Query: 315 ALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIP 374
EA+ LF +M++ GVR +L+++LS C + GRQ+ LV + F
Sbjct: 307 ERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ--FDD 364
Query: 375 NVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA----MWGSLLVSSKSQG 422
+V + ++ + + G L +A V FD + MW S++ S G
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLV-----FDRFSSKDIIMWNSIISGYASHG 411
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 24/256 (9%)
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
++ N L+ Y + R+ R +F+ M R+VVSWT M+ G+ G +A F +
Sbjct: 77 RNVVSWNGLVSGYIKN-RMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 229 MQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGR 288
M N V+ D G ++ ++D + DVV T +I + GR
Sbjct: 136 MP----ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGR 187
Query: 289 VEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
V+E +F ++E+NV TW +I G + A +LF M + EV+ ++L
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE----KTEVSWTSMLLG 243
Query: 349 CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC--MVDLLARSGSLREAFEVMRCMPFDP 406
SG ++ + F + P AC M+ G + +A V M D
Sbjct: 244 YTLSGRIEDAEEFFEVM--------PMKPVIACNAMIVGFGEVGEISKARRVFDLME-DR 294
Query: 407 TKAMWGSLLVSSKSQG 422
A W ++ + + +G
Sbjct: 295 DNATWRGMIKAYERKG 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 106/276 (38%), Gaps = 61/276 (22%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADS 251
R+ FD + + + SW ++ G+ + G +A F++M
Sbjct: 37 RKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS--------------------- 75
Query: 252 GAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVI 311
E +VV L+ Y K + E VF + E+NV +W A++
Sbjct: 76 ------------------ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMV 117
Query: 312 KGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG 371
KG EA LF RM + +EV+ + G +D R+++ +
Sbjct: 118 KGYMQEGMVGEAESLFWRMPE----RNEVSWTVMFGGLIDDGRIDKARKLYDMMP----- 168
Query: 372 FIPNVKHYACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSE 428
+ +V M+ L R G + EA F+ MR + W +++ + ++
Sbjct: 169 -VKDVVASTNMIGGLCREGRVDEARLIFDEMR----ERNVVTWTTMITGYRQNNRVD--- 220
Query: 429 FVARKLVELEPANSAY-YVHLSNLYAEMGRWDDVEK 463
VARKL E+ P + + + Y GR +D E+
Sbjct: 221 -VARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEE 255
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 232/455 (50%), Gaps = 11/455 (2%)
Query: 37 VTLLKD--FCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVP 94
+TLL D FC+ ++Q+ A+++ LQ TI + I+
Sbjct: 210 LTLLDDPMFCN---LLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+ +NS+I FS H + +F M R+ + + YT+ L + S H
Sbjct: 267 SKDLISWNSMIAGFSK---HELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIF 323
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPR-LFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+S+H V+K G N+L+ +Y P LF+ + +D++SW +I GF
Sbjct: 324 GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGF 383
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
G +DA+ F ++ + + + L +C+D +++G IH ++G+ +
Sbjct: 384 AQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNE 443
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEK-NVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ ++LI MY+KCG +E + F + K + WNA+I G A G+ ++ LF++M
Sbjct: 444 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN 503
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
V+ D VT A+L+AC+H+GL+ G ++ L+E Y P ++HYA VDLL R+G +
Sbjct: 504 QNVKLDHVTFTAILTACSHTGLIQEGLELLN-LMEPVYKIQPRMEHYAAAVDLLGRAGLV 562
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
+A E++ MP +P + + L ++ G++E + VA L+E+EP + YV LS++Y
Sbjct: 563 NKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMY 622
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
+++ +W++ V+ MMK+R + K G S +E+ Q
Sbjct: 623 SDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQ 657
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 5/279 (1%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
F + H + +K G + DIYV N +L Y L LFDEM RD VSW MI
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFL-GYANMLFDEMPKRDSVSWNTMIS 74
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G+ + GK +DA F M+ +G + + L A ++G +H + + G+E
Sbjct: 75 GYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC 134
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+V +G++L+DMYAKC RVE+ F + E N +WNA+I G + + A L ME
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 332 -QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
+ V D T +L+ + ++ +Q+ ++ K G + M+ A G
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVL--KLGLQHEITICNAMISSYADCG 252
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEF 429
S+ +A V + W S +++ S+ +L+ S F
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNS-MIAGFSKHELKESAF 290
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 8/278 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P+ +N++I ++ ++ +F M R+ + Y+F L K +++ F
Sbjct: 61 MPKRDSVSWNTMISGYTSCGKLEDAWC---LFTCMKRSGSDVDGYSFSRLLKGIASVKRF 117
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ VH V+K G+ ++YV +SL+ +YA R+ + F E++ + VSW +I G
Sbjct: 118 DLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVED-AFEAFKEISEPNSVSWNALIAG 176
Query: 213 FRNAGKFDDA--LLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
F A LL +M+ A V + T L D + +H + + G +
Sbjct: 177 FVQVRDIKTAFWLLGLMEMK-AAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQ 235
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSV-KEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
++ + A+I YA CG V + RVF + K++ +WN++I G + + E A LF +
Sbjct: 236 HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQ 295
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVE 367
M++ V D T +LSAC+ G+ + G +++
Sbjct: 296 MQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK 333
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 199/336 (59%), Gaps = 2/336 (0%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+ +++H + ++ G L + + +L+ +Y +L S +FD M ++V+SW +I +
Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS-AEVIFDRMAEKNVISWNSIIAAY 406
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
GK AL F+++ + + P+ T+ + L A A+S ++ G IH +I ++ + +
Sbjct: 407 VQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNT 466
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
++ +L+ MYA CG +E+ + F+ + K+V +WN++I A+ G ++ LF+ M
Sbjct: 467 IILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS 526
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
V ++ T ++L+AC+ SG+VD G + F + + +YG P ++HY CM+DL+ R+G+
Sbjct: 527 RVNPNKSTFASLLAACSISGMVDEGWEYFESM-KREYGIDPGIEHYGCMLDLIGRTGNFS 585
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYA 453
A + MPF PT +WGSLL +S++ D+ +EF A ++ ++E N+ YV L N+YA
Sbjct: 586 AAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYA 645
Query: 454 EMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
E GRW+DV +++ +M+ + +++ S+VE + + H
Sbjct: 646 EAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSH 681
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 177/330 (53%), Gaps = 13/330 (3%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+ F++N +I+ F+ + + + ++ M + + +T+PF+ KS++ +
Sbjct: 92 KADAFLWNVMIKGFTSCGLY---IEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEE 148
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+ +HA V+KLG + D+YV NSL+ +Y + ++F+EM RD+VSW MI G+
Sbjct: 149 GKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD-AEKVFEEMPERDIVSWNSMISGYL 207
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL-DV 273
G +L+ F++M G P+R + ++AL AC+ + +MG IH R+ E DV
Sbjct: 208 ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM-EQ 332
++ T+++DMY+K G V R+F+ + ++N+ WN +I A +A F +M EQ
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
+G++ D +T + +L A S +++ GR I G+ + + GF+P++ ++D+ G L
Sbjct: 328 NGLQPDVITSINLLPA---SAILE-GRTIHGYAM--RRGFLPHMVLETALIDMYGECGQL 381
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+ A EV+ + W S++ + G
Sbjct: 382 KSA-EVIFDRMAEKNVISWNSIIAAYVQNG 410
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 146/305 (47%), Gaps = 12/305 (3%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + +NS+I + + + L +F M + P+ ++ + S
Sbjct: 191 MPERDIVSWNSMISGY---LALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 153 AQAQSVHAHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
+ +H H ++ D+ V S+L +Y+ + S ++F+ M R++V+W VMI
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEV-SYAERIFNGMIQRNIVAWNVMIG 306
Query: 212 GFRNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
+ G+ DA L F++M + G+ P+ +T +N L A A+ G IH + R G+
Sbjct: 307 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFL 362
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
+VL TALIDMY +CG+++ +F + EKNV +WN++I A+ LF +
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
+ D T+ ++L A S + GR+I ++V+ +Y N +V + A G
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW--SNTIILNSLVHMYAMCG 480
Query: 391 SLREA 395
L +A
Sbjct: 481 DLEDA 485
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%)
Query: 183 ASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
A RL QLFDEM D W VMI GF + G + +A+ + +M +AGV + T
Sbjct: 75 ADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYP 134
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK 302
+ + A ++E G IH + + G+ DV + +LI +Y K G + +VF + E+
Sbjct: 135 FVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER 194
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQI 361
++ +WN++I G G ++ LF M + G + D + ++ L AC+H MG++I
Sbjct: 195 DIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 289 VEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
+E+ +++F + + + F WN +IKG EA++ ++RM GV+AD T V+ +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 349 CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC--MVDLLARSGSLREAFEVMRCMPFDP 406
++ G++I ++ K GF+ +V Y C ++ L + G +A +V MP +
Sbjct: 140 VAGISSLEEGKKIHAMVI--KLGFVSDV--YVCNSLISLYMKLGCAWDAEKVFEEMP-ER 194
Query: 407 TKAMWGSLLVSSKSQGD 423
W S++ + GD
Sbjct: 195 DIVSWNSMISGYLALGD 211
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 212/376 (56%), Gaps = 12/376 (3%)
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
F +NSLI ++ + +++ +++ M + + P+ +TFP + K+ +++
Sbjct: 161 FAWNSLISGYAELGQYEDAM---ALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAI 217
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
H ++K G +D+YV N+L+ +YA + R +FD + H+D VSW M+ G+ + G
Sbjct: 218 HRDLVKEGFGYDVYVLNALVVMYAKCGDIVK-ARNVFDMIPHKDYVSWNSMLTGYLHHGL 276
Query: 219 FDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTA 278
+AL F M G+ P++V + + LA + + G +H ++ R G E ++ + A
Sbjct: 277 LHEALDIFRLMVQNGIEPDKVAISSVLARVL---SFKHGRQLHGWVIRRGMEWELSVANA 333
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRAD 338
LI +Y+K G++ + +F + E++ +WNA+I + +G ++ F +M + + D
Sbjct: 334 LIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPD 390
Query: 339 EVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE- 397
+T ++VLS C ++G+V+ G ++F L+ +YG P ++HYACMV+L R+G + EA+
Sbjct: 391 GITFVSVLSLCANTGMVEDGERLFS-LMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSM 449
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGR 457
+++ M + +WG+LL + G+ + E A++L ELEP N + L +Y++ R
Sbjct: 450 IVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKR 509
Query: 458 WDDVEKVRGMMKDRQL 473
+DVE+VR MM DR L
Sbjct: 510 AEDVERVRQMMVDRGL 525
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 171/344 (49%), Gaps = 29/344 (8%)
Query: 138 TFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLC------ 191
T P +F SL C+ +A H +++ HL Y+ + LG+ + RL++ C
Sbjct: 90 TEPEIFASLLETCYSLRAID---HGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVA 146
Query: 192 RQLFDEMTHRDV--VSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACA 249
++FD M+ RD +W +I G+ G+++DA+ + QM GV P+R T L AC
Sbjct: 147 HEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACG 206
Query: 250 DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA 309
G+V++G IH + + G+ DV + AL+ MYAKCG + + VF + K+ +WN+
Sbjct: 207 GIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNS 266
Query: 310 VIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK 369
++ G EA+ +F M Q+G+ D+V + +VL+ GRQ+ G+++ +
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHGRQLHGWVI--R 321
Query: 370 YGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDP----TKAMWGSLLVS-SKSQGDL 424
G + ++ L ++ G L +A C FD W +++ + SK+ L
Sbjct: 322 RGMEWELSVANALIVLYSKRGQLGQA-----CFIFDQMLERDTVSWNAIISAHSKNSNGL 376
Query: 425 EFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMM 468
++ E + R +P + +V + +L A G +D E++ +M
Sbjct: 377 KYFEQMHR--ANAKP-DGITFVSVLSLCANTGMVEDGERLFSLM 417
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 185/352 (52%), Gaps = 2/352 (0%)
Query: 138 TFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDE 197
T+ L + + + + +HA + +G + Y+ LL +YA S L LF
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDL-QTAGILFRS 168
Query: 198 MTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMG 257
+ RD++ W MI G+ G + L + M+ + P++ T + AC+ +E G
Sbjct: 169 LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHG 228
Query: 258 AWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALA 317
H + + + ++++ +AL+DMY KC +G RVF + +NV TW ++I G
Sbjct: 229 KRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYH 288
Query: 318 KSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVK 377
E ++ F +M+++G R + VT L VL+ACNH GLVD G + F + ++ YG P +
Sbjct: 289 GKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHF-YSMKRDYGIEPEGQ 347
Query: 378 HYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVEL 437
HYA MVD L R+G L+EA+E + P +WGSLL + + G+++ E A K +EL
Sbjct: 348 HYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLEL 407
Query: 438 EPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+P N YV +N YA G + KVR M++ + KD G S +E++ + H
Sbjct: 408 DPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVH 459
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L I+ M +N I+P+ YTF +F++ SA + HA ++K +I V ++L+ +
Sbjct: 194 LFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDM 253
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
Y FS ++FD+++ R+V++WT +I G+ GK + L FE+M+ G PN VT
Sbjct: 254 YFKCSS-FSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVT 312
Query: 241 MVNALAACADSGAVEMGAWIHDF-IRRN-GWELDVVLGTALIDMYAKCGRVEE 291
+ L AC G V+ G W H + ++R+ G E + A++D + GR++E
Sbjct: 313 FLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 364
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 174/302 (57%), Gaps = 1/302 (0%)
Query: 189 SLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAAC 248
S C +LF M +D ++WT MI F + G +++AL F +M V PN T + L+A
Sbjct: 389 SKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSAT 448
Query: 249 ADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWN 308
A + G IH + + D+ + +L+ MY KCG + ++FS + E N+ ++N
Sbjct: 449 ASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYN 508
Query: 309 AVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEG 368
+I G + G++A++LF+ +E G + VT LA+LSAC H G VD+G + F + +
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM-KS 567
Query: 369 KYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSE 428
Y P HYACMVDLL RSG L +A ++ MP P +WGSLL +SK+ ++ +E
Sbjct: 568 SYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAE 627
Query: 429 FVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQG 488
A+KL+ELEP ++ YV LS LY+ +G+ D +++ + K +++ KD G S + ++ +
Sbjct: 628 LAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEV 687
Query: 489 HT 490
H
Sbjct: 688 HN 689
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 129/278 (46%), Gaps = 15/278 (5%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAG-VAPNRVTMVNALAACAD 250
R LFD MT R+V++WT MI G+ AG F+D F +M+ G V N T+ AC D
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 251 SGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAV 310
G+ IH + R E D+ LG +L+ MY+K G + E VF +K K+ +WN++
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSL 347
Query: 311 IKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKY 370
I GL K EA LF +M D V+ ++ + G + ++FG + E
Sbjct: 348 ITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKD- 402
Query: 371 GFIPNVKHYACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS 427
N+ + M+ +G EA F M P + S+L ++ S DL
Sbjct: 403 ----NIT-WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457
Query: 428 EFVARKLVELEPANS-AYYVHLSNLYAEMGRWDDVEKV 464
+ ++V++ N + L ++Y + G +D K+
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + ++I AF + ++ +L F M + + PN YTF + + ++
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALC---WFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H V+K+ ++D+ V NSL+ +Y + ++F ++ ++VS+ MI G
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNT-NDAYKIFSCISEPNIVSYNTMISG 513
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMG 257
+ G AL F ++ +G PN VT + L+AC G V++G
Sbjct: 514 YSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Query: 193 QLFDEMTHRDVVSWTVMIMGFRNAGKFDDA--LLAFEQMQYAGVAPNRVTMVNALAACAD 250
+LF ++ ++ VS+ MI GF AG+FD+A L A +++ + V +
Sbjct: 134 ELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLL--------- 184
Query: 251 SGAVEMGAWIHDFIRRNGWEL-DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA 309
SG + G W G + +VV ++++ Y K GR+ + +F + E+NV TW A
Sbjct: 185 SGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTA 244
Query: 310 VIKGLALAKSGEEAIRLFNRMEQDG-VRADEVTLLAVLSACNHSGLVDMGRQIFGFL 365
+I G A E+ LF RM Q+G V+ + TL + AC G QI G +
Sbjct: 245 MIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV 301
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 197/376 (52%), Gaps = 15/376 (3%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L +F + + + + F + K+ ++ + +HA V KLG ++ V L+
Sbjct: 270 LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDF 329
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP-NRV 239
Y S CR F E+ + VSW+ +I G+ +F++A+ F+ ++ + N
Sbjct: 330 YIKCSSFESACRA-FQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF 388
Query: 240 TMVNALAACADSGAVEMGAWIH-DFIRRNGWELDVVLGT-----ALIDMYAKCGRVEEGV 293
T + AC+ +G +H D I+R+ ++G+ ALI MY+KCG +++
Sbjct: 389 TYTSIFQACSVLADCNIGGQVHADAIKRS------LIGSQYGESALITMYSKCGCLDDAN 442
Query: 294 RVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSG 353
VF S+ ++ W A I G A + EA+RLF +M G++ + VT +AVL+AC+H+G
Sbjct: 443 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAG 502
Query: 354 LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGS 413
LV+ G+ ++ KY P + HY CM+D+ ARSG L EA + M+ MPF+P W
Sbjct: 503 LVEQGKHCLDTMLR-KYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 414 LLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQL 473
L + +LE E +L +L+P ++A YV NLY G+W++ ++ +M +R L
Sbjct: 562 FLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERML 621
Query: 474 TKDLGCSSVEVEEQGH 489
K+L CS ++ + + H
Sbjct: 622 KKELSCSWIQEKGKIH 637
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 5/296 (1%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
+ +F+ M + P + L KSL P + +HAHV++ G + + ++ +
Sbjct: 169 VGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNM 228
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
Y L +++FD+M + V+ T +++G+ AG+ DAL F + GV +
Sbjct: 229 YVKCGWLVG-AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFV 287
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
L ACA + +G IH + + G E +V +GT L+D Y KC E R F ++
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRME-QDGVRADEVTLLAVLSACNHSGLVDMGR 359
E N +W+A+I G EEA++ F + ++ + T ++ AC+ ++G
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 360 QIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLL 415
Q+ + K I + + ++ + ++ G L +A EV M +P W + +
Sbjct: 408 QVHADAI--KRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFI 460
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 122/293 (41%), Gaps = 10/293 (3%)
Query: 126 HMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASP 185
M + + + Y++ LF++ + + +H + + + N +L +Y
Sbjct: 73 EMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCEC- 131
Query: 186 RLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNAL 245
R +LFDEM+ + VS T MI + G D A+ F M +G P L
Sbjct: 132 RSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLL 191
Query: 246 AACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVF 305
+ + A++ G IH + R G + + T +++MY KCG + RVF + K
Sbjct: 192 KSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPV 251
Query: 306 TWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFL 365
++ G A +A++LF + +GV D VL AC +++G+QI +
Sbjct: 252 ACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACV 311
Query: 366 VEGKYGFIPNVKHYACMVDLLARSGSLR---EAFEVMRCMPFDPTKAMWGSLL 415
K G V +VD + S AF+ +R +P W +++
Sbjct: 312 --AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR----EPNDVSWSAII 358
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
K ++A ++M AGV+ + + AC + ++ G +HD +R V+L
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQN 122
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
++ MY +C +E+ ++F + E N + +I A ++A+ LF+ M G +
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
+L + + +D GRQI ++ + G N +V++ + G L A
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVI--RAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQG 422
V M A G L+V G
Sbjct: 241 VFDQMAVKKPVACTG-LMVGYTQAG 264
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 201/394 (51%), Gaps = 40/394 (10%)
Query: 132 ILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAA-------- 183
I PN +TF + S + + +H + LK+G +++V +++L Y
Sbjct: 89 IRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDAR 148
Query: 184 -------SPRLFSLCR---------------QLFDEMTHRDVVSWTVMIMGFRNAGKFDD 221
P + S+ LF M R VV+W +I GF G+ ++
Sbjct: 149 RCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEE 208
Query: 222 ALLAFEQMQYAGVA-PNRVTMVNALAACADSGAVEMGAWIHD-FIRRNGWELDVVLGTAL 279
A+ F M GV PN T A+ A ++ + G IH I+ G +V + +L
Sbjct: 209 AVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSL 268
Query: 280 IDMYAKCGRVEEGVRVFSSVKE--KNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD-GVR 336
I Y+KCG +E+ + F+ ++E +N+ +WN++I G A GEEA+ +F +M +D +R
Sbjct: 269 ISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLR 328
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNV---KHYACMVDLLARSGSLR 393
+ VT+L VL ACNH+GL+ G F V PN+ +HYACMVD+L+RSG +
Sbjct: 329 PNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDD--PNLLELEHYACMVDMLSRSGRFK 386
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYA 453
EA E+++ MP DP W +LL + + ++ A K++EL+P + + YV LSN Y+
Sbjct: 387 EAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYS 446
Query: 454 EMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
M W +V +R MK+ L + GCS +EV +Q
Sbjct: 447 AMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQ 480
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 29/238 (12%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRN-TILPNHYTFPFLFKSLSAPCH 151
+P V +N++I FS + + ++ + F M R ++PN TFP ++S
Sbjct: 185 MPERSVVTWNAVIGGFSQTGRNEEAV---NTFVDMLREGVVIPNESTFPCAITAISNIAS 241
Query: 152 FAQAQSVHAHVLK-LGHLHDIYVHNSLLGVYAASPRLFSLCRQLFD--------EMTHRD 202
+S+HA +K LG +++V NSL+ Y S C + D E R+
Sbjct: 242 HGAGKSIHACAIKFLGKRFNVFVWNSLISFY-------SKCGNMEDSLLAFNKLEEEQRN 294
Query: 203 VVSWTVMIMGFRNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAACADSGAVEMG---- 257
+VSW MI G+ + G+ ++A+ FE+M + + PN VT++ L AC +G ++ G
Sbjct: 295 IVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYF 354
Query: 258 -AWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK-EKNVFTWNAVIKG 313
++D+ N EL+ ++DM ++ GR +E + S+ + + W A++ G
Sbjct: 355 NKAVNDYDDPNLLELEHY--ACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGG 410
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 13/287 (4%)
Query: 193 QLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSG 252
++FDE+ DV+S T +I F + +A AF+++ G+ PN T + + S
Sbjct: 48 KVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSR 107
Query: 253 AVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIK 312
V++G +H + + G +V +G+A+++ Y K + + R F ++ NV + +I
Sbjct: 108 DVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLIS 167
Query: 313 GLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF-GFLVEGKYG 371
G EEA+ LF M + V VT AV+ + +G + F L EG
Sbjct: 168 GYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLREGV-- 221
Query: 372 FIPNVKHYACMVDLLARSGSLREAFEVMRC-MPFDPTK---AMWGSLLVSSKSQGDLEFS 427
IPN + C + ++ S + C + F + +W SL+ G++E S
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 428 EFVARKLVELEPANSAYYVHLSNLYAEMGRWDD-VEKVRGMMKDRQL 473
KL E E N + + YA GR ++ V M+KD L
Sbjct: 282 LLAFNKLEE-EQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNL 327
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 204/396 (51%), Gaps = 6/396 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+PR V +N+LI ++ +L F M + N+ T + + P
Sbjct: 423 MPRRDVVAWNALIGGYAEDEDPDKALAA---FQTMRVEGVSSNYITVVSVLSACLLPGDL 479
Query: 153 AQ-AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
+ + +HA+++ G D +V NSL+ +YA L S + LF+ + +R++++W M+
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS-SQDLFNGLDNRNIITWNAMLA 538
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ G ++ L +M+ GV+ ++ + L+A A +E G +H + G+E
Sbjct: 539 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
D + A DMY+KCG + E V++ +++ +WN +I L EE F+ M
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ G++ VT +++L+AC+H GLVD G + + +G P ++H C++DLL RSG
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR-DFGLEPAIEHCICVIDLLGRSGR 717
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNL 451
L EA + MP P +W SLL S K G+L+ A L +LEP + + YV SN+
Sbjct: 718 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 777
Query: 452 YAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
+A GRW+DVE VR M + + K CS V+++++
Sbjct: 778 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDK 813
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 179/385 (46%), Gaps = 13/385 (3%)
Query: 39 LLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHV 98
LLKD R QI Q++ L+S + + I++ S R +
Sbjct: 172 LLKDESLGR----QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 227
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
+NS+ A++ + H S S+ H N T L L H + +
Sbjct: 228 S-WNSIAAAYAQNGHIEESFRIFSLMRRFHDEV---NSTTVSTLLSVLGHVDHQKWGRGI 283
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
H V+K+G + V N+LL +YA + R +F +M +D++SW ++ F N G+
Sbjct: 284 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE-ANLVFKQMPTKDLISWNSLMASFVNDGR 342
Query: 219 FDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTA 278
DAL M +G + N VT +ALAAC E G +H + +G + ++G A
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 402
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRAD 338
L+ MY K G + E RV + ++V WNA+I G A + ++A+ F M +GV ++
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 462
Query: 339 EVTLLAVLSACNHSG-LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
+T+++VLSAC G L++ G+ + ++V + +VK+ ++ + A+ G L + +
Sbjct: 463 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQD 520
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQG 422
+ + + W ++L ++ G
Sbjct: 521 LFNGLD-NRNIITWNAMLAANAHHG 544
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 151/315 (47%), Gaps = 23/315 (7%)
Query: 118 LTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCH-----FAQAQSVHAHVLKLGHLHDIY 172
L + F M I P+ F+ SL C F + VH V K G L D+Y
Sbjct: 40 LEGMEFFRKMCDLGIKPS----SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 95
Query: 173 VHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYA 232
V ++L +Y L S R++F+EM R+VVSWT +++G+ + G+ ++ + ++ M+
Sbjct: 96 VSTAILHLYGVYG-LVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE 154
Query: 233 GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEG 292
GV N +M +++C +G I + ++G E + + +LI M G V+
Sbjct: 155 GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 214
Query: 293 VRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ--DGVRADEV-TLLAVLSAC 349
+F + E++ +WN++ A EE+ R+F+ M + D V + V TLL+VL
Sbjct: 215 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 274
Query: 350 NHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA 409
+H GR I G +V K GF V ++ + A +G EA V + M PTK
Sbjct: 275 DHQ---KWGRGIHGLVV--KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM---PTKD 326
Query: 410 M--WGSLLVSSKSQG 422
+ W SL+ S + G
Sbjct: 327 LISWNSLMASFVNDG 341
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 4/237 (1%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADS 251
R LFD M R+ VSW M+ G G + + + F +M G+ P+ + + + AC S
Sbjct: 12 RHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRS 71
Query: 252 GAV-EMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAV 310
G++ G +H F+ ++G DV + TA++ +Y G V +VF + ++NV +W ++
Sbjct: 72 GSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSL 131
Query: 311 IKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKY 370
+ G + EE I ++ M +GV +E ++ V+S+C +GRQI G +V K
Sbjct: 132 MVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV--KS 189
Query: 371 GFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS 427
G + ++ +L G++ A + M T + W S+ + G +E S
Sbjct: 190 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYAQNGHIEES 245
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 282 MYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVT 341
MY K GRV+ +F + +N +WN ++ G+ E + F +M G++
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 342 LLAVLSACNHSG-LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
+ ++++AC SG + G Q+ GF+ K G + +V ++ L G + + +V
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVA--KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 401 CMPFDPTKAMWGSLLVSSKSQGDLE 425
MP D W SL+V +G+ E
Sbjct: 119 EMP-DRNVVSWTSLMVGYSDKGEPE 142
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 204/396 (51%), Gaps = 6/396 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+PR V +N+LI ++ +L F M + N+ T + + P
Sbjct: 406 MPRRDVVAWNALIGGYAEDEDPDKALAA---FQTMRVEGVSSNYITVVSVLSACLLPGDL 462
Query: 153 AQ-AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
+ + +HA+++ G D +V NSL+ +YA L S + LF+ + +R++++W M+
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS-SQDLFNGLDNRNIITWNAMLA 521
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ G ++ L +M+ GV+ ++ + L+A A +E G +H + G+E
Sbjct: 522 ANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 581
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
D + A DMY+KCG + E V++ +++ +WN +I L EE F+ M
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ G++ VT +++L+AC+H GLVD G + + +G P ++H C++DLL RSG
Sbjct: 642 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR-DFGLEPAIEHCICVIDLLGRSGR 700
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNL 451
L EA + MP P +W SLL S K G+L+ A L +LEP + + YV SN+
Sbjct: 701 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 760
Query: 452 YAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
+A GRW+DVE VR M + + K CS V+++++
Sbjct: 761 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDK 796
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 179/385 (46%), Gaps = 13/385 (3%)
Query: 39 LLKDFCHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHV 98
LLKD R QI Q++ L+S + + I++ S R +
Sbjct: 155 LLKDESLGR----QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 210
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
+NS+ A++ + H S S+ H N T L L H + +
Sbjct: 211 S-WNSIAAAYAQNGHIEESFRIFSLMRRFHDEV---NSTTVSTLLSVLGHVDHQKWGRGI 266
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
H V+K+G + V N+LL +YA + R +F +M +D++SW ++ F N G+
Sbjct: 267 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE-ANLVFKQMPTKDLISWNSLMASFVNDGR 325
Query: 219 FDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTA 278
DAL M +G + N VT +ALAAC E G +H + +G + ++G A
Sbjct: 326 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRAD 338
L+ MY K G + E RV + ++V WNA+I G A + ++A+ F M +GV ++
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 445
Query: 339 EVTLLAVLSACNHSG-LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
+T+++VLSAC G L++ G+ + ++V + +VK+ ++ + A+ G L + +
Sbjct: 446 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQD 503
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQG 422
+ + + W ++L ++ G
Sbjct: 504 LFNGLD-NRNIITWNAMLAANAHHG 527
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 151/315 (47%), Gaps = 23/315 (7%)
Query: 118 LTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCH-----FAQAQSVHAHVLKLGHLHDIY 172
L + F M I P+ F+ SL C F + VH V K G L D+Y
Sbjct: 23 LEGMEFFRKMCDLGIKPS----SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 78
Query: 173 VHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYA 232
V ++L +Y L S R++F+EM R+VVSWT +++G+ + G+ ++ + ++ M+
Sbjct: 79 VSTAILHLYGVYG-LVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE 137
Query: 233 GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEG 292
GV N +M +++C +G I + ++G E + + +LI M G V+
Sbjct: 138 GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 197
Query: 293 VRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ--DGVRADEV-TLLAVLSAC 349
+F + E++ +WN++ A EE+ R+F+ M + D V + V TLL+VL
Sbjct: 198 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 257
Query: 350 NHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA 409
+H GR I G +V K GF V ++ + A +G EA V + M PTK
Sbjct: 258 DHQ---KWGRGIHGLVV--KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM---PTKD 309
Query: 410 M--WGSLLVSSKSQG 422
+ W SL+ S + G
Sbjct: 310 LISWNSLMASFVNDG 324
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 4/231 (1%)
Query: 198 MTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAV-EM 256
M R+ VSW M+ G G + + + F +M G+ P+ + + + AC SG++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 257 GAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLAL 316
G +H F+ ++G DV + TA++ +Y G V +VF + ++NV +W +++ G +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 317 AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNV 376
EE I ++ M +GV +E ++ V+S+C +GRQI G +V K G +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV--KSGLESKL 178
Query: 377 KHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS 427
++ +L G++ A + M T + W S+ + G +E S
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYAQNGHIEES 228
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 172/289 (59%), Gaps = 3/289 (1%)
Query: 202 DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIH 261
+++SWT M+ G G ++A+L +MQ +G+ PN ++ AL+ACA ++ +G IH
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIH 569
Query: 262 DFIRRNGWELDVV-LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSG 320
+I RN +V + T+L+DMYAKCG + + +VF S + NA+I AL +
Sbjct: 570 GYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNL 629
Query: 321 EEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA 380
+EAI L+ +E G++ D +T+ VLSACNH+G ++ +IF +V K P ++HY
Sbjct: 630 KEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS-KRSMKPCLEHYG 688
Query: 381 CMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPA 440
MVDLLA +G +A ++ MPF P M SL+ S Q E ++++RKL+E EP
Sbjct: 689 LMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPE 748
Query: 441 NSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVE-EQG 488
NS YV +SN YA G WD+V K+R MMK + L K GCS +++ E+G
Sbjct: 749 NSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEG 797
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 158/303 (52%), Gaps = 12/303 (3%)
Query: 124 FAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAA 183
F M N I P+++ P + K+ A + VH +V+K G ++V +SL +Y
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 184 SPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVN 243
L ++FDE+ R+ V+W +++G+ GK ++A+ F M+ GV P RVT+
Sbjct: 221 CGVLDD-ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 244 ALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKN 303
L+A A+ G VE G H NG ELD +LGT+L++ Y K G +E VF + EK+
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKD 339
Query: 304 VFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFG 363
V TWN +I G E+AI + M + ++ D VTL ++SA + + +G+++
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 364 FLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA----MWGSLLVSSK 419
+ + ++ F ++ + ++D+ A+ GS+ +A +V FD T +W +LL +
Sbjct: 400 YCI--RHSFESDIVLASTVMDMYAKCGSIVDAKKV-----FDSTVEKDLILWNTLLAAYA 452
Query: 420 SQG 422
G
Sbjct: 453 ESG 455
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 152/310 (49%), Gaps = 6/310 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + +N+L+ + + + ++ +F+ M + + P T + +
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAI---RLFSDMRKQGVEPTRVTVSTCLSASANMGGV 290
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ + HA + G D + SLL Y L +FD M +DVV+W ++I G
Sbjct: 291 EEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG-LIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G +DA+ + M+ + + VT+ ++A A + +++G + + R+ +E D
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+VL + ++DMYAKCG + + +VF S EK++ WN ++ A + EA+RLF M+
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
+GV + +T ++ + +G VD + + FL G IPN+ + M++ + ++G
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDM--FLQMQSSGIIPNLISWTTMMNGMVQNGCS 527
Query: 393 REAFEVMRCM 402
EA +R M
Sbjct: 528 EEAILFLRKM 537
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 3/211 (1%)
Query: 152 FAQAQSVHAHVLKLGHLH--DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVM 209
+ + +HA +LK G + + Y+ L+ YA L + LF ++ R+V SW +
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDAL-EIAEVLFSKLRVRNVFSWAAI 144
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
I G + AL+ F +M + P+ + N AC G +H ++ ++G
Sbjct: 145 IGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL 204
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
E V + ++L DMY KCG +++ +VF + ++N WNA++ G EEAIRLF+
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
M + GV VT+ LSA + G V+ G+Q
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 149/507 (29%), Positives = 242/507 (47%), Gaps = 63/507 (12%)
Query: 32 FSDRAVTLLKDF-------CHSRL----HVQQIQ-AQLILHNLQSNPTIAHHFITVCQSH 79
FS R +T L+ + C+S L ++ IQ Q ++ +SN I H SH
Sbjct: 4 FSSRRITSLRSYTIIKHSSCYSTLVSDGNIFSIQHFQSLMQKYESNLKIIHQL----HSH 59
Query: 80 XXXXXXXXXXXXXVPRPHVFIFNSLIRAFS------HSHHHHNSLTPLSIFAHMHRNTIL 133
+F+FN L+R +S H++ ++ L L F H ++
Sbjct: 60 FTTSGFLLLHQKQ-NSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLH-FLSDHNKSLP 117
Query: 134 P-NHYTFPFLFKSLSAP--CHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSL 190
P + +T+ FL K+ S P +H LKLG +YV +L+G+Y +
Sbjct: 118 PFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMID- 176
Query: 191 CRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQ-------------YA----- 232
++FDEM R+ V+W VMI G N G F+ AL E+M YA
Sbjct: 177 AHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKP 236
Query: 233 --------------GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW-ELDVVLGT 277
+ PN +T++ L A + G ++M +H ++ + G+ D+ +
Sbjct: 237 KEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTN 296
Query: 278 ALIDMYAKCGRVEEGVRVFSSVK--EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
+LID YAKCG ++ + F + KN+ +W +I A+ G+EA+ +F ME+ G+
Sbjct: 297 SLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGL 356
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
+ + VT+++VL+AC+H GL + F + +Y P+VKHY C+VD+L R G L EA
Sbjct: 357 KPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEA 416
Query: 396 FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEM 455
++ +P + +W LL + D E +E V RKL+ELE ++ YV +SN++
Sbjct: 417 EKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGT 476
Query: 456 GRWDDVEKVRGMMKDRQLTKDLGCSSV 482
GR+ D ++ R M R + K G S V
Sbjct: 477 GRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 194/402 (48%), Gaps = 34/402 (8%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L + + R +P+ YTF L + C + H +K G + V NSL+ +
Sbjct: 103 LGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHM 162
Query: 181 YAA------SPRLF----------------SLCR--------QLFDEMTHRDVVSWTVMI 210
Y + +LF + R +LFDEM ++++SW +MI
Sbjct: 163 YTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMI 222
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
+ A ++ F +M AG N T+V L AC S ++ G +H + R
Sbjct: 223 SAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLN 282
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
VV+ TALIDMY KC V R+F S+ +N TWN +I L E + LF M
Sbjct: 283 SSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM 342
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
+R DEVT + VL C +GLV G+ + +V+ ++ PN H CM +L + +G
Sbjct: 343 INGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVD-EFQIKPNFGHQWCMANLYSSAG 401
Query: 391 SLREAFEVMRCMPFD---PTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVH 447
EA E ++ +P + P W +LL SS+ G+ E +A+ L+E +P N YY
Sbjct: 402 FPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHL 461
Query: 448 LSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
L N+Y+ GRW+DV +VR M+K+R++ + GC V+++E H
Sbjct: 462 LMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P ++ +N +I A+ ++ N +S+F M R N T L +
Sbjct: 210 MPDKNIISWNIMISAYLGAN---NPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +SVHA +++ + + +L+ +Y + L R++FD ++ R+ V+W VMI+
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEV-GLARRIFDSLSIRNKVTWNVMILA 325
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
G+ + L FE M + P+ VT V L CA +G V G + + + +++
Sbjct: 326 HCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM-VDEFQIK 384
Query: 273 VVLG--TALIDMYAKCGRVEEGVRVFSSVKEKNV 304
G + ++Y+ G EE ++ +++V
Sbjct: 385 PNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDV 418
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 213/385 (55%), Gaps = 21/385 (5%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ-- 154
++ +NS++ F H+ + +L +F M + + + T L + C F +
Sbjct: 292 NIVSWNSILAGFVHNQRYDEAL---EMFHLMVQEAVEVDEVTVVSLLR----VCKFFEQP 344
Query: 155 --AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+S+H +++ G+ + +SL+ Y S L + D MT++DVVS + MI G
Sbjct: 345 LPCKSIHGVIIRRGYESNEVALSSLIDAYT-SCSLVDDAGTVLDSMTYKDVVSCSTMISG 403
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDF-IRRNGWEL 271
+AG+ D+A+ F M+ PN +T+++ L AC+ S + W H IRR+
Sbjct: 404 LAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN 460
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
D+ +GT+++D YAKCG +E R F + EKN+ +W +I A+ ++A+ LF+ M+
Sbjct: 461 DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK 520
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
Q G + VT LA LSACNH GLV G IF +VE + P+++HY+C+VD+L+R+G
Sbjct: 521 QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK--PSLQHYSCIVDMLSRAGE 578
Query: 392 LREAFEVMRCMPFD--PTKAMWGSLLVSSKSQ-GDLEFSEFVARKLVELEPANSAYYVHL 448
+ A E+++ +P D + WG++L +++ L + V +++ELEP S+ Y+
Sbjct: 579 IDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLA 638
Query: 449 SNLYAEMGRWDDVEKVRGMMKDRQL 473
S+ +A W+DV +R ++K+R++
Sbjct: 639 SSTFAAEKSWEDVAMMRRLVKERKV 663
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 136/253 (53%), Gaps = 6/253 (2%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+ +H +V++ G V NS+L +YA S L + R+LFDEM+ RDV+SW+V+I +
Sbjct: 143 DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSA--RKLFDEMSERDVISWSVVIRSY 200
Query: 214 RNAGKFDDALLAFEQMQY-AGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL- 271
+ + L F++M + A P+ VT+ + L AC +++G +H F R G++L
Sbjct: 201 VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
DV + +LIDMY+K V+ RVF +N+ +WN+++ G + +EA+ +F+ M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
Q+ V DEVT++++L C + I G ++ + G+ N + ++D
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII--RRGYESNEVALSSLIDAYTSCSL 378
Query: 392 LREAFEVMRCMPF 404
+ +A V+ M +
Sbjct: 379 VDDAGTVLDSMTY 391
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 135/304 (44%), Gaps = 41/304 (13%)
Query: 121 LSIFAHMHRNTILPNH-YTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLG 179
+S ++ + R + N + FP +FK+ + Q S+ +K G L
Sbjct: 29 VSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYMKCGDL----------- 77
Query: 180 VYAASPRLFSLCRQL--FDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
C L FD M RD VSW V++ G + G ++ L F +++ G PN
Sbjct: 78 -----------CSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPN 126
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS 297
T+V + AC G IH ++ R+G+ + +++ MYA + ++F
Sbjct: 127 TSTLVLVIHAC--RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFD 183
Query: 298 SVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG-VRADEVTLLAVLSACNHSGLVD 356
+ E++V +W+ VI+ +K ++LF M + D VT+ +VL AC +D
Sbjct: 184 EMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDID 243
Query: 357 MGRQIFGFLVEGKYGF-IPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAM----W 411
+GR + GF + + GF + +V ++D+ ++ + AF V FD T W
Sbjct: 244 VGRSVHGFSI--RRGFDLADVFVCNSLIDMYSKGFDVDSAFRV-----FDETTCRNIVSW 296
Query: 412 GSLL 415
S+L
Sbjct: 297 NSIL 300
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 22/185 (11%)
Query: 216 AGKFDDALLAFEQMQYAGVAPNR-VTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
+GK+ + + + ++Q AGV N ACA +W+
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKL------SWLFQ------------ 63
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
G ++ D Y KCG + G+R F + ++ +WN ++ GL EE + F+++ G
Sbjct: 64 -GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
+ TL+ V+ AC L G +I G+++ + I +V++ + + S S R+
Sbjct: 123 FEPNTSTLVLVIHACR--SLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARK 180
Query: 395 AFEVM 399
F+ M
Sbjct: 181 LFDEM 185
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 187/340 (55%), Gaps = 3/340 (0%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
F SVH +VL+ G+ D NSL+ +YA L +F+ M RD+VSW +I
Sbjct: 362 FDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHL-DKSLVIFERMNERDLVSWNAIIS 420
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAP-NRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G+ ALL FE+M++ V + T+V+ L AC+ +GA+ +G IH + R+
Sbjct: 421 GYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIR 480
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
++ TAL+DMY+KCG +E R F S+ K+V +W +I G G+ A+ +++
Sbjct: 481 PCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEF 540
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
G+ + V LAVLS+C+H+G+V G +IF +V +G PN +H AC+VDLL R+
Sbjct: 541 LHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR-DFGVEPNHEHLACVVDLLCRAK 599
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSN 450
+ +AF+ + P+ + G +L + ++ G E + + ++EL+P ++ +YV L +
Sbjct: 600 RIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGH 659
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
+A M RWDDV + M+ L K G S +E+ + T
Sbjct: 660 SFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTT 699
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 160/305 (52%), Gaps = 13/305 (4%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
FNS I S SH H + LS F+ M N +LP+ +TFP L K+ ++ + S+H
Sbjct: 14 FNSHINHLS-SHGDHKQV--LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQ 70
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
VL G D Y+ +SL+ +YA L + R++F+EM RDVV WT MI + AG
Sbjct: 71 QVLVNGFSSDFYISSSLVNLYAKFG-LLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 221 DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAW--IHDFIRRNGWELDVVLGTA 278
+A +M++ G+ P VT++ L SG +E+ +HDF G++ D+ + +
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEML-----SGVLEITQLQCLHDFAVIYGFDCDIAVMNS 184
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRAD 338
++++Y KC V + +F ++++++ +WN +I G A + E ++L RM DG+R D
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 339 EVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
+ T A LS ++MGR + +V K GF ++ ++ + + G ++ V
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIV--KTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 399 MRCMP 403
+ +P
Sbjct: 303 LETIP 307
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 6/281 (2%)
Query: 122 SIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVY 181
S+ M I P T L + LS Q Q +H + G DI V NS+L +Y
Sbjct: 133 SLVNEMRFQGIKPGPVT---LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 182 AASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTM 241
+ + LFD+M RD+VSW MI G+ + G + L +M+ G+ P++ T
Sbjct: 190 CKCDHVGD-AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Query: 242 VNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE 301
+L+ +EMG +H I + G+++D+ L TALI MY KCG+ E RV ++
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN 308
Query: 302 KNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQI 361
K+V W +I GL E+A+ +F+ M Q G + +V+++C G D+G +
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV 368
Query: 362 FGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
G+++ ++G+ + ++ + A+ G L ++ + M
Sbjct: 369 HGYVL--RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 163/321 (50%), Gaps = 20/321 (6%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L + M + + P+ TF C + +H ++K G D+++ +L+ +
Sbjct: 230 LKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITM 289
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
Y + + R L + + ++DVV WTVMI G G+ + AL+ F +M +G +
Sbjct: 290 YLKCGKEEASYRVL-ETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
+ + +A+CA G+ ++GA +H ++ R+G+ LD +LI MYAKCG +++ + +F +
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV-RADEVTLLAVLSACNHSGLVDMGR 359
E+++ +WNA+I G A +A+ LF M+ V + D T++++L AC+ +G + +G+
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK 468
Query: 360 QIFGFLVEGKYGFI-PNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTK----AMWGSL 414
I ++ FI P +VD+ ++ G L A RC FD WG L
Sbjct: 469 LIHCIVIR---SFIRPCSLVDTALVDMYSKCGYLEAA---QRC--FDSISWKDVVSWGIL 520
Query: 415 LVSSK--SQGDLE---FSEFV 430
+ +GD+ +SEF+
Sbjct: 521 IAGYGFHGKGDIALEIYSEFL 541
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 200/398 (50%), Gaps = 6/398 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+ + V + +++ F+ + SL + + M + L ++
Sbjct: 177 MAKRDVICWTTMVTGFAQAG---KSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDT 233
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+SVH ++ + G ++ V SL+ +YA + ++F M + VSW +I G
Sbjct: 234 KMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVG-FIEVASRVFSRMMFKTAVSWGSLISG 292
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
F G + A A +MQ G P+ VT+V L AC+ G+++ G +H +I + LD
Sbjct: 293 FAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR-HVLD 351
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
V TAL+DMY+KCG + +F V K++ WN +I + +G+E + LF +M +
Sbjct: 352 RVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE 411
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
+ D T ++LSA +HSGLV+ G+ F ++ KY P+ KHY C++DLLAR+G +
Sbjct: 412 SNIEPDHATFASLLSALSHSGLVEQGQHWFSVMIN-KYKIQPSEKHYVCLIDLLARAGRV 470
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
EA +++ D +W +LL + +L + A K+++L P + +SN +
Sbjct: 471 EEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFF 530
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
A +W +V KVR +M++ + K G S++EV + T
Sbjct: 531 ATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRT 568
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 177/367 (48%), Gaps = 12/367 (3%)
Query: 35 RAVTLLKDFCHSRLHVQQIQAQLI-LHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXV 93
+ + L+ + H+ QI A +I NL + +I+ I C +
Sbjct: 18 KRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASC-GRIGEISYARKVFDEL 76
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P+ V ++NS+I +S N L ++ M I P+ TF K+ +
Sbjct: 77 PQRGVSVYNSMIVVYSRGK---NPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLE 133
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+ ++V + G+ +D++V +S+L +Y ++ LF +M RDV+ WT M+ GF
Sbjct: 134 KGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKM-DEAEVLFGKMAKRDVICWTTMVTGF 192
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
AGK A+ + +MQ G +RV M+ L A D G +MG +H ++ R G ++V
Sbjct: 193 AQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNV 252
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
V+ T+L+DMYAK G +E RVFS + K +W ++I G A +A M+
Sbjct: 253 VVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSL 312
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL- 392
G + D VTL+ VL AC+ G + GR + +++ K + V A M D+ ++ G+L
Sbjct: 313 GFQPDLVTLVGVLVACSQVGSLKTGRLVHCYIL--KRHVLDRVTATALM-DMYSKCGALS 369
Query: 393 --REAFE 397
RE FE
Sbjct: 370 SSREIFE 376
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 174/286 (60%), Gaps = 9/286 (3%)
Query: 202 DVVSWTVMIMG----FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMG 257
DVVSWT +I G F+N FD AF+QM G+ PN T++ L AC ++ G
Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFD----AFKQMLTHGLYPNSATIITLLPACTTLAYMKHG 307
Query: 258 AWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALA 317
IH + G E + +AL+DMY KCG + E + +F +K T+N++I A
Sbjct: 308 KEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANH 367
Query: 318 KSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVK 377
++A+ LF++ME G + D +T A+L+AC+H+GL D+G+ +F L++ KY +P ++
Sbjct: 368 GLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLF-LLMQNKYRIVPRLE 426
Query: 378 HYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVEL 437
HYACMVDLL R+G L EA+E+++ M +P +WG+LL + ++ G++E + A+ L EL
Sbjct: 427 HYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAEL 486
Query: 438 EPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
EP NS + L++LYA G W+ V +++ M+K ++ + LG S VE
Sbjct: 487 EPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 134/282 (47%), Gaps = 9/282 (3%)
Query: 127 MHRNTILPNHY------TFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
M + TI+P+ + ++ L ++ F + + +HAH++ G + L+
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
Y ++ R++FDEM RD+ VMI G + ++L F +M G+ +
Sbjct: 61 YVECGKVLD-ARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFI 119
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
+ + L A + E G IH + + +E D + ++LIDMY+K G V +VFS +
Sbjct: 120 VPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG 179
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
E+++ +NA+I G A +EA+ L M+ G++ D +T A++S +H + +
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
I + G+ P+V + ++ L + +AF+ + M
Sbjct: 240 ILELMCLD--GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQM 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 98/220 (44%), Gaps = 8/220 (3%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P V + S+I H+ + + F M + + PN T L + + +
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDA---FKQMLTHGLYPNSATIITLLPACTTLAYMKH 306
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+ +H + + G +V ++LL +Y S LF + + V++ MI +
Sbjct: 307 GKEIHGYSVVTGLEDHGFVRSALLDMYGKCG-FISEAMILFRKTPKKTTVTFNSMIFCYA 365
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
N G D A+ F+QM+ G + +T L AC+ +G ++G + + +N + +
Sbjct: 366 NHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLF-LLMQNKYRIVPR 424
Query: 275 LG--TALIDMYAKCGRVEEGVRVFSSVK-EKNVFTWNAVI 311
L ++D+ + G++ E + +++ E ++F W A++
Sbjct: 425 LEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALL 464
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 198/395 (50%), Gaps = 37/395 (9%)
Query: 44 CHSRLHVQQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNS 103
C + ++QI ++I HNL ++ + I+V S + P F +N
Sbjct: 30 CSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQ-LQSPSTFTWNL 88
Query: 104 LIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVL 163
+IR+ S +H +L + H++ + +TFPF+ K+ A VH +
Sbjct: 89 MIRSLSVNHKPREALLLFILMMISHQSQF--DKFTFPFVIKACLASSSIRLGTQVHGLAI 146
Query: 164 KLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDAL 223
K G +D++ N+L+ +Y + S R++FD+M R +VSWT M+ G + + D A
Sbjct: 147 KAGFFNDVFFQNTLMDLYFKCGKPDS-GRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 224 LAFEQM-------------------------------QYAGVAPNRVTMVNALAACADSG 252
+ F QM Q V PN T+VN L A G
Sbjct: 206 IVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLG 265
Query: 253 AVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIK 312
++ MG W+HD+ +NG+ LD LGTALIDMY+KCG +++ +VF ++ K++ TWN++I
Sbjct: 266 SLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMIT 325
Query: 313 GLALAKSGEEAIRLFNRMEQDG-VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG 371
L + GEEA+ LF ME++ V D +T + VLSAC ++G V G + F +++ YG
Sbjct: 326 SLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ-VYG 384
Query: 372 FIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDP 406
P +H ACM+ LL ++ + +A ++ M DP
Sbjct: 385 ISPIREHNACMIQLLEQALEVEKASNLVESMDSDP 419
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 135/299 (45%), Gaps = 36/299 (12%)
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+F+Q + +H ++K +D + L+ V ++S +F+++ +W +MI
Sbjct: 32 NFSQLKQIHTKIIKHNLTNDQLLVRQLISV-SSSFGETQYASLVFNQLQSPSTFTWNLMI 90
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAP-NRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
K +ALL F M + + ++ T + AC S ++ +G +H + G+
Sbjct: 91 RSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGF 150
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVR-------------------------------VFSS 298
DV L+D+Y KCG+ + G + VF+
Sbjct: 151 FNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQ 210
Query: 299 VKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
+ +NV +W A+I + +EA +LF RM+ D V+ +E T++ +L A G + MG
Sbjct: 211 MPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 270
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVS 417
R + + K GF+ + ++D+ ++ GSL++A +V M + A W S++ S
Sbjct: 271 RWVHDY--AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ-GKSLATWNSMITS 326
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 203/394 (51%), Gaps = 5/394 (1%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
+V ++I + H + L +F+ M R + PN T+ + S + Q
Sbjct: 220 NVITLTAVISGLIENELHEDGL---RLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQ 276
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
+HA + K G ++ + ++L+ +Y+ + +F+ T D VS TV+++G
Sbjct: 277 QIHALLWKYGIESELCIESALMDMYSKCGSIED-AWTIFESTTEVDEVSMTVILVGLAQN 335
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
G ++A+ F +M AGV + + L ++ +G +H + + + + +
Sbjct: 336 GSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVN 395
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
LI+MY+KCG + + VF + ++N +WN++I A G A++L+ M V+
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
+VT L++L AC+H GL+D GR++ + E +G P +HY C++D+L R+G L+EA
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKE-VHGIEPRTEHYTCIIDMLGRAGLLKEAK 514
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMG 456
+ +P P +W +LL + GD E E+ A +L + P +S+ ++ ++N+Y+ G
Sbjct: 515 SFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRG 574
Query: 457 RWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
+W + K MK +TK+ G SS+E+E + H+
Sbjct: 575 KWKERAKTIKRMKAMGVTKETGISSIEIEHKTHS 608
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 143/291 (49%), Gaps = 10/291 (3%)
Query: 135 NHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQL 194
+H T + P + +HA + G+ +I V N L+ Y S R +
Sbjct: 154 DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS-GRGV 212
Query: 195 FDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAV 254
FD M+HR+V++ T +I G +D L F M+ V PN VT ++ALAAC+ S +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 255 EMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGL 314
G IH + + G E ++ + +AL+DMY+KCG +E+ +F S E + + ++ GL
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 315 ALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG--- 371
A S EEAI+ F RM Q GV D + AVL + +G+Q+ +++ K+
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 372 FIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
F+ N ++++ ++ G L ++ V R MP W S++ + G
Sbjct: 393 FVNN-----GLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHG 437
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 118/232 (50%), Gaps = 4/232 (1%)
Query: 167 HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAF 226
H + + V NSLL +YA +L + LFDEM RDV+S ++ GF + + +
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIK-LFDEMPMRDVISQNIVFYGFLRNRETESGFVLL 144
Query: 227 EQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKC 286
++M +G + T+ L+ C + IH +G++ ++ +G LI Y KC
Sbjct: 145 KRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKC 203
Query: 287 GRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVL 346
G G VF + +NV T AVI GL + E+ +RLF+ M + V + VT L+ L
Sbjct: 204 GCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSAL 263
Query: 347 SACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
+AC+ S + G+QI L KYG + + ++D+ ++ GS+ +A+ +
Sbjct: 264 AACSGSQRIVEGQQIHALL--WKYGIESELCIESALMDMYSKCGSIEDAWTI 313
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 184/328 (56%), Gaps = 11/328 (3%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR-DVVSWTVMIMGF 213
+ +HA V KLG I + SL+G Y++ + RQ+FDE + ++V WT MI +
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDV-DYARQVFDETPEKQNIVLWTAMISAY 142
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHD--FIRRNGWEL 271
+A+ F++M+ + + V + AL+ACAD GAV+MG I+ R+ +
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
D+ L +L++MY K G E+ ++F K+V T+ ++I G AL +E++ LF +M+
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 332 -----QDGV-RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
QD V ++VT + VL AC+HSGLV+ G++ F ++ Y P H+ CMVDL
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIM-DYNLKPREAHFGCMVDL 321
Query: 386 LARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYY 445
RSG L++A E + MP P +W +LL + G++E E V R++ EL+ + Y
Sbjct: 322 FCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDY 381
Query: 446 VHLSNLYAEMGRWDDVEKVRGMMKDRQL 473
V LSN+YA G WD+ K+R ++ R++
Sbjct: 382 VALSNIYASKGMWDEKSKMRDRVRKRRM 409
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 192/371 (51%), Gaps = 38/371 (10%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLS-APCHFAQAQSVHAHVLKLGHLHDIYVHNSLLG 179
LS+F MH + + +T P + + + A S H ++K G+ V+N+L+
Sbjct: 313 LSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVD 372
Query: 180 VYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRV 239
+YA + S + +F+ M +DV+SWT ++ G + G +D+AL F M+ G+ P+++
Sbjct: 373 MYAKRGIMDSALK-VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKI 431
Query: 240 TMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV 299
+ L+A A+ +E G +H ++G+ + + +L+ MY KCG +E+ +F+S+
Sbjct: 432 VTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSM 491
Query: 300 KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGR 359
+ +++ TW +I G A E+A R F+ M R
Sbjct: 492 EIRDLITWTCLIVGYAKNGLLEDAQRYFDSM----------------------------R 523
Query: 360 QIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSK 419
+ YG P +HYACM+DL RSG + +++ M +P +W ++L +S+
Sbjct: 524 TV--------YGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASR 575
Query: 420 SQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGC 479
G++E E A+ L+ELEP N+ YV LSN+Y+ GR D+ VR +MK R ++K+ GC
Sbjct: 576 KHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGC 635
Query: 480 SSVEVEEQGHT 490
S VE + + H+
Sbjct: 636 SWVEEKGKVHS 646
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 187/415 (45%), Gaps = 39/415 (9%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P + +N+LI + S + + ++F M + I PN YT + + ++
Sbjct: 86 PVKNTISWNALISGYCKSG---SKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLL 142
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT-HRDVVSWTVMIMG 212
+ + +H H +K G D+ V N LL +YA R+ S LF+ M ++ V+WT M+ G
Sbjct: 143 RGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRI-SEAEYLFETMEGEKNNVTWTSMLTG 201
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G A+ F ++ G N+ T + L ACA A +G +H I ++G++ +
Sbjct: 202 YSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTN 261
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ + +ALIDMYAKC +E + ++ +V +WN++I G EA+ +F RM +
Sbjct: 262 IYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHE 321
Query: 333 DGVRADEVTLLAVLS---------------------------ACNHSGLVDM--GRQIFG 363
++ D+ T+ ++L+ ++ LVDM R I
Sbjct: 322 RDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMD 381
Query: 364 FLVEGKYGFI-PNVKHYACMVDLLARSGSLREAFEV---MRCMPFDPTKAMWGSLLVSSK 419
++ G I +V + +V +GS EA ++ MR P K + S+L +S
Sbjct: 382 SALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASA 441
Query: 420 SQGDLEFSEFVARKLVELE-PANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQL 473
LEF + V ++ P++ + L +Y + G +D + M+ R L
Sbjct: 442 ELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDL 496
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 174/367 (47%), Gaps = 10/367 (2%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+ S++ +S + + + F + R N YTFP + + ++ VH
Sbjct: 195 WTSMLTGYSQNGF---AFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHC 251
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
++K G +IYV ++L+ +YA + S R L + M DVVSW MI+G G
Sbjct: 252 CIVKSGFKTNIYVQSALIDMYAKCREMES-ARALLEGMEVDDVVSWNSMIVGCVRQGLIG 310
Query: 221 DALLAFEQMQYAGVAPNRVTMVNALAACADSGA-VEMGAWIHDFIRRNGWELDVVLGTAL 279
+AL F +M + + T+ + L A S +++ + H I + G+ ++ AL
Sbjct: 311 EALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNAL 370
Query: 280 IDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADE 339
+DMYAK G ++ ++VF + EK+V +W A++ G S +EA++LF M G+ D+
Sbjct: 371 VDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDK 430
Query: 340 VTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVM 399
+ +VLSA L++ G+Q+ G + K GF ++ +V + + GSL +A +
Sbjct: 431 IVTASVLSASAELTLLEFGQQVHGNYI--KSGFPSSLSVNNSLVTMYTKCGSLEDANVIF 488
Query: 400 RCMPFDPTKAMWGSLLVSSKSQGDLEFSE--FVARKLVELEPANSAYYVHLSNLYAEMGR 457
M W L+V G LE ++ F + + V +Y + +L+ G
Sbjct: 489 NSMEIRDL-ITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGD 547
Query: 458 WDDVEKV 464
+ VE++
Sbjct: 548 FVKVEQL 554
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 5/255 (1%)
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
D + N+++ Y+ S RL S +LF ++ +SW +I G+ +G +A F +
Sbjct: 57 RDEFTWNTMIVAYSNSRRL-SDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 229 MQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGR 288
MQ G+ PN T+ + L C + G IH + G++LDV + L+ MYA+C R
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 289 VEEGVRVFSSVK-EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLS 347
+ E +F +++ EKN TW +++ G + +AI F + ++G ++++ T +VL+
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 348 ACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPT 407
AC +G Q+ +V K GF N+ + ++D+ A+ + A ++ M D
Sbjct: 236 ACASVSACRVGVQVHCCIV--KSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV 293
Query: 408 KAMWGSLLVSSKSQG 422
+ W S++V QG
Sbjct: 294 VS-WNSMIVGCVRQG 307
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
E D +I Y+ R+ + ++F S KN +WNA+I G + S EA LF
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
M+ DG++ +E TL +VL C L+ G QI G + K GF +V ++ + A+
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTI--KTGFDLDVNVVNGLLAMYAQC 173
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+ EA + M + W S+L G
Sbjct: 174 KRISEAEYLFETMEGEKNNVTWTSMLTGYSQNG 206
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 169/294 (57%), Gaps = 4/294 (1%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM--QYAGVAPNRVTMVNALAACA 249
+LF M+ +D + + MI + GK DAL F QM + + + P+ +T+ + ++A +
Sbjct: 283 EELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANS 342
Query: 250 DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA 309
G G W+ +I +G ++D +L T+LID+Y K G + ++FS++ +K+ +++A
Sbjct: 343 QLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSA 402
Query: 310 VIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK 369
+I G + EA LF M + + + VT +LSA +HSGLV G + F + +
Sbjct: 403 MIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-- 460
Query: 370 YGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEF 429
+ P+ HY MVD+L R+G L EA+E+++ MP P +WG+LL++S ++EF E
Sbjct: 461 HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEI 520
Query: 430 VARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVE 483
V+LE + Y HL+ +Y+ +GRWDD VR +K+++L K LGCS VE
Sbjct: 521 ACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 176/411 (42%), Gaps = 53/411 (12%)
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
F + L+R S H + ++ MH + I P+ + + ++ + + +
Sbjct: 70 FSWGCLVRFLSQ---HRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPI 126
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRL--FSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
HA LK G +YV L+G+Y+ RL L ++ FD++ ++ VSW ++ G+ +
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYS---RLGYIELAKKAFDDIAEKNTVSWNSLLHGYLES 183
Query: 217 GKFDDALLAFEQM-------------QYA--GVAPNRVTMVNALA-ACADSGAVEMGAWI 260
G+ D+A F+++ YA G N ++ +A+ S + +G ++
Sbjct: 184 GELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV 243
Query: 261 H------------DFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWN 308
+ ++NG V +I Y K G V+ +F + +K+ ++
Sbjct: 244 NCREMKLARTYFDAMPQKNG-----VSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYD 298
Query: 309 AVIKGLALAKSGEEAIRLFNRMEQDG--VRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
A+I ++A++LF +M + ++ DE+TL +V+SA + G G + ++
Sbjct: 299 AMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYIT 358
Query: 367 EGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA----MWGSLLVSSKSQG 422
E +G + ++DL + G +AF++ + T + + G + ++
Sbjct: 359 E--HGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEA 416
Query: 423 DLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQL 473
+ F+ + +K+ P N + L + Y+ G + K MKD L
Sbjct: 417 NSLFTAMIEKKI----PPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL 463
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 8/207 (3%)
Query: 154 QAQSVHAHVL--KLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
QA+ VHA ++ + HL I VH +L S + + +++ D SW ++
Sbjct: 18 QAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVR 77
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
KF + + + M +G+ P+ + + L AC + G IH +NG
Sbjct: 78 FLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCG 137
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
V + T L+ +Y++ G +E + F + EKN +WN+++ G + +EA R+F+++
Sbjct: 138 CVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIP 197
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMG 358
+ D V+ ++S+ G DMG
Sbjct: 198 E----KDAVSWNLIISSYAKKG--DMG 218
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHM-HRNT-ILPNHYTFPFLFKSLSAPCHFAQAQ 156
+++++I ++ + ++L +FA M RN+ I P+ T + + S + +
Sbjct: 295 LVYDAMIACYTQNGKPKDAL---KLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGT 351
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
V +++ + G D + SL+ +Y F+ ++F + +D VS++ MIMG
Sbjct: 352 WVESYITEHGIKIDDLLSTSLIDLYMKGGD-FAKAFKMFSNLNKKDTVSYSAMIMGCGIN 410
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
G +A F M + PN VT L+A + SG V+ G + ++ + E
Sbjct: 411 GMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHY 470
Query: 277 TALIDMYAKCGRVEEGVRVFSSVK-EKNVFTWNAVI 311
++DM + GR+EE + S+ + N W A++
Sbjct: 471 GIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALL 506
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 205/394 (52%), Gaps = 8/394 (2%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+NS+I A+ H L+++ M + +T + +L++ H + H
Sbjct: 208 WNSMIVAYGQ---HKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHG 264
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSL--CRQLFDEMTHRDVVSWTVMIMGFR-NAG 217
++K G + +V + L+ Y+ + ++F E+ D+V W MI G+ N
Sbjct: 265 KLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEE 324
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDF-IRRNGWELDVVLG 276
++A+ +F QMQ G P+ + V +AC++ + IH I+ + + +
Sbjct: 325 LSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN 384
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
ALI +Y K G +++ VF + E N ++N +IKG A G EA+ L+ RM G+
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIA 444
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
+++T +AVLSAC H G VD G++ F + E + P +HY+CM+DLL R+G L EA
Sbjct: 445 PNKITFVAVLSACAHCGKVDEGQEYFNTMKE-TFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMG 456
+ MP+ P W +LL + + ++ +E A +L+ ++P + YV L+N+YA+
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADAR 563
Query: 457 RWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
+W+++ VR M+ +++ K GCS +EV+++ H
Sbjct: 564 KWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHV 597
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 8/249 (3%)
Query: 170 DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM 229
+++ +N ++ YA ++ + RQLFDE+ D VS+ +I G+ +A + A++ F++M
Sbjct: 73 NVFSYNVIVKAYAKDSKI-HIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM 131
Query: 230 QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRV 289
+ G + T+ +AAC D V++ +H F G++ + A + Y+K G +
Sbjct: 132 RKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 290 EEGVRVFSSVKE-KNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
E V VF + E ++ +WN++I K G +A+ L+ M G + D TL +VL+A
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 349 CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMP--FDP 406
+ GRQ G L+ K GF N + ++D ++ G ++ + P
Sbjct: 250 LTSLDHLIGGRQFHGKLI--KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 407 TKAMWGSLL 415
+W +++
Sbjct: 308 DLVVWNTMI 316
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 145/318 (45%), Gaps = 16/318 (5%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P+P +N+LI ++ + + + +F M + + +T L ++A C
Sbjct: 100 IPQPDTVSYNTLISGYADARE---TFAAMVLFKRMRKLGFEVDGFTLSGL---IAACCDR 153
Query: 153 AQ-AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
+ +H + G V+N+ + Y+ L + RD VSW MI+
Sbjct: 154 VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIV 213
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ + AL +++M + G + T+ + L A + G H + + G+
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ 273
Query: 272 DVVLGTALIDMYAKCGRVE---EGVRVFSSVKEKNVFTWNAVIKGLALAKS-GEEAIRLF 327
+ +G+ LID Y+KCG + + +VF + ++ WN +I G ++ + EEA++ F
Sbjct: 274 NSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSF 333
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPN--VKHYACMVDL 385
+M++ G R D+ + + V SAC++ +QI G ++ IP+ + ++ L
Sbjct: 334 RQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH---IPSNRISVNNALISL 390
Query: 386 LARSGSLREAFEVMRCMP 403
+SG+L++A V MP
Sbjct: 391 YYKSGNLQDARWVFDRMP 408
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
E +V ++ YAK ++ ++F + + + ++N +I G A A+ A+ LF R
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
M + G D TL +++AC VD+ +Q+ F V G + +V + V ++
Sbjct: 131 MRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNN--AFVTYYSKG 186
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVS 417
G LREA V M + W S++V+
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVA 214
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 206/386 (53%), Gaps = 19/386 (4%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+N+L+ F + +L +FA M+R + + +T + K+ ++ Q + VHA
Sbjct: 153 WNALLSGFLRNGKGKEAL---GVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHA 209
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT-HRDVVSWTVMIMGFRNAGKF 219
V+ G D+ V + + + +S L + ++++ + H D V +I G +
Sbjct: 210 MVVVTGR--DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNY 267
Query: 220 DDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTAL 279
+A L + + PN + ++LA C+D+ + +G IH RNG+ D L L
Sbjct: 268 KEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGL 322
Query: 280 IDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM--EQDGVRA 337
+DMY KCG++ + +F ++ K+V +W ++I A+ G +A+ +F M E GV
Sbjct: 323 MDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLP 382
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
+ VT L V+SAC H+GLV G++ FG + E KY +P +HY C +D+L+++G E +
Sbjct: 383 NSVTFLVVISACAHAGLVKEGKECFGMMKE-KYRLVPGTEHYVCFIDILSKAGETEEIWR 441
Query: 398 -VMRCMPFDPTK---AMWGSLLVSSKSQGDLEFSEFVARKLV-ELEPANSAYYVHLSNLY 452
V R M D A+W ++L + DL E+VAR+L+ E P N++ YV +SN Y
Sbjct: 442 LVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFY 501
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLG 478
A MG+WD VE++RG +K++ L K G
Sbjct: 502 AAMGKWDVVEELRGKLKNKGLVKTAG 527
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 173/363 (47%), Gaps = 20/363 (5%)
Query: 116 NSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHN 175
N L++F +HR + + +TF + + S + + VHA ++K G
Sbjct: 64 NPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKT 123
Query: 176 SLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA 235
+L+ +Y+ L R +F+ + +D+VSW ++ GF GK +AL F M V
Sbjct: 124 ALIDMYSKYGHLVDSVR-VFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 236 PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRV 295
+ T+ + + CA ++ G +H + G +L VVLGTA+I Y+ G + E ++V
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKV 241
Query: 296 FSSVKEKNVFT----WNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNH 351
++S+ NV T N++I G ++ +EA L +R R + L + L+ C+
Sbjct: 242 YNSL---NVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSD 293
Query: 352 SGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMW 411
+ + +G+QI V + GF+ + K ++D+ + G + +A + R +P + W
Sbjct: 294 NSDLWIGKQI--HCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP-SKSVVSW 350
Query: 412 GSLLVSSKSQGDLEFSEFVARKLVELEPA---NSAYYVHLSNLYAEMGRWDDVEKVRGMM 468
S++ + GD + + R++ E NS ++ + + A G + ++ GMM
Sbjct: 351 TSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMM 410
Query: 469 KDR 471
K++
Sbjct: 411 KEK 413
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 3/222 (1%)
Query: 194 LFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGA 253
LFDE+ RD+ S + +G +D L F Q+ A + T L AC+
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 254 VEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKG 313
E G +H + + G E + TALIDMY+K G + + VRVF SV+EK++ +WNA++ G
Sbjct: 100 PETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 314 LALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFI 373
G+EA+ +F M ++ V E TL +V+ C ++ G+Q+ +V
Sbjct: 160 FLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL- 218
Query: 374 PNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLL 415
V M+ + G + EA +V + + M SL+
Sbjct: 219 --VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLI 258
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 168/296 (56%), Gaps = 8/296 (2%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADS 251
R +F + RD+V W +I G+ G DDA+ AF MQ G P+ VT+ + L+ACA S
Sbjct: 228 RAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQS 287
Query: 252 GAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVI 311
G +++G +H I G EL+ + ALIDMYAKCG +E VF S+ ++V N++I
Sbjct: 288 GRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMI 347
Query: 312 KGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG 371
LA+ G+EA+ +F+ ME ++ DE+T +AVL+AC H G + G +IF +
Sbjct: 348 SCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM--KTQD 405
Query: 372 FIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVA 431
PNVKH+ C++ LL RSG L+EA+ +++ M P + G+LL + K D E +E V
Sbjct: 406 VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVM 465
Query: 432 RKLVELEPANSAYY-----VHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
K++E + + Y +SNLYA RW E +R M+ R L K G SS+
Sbjct: 466 -KIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
+H+ +K G D+ V +SL+ +Y + S R++FDEM R+V +W MI G+ + G
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVS-ARKVFDEMPERNVATWNAMIGGYMSNG 126
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL-DVVLG 276
DA+LA + V N VT + + +E + R +EL +V
Sbjct: 127 ---DAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKA---RELFERMPFELKNVKAW 180
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFT------------------------------ 306
+ ++ +Y ++E+ + F + EKN F
Sbjct: 181 SVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLV 240
Query: 307 -WNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFL 365
WN +I G A ++AI F M+ +G D VT+ ++LSAC SG +D+GR++ +
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI 300
Query: 366 VEGKYGFIPNVKHYACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQG 422
G N ++D+ A+ G L A FE + +M L + K +
Sbjct: 301 --NHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKE 358
Query: 423 DLEFSEFVARKLVELEP 439
LE F + ++L+P
Sbjct: 359 ALEM--FSTMESLDLKP 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 222 ALLAFEQMQYAGVA-PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALI 280
AL+ + ++ GV P V ++ AC V +G +H + G DV++G++LI
Sbjct: 30 ALVLYGGIRRRGVYFPGWVPLILRACACVVPRVV-LGKLLHSESIKFGVCSDVMVGSSLI 88
Query: 281 DMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEV 340
MY KCG V +VF + E+NV TWNA+I G S +A+ E+ V + V
Sbjct: 89 SMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM---SNGDAVLASGLFEEISVCRNTV 145
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
T + ++ ++ R++F E + NVK ++ M+ + + + +A +
Sbjct: 146 TWIEMIKGYGKRIEIEKARELF----ERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFE 201
Query: 401 CMPFDPTKAMWGSLLVSSKSQGDLE-----FSEFVARKLV 435
+P + +W ++ GD+ F AR LV
Sbjct: 202 DIP-EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLV 240
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 209/385 (54%), Gaps = 13/385 (3%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+N++I +++ + + +S++ MH + P+ +TF L L+ + V A
Sbjct: 357 WNTMISSYNQAKLGK---SAMSVYKRMHIIGVKPDEFTFGSL---LATSLDLDVLEMVQA 410
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
++K G I + N+L+ Y+ + ++ LF+ ++++SW +I GF + G
Sbjct: 411 CIIKFGLSSKIEISNALISAYSKNGQI-EKADLLFERSLRKNLISWNAIISGFYHNGFPF 469
Query: 221 DALLAFEQMQYAGVA--PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTA 278
+ L F + + V P+ T+ L+ C + ++ +G+ H ++ R+G + ++G A
Sbjct: 470 EGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNA 529
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG-VRA 337
LI+MY++CG ++ + VF+ + EK+V +WN++I + GE A+ + M+ +G V
Sbjct: 530 LINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIP 589
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D T AVLSAC+H+GLV+ G +IF +VE +G I NV H++C+VDLL R+G L EA
Sbjct: 590 DAATFSAVLSACSHAGLVEEGLEIFNSMVE-FHGVIRNVDHFSCLVDLLGRAGHLDEAES 648
Query: 398 VMRC--MPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEM 455
+++ +W +L + + GDL+ + VA+ L+E E + + YV LSN+YA
Sbjct: 649 LVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGA 708
Query: 456 GRWDDVEKVRGMMKDRQLTKDLGCS 480
G W + E+ R + K GCS
Sbjct: 709 GMWKEAEETRRAINMIGAMKQRGCS 733
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
R V I+N++I S +H T + +F MH+ + + F F ++ + C +
Sbjct: 151 ERDDVAIWNAMITGCKESGYHE---TSVELFREMHKLGVRHD----KFGFATILSMCDYG 203
Query: 154 Q---AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDE--MTHRDVVSWTV 208
+ VH+ V+K G V N+L+ +Y + C +F+E + RD V++ V
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACL-VFEETDVAVRDQVTFNV 262
Query: 209 MIMGFRNAG-KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRN 267
+I G AG K D++LL F +M A + P +T V+ + +C+ MG +H +
Sbjct: 263 VIDGL--AGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKT 317
Query: 268 GWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLF 327
G+E ++ A + MY+ +VF S++EK++ TWN +I AK G+ A+ ++
Sbjct: 318 GYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVY 377
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA 387
RM GV+ DE T ++L+ +++M + K+G ++ ++ +
Sbjct: 378 KRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACI-----IKFGLSSKIEISNALISAYS 432
Query: 388 RSGSLREA 395
++G + +A
Sbjct: 433 KNGQIEKA 440
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 159/364 (43%), Gaps = 58/364 (15%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTIL-PNHYTFPFLFKSLSAPCHFAQAQSVH 159
N + + S + N+L +FA +HR T L P+ Y+ + VH
Sbjct: 24 LNRRLTGLTRSGENRNAL---KLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 160 AHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTV----------- 208
+ ++ G L +V N+LL +Y L SL ++ FDE+ DV SWT
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASL-KKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 209 ---------------------MIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAA 247
MI G + +G + ++ F +M GV ++ L+
Sbjct: 140 EYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSM 199
Query: 248 CADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVF--SSVKEKNVF 305
C D G+++ G +H + + G+ + + ALI MY C V + VF + V ++
Sbjct: 200 C-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQV 258
Query: 306 TWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFL 365
T+N VI GLA K +E++ +F +M + +R ++T ++V+ +C+ + MG Q+ G
Sbjct: 259 TFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLA 314
Query: 366 VEG---KYGFIPN--VKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKS 420
++ KY + N + Y+ D G+ + FE + + W + ++SS +
Sbjct: 315 IKTGYEKYTLVSNATMTMYSSFEDF----GAAHKVFESLE----EKDLVTWNT-MISSYN 365
Query: 421 QGDL 424
Q L
Sbjct: 366 QAKL 369
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 220/444 (49%), Gaps = 11/444 (2%)
Query: 51 QQIQAQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSH 110
QQI + + + N ++++ +T+ + +P +NS+I A +
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTL-YAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Query: 111 SHHHHNSLTPLSI-FAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLH 169
S SL + F + R N TF + ++S+ + +H LK
Sbjct: 494 SER---SLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIAD 550
Query: 170 DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR-DVVSWTVMIMGFRNAGKFDDALLAFEQ 228
+ N+L+ Y + C ++F M R D V+W MI G+ + AL
Sbjct: 551 EATTENALIACYGKCGEMDG-CEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWF 609
Query: 229 MQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGR 288
M G + L+A A +E G +H R E DVV+G+AL+DMY+KCGR
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 289 VEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG-VRADEVTLLAVLS 347
++ +R F+++ +N ++WN++I G A GEEA++LF M+ DG D VT + VLS
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 348 ACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPT 407
AC+H+GL++ G + F + + YG P ++H++CM D+L R+G L + + + MP P
Sbjct: 730 ACSHAGLLEEGFKHFESMSD-SYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPN 788
Query: 408 KAMWGSLL-VSSKSQG-DLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVR 465
+W ++L ++ G E + A L +LEP N+ YV L N+YA GRW+D+ K R
Sbjct: 789 VLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKAR 848
Query: 466 GMMKDRQLTKDLGCSSVEVEEQGH 489
MKD + K+ G S V +++ H
Sbjct: 849 KKMKDADVKKEAGYSWVTMKDGVH 872
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 8/257 (3%)
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
H A+ H+ + K D+Y+ N+L+ Y + S R++FDEM R+ VSW ++
Sbjct: 16 HRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVS-ARKVFDEMPLRNCVSWACIV 74
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEM--GAWIHDFIRRNG 268
G+ G+ +AL+ M G+ N+ V+ L AC + G+V + G IH + +
Sbjct: 75 SGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS 134
Query: 269 WELDVVLGTALIDMYAKC-GRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLF 327
+ +D V+ LI MY KC G V + F ++ KN +WN++I + A A R+F
Sbjct: 135 YAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIF 194
Query: 328 NRMEQDGVRADEVTLLA-VLSACNHSGL-VDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
+ M+ DG R E T + V +AC+ + V + QI + K G + ++ + +V
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI--QKSGLLTDLFVGSGLVSA 252
Query: 386 LARSGSLREAFEVMRCM 402
A+SGSL A +V M
Sbjct: 253 FAKSGSLSYARKVFNQM 269
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 124/226 (54%), Gaps = 5/226 (2%)
Query: 145 SLSAPCHFAQAQSVHAHVLKLGHLHD--IYVHNSLLGVYAASPRLFSLCRQLFDEMTHRD 202
SL+ + + VH HV+ G L D + + N L+ +YA + R++F MT +D
Sbjct: 322 SLAEEVGLKKGREVHGHVITTG-LVDFMVGIGNGLVNMYAKCGSIAD-ARRVFYFMTDKD 379
Query: 203 VVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHD 262
VSW MI G G F +A+ ++ M+ + P T++++L++CA ++G IH
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHG 439
Query: 263 FIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALA-KSGE 321
+ G +L+V + AL+ +YA+ G + E ++FSS+ E + +WN++I LA + +S
Sbjct: 440 ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLP 499
Query: 322 EAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVE 367
EA+ F ++ G + + +T +VLSA + ++G+QI G ++
Sbjct: 500 EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK 545
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 148/342 (43%), Gaps = 21/342 (6%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLS--APC 150
+P + + ++ +S + H +L L M + I N Y F + ++
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLR---DMVKEGIFSNQYAFVSVLRACQEIGSV 118
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVY--AASPRLFSLCRQLFDEMTHRDVVSWTV 208
+ +H + KL + D V N L+ +Y ++LC F ++ ++ VSW
Sbjct: 119 GILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALC--AFGDIEVKNSVSWNS 176
Query: 209 MIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALA-ACA-DSGAVEMGAWIHDFIRR 266
+I + AG A F MQY G P T + + AC+ V + I I++
Sbjct: 177 IISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 267 NGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRL 326
+G D+ +G+ L+ +AK G + +VF+ ++ +N T N ++ GL K GEEA +L
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 327 FNRMEQ--DGVRADEVTLLAVL---SACNHSGLVDMGRQIFGFLV-EGKYGFIPNVKHYA 380
F M D V LL+ S GL GR++ G ++ G F+ + +
Sbjct: 297 FMDMNSMIDVSPESYVILLSSFPEYSLAEEVGL-KKGREVHGHVITTGLVDFMVGIGN-- 353
Query: 381 CMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+V++ A+ GS+ +A V M D W S++ G
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITGLDQNG 394
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 201/398 (50%), Gaps = 5/398 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P +++ + S+I F + N + +F M +TF + ++ +
Sbjct: 184 IPERNLYSYYSIISGFVN---FGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSI 240
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H LKLG + + +V L+ +Y+ + R F+ M + V+W +I G
Sbjct: 241 YVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIED-ARCAFECMPEKTTVAWNNVIAG 299
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G ++AL M+ +GV+ ++ T+ + +E+ H + RNG+E +
Sbjct: 300 YALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESE 359
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+V TAL+D Y+K GRV+ VF + KN+ +WNA++ G A G +A++LF +M
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA 419
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
V + VT LAVLSAC +SGL + G +IF + E +G P HYACM++LL R G L
Sbjct: 420 ANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSE-VHGIKPRAMHYACMIELLGRDGLL 478
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLY 452
EA +R P T MW +LL + + Q +LE VA KL + P YV + N+Y
Sbjct: 479 DEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMY 538
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
MG+ + V ++ + L+ C+ VEV +Q H+
Sbjct: 539 NSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHS 576
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 3/248 (1%)
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
+ V+ ++ G + Y+ N +L ++ + R+LFDE+ R++ S+ +I GF N
Sbjct: 143 KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIID-ARRLFDEIPERNLYSYYSIISGFVN 201
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
G + +A F+ M T L A A G++ +G +H + G + +
Sbjct: 202 FGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFV 261
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
LIDMY+KCG +E+ F + EK WN VI G AL EEA+ L M GV
Sbjct: 262 SCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGV 321
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
D+ TL ++ +++ +Q L+ + GF + +VD ++ G + A
Sbjct: 322 SIDQFTLSIMIRISTKLAKLELTKQAHASLI--RNGFESEIVANTALVDFYSKWGRVDTA 379
Query: 396 FEVMRCMP 403
V +P
Sbjct: 380 RYVFDKLP 387
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 4/199 (2%)
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALA-ACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
+F +A FE ++ V+ +AL AC ++ ++ F+ NG+E + +
Sbjct: 102 RFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
++ M+ KCG + + R+F + E+N++++ ++I G + EA LF M ++
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
+ T +L A G + +G+Q+ + K G + N ++D+ ++ G + +A
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQL--HVCALKLGVVDNTFVSCGLIDMYSKCGDIEDAR 279
Query: 397 EVMRCMPFDPTKAMWGSLL 415
CMP + T W +++
Sbjct: 280 CAFECMP-EKTTVAWNNVI 297
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 188/334 (56%), Gaps = 12/334 (3%)
Query: 163 LKLG-HLHDIYVHNSLLGVYAASPRL---FSLCRQL------FDEMTHRDVVSWTVMIMG 212
++LG +H + +H+S G+ L +S C+ L F + + +W +I G
Sbjct: 296 IRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISG 355
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFI-RRNGWEL 271
+ K ++A +M AG PN +T+ + L CA ++ G H +I RR ++
Sbjct: 356 YAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKD 415
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+L +L+D+YAK G++ +V + +++ T+ ++I G G A+ LF M
Sbjct: 416 YTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMT 475
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ G++ D VT++AVLSAC+HS LV G ++F ++ +YG P ++H++CMVDL R+G
Sbjct: 476 RSGIKPDHVTVVAVLSACSHSKLVHEGERLF-MKMQCEYGIRPCLQHFSCMVDLYGRAGF 534
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNL 451
L +A +++ MP+ P+ A W +LL + G+ + ++ A KL+E++P N YYV ++N+
Sbjct: 535 LAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANM 594
Query: 452 YAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVE 485
YA G W + +VR +M+D + KD GC+ ++ +
Sbjct: 595 YAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTD 628
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 151/339 (44%), Gaps = 40/339 (11%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
++ + M I P+ +T+P + K+ A + VH + + +YV N+L+ +
Sbjct: 129 IAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISM 188
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
Y R + R+LFD M RD VSW +I + + G + +A F++M ++GV + +T
Sbjct: 189 YK-RFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVIT 247
Query: 241 -----------------------------------MVNALAACADSGAVEMGAWIHDFIR 265
M+ L AC+ GA+ +G IH
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 266 RNGWE-LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAI 324
+ ++ +D V T LI MY+KC + + VF +E ++ TWN++I G A EEA
Sbjct: 308 HSSYDGIDNVRNT-LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEAS 366
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD 384
L M G + + +TL ++L C + G++ +++ K F + +VD
Sbjct: 367 HLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKC-FKDYTMLWNSLVD 425
Query: 385 LLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGD 423
+ A+SG + A +V M + + SL+ +QG+
Sbjct: 426 VYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGE 463
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 142/344 (41%), Gaps = 53/344 (15%)
Query: 100 IFNSLIRAFSHSHHHHN----SLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
+F SL SH H H SL L + + + +L H L + A
Sbjct: 6 LFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVL--HSAASLLSACVDVRAFLAGV 63
Query: 156 QSVHAHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVV---SWTVMIM 211
Q VHAH + G H + V L+ Y+A F+L + + + D++ W V+I
Sbjct: 64 Q-VHAHCISSGVEYHSVLVPK-LVTFYSA----FNLHNEAQSIIENSDILHPLPWNVLIA 117
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ F++ + A+++M G+ P+ T + L AC ++ V G +H I + ++
Sbjct: 118 SYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKS 177
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+ + ALI MY + + R+F + E++ +WNAVI A EA LF++M
Sbjct: 178 SLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMW 237
Query: 332 QDGVRA-----------------------------------DEVTLLAVLSACNHSGLVD 356
GV D V ++ L AC+ G +
Sbjct: 238 FSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIR 297
Query: 357 MGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
+G++I G + Y I NV++ ++ + ++ LR A V R
Sbjct: 298 LGKEIHGLAIHSSYDGIDNVRN--TLITMYSKCKDLRHALIVFR 339
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 82/216 (37%), Gaps = 18/216 (8%)
Query: 217 GKFDDALLAFE--QMQYAGVAPNRVTMVNA---LAACADSGAVEMGAWIHDFIRRNGWEL 271
G DA F ++Q + + + + +A L+AC D A G +H +G E
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEY 76
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
VL L+ Y+ E + + + WN +I A + EE I + RM
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMV 136
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC-----MVDLL 386
G+R D T +VL AC + V GR + G + Y Y C M
Sbjct: 137 SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSY----KSSLYVCNALISMYKRF 192
Query: 387 ARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
G R F+ M F+ W +++ S+G
Sbjct: 193 RNMGIARRLFDRM----FERDAVSWNAVINCYASEG 224
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 187/342 (54%), Gaps = 3/342 (0%)
Query: 146 LSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVS 205
L A + H L L + +NSLL Y S + LF EM+ D+ +
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGS-HDDAQMLFTEMSTTDLTT 535
Query: 206 WTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIR 265
W++M+ + + ++A+ F ++Q G+ PN VT++N L CA ++ + H +I
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYII 595
Query: 266 RNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIR 325
R G D+ L L+D+YAKCG ++ VF S +++ + A++ G A+ G+EA+
Sbjct: 596 RGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALM 654
Query: 326 LFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
+++ M + ++ D V + +L+AC H+GL+ G QI+ + +G P ++ YAC VDL
Sbjct: 655 IYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDS-IRTVHGMKPTMEQYACAVDL 713
Query: 386 LARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYY 445
+AR G L +A+ + MP +P +WG+LL + + ++ VA L++ E ++ +
Sbjct: 714 IARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNH 773
Query: 446 VHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
V +SN+YA +W+ V ++R +MK +++ K GCS +EV+ Q
Sbjct: 774 VLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQ 815
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 20/271 (7%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+S+H++++K G D V N+L+ +YA +F FD + +DVVSW +I GF
Sbjct: 140 NGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGF 199
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSG---AVEMGAWIHDFIRRNGW- 269
DA +F M PN T+ N L CA A G IH ++ + W
Sbjct: 200 SENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
+ V + +L+ Y + GR+EE +F+ + K++ +WN VI G A +A +LF+
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 330 MEQDG-VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
+ G V D VT++++L C + G++I +++ Y + + ++ AR
Sbjct: 320 LVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSY-LLEDTSVGNALISFYAR 378
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSK 419
G D + A W L+S+K
Sbjct: 379 FG--------------DTSAAYWAFSLMSTK 395
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 18/271 (6%)
Query: 135 NHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQL 194
+H F + K+ ++ +++H V KLGH+ V S+L +YA R+ C+++
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD-CQKM 78
Query: 195 FDEMTHRDVVSWTVMIMGFR-NAGKFDDALLAFEQMQYAG-VAPNRVTMVNALAACADSG 252
F +M D V W +++ G + G+ + + F+ M +A P+ VT L C G
Sbjct: 79 FRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
Query: 253 AVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRV-EEGVRVFSSVKEKNVFTWNAVI 311
G +H +I + G E D ++G AL+ MYAK G + + F + +K+V +WNA+I
Sbjct: 137 DSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 312 KGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSAC---NHSGLVDMGRQIFGFLVEG 368
G + +A R F M ++ + T+ VL C + + GRQI ++V+
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQR 256
Query: 369 KY----GFIPNVKHYACMVDLLARSGSLREA 395
+ F+ N +V R G + EA
Sbjct: 257 SWLQTHVFVCN-----SLVSFYLRVGRIEEA 282
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 169/366 (46%), Gaps = 18/366 (4%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLF---KSLSAPCHFAQ 154
V +N++I FS ++ ++ F M + PN+ T + S+
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRS---FCLMLKEPTEPNYATIANVLPVCASMDKNIACRS 245
Query: 155 AQSVHAHVLKLGHLHD-IYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+ +H++V++ L ++V NSL+ Y R+ LF M +D+VSW V+I G+
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRI-EEAASLFTRMGSKDLVSWNVVIAGY 304
Query: 214 RNAGKFDDALLAFEQMQYAG-VAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL- 271
+ ++ A F + + G V+P+ VT+++ L CA + G IH +I R+ + L
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
D +G ALI YA+ G FS + K++ +WNA++ A + + + L + +
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLL 424
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFI---PNVKHYACMVDLLAR 388
+ + D VT+L++L C + + +++ G+ V K G + K ++D A+
Sbjct: 425 NEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSV--KAGLLHDEEEPKLGNALLDAYAK 482
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHL 448
G++ A ++ + T + SLL + G + ++ + E+ + + +
Sbjct: 483 CGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQML---FTEMSTTDLTTWSLM 539
Query: 449 SNLYAE 454
+YAE
Sbjct: 540 VRIYAE 545
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 232 AGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEE 291
+G + ++ + ACA + G +H + + G + ++++MYAKC R+++
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 292 GVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME-QDGVRADEVTLLAVLSACN 350
++F + + WN V+ GL+++ G E +R F M D + VT VL C
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCV 133
Query: 351 HSGLVDMGRQIFGFLVEG 368
G G+ + ++++
Sbjct: 134 RLGDSYNGKSMHSYIIKA 151
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 195/374 (52%), Gaps = 6/374 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P P + ++N +I + + ++ H PN YT L L P
Sbjct: 167 IPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ---PNCYTMVALTSGLIDPSLL 223
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
A SVHA LK+ YV +L+ +Y+ + S C +F+ ++ D+V+ + +I G
Sbjct: 224 LVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC-SVFNSISEPDLVACSSLITG 282
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ G +AL F +++ +G P+ V + L +CA+ G +H ++ R G ELD
Sbjct: 283 YSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELD 342
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ + +ALIDMY+KCG ++ + +F+ + EKN+ ++N++I GL L A F + +
Sbjct: 343 IKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILE 402
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
G+ DE+T A+L C HSGL++ G++IF + + ++G P +HY MV L+ +G L
Sbjct: 403 MGLIPDEITFSALLCTCCHSGLLNKGQEIFERM-KSEFGIEPQTEHYVYMVKLMGMAGKL 461
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKL-VELEPANSAYYVHLSNL 451
EAFE + + + G+LL + + +E VA + E S Y V LSN+
Sbjct: 462 EEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNV 521
Query: 452 YAEMGRWDDVEKVR 465
YA GRWD+VE++R
Sbjct: 522 YARYGRWDEVERLR 535
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 152/310 (49%), Gaps = 6/310 (1%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P VF++NS+IRA++ +H T LS+F+ + R+ P+++T+ L + S
Sbjct: 67 PERSVFLWNSIIRAYAKAHQFT---TVLSLFSQILRSDTRPDNFTYACLARGFSESFDTK 123
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+ +H + G D ++++ Y+ + L +LF + D+ W VMI+G+
Sbjct: 124 GLRCIHGIAIVSGLGFDQICGSAIVKAYSKAG-LIVEASKLFCSIPDPDLALWNVMILGY 182
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
G +D + F MQ+ G PN TMV + D + + +H F + +
Sbjct: 183 GCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS 242
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
+G AL++MY++C + VF+S+ E ++ +++I G + + +EA+ LF +
Sbjct: 243 YVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS 302
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
G + D V + VL +C G+++ +++ + G ++K + ++D+ ++ G L+
Sbjct: 303 GKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVI--RLGLELDIKVCSALIDMYSKCGLLK 360
Query: 394 EAFEVMRCMP 403
A + +P
Sbjct: 361 CAMSLFAGIP 370
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
Q +H+ V K D Y L YA + L S R+LFD R V W +I +
Sbjct: 23 NTQKLHSFVTKSKLARDPYFATQLARFYALNDDLIS-ARKLFDVFPERSVFLWNSIIRAY 81
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
A +F L F Q+ + P+ T ++S + IH +G D
Sbjct: 82 AKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQ 141
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
+ G+A++ Y+K G + E ++F S+ + ++ WN +I G ++ I LFN M+
Sbjct: 142 ICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHR 201
Query: 334 GVRADEVTLLAVLSACNHSGLVD 356
G + + T++A+ SGL+D
Sbjct: 202 GHQPNCYTMVAL-----TSGLID 219
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 260 IHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKS 319
+H F+ ++ D T L YA + ++F E++VF WN++I+ A A
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQ 86
Query: 320 GEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHY 379
+ LF+++ + R D T + + S R I G + GF +
Sbjct: 87 FTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGF--DQICG 144
Query: 380 ACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLV 416
+ +V +++G + EA ++ +P DP A+W +++
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMIL 180
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 199/387 (51%), Gaps = 35/387 (9%)
Query: 134 PNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQ 193
P+ + F L K+ + + VH H + + +D V +SL+ +YA L S +
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNS-AKA 161
Query: 194 LFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQ----------------------- 230
+FD + ++ +SWT M+ G+ +G+ ++AL F +
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 231 ---YAGVAPNRVTMVNAL------AACADSGAVEMGAWIHDFIRRNGWELDVVLGTALID 281
+ + RV +++ L ACA+ A G +H + G++ V + ALID
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281
Query: 282 MYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVT 341
MYAKC V +FS ++ ++V +W ++I G+A E+A+ L++ M GV+ +EVT
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 342 LLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRC 401
+ ++ AC+H G V+ GR++F + + YG P+++HY C++DLL RSG L EA ++
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTK-DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 402 MPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLV-ELEPANSAYYVHLSNLYAEMGRWDD 460
MPF P + W +LL + K QG + +A LV + + + Y+ LSN+YA W
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGK 460
Query: 461 VEKVRGMMKDRQLTKDLGCSSVEVEEQ 487
V + R + + ++ KD G SSVEV ++
Sbjct: 461 VSEARRKLGEMEVRKDPGHSSVEVRKE 487
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 164/366 (44%), Gaps = 53/366 (14%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVY----AASPRLFSLCRQLFDEMTHRDVVSWT 207
A+++HAH++KLG + + N+L+ VY AAS L Q+FDEM HRD ++W
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHAL-----QVFDEMPHRDHIAWA 73
Query: 208 VMIMGFRNAGKFDDAL-LAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRR 266
++ A L + +G+ P+ + ACA+ G+++ G +H
Sbjct: 74 SVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIV 133
Query: 267 NGWELDVVLGTALIDMYAKC-------------------------------GRVEEGVRV 295
+ + D V+ ++L+DMYAKC GR EE + +
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALEL 193
Query: 296 FSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA-DEVTLLAVLSACNHSGL 354
F + KN+++W A+I G + G EA +F M ++ V D + L +++ AC +
Sbjct: 194 FRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAA 253
Query: 355 VDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSL 414
GRQ+ G ++ GF V ++D+ A+ + A ++ M + W SL
Sbjct: 254 SIAGRQVHGLVI--ALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS-WTSL 310
Query: 415 LVSSKSQGDLEFSEFVARKLVE--LEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQ 472
+V G E + + +V ++P N +V L + +G VEK R + +
Sbjct: 311 IVGMAQHGQAEKALALYDDMVSHGVKP-NEVTFVGLIYACSHVGF---VEKGRELFQ--S 364
Query: 473 LTKDLG 478
+TKD G
Sbjct: 365 MTKDYG 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 6/186 (3%)
Query: 245 LAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNV 304
L CA + + +H I + G L L+++Y KCG ++VF + ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 305 FTWNAVIKGLALAK-SGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFG 363
W +V+ L A SG+ + G+R D+ A++ AC + G +D GRQ+
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 364 FLVEGKYGFIPNVKHYACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKS 420
+ +Y VK + +VD+ A+ G L A F+ +R AM S +
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRK 187
Query: 421 QGDLEF 426
+ LE
Sbjct: 188 EEALEL 193
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 199/368 (54%), Gaps = 2/368 (0%)
Query: 123 IFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYA 182
+ M + + PN T + ++ S H + +HA++L+ ++ V NSL+ YA
Sbjct: 414 LLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYA 473
Query: 183 ASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
+S R + M RD +++T ++ F GK + AL M G+ +++++
Sbjct: 474 SS-RKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLP 532
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK 302
++A A+ GA+E G +H + ++G+ + +L+DMY+KCG +E+ +VF +
Sbjct: 533 GFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP 592
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
+V +WN ++ GLA A+ F M D VT L +LSAC++ L D+G + F
Sbjct: 593 DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYF 652
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+++ Y P V+HY +V +L R+G L EA V+ M P ++ +LL + + +G
Sbjct: 653 Q-VMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRG 711
Query: 423 DLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
+L E +A K + L P++ A Y+ L++LY E G+ + +K R +M +++L+K LG S+V
Sbjct: 712 NLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTV 771
Query: 483 EVEEQGHT 490
EV+ + H+
Sbjct: 772 EVQGKVHS 779
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 170/348 (48%), Gaps = 17/348 (4%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
VF + +I AF+ S ++L S+F M + PN +TF + +S + +
Sbjct: 89 VFAWTVMISAFTKSQEFASAL---SLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGR 145
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VH V+K G + V +SL +Y+ + C +LF + + D +SWT+MI A
Sbjct: 146 VHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEAC-ELFSSLQNADTISWTMMISSLVGAR 204
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
K+ +AL + +M AGV PN T V L A + G +E G IH I G L+VVL T
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKT 263
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
+L+D Y++ ++E+ VRV +S E++VF W +V+ G +EA+ F M G++
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR-SGSLREAF 396
+ T A+LS C+ +D G+QI + K GF + +VD+ + S S EA
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTI--KVGFEDSTDVGNALVDMYMKCSASEVEAS 381
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLE-----FSEFVARKLVELEP 439
V M P W +L++ G ++ E V R E+EP
Sbjct: 382 RVFGAM-VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR---EVEP 425
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 138/244 (56%), Gaps = 8/244 (3%)
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
+H V+K G L ++ + N+LL +Y + +++ R+LFDEM+HR V +WTVMI F +
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWN-ARKLFDEMSHRTVFAWTVMISAFTKSQ 103
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
+F AL FE+M +G PN T + + +CA + G +H + + G+E + V+G+
Sbjct: 104 EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGS 163
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
+L D+Y+KCG+ +E +FSS++ + +W +I L A+ EA++ ++ M + GV
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIF-GFLVEGKYGFIP-NVKHYACMVDLLARSGSLREA 395
+E T + +L A + GL + G+ I +V G IP NV +VD ++ + +A
Sbjct: 224 NEFTFVKLLGASSFLGL-EFGKTIHSNIIVRG----IPLNVVLKTSLVDFYSQFSKMEDA 278
Query: 396 FEVM 399
V+
Sbjct: 279 VRVL 282
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 162/354 (45%), Gaps = 8/354 (2%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
VF++ S++ F + ++ F M + PN++T+ + SA +
Sbjct: 290 VFLWTSVVSGFVRNLRAKEAV---GTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQ 346
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
+H+ +K+G V N+L+ +Y ++F M +VVSWT +I+G + G
Sbjct: 347 IHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHG 406
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
D +M V PN VT+ L AC+ V IH ++ R + ++V+G
Sbjct: 407 FVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGN 466
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
+L+D YA +V+ V S+K ++ T+ +++ E A+ + N M DG+R
Sbjct: 467 SLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRM 526
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D+++L +SA + G ++ G+ + + V K GF +VD+ ++ GSL +A +
Sbjct: 527 DQLSLPGFISASANLGALETGKHLHCYSV--KSGFSGAASVLNSLVDMYSKCGSLEDAKK 584
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQGDLE--FSEFVARKLVELEPANSAYYVHLS 449
V + P W L+ S G + S F ++ E EP + + + LS
Sbjct: 585 VFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 242 VNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE 301
+ L+ C +S + +G IH + + G ++ L L+ +Y K + ++F +
Sbjct: 28 IRILSFC-ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 302 KNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDM--GR 359
+ VF W +I ++ A+ LF M G +E T +V+ +C +GL D+ G
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC--AGLRDISYGG 144
Query: 360 QIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA---MWGSLLV 416
++ G ++ K GF N + + DL ++ G +EA E+ + T + M SL+
Sbjct: 145 RVHGSVI--KTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVG 202
Query: 417 SSKSQGDLEF-SEFVARKLVELEPANSAYYVHL 448
+ K + L+F SE V + P N +V L
Sbjct: 203 ARKWREALQFYSEMVKAGV----PPNEFTFVKL 231
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 207/421 (49%), Gaps = 36/421 (8%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+N+LI ++ + + +L + M N + + ++F + LS+ + VHA
Sbjct: 228 WNTLIAGYAQNGYEEEAL---KMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 161 HVLKLGHLHDIYVHNSLLGVY----------------------AASPRLFSLCRQ----- 193
VLK G + +V + ++ VY +AS + Q
Sbjct: 285 RVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVE 344
Query: 194 ---LFDEMTHRDVVSWTVMIMGFRNAGKFDDAL-LAFEQMQYAGVAPNRVTMVNALAACA 249
LFD ++ +++V WT M +G+ N + D L LA + P+ + MV+ L AC+
Sbjct: 345 AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACS 404
Query: 250 DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA 309
+E G IH R G +D L TA +DMY+KCG VE R+F S E++ +NA
Sbjct: 405 LQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNA 464
Query: 310 VIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK 369
+I G A ++ + F M + G + DE+T +A+LSAC H GLV G + F ++E
Sbjct: 465 MIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEA- 523
Query: 370 YGFIPNVKHYACMVDLLARSGSLREAFEVMRCMP-FDPTKAMWGSLLVSSKSQGDLEFSE 428
Y P HY CM+DL ++ L +A E+M + + + G+ L + + E +
Sbjct: 524 YNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVK 583
Query: 429 FVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQG 488
V KL+ +E +N + Y+ ++N YA GRWD+++++R M+ ++L GCS +++Q
Sbjct: 584 EVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQF 643
Query: 489 H 489
H
Sbjct: 644 H 644
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/395 (17%), Positives = 154/395 (38%), Gaps = 77/395 (19%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHR---NTILPNHYTFPFLFKSLSAPCHFAQ 154
+ +N+L+ F+ + + + +F MHR + I + +T + K + +
Sbjct: 86 LITYNTLLSGFAKTDGCESE--AIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCR-------QLFDEMTHR------ 201
+ +H ++K G+ + +SL+ +Y+ + +C + D +
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 202 --------------------DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTM 241
D +SW +I G+ G ++AL M+ G+ + +
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 242 VNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVE----------- 290
L + ++++G +H + +NG + + + ++D+Y KCG ++
Sbjct: 264 GAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGF 323
Query: 291 --------------------EGVRVFSSVKEKNVFTWNAVIKG---LALAKSGEEAIRLF 327
E R+F S+ EKN+ W A+ G L S E R F
Sbjct: 324 GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF 383
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA 387
E + D + +++VL AC+ ++ G++I G + + G + + K VD+ +
Sbjct: 384 IANETN--TPDSLVMVSVLGACSLQAYMEPGKEIHGHSL--RTGILMDKKLVTAFVDMYS 439
Query: 388 RSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+ G++ A + F+ M+ +++ G
Sbjct: 440 KCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHG 473
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 135/339 (39%), Gaps = 80/339 (23%)
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK 218
H +K G N L+ +Y+ S L R +FDEM R+V SW +I + K
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSG-LLREARNVFDEMLERNVYSWNAVIAAYV---K 66
Query: 219 FDDALLAFEQMQYAGVAPNRVTMVNALAACA-----DSGAVEM----------GAWIHDF 263
F++ A E + + +T L+ A +S A+EM WI DF
Sbjct: 67 FNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 264 IRRN-------------GWELDVVL------GT-----ALIDMYAKCGRVEEGVRVFSSV 299
G +L VL GT +LI MY+KCG+ +E +F+
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGS 186
Query: 300 ------------------------KEKNVF----------TWNAVIKGLALAKSGEEAIR 325
K +VF +WN +I G A EEA++
Sbjct: 187 CVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALK 246
Query: 326 LFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
+ ME++G++ DE + AVL+ + + +G+++ ++ K G N + +VD+
Sbjct: 247 MAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVL--KNGSYSNKFVSSGIVDV 304
Query: 386 LARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDL 424
+ G+++ A F + S++V SQG +
Sbjct: 305 YCKCGNMKYAESAHLLYGFGNLYSA-SSMIVGYSSQGKM 342
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 194/368 (52%), Gaps = 5/368 (1%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V ++NS++ F + + +L + ++++ + + YT K +
Sbjct: 307 VAVWNSMLSGFLINEENEAALW---LLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VH+ V+ G+ D V + L+ ++A + +LF + ++D+++++ +I G +G
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQD-AHKLFHRLPNKDIIAFSGLIRGCVKSG 422
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
A F ++ G+ ++ + N L C+ ++ G IH + G+E + V T
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTAT 482
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
AL+DMY KCG ++ GV +F + E++V +W +I G EEA R F++M G+
Sbjct: 483 ALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEP 542
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
++VT L +LSAC HSGL++ R + + +YG P ++HY C+VDLL ++G +EA E
Sbjct: 543 NKVTFLGLLSACRHSGLLEEARSTLETM-KSEYGLEPYLEHYYCVVDLLGQAGLFQEANE 601
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGR 457
++ MP +P K +W SLL + + + +A KL++ P + + Y LSN YA +G
Sbjct: 602 LINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGM 661
Query: 458 WDDVEKVR 465
WD + KVR
Sbjct: 662 WDQLSKVR 669
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 146/298 (48%), Gaps = 38/298 (12%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
F + +S+ AHV+K G ++++ N+++ +Y RL S ++FDEM+ R++V+WT M+
Sbjct: 21 FKRGESIQAHVIKQGISQNVFIANNVISMYV-DFRLLSDAHKVFDEMSERNIVTWTTMVS 79
Query: 212 GFRNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G+ + GK + A+ + +M A N L AC G +++G +++ I +
Sbjct: 80 GYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLR 139
Query: 271 LDVVLGTALIDMYAKCGRV-------------------------------EEGVRVFSSV 299
DVVL +++DMY K GR+ +E V +F +
Sbjct: 140 GDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM 199
Query: 300 KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGR 359
+ NV +WN +I G + K A+ RM+++G+ D L L AC+ GL+ MG+
Sbjct: 200 PQPNVVSWNCLISGF-VDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGK 258
Query: 360 QIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVM--RCMPFDPTKAMWGSLL 415
Q+ +V K G + + ++D+ + GSL A +V + + + A+W S+L
Sbjct: 259 QLHCCVV--KSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 123/266 (46%), Gaps = 8/266 (3%)
Query: 175 NSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGV 234
N+L+ Y + L LF M +VVSW +I GF + G AL +MQ G+
Sbjct: 177 NTLISGYCKAG-LMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGL 234
Query: 235 APNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVR 294
+ + L AC+ G + MG +H + ++G E +ALIDMY+ CG +
Sbjct: 235 VLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAAD 294
Query: 295 VFSSVK---EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNH 351
VF K +V WN+++ G + + E A+ L ++ Q + D TL L C +
Sbjct: 295 VFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICIN 354
Query: 352 SGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMW 411
+ +G Q+ +V Y V + +VDL A G++++A ++ +P A
Sbjct: 355 YVNLRLGLQVHSLVVVSGYELDYIVG--SILVDLHANVGNIQDAHKLFHRLPNKDIIAFS 412
Query: 412 GSLLVSSKSQGDLEFSEFVARKLVEL 437
G + KS G + ++ R+L++L
Sbjct: 413 GLIRGCVKS-GFNSLAFYLFRELIKL 437
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 248 CADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTW 307
C A + G I + + G +V + +I MY + + +VF + E+N+ TW
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 308 NAVIKGLALAKSGEEAIRLFNRM-EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
++ G +AI L+ RM + + A+E AVL AC G + +G ++ +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI- 133
Query: 367 EGKYGFIPNVKHYACMVDLLARSGSLREA----FEVMRCMPFDPTKAMWGSLL 415
GK +V +VD+ ++G L EA E++R P+ W +L+
Sbjct: 134 -GKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILR-----PSSTSWNTLI 180
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 191/357 (53%), Gaps = 8/357 (2%)
Query: 119 TPLSIFAHMHRNTILPNHYTFPFLFK-SLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSL 177
T S+F M P+ +TF L + S+ C +H +KLG + SL
Sbjct: 197 TSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKC-LEIVSELHGLAIKLGFGRSSALIRSL 255
Query: 178 LGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK-FDDALLAFEQMQYAGVAP 236
+ Y L + + L + RD++S T +I GF DA F+ M
Sbjct: 256 VNAYVKCGSLANAWK-LHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 314
Query: 237 NRVTMVNALAACADSGAVEMGAWIHDF-IRRNGWELDVVLGTALIDMYAKCGRVEEGVRV 295
+ V + + L C +V +G IH F ++ + DV LG +LIDMYAK G +E+ V
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLA 374
Query: 296 FSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLV 355
F +KEK+V +W ++I G + E+AI L+NRME + ++ ++VT L++LSAC+H+G
Sbjct: 375 FEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQT 434
Query: 356 DMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMP--FDPTKAMWGS 413
++G +I+ ++ K+G +H +C++D+LARSG L EA+ ++R + + WG+
Sbjct: 435 ELGWKIYDTMIN-KHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGA 493
Query: 414 LLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKD 470
L + + G+++ S+ A +L+ +EP Y++L+++YA G WD+ R +MK+
Sbjct: 494 FLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKE 550
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 7/269 (2%)
Query: 134 PNHYTFPFLFKSLSAPCHFAQAQS----VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFS 189
N+ P L+ C + + +H + + G ++ + + L+ +Y +
Sbjct: 6 ENYLLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDV-K 64
Query: 190 LCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACA 249
R+LFD ++ RDVVSWT MI F G DALL F++M V N+ T + L +C
Sbjct: 65 HARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCK 124
Query: 250 DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA 309
D G ++ G IH + + ++++ +AL+ +YA+CG++EE F S+KE+++ +WNA
Sbjct: 125 DLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNA 184
Query: 310 VIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGK 369
+I G + + LF M +G + D T ++L A +++ ++ G + K
Sbjct: 185 MIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAI--K 242
Query: 370 YGFIPNVKHYACMVDLLARSGSLREAFEV 398
GF + +V+ + GSL A+++
Sbjct: 243 LGFGRSSALIRSLVNAYVKCGSLANAWKL 271
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 152/335 (45%), Gaps = 9/335 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+ + V + ++I FS +H ++L +F MHR + N +T+ + KS
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALL---LFKEMHREDVKANQFTYGSVLKSCKDLGCL 129
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H V K ++ V ++LL +YA ++ R FD M RD+VSW MI G
Sbjct: 130 KEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEE-ARLQFDSMKERDLVSWNAMIDG 188
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ D + F+ M G P+ T + L A +E+ + +H + G+
Sbjct: 189 YTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRS 248
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKS-GEEAIRLFNRME 331
L +L++ Y KCG + ++ K++++ + A+I G + + +A +F M
Sbjct: 249 SALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGF-LVEGKYGFIPNVKHYACMVDLLARSG 390
+ + DEV + ++L C V +GRQI GF L + F +V ++D+ A+SG
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRF--DVALGNSLIDMYAKSG 366
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
+ +A M ++ W SL+ G+ E
Sbjct: 367 EIEDAVLAFEEMKEKDVRS-WTSLIAGYGRHGNFE 400
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 199/402 (49%), Gaps = 7/402 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P ++ +N+ I S+S + F R PN TF + S H
Sbjct: 169 IPERNLETWNAFI---SNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 225
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+H VL+ G D+ V N L+ Y ++ S +F EM ++ VSW ++
Sbjct: 226 NLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS-SEIIFTEMGTKNAVSWCSLVAA 284
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
+ + + A + + + + V + + + L+ACA +E+G IH + E
Sbjct: 285 YVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERT 344
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+ +G+AL+DMY KCG +E+ + F + EKN+ T N++I G A + A+ LF M
Sbjct: 345 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAP 404
Query: 333 DGV--RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
G + +T +++LSAC+ +G V+ G +IF + YG P +HY+C+VD+L R+G
Sbjct: 405 RGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM-RSTYGIEPGAEHYSCIVDMLGRAG 463
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSN 450
+ A+E ++ MP PT ++WG+L + + G + A L +L+P +S +V LSN
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSN 523
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHTSQ 492
+A GRW + VR +K + K G S + V+ Q H Q
Sbjct: 524 TFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQ 565
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 173/373 (46%), Gaps = 13/373 (3%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
P +V + SLI + + H +L F M R ++PN +TFP FK++++
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVE---FFEMRREGVVPNDFTFPCAFKAVASLRLP 124
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +HA +K G + D++V S +Y + RL R+LFDE+ R++ +W I
Sbjct: 125 VTGKQIHALAVKCGRILDVFVGCSAFDMYCKT-RLRDDARKLFDEIPERNLETWNAFISN 183
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
G+ +A+ AF + + PN +T L AC+D + +G +H + R+G++ D
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
V + LID Y KC ++ +F+ + KN +W +++ E+A L+ R +
Sbjct: 244 VSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEG---KYGFIPNVKHYACMVDLLARS 389
D V + + +VLSAC +++GR I V+ + F+ + +VD+ +
Sbjct: 304 DIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA-----LVDMYGKC 358
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLS 449
G + ++ + MP + SL+ QG ++ + + ++ + Y+
Sbjct: 359 GCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFV 417
Query: 450 NLYAEMGRWDDVE 462
+L + R VE
Sbjct: 418 SLLSACSRAGAVE 430
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 195/400 (48%), Gaps = 4/400 (1%)
Query: 93 VPRPHVFIFNSLIRAFSHSHH--HHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPC 150
+P +V +N++I F S +F M R + P+ TF + K+ SA
Sbjct: 313 MPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAK 372
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ +HA + K D ++ ++L+ +YA Q F + +D+ SWT MI
Sbjct: 373 TLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTED-GMQCFASTSKQDIASWTSMI 431
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
+ + A F Q+ + + P T+ ++ACAD A+ G I + ++G +
Sbjct: 432 DCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGID 491
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
+ T+ I MYAK G + +VF V+ +V T++A+I LA S EA+ +F M
Sbjct: 492 AFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM 551
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
+ G++ ++ L VL AC H GLV G + F + + Y PN KH+ C+VDLL R+G
Sbjct: 552 KTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM-KNDYRINPNEKHFTCLVDLLGRTG 610
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSN 450
L +A ++ F W +LL S + D + VA +L+ELEP S YV L N
Sbjct: 611 RLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHN 670
Query: 451 LYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
+Y + G E+VR +M+DR + K+ S + + Q H+
Sbjct: 671 IYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHS 710
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 155/333 (46%), Gaps = 19/333 (5%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P ++ FNSLI ++ + ++ +F + + +T+ C
Sbjct: 108 MPERNIISFNSLISGYTQMGFYEQAM---ELFLEAREANLKLDKFTYAGALGFCGERCDL 164
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ +H V+ G +++ N L+ +Y+ +L LFD RD VSW +I G
Sbjct: 165 DLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKL-DQAMSLFDRCDERDQVSWNSLISG 223
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACA---DSGAVEMGAWIHDFIRRNGW 269
+ G ++ L +M G+ + + L AC + G +E G IH + + G
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGL-----ALAKSGEEAI 324
E D+V+ TAL+DMYAK G ++E +++FS + KNV T+NA+I G ++ EA
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD 384
+LF M++ G+ T VL AC+ + ++ GRQI + K F + + +++
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALIC--KNNFQSDEFIGSALIE 401
Query: 385 LLARSGSLREAFEVMRCMPFDPTK--AMWGSLL 415
L A GS + M+C + A W S++
Sbjct: 402 LYALMGSTEDG---MQCFASTSKQDIASWTSMI 431
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 142/278 (51%), Gaps = 7/278 (2%)
Query: 129 RNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLF 188
+NT L + + LF++ + + H H++K +Y+ N+LL +Y R
Sbjct: 41 KNTALDSE-GYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKC-REL 98
Query: 189 SLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAAC 248
RQLFD M R+++S+ +I G+ G ++ A+ F + + A + ++ T AL C
Sbjct: 99 GFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFC 158
Query: 249 ADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWN 308
+ +++G +H + NG V L LIDMY+KCG++++ + +F E++ +WN
Sbjct: 159 GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWN 218
Query: 309 AVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACN---HSGLVDMGRQIFGFL 365
++I G + EE + L +M +DG+ L +VL AC + G ++ G I +
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY- 277
Query: 366 VEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMP 403
K G ++ ++D+ A++GSL+EA ++ MP
Sbjct: 278 -TAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP 314
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 206/390 (52%), Gaps = 6/390 (1%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P++ +NS+I S + ++ M +T P+ YTF + + P F
Sbjct: 364 PNLVSWNSIISGCSENGFGEQAMLMYRRLLRM--STPRPDEYTFSAAISATAEPERFVHG 421
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
+ +H V KLG+ ++V +LL +Y + R +++FD M RDVV WT MI+G
Sbjct: 422 KLLHGQVTKLGYERSVFVGTTLLSMYFKN-REAESAQKVFDVMKERDVVLWTEMIVGHSR 480
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
G + A+ F +M + ++ + + AC+D + G H R G++ + +
Sbjct: 481 LGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSV 540
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
AL+DMY K G+ E +FS ++ WN+++ + E+A+ F ++ ++G
Sbjct: 541 CGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGF 600
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
D VT L++L+AC+H G G+ ++ + E G KHY+CMV+L++++G + EA
Sbjct: 601 MPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE--QGIKAGFKHYSCMVNLVSKAGLVDEA 658
Query: 396 FEVMRCMPFDPTKA-MWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAE 454
E++ P +A +W +LL + + +L+ + A ++++L+P ++A ++ LSNLYA
Sbjct: 659 LELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAV 718
Query: 455 MGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
GRW+DV ++R ++ +KD G S +EV
Sbjct: 719 NGRWEDVAEMRRKIRGLASSKDPGLSWIEV 748
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 163/342 (47%), Gaps = 19/342 (5%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P +V +N+L A+S + + PL+ HM + PN TF L + +
Sbjct: 158 MPHRNVVSYNALYSAYSRNPDFASYAFPLT--THMAFEYVKPNSSTFTSLVQVCAVLEDV 215
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
S+++ ++KLG+ ++ V S+LG+Y++ L S R++FD + +RD V+W MI+G
Sbjct: 216 LMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLES-ARRIFDCVNNRDAVAWNTMIVG 274
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
K +D L+ F M +GV P + T L C+ G+ +G IH I + D
Sbjct: 275 SLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLAD 334
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR-ME 331
+ L AL+DMY CG + E VF + N+ +WN++I G + GE+A+ ++ R +
Sbjct: 335 LPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLR 394
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
R DE T A +SA + R + G L+ G+ + + LL+
Sbjct: 395 MSTPRPDEYTFSAAISAT-----AEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFK 449
Query: 392 LREA------FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS 427
REA F+VM+ + +W ++V G+ E +
Sbjct: 450 NREAESAQKVFDVMK----ERDVVLWTEMIVGHSRLGNSELA 487
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 105/264 (39%), Gaps = 14/264 (5%)
Query: 172 YVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDD------ALLA 225
Y +N+L+ +Y L R++FD+M R++V+ + F L +
Sbjct: 23 YANNNLISMYVRCSSL-EQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 226 FEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV---VLGTALIDM 282
F+ + + + ++V C ++ IH + G LI M
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 283 YAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKS-GEEAIRLFNRMEQDGVRADEVT 341
Y +CG +E+ +VF + +NV ++NA+ + A L M + V+ + T
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 342 LLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRC 401
+++ C V MG + ++ K G+ NV ++ + + G L A + C
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQII--KLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 402 MPFDPTKAMWGSLLVSSKSQGDLE 425
+ + W +++V S +E
Sbjct: 260 VN-NRDAVAWNTMIVGSLKNDKIE 282
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 170/286 (59%), Gaps = 5/286 (1%)
Query: 192 RQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAACAD 250
R++FD+ +D+ SW MI G+ + AL F +M + V P+ +TMV+ +A +
Sbjct: 391 REVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISS 450
Query: 251 SGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVF---SSVKEKNVFTW 307
G++E G HD++ + + L A+IDMYAKCG +E + +F ++ + W
Sbjct: 451 LGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPW 510
Query: 308 NAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVE 367
NA+I G A + A+ L++ ++ ++ + +T + VLSAC H+GLV++G+ F + +
Sbjct: 511 NAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESM-K 569
Query: 368 GKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS 427
+G P++KHY CMVDLL ++G L EA E+++ MP +WG LL +S++ G++E +
Sbjct: 570 SDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIA 629
Query: 428 EFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQL 473
E A +L ++P++ V LSN+YA+ GRW+DV VR M+ R +
Sbjct: 630 ELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDV 675
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 171/405 (42%), Gaps = 91/405 (22%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + +LI+ ++ ++ ++ +F M I+ N T + + S
Sbjct: 133 MPERSCVSYTTLIKGYAQNNQWSEAM---ELFREMRNLGIMLNEVTLATVISACSHLGGI 189
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLC----RQLFDEMTHRDVVSWTV 208
+ + + +KL ++V +LL +Y LC R+LFDEM R++V+W V
Sbjct: 190 WDCRMLQSLAIKLKLEGRVFVSTNLLHMYC-----LCLCLKDARKLFDEMPERNLVTWNV 244
Query: 209 MIMGFRNAG-------------------------------KFDDALLAFEQMQYAGVAPN 237
M+ G+ AG + D+AL+ + +M G+ P+
Sbjct: 245 MLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 304
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL----------------DVVLG----- 276
V MV+ L+A A S G +H I + G++ D+ L
Sbjct: 305 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE 364
Query: 277 ----------TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRL 326
ALI + K G VE+ VF +K++F+WNA+I G A + S + A+ L
Sbjct: 365 ASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHL 424
Query: 327 FNRM-EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFI-PNVKHYACMVD 384
F M V+ D +T+++V SA + G ++ G++ +L + I PN A ++D
Sbjct: 425 FREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL---NFSTIPPNDNLTAAIID 481
Query: 385 LLARSGSLREAFEVMRCMPFDPTKAM-------WGSLLVSSKSQG 422
+ A+ GS+ A + F TK + W +++ S + G
Sbjct: 482 MYAKCGSIETALNI-----FHQTKNISSSTISPWNAIICGSATHG 521
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 15/247 (6%)
Query: 145 SLSAPCHF-AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDV 203
++ A C A A+SV KL D N ++ Y S RL+ + LFD M R
Sbjct: 84 NMYAKCRLLADAESVFRDHAKL----DSASFNIMVDGYVRSRRLWDALK-LFDVMPERSC 138
Query: 204 VSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDF 263
VS+T +I G+ ++ +A+ F +M+ G+ N VT+ ++AC+ G + +
Sbjct: 139 VSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSL 198
Query: 264 IRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEA 323
+ E V + T L+ MY C +++ ++F + E+N+ TWN ++ G + A E+A
Sbjct: 199 AIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQA 258
Query: 324 IRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMV 383
LF+++ + D V+ ++ C +D + ++ + G P+ MV
Sbjct: 259 EELFDQITE----KDIVSWGTMIDGCLRKNQLDEALVYYTEML--RCGMKPS---EVMMV 309
Query: 384 DLLARSG 390
DLL+ S
Sbjct: 310 DLLSASA 316
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 42/231 (18%)
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCG------------- 287
+V+AL +CA S V G IH + ++G + + + ++++MYAKC
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 288 ------------------RVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
R+ + +++F + E++ ++ +IKG A EA+ LF
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLV----EGKYGFIPNVKHYACMVDL 385
M G+ +EVTL V+SAC+H G + R + + EG+ N+ H C+
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC-- 221
Query: 386 LARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE 436
L++A ++ MP + W +L G +E +E + ++ E
Sbjct: 222 ----LCLKDARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQITE 267
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 206/393 (52%), Gaps = 19/393 (4%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P FN+L + ++ + + ++ +M + + P+ T + ++ + +
Sbjct: 462 LPIKDAVAFNALAQGYTQIGDANKAF---DVYKNMKLHGVCPDSRTMVGMLQTCAFCSDY 518
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT-HRDVVSWTVMIM 211
A+ V+ ++K G + +V ++L+ ++ L + LFD+ + VSW +M+
Sbjct: 519 ARGSCVYGQIIKHGFDSECHVAHALINMFTKCDAL-AAAIVLFDKCGFEKSTVSWNIMMN 577
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G+ G+ ++A+ F QM+ PN VT VN + A A+ A+ +G +H + + G+
Sbjct: 578 GYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCS 637
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+G +L+DMYAKCG +E + F + K + +WN ++ A A+ LF M+
Sbjct: 638 QTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQ 697
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
++ ++ D V+ L+VLSAC H+GLV+ G++IF + E ++ V+HYACMVDLL ++G
Sbjct: 698 ENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGE-RHKIEAEVEHYACMVDLLGKAGL 756
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNL 451
EA E+MR M + +WG+LL SS+ +L S +LV+LEP N ++Y L
Sbjct: 757 FGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYSQDRRL 816
Query: 452 YAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
G ++V +++ K CS +EV
Sbjct: 817 ----GEVNNVSRIK---------KVPACSWIEV 836
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 143/301 (47%), Gaps = 6/301 (1%)
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
++H + ++ G + D+ V SL+ +Y+ L + QLF + RDVVSW+ MI + A
Sbjct: 321 AIHDYAVQQGLIGDVSVATSLMSMYSKCGEL-EIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
G+ D+A+ F M + PN VT+ + L CA A +G IH + + E ++
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
TA+I MYAKCGR ++ F + K+ +NA+ +G +A ++ M+ GV
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
D T++ +L C G ++G ++ K+GF ++++ + +L A
Sbjct: 500 PDSRTMVGMLQTCAFCSDYARGSCVYGQII--KHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLE--FSEFVARKLVELEPANSAYYVHLSNLYAE 454
+ F+ + W ++ G E + F K+ + +P N+ +V++ AE
Sbjct: 558 VLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP-NAVTFVNIVRAAAE 616
Query: 455 M 455
+
Sbjct: 617 L 617
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 153/331 (46%), Gaps = 10/331 (3%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHM-HRNTILPNHYTFPFLFKSLSAPCH 151
V P V ++NS+IR ++ + H +L F +M I P+ Y+F F K+ +
Sbjct: 59 VRDPGVVLWNSMIRGYTRAGLHREAL---GFFGYMSEEKGIDPDKYSFTFALKACAGSMD 115
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
F + +H + ++G D+Y+ +L+ +Y + L S RQ+FD+M +DVV+W M+
Sbjct: 116 FKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVS-ARQVFDKMHVKDVVTWNTMVS 174
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G G ALL F M+ V + V++ N + A + ++ +H + + G+
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF 234
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+ LIDMY C + VF V K+ +W ++ A EE + LF+ M
Sbjct: 235 --AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
VR ++V + L A + G + G I + V+ G I +V ++ + ++ G
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQ--QGLIGDVSVATSLMSMYSKCGE 350
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
L A ++ + D W +++ S + G
Sbjct: 351 LEIAEQLFINIE-DRDVVSWSAMIASYEQAG 380
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 7/253 (2%)
Query: 174 HNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM-QYA 232
HN L+ Y+ R L R +FD + VV W MI G+ AG +AL F M +
Sbjct: 36 HNQLINAYSLFQRQ-DLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEK 94
Query: 233 GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEG 292
G+ P++ + AL ACA S + G IHD I G E DV +GTAL++MY K +
Sbjct: 95 GIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 293 VRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHS 352
+VF + K+V TWN ++ GLA A+ LF+ M V D V+L ++ A +
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKL 214
Query: 353 GLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWG 412
D+ R + G ++ K GFI + ++D+ L A V + ++ WG
Sbjct: 215 EKSDVCRCLHGLVI--KKGFI--FAFSSGLIDMYCNCADLYAAESVFE-EVWRKDESSWG 269
Query: 413 SLLVSSKSQGDLE 425
+++ + G E
Sbjct: 270 TMMAAYAHNGFFE 282
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 147/312 (47%), Gaps = 8/312 (2%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V +N+++ + + S L +F M + +H + L ++S +
Sbjct: 166 VVTWNTMVSGLAQ---NGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRC 222
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
+H V+K G + + L+ +Y L++ +F+E+ +D SW M+ + + G
Sbjct: 223 LHGLVIKKGFI--FAFSSGLIDMYCNCADLYA-AESVFEEVWRKDESSWGTMMAAYAHNG 279
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
F++ L F+ M+ V N+V +AL A A G + G IHD+ + G DV + T
Sbjct: 280 FFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVAT 339
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
+L+ MY+KCG +E ++F ++++++V +W+A+I A +EAI LF M + ++
Sbjct: 340 SLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKP 399
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
+ VTL +VL C +G+ I + + K ++ ++ + A+ G A +
Sbjct: 400 NAVTLTSVLQGCAGVAASRLGKSIHCYAI--KADIESELETATAVISMYAKCGRFSPALK 457
Query: 398 VMRCMPFDPTKA 409
+P A
Sbjct: 458 AFERLPIKDAVA 469
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 172/325 (52%), Gaps = 3/325 (0%)
Query: 141 FLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTH 200
F F SL + C Q + +HA + K+ + DI V +LL +YA S L S R+ F+ M
Sbjct: 246 FTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHL-SDARECFESMVV 304
Query: 201 RDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWI 260
R+VVSW MI+GF G+ +A+ F QM + P+ +T + L++CA A+ +
Sbjct: 305 RNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV 364
Query: 261 HDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSG 320
+ + G + + +LI Y++ G + E + F S++E ++ +W +VI LA
Sbjct: 365 QAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFA 424
Query: 321 EEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA 380
EE++++F M Q ++ D++T L VLSAC+H GLV G + F + E Y +HY
Sbjct: 425 EESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEF-YKIEAEDEHYT 482
Query: 381 CMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPA 440
C++DLL R+G + EA +V+ MP +P+ + E ++ A+KL+E+EP
Sbjct: 483 CLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPT 542
Query: 441 NSAYYVHLSNLYAEMGRWDDVEKVR 465
Y LSN Y G W+ +R
Sbjct: 543 KPVNYSILSNAYVSEGHWNQAALLR 567
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 155/330 (46%), Gaps = 18/330 (5%)
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
H + + H ++K G + +++ N LL Y R F +LFDEM R++V+W ++I
Sbjct: 51 HLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYT-KIREFDDADKLFDEMPLRNIVTWNILI 109
Query: 211 MGF--RNAGKFDDALLAF---EQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIR 265
G R+ A L F ++ + V+ + V+ + + C DS ++ G +H +
Sbjct: 110 HGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMV 169
Query: 266 RNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIR 325
+ G E T+L+ Y KCG + E RVF +V ++++ WNA++ L +EA
Sbjct: 170 KQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 326 LFNRMEQDG--VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMV 383
L M D R D T ++LSAC ++ G+QI L + Y F ++ ++
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQF--DIPVATALL 283
Query: 384 DLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGD-LEFSEFVARKLVE-LEPAN 441
++ A+S L +A E M + W +++V G+ E + L+E L+P
Sbjct: 284 NMYAKSNHLSDARECFESMVVRNVVS-WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE 342
Query: 442 SAYYVHLSNLYAEMGRWDDVEKVRGMMKDR 471
+ LS+ W ++++V+ M+ +
Sbjct: 343 LTFASVLSSCAKFSAIW-EIKQVQAMVTKK 371
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 206/401 (51%), Gaps = 16/401 (3%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
++ +NS+I AF + ++ +F MH + + + T + SL +
Sbjct: 225 NLVTWNSMIAAFQCCNLGKKAI---GVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNE 281
Query: 157 ------SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTH-RDVVSWTVM 209
+H+ +K G + V +L+ VY+ ++ C +LF EM+H RD+V+W +
Sbjct: 282 VSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGI 341
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
I F + A+ F Q++ ++P+ T + L ACA IH + + G+
Sbjct: 342 ITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGF 400
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
D VL +LI YAKCG ++ +RVF + ++V +WN+++K +L + + +F +
Sbjct: 401 LADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQK 460
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
M+ + D T +A+LSAC+H+G V+ G +IF + E K +P + HYAC++D+L+R+
Sbjct: 461 MD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFE-KPETLPQLNHYACVIDMLSRA 516
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVEL-EPANSAYYVHL 448
EA EV++ MP DP +W +LL S + G+ + A KL EL EP NS Y+ +
Sbjct: 517 ERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQM 576
Query: 449 SNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
SN+Y G +++ M+ ++ K+ S E+ + H
Sbjct: 577 SNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVH 617
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 11/221 (4%)
Query: 133 LPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLH--DIYVHNSLLGVYAASPRLFSL 190
L + + LF++ + + ++H H+L + + ++ + N L+ +YA +
Sbjct: 56 LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNIL-Y 114
Query: 191 CRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACAD 250
RQ+FD M R+VVSWT +I G+ AG + F M + PN T+ + L +C
Sbjct: 115 ARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCR- 172
Query: 251 SGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKC---GRVEEGVRVFSSVKEKNVFTW 307
E G +H + G + + A+I MY +C E VF ++K KN+ TW
Sbjct: 173 ---YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTW 229
Query: 308 NAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
N++I G++AI +F RM DGV D TLL + S+
Sbjct: 230 NSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 172/386 (44%), Gaps = 40/386 (10%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P +V + +LI + + N +F+ M + PN +T + S C +
Sbjct: 122 MPERNVVSWTALITGYVQAG---NEQEGFCLFSSMLSHC-FPNEFTLSSVLTS----CRY 173
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVY------AASPRLFSLCRQLFDEMTHRDVVSW 206
+ VH LKLG IYV N+++ +Y AA+ ++ +F+ + +++V+W
Sbjct: 174 EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWT----VFEAIKFKNLVTW 229
Query: 207 TVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAV------EMGAWI 260
MI F+ A+ F +M GV +R T++N ++ S + + +
Sbjct: 230 NSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQL 289
Query: 261 HDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE----KNVFTWNAVIKGLAL 316
H ++G + TALI +Y++ +E+ + E +++ WN +I A+
Sbjct: 290 HSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAV 347
Query: 317 AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDM--GRQIFGFLVEGKYGFIP 374
E AI LF ++ Q+ + D T +VL AC +GLV I +++G GF+
Sbjct: 348 YDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLVTARHALSIHAQVIKG--GFLA 402
Query: 375 NVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKL 434
+ ++ A+ GSL V M + W S+L + G ++ V +K+
Sbjct: 403 DTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS-WNSMLKAYSLHGQVDSILPVFQKM 461
Query: 435 VELEPANSAYYVHLSNLYAEMGRWDD 460
++ P +SA ++ L + + GR ++
Sbjct: 462 -DINP-DSATFIALLSACSHAGRVEE 485
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+V+L LI+MYAKCG + +VF ++ E+NV +W A+I G A + +E LF+ M
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR--- 388
+E TL +VL++C + + G+Q+ G + K G ++ ++ + R
Sbjct: 155 SHCF-PNEFTLSSVLTSCRY----EPGKQVHGLAL--KLGLHCSIYVANAVISMYGRCHD 207
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVS 417
+ EA+ V + F W S++ +
Sbjct: 208 GAAAYEAWTVFEAIKFK-NLVTWNSMIAA 235
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 181/336 (53%), Gaps = 2/336 (0%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
A VH+ +++ G ++ +L+ +Y ++ +++FD+ +++ T ++ +
Sbjct: 256 ALQVHSRMVRFGFNAEVEACGALINMYGKCGKVL-YAQRVFDDTHAQNIFLNTTIMDAYF 314
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
F++AL F +M V PN T L + A+ ++ G +H + ++G+ V+
Sbjct: 315 QDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVM 374
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+G AL++MYAK G +E+ + FS + +++ TWN +I G + G EA+ F+RM G
Sbjct: 375 VGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTG 434
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
+ +T + VL AC+H G V+ G F L++ K+ P+++HY C+V LL+++G ++
Sbjct: 435 EIPNRITFIGVLQACSHIGFVEQGLHYFNQLMK-KFDVQPDIQHYTCIVGLLSKAGMFKD 493
Query: 395 AFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAE 454
A + MR P + W +LL + + + + VA +E P +S YV LSN++A+
Sbjct: 494 AEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAK 553
Query: 455 MGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
W+ V KVR +M +R + K+ G S + + Q H
Sbjct: 554 SREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHV 589
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 3/195 (1%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
L++F+ M + PN YTF L S++ Q +H VLK G+ + + V N+L+ +
Sbjct: 323 LNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNM 382
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
YA S + R+ F MT RD+V+W MI G + G +AL AF++M + G PNR+T
Sbjct: 383 YAKSGSIED-ARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRIT 441
Query: 241 MVNALAACADSGAVEMGA-WIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV 299
+ L AC+ G VE G + + +++ + D+ T ++ + +K G ++ +
Sbjct: 442 FIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTA 501
Query: 300 K-EKNVFTWNAVIKG 313
E +V W ++
Sbjct: 502 PIEWDVVAWRTLLNA 516
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 135/295 (45%), Gaps = 16/295 (5%)
Query: 134 PNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCR- 192
PN + +FKS S + + H LK G + +V N+L+ +Y SLC
Sbjct: 134 PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMY-------SLCSG 186
Query: 193 -----QLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAA 247
++ D++ + D+ ++ + G+ G F + L + N +T +++L
Sbjct: 187 NGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRL 246
Query: 248 CADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTW 307
++ + + +H + R G+ +V ALI+MY KCG+V RVF +N+F
Sbjct: 247 FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN 306
Query: 308 NAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVE 367
++ KS EEA+ LF++M+ V +E T +L++ L+ G + G ++
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVL- 365
Query: 368 GKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
K G+ +V +V++ A+SGS+ +A + M F W +++ G
Sbjct: 366 -KSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI-VTWNTMISGCSHHG 418
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 131/290 (45%), Gaps = 19/290 (6%)
Query: 131 TILPNHYTFPF-------LFKSLSAPCHFAQAQSVHAHVL---KLGHLHDIYVHNSLLGV 180
+++P PF L K + + +S+HAH++ + D Y NSL+ +
Sbjct: 19 SLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINL 78
Query: 181 YAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA-PNRV 239
Y R R+LFD M R+VVSW M+ G++N+G + L F+ M ++G + PN
Sbjct: 79 YVKC-RETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEF 137
Query: 240 TMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV 299
+C++SG +E G H + G + L+ MY+ C E +RV +
Sbjct: 138 VATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDL 197
Query: 300 KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGR 359
++ +++ + G + +E + + + + + +T L+ L ++ +++
Sbjct: 198 PYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLAL 257
Query: 360 QIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA 409
Q+ +V ++GF V+ ++++ + G + A V FD T A
Sbjct: 258 QVHSRMV--RFGFNAEVEACGALINMYGKCGKVLYAQRV-----FDDTHA 300
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 199/389 (51%), Gaps = 16/389 (4%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA---QAQS 157
+NS+I + S HH L L F M R + + L ++SA + Q +
Sbjct: 548 WNSVISGCASSGHH---LESLRAFQAMSREGKI--RHDLITLLGTISASGNLGLVLQGRC 602
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
H +K D + N+L+ +Y + S + +F ++ ++ SW +I
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVK-VFGLISDPNLCSWNCVISALSQNK 661
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
+ F ++ + PN +T V L+A G+ G H + R G++ + +
Sbjct: 662 AGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSA 718
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG-VR 336
AL+DMY+ CG +E G++VF + ++ WN+VI GE+A+ LF + + +
Sbjct: 719 ALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEME 778
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
++ + +++LSAC+HSG +D G + + E K+G P +H +VD+L R+G LREA+
Sbjct: 779 PNKSSFISLLSACSHSGFIDEGLSYYKQMEE-KFGVKPVTEHRVWIVDMLGRAGKLREAY 837
Query: 397 EVMRCMPFDPTKA-MWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEM 455
E + + +P KA +WG+LL + GD + + VA L E+EP N++YY+ L+N Y +
Sbjct: 838 EFITGIG-EPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGL 896
Query: 456 GRWDDVEKVRGMMKDRQLTKDLGCSSVEV 484
G W++ ++R M++D L K G S ++V
Sbjct: 897 GGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 29/299 (9%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+SVH + KLG L ++ RL ++ RD+ SW +I G
Sbjct: 516 GKSVHCWLQKLGDLTSAFL------------RLETMSET-------RDLTSWNSVISGCA 556
Query: 215 NAGKFDDALLAFEQMQYAG-VAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
++G ++L AF+ M G + + +T++ ++A + G V G H ++ ELD
Sbjct: 557 SSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDT 616
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
L LI MY +C +E V+VF + + N+ +WN VI L+ K+G E +LF ++
Sbjct: 617 QLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK-- 674
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
+ +E+T + +LSA G G Q L+ + GF N A +VD+ + G L
Sbjct: 675 -LEPNEITFVGLLSASTQLGSTSYGMQAHCHLI--RRGFQANPFVSAALVDMYSSCGMLE 731
Query: 394 EAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKL---VELEPANSAYYVHLS 449
+V R + A W S++ + G E + + ++L E+EP S++ LS
Sbjct: 732 TGMKVFRNSGVNSISA-WNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLS 789
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 4/212 (1%)
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
+H ++ G + D + N+L+ +YA L S +F M HRD+VSW ++ G
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSS-AECVFTHMEHRDIVSWNTIMTKCLANG 268
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW--ELDVVL 275
+L F+ M +G + VT ++AC+ + +G +H + ++G+ E V +
Sbjct: 269 HPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSV 328
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ-DG 334
G ++I MY+KCG E VF + ++V + NA++ G A EEA + N+M+ D
Sbjct: 329 GNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDK 388
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLV 366
++ D T++++ S C GR + G+ V
Sbjct: 389 IQPDIATVVSITSICGDLSFSREGRAVHGYTV 420
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 4/258 (1%)
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
+SVH LK G L D+ + LL Y + L S LFDE+ +DV+ W MI
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVS-SSCLFDELKEKDVIVWNSMITALNQ 165
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
G++ A+ F +M + G + T++ A +A + + +H G D L
Sbjct: 166 NGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
AL+++YAK + VF+ ++ +++ +WN ++ ++++ F M G
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
AD VT V+SAC+ + +G + G +++ Y +V ++ + ++ G A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 396 ---FEVMRCMPFDPTKAM 410
FE + C + A+
Sbjct: 346 ETVFEELVCRDVISSNAI 363
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 118/253 (46%), Gaps = 11/253 (4%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHD--IYVHNSLL 178
L F M + + TF + + S+ +S+H V+K G+ + + V NS++
Sbjct: 274 LQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSII 333
Query: 179 GVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAG-VAPN 237
+Y+ +F+E+ RDV+S ++ GF G F++A QMQ + P+
Sbjct: 334 SMYSKCGDT-EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRR---NGWELDVVLGTALIDMYAKCGRVEEGVR 294
T+V+ + C D G +H + R L+V+ ++IDMY KCG +
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVI--NSVIDMYGKCGLTTQAEL 450
Query: 295 VFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM--EQDGVRADEVTLLAVLSACNHS 352
+F + +++ +WN++I + +A LF + E + T+LA+L++C+ S
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Query: 353 GLVDMGRQIFGFL 365
+ G+ + +L
Sbjct: 511 DSLIFGKSVHCWL 523
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 198/434 (45%), Gaps = 41/434 (9%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSL-TPLSIFAHMHRNTILPNHYTFPFLFKSLSA-PC 150
+P+ F +N +I H H L + LS+F M + P+ YTF L + SA
Sbjct: 164 MPKRVAFAWNIMISG----HAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSS 219
Query: 151 HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQL---------------- 194
+ + VHA +LK G + NS+L Y R+L
Sbjct: 220 NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIID 279
Query: 195 --------------FDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
F +++V+WT MI G+ G + AL F +M +GV +
Sbjct: 280 ACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFA 339
Query: 241 MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
L AC+ + G IH + G++ +G AL+++YAKCG ++E R F +
Sbjct: 340 YGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA 399
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
K++ +WN ++ + ++A++L++ M G++ D VT + +L+ C+HSGLV+ G
Sbjct: 400 NKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCM 459
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRC----MPFDPTKAMWGSLLV 416
IF +V+ Y V H CM+D+ R G L EA ++ + + W +LL
Sbjct: 460 IFESMVK-DYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLG 518
Query: 417 SSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKD 476
+ + E V++ L EP+ +V LSNLY GRW + E VR M +R + K
Sbjct: 519 ACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKT 578
Query: 477 LGCSSVEVEEQGHT 490
GCS +EV Q T
Sbjct: 579 PGCSWIEVGNQVST 592
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 155/370 (41%), Gaps = 75/370 (20%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P +N+++ ++S H ++ ++F + + P+ Y+F + + ++ +
Sbjct: 30 MPELDTVAWNTMLTSYSRLGLHQEAI---ALFTQLRFSDAKPDDYSFTAILSTCASLGNV 86
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYA------ASPRLF-----------SLCRQLF 195
+ + + V++ G + V+NSL+ +Y ++ ++F + C LF
Sbjct: 87 KFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLF 146
Query: 196 D---------------EMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT 240
EM R +W +MI G + GK + L F++M + P+ T
Sbjct: 147 AYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYT 206
Query: 241 MVNALAAC-ADSGAVEMGAWIHDFIRRNGWE----------------------------- 270
+ + AC ADS V G +H + +NGW
Sbjct: 207 FSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESI 266
Query: 271 --LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN 328
L V ++ID K G E+ + VF EKN+ TW +I G GE+A+R F
Sbjct: 267 EVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFV 326
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVE---GKYGFIPNVKHYACMVDL 385
M + GV +D AVL AC+ L+ G+ I G L+ Y ++ N +V+L
Sbjct: 327 EMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNA-----LVNL 381
Query: 386 LARSGSLREA 395
A+ G ++EA
Sbjct: 382 YAKCGDIKEA 391
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 38/284 (13%)
Query: 176 SLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA 235
S + A S R+ S RQ+FD M D V+W M+ + G +A+ F Q++++
Sbjct: 9 SKIASLAKSGRIAS-ARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 236 PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCG-------- 287
P+ + L+ CA G V+ G I + R+G+ + + +LIDMY KC
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 288 -------------------------RVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEE 322
+ E + VF + ++ F WN +I G A E
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 323 AIRLFNRMEQDGVRADEVTLLAVLSACN-HSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC 381
+ LF M + + D T ++++AC+ S V GR + ++ K G+ V+
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVML--KNGWSSAVEAKNS 245
Query: 382 MVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
++ + GS +A + + T+ W S++ + G+ E
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGETE 288
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
T+ I AK GR+ +VF + E + WN ++ + +EAI LF ++ +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
D+ + A+LS C G V GR+I ++ + GF ++ ++D+ + A
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVI--RSGFCASLPVNNSLIDMYGKCSDTLSAN 125
Query: 397 EVMRCMPFDP-TKAMWGSLL 415
+V R M D + W SLL
Sbjct: 126 KVFRDMCCDSRNEVTWCSLL 145
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 203/427 (47%), Gaps = 45/427 (10%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHR-NTILPNHYTFPFLFKSLSAPCH 151
VP V +N+ I + + L P S+F M + ++ PN TF + ++ +
Sbjct: 190 VPHKSVVTYNAFISGLMENGVMN--LVP-SVFNLMRKFSSEEPNDVTFVNAITACASLLN 246
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTH-RDVVSWTVMI 210
+ +H V+K + V +L+ +Y+ R + +F E+ R+++SW +I
Sbjct: 247 LQYGRQLHGLVMKKEFQFETMVGTALIDMYSKC-RCWKSAYIVFTELKDTRNLISWNSVI 305
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVT------------------------------ 240
G G+ + A+ FE++ G+ P+ T
Sbjct: 306 SGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV 365
Query: 241 -----MVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRV 295
+ + L+AC+D ++ G IH + + E D+ + T+LIDMY KCG R+
Sbjct: 366 PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRI 425
Query: 296 FSSV--KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSG 353
F K K+ WN +I G E AI +F + ++ V T AVLSAC+H G
Sbjct: 426 FDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCG 485
Query: 354 LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGS 413
V+ G QIF + E +YG+ P+ +H CM+DLL RSG LREA EV+ M + S
Sbjct: 486 NVEKGSQIFRLMQE-EYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SS 543
Query: 414 LLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQL 473
LL S + D E A KL ELEP N A +V LS++YA + RW+DVE +R ++ +QL
Sbjct: 544 LLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQL 603
Query: 474 TKDLGCS 480
K G S
Sbjct: 604 VKLPGLS 610
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 156/327 (47%), Gaps = 10/327 (3%)
Query: 134 PNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQ 193
PN +TFP L KS + Q + +HA V+K G D++ +L+ +Y ++ +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 194 LFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGA 253
L DEM R + S + G G DA F + +G N VT+ + L C D
Sbjct: 89 L-DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD--- 144
Query: 254 VEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKG 313
+E G +H ++G+E++V +GT+L+ MY++CG R+F V K+V T+NA I G
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 314 LALAKSGEEAIRLFNRMEQ-DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGF 372
L +FN M + ++VT + ++AC + GRQ+ G +++ ++ F
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 373 IPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVAR 432
V ++D+ ++ + A+ V + W S++ G E + +
Sbjct: 265 ETMVG--TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 433 KLVE--LEPANSAYYVHLSNLYAEMGR 457
KL L+P +SA + L + ++++G+
Sbjct: 323 KLDSEGLKP-DSATWNSLISGFSQLGK 348
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 235 APNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVR 294
+PN+ T L +CA G V G +H + + G+ +DV TAL+ MY K +V + ++
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 295 VFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGL 354
V + E+ + + NA + GL +A R+F G + VT+ +VL C G
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GD 144
Query: 355 VDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
++ G Q+ + K GF V +V + +R G
Sbjct: 145 IEGGMQLHCLAM--KSGFEMEVYVGTSLVSMYSRCG 178
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 172/316 (54%), Gaps = 4/316 (1%)
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
D + N ++ YA+ + L R F++ + VSW +I + + +A+ F +
Sbjct: 341 RDAHSWNMMVSGYASVGNV-ELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIR 399
Query: 229 MQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGR 288
M G P+ T+ + L+A + +G +H + + DV + ALI MY++CG
Sbjct: 400 MNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGE 458
Query: 289 VEEGVRVFSSVK-EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLS 347
+ E R+F +K ++ V TWNA+I G A + EA+ LF M+ +G+ +T ++VL+
Sbjct: 459 IMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLN 518
Query: 348 ACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPT 407
AC H+GLVD + F ++ Y P ++HY+ +V++ + G EA ++ MPF+P
Sbjct: 519 ACAHAGLVDEAKAQFVSMM-SVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPD 577
Query: 408 KAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGM 467
K +WG+LL + + ++ + A + LEP +S YV L N+YA+MG WD+ +VR
Sbjct: 578 KTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMN 637
Query: 468 MKDRQLTKDLGCSSVE 483
M+ +++ K+ G S V+
Sbjct: 638 MESKRIKKERGSSWVD 653
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 81/206 (39%), Gaps = 45/206 (21%)
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
D + N+++ YA + R+ LF++M R+ VSW+ MI GF G+ D A++ F +
Sbjct: 134 RDSFSWNTMISGYAKNRRIGEAL-LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 229 M-----------------------------QYAGVAPNRVTMVNA----LAACADSGAVE 255
M QY + R +V A + G VE
Sbjct: 193 MPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVE 252
Query: 256 MGAWIHDFIR-----------RNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNV 304
+ D I R + +VV ++I Y K G V +F +K+++
Sbjct: 253 AARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDT 312
Query: 305 FTWNAVIKGLALAKSGEEAIRLFNRM 330
+WN +I G E+A LF+ M
Sbjct: 313 ISWNTMIDGYVHVSRMEDAFALFSEM 338
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 181/335 (54%), Gaps = 14/335 (4%)
Query: 164 KLGHLHDIYVHNSLLGVYAAS---PRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD 220
++ LHD S++ Y + R F L ++L D +D V+WTVMI G F
Sbjct: 393 RVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD----KDGVTWTVMISGLVQNELFA 448
Query: 221 DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG--WELDVVLGTA 278
+A M G+ P T L++ + ++ G IH I + ++ D++L +
Sbjct: 449 EAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNS 508
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRAD 338
L+ MYAKCG +E+ +F+ + +K+ +WN++I GL+ ++A+ LF M G + +
Sbjct: 509 LVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPN 568
Query: 339 EVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
VT L VLSAC+HSGL+ G ++F + E Y P + HY M+DLL R+G L+EA E
Sbjct: 569 SVTFLGVLSACSHSGLITRGLELFKAMKE-TYSIQPGIDHYISMIDLLGRAGKLKEAEEF 627
Query: 399 MRCMPFDPTKAMWGSLL----VSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAE 454
+ +PF P ++G+LL ++ + + +E A +L+EL+P N+ +V L N+YA
Sbjct: 628 ISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAG 687
Query: 455 MGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGH 489
+GR D +++R M + + K GCS V V + +
Sbjct: 688 LGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRAN 722
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 41/292 (14%)
Query: 193 QLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR-VTMVNAL--AACA 249
+LFDEM R+VVSW ++ G G + A F+ M P+R V NA+
Sbjct: 159 ELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM------PSRDVVSWNAMIKGYIE 212
Query: 250 DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNA 309
+ G E D +N VV T+++ Y + G V E R+F + E+N+ +W A
Sbjct: 213 NDGMEEAKLLFGDMSEKN-----VVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTA 267
Query: 310 VIKGLALAKSGEEAIRLFNRMEQ--DGVRADEVTLLAVLSACNHSGLV--DMGRQIFGFL 365
+I G A + EA+ LF M++ D V + TL+++ AC G+ +G Q+ +
Sbjct: 268 MISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQV 327
Query: 366 VEGKYGFIPNVKHYA-CMVDLLARSG-------SLREAFEVMRCMPFDPTKAMWGSLLVS 417
+ + + + A +V + A SG L E+F++ C ++
Sbjct: 328 ISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSC----------NIIINR 377
Query: 418 SKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMK 469
GDLE +E + ++ L + + + + Y E G DV + G+ +
Sbjct: 378 YLKNGDLERAETLFERVKSLH--DKVSWTSMIDGYLEAG---DVSRAFGLFQ 424
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 37/223 (16%)
Query: 192 RQLFDEMTHRD----VVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR-VTMVNALA 246
R L D++ R VV WT ++ + G D+A + FE M P R + NA+
Sbjct: 62 RHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVM------PERNIVTCNAM- 114
Query: 247 ACADSGAVEMGAWIHDFIRRNGWEL------DVVLGTALIDMYAKCGRVEEGVRVFSSVK 300
+ ++ W L +VV T ++ GR E+ V +F +
Sbjct: 115 ---------LTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMP 165
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
E+NV +WN ++ GL E+A ++F+ M D V+ A++ + ++ +
Sbjct: 166 ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS----RDVVSWNAMIKGYIENDGMEEAKL 221
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMP 403
+FG + E NV + MV R G +REA+ + MP
Sbjct: 222 LFGDMSE------KNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 200/389 (51%), Gaps = 7/389 (1%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V +N LI + S S N L F M I P+ YT + S ++ +
Sbjct: 200 VVSWNCLILSCSDSG---NKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
A +K+G L + V + + +++ RL + LF E+ D V MI +
Sbjct: 257 ALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVK-LFRELEKWDSVLCNSMIGSYSWHC 315
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
+DAL F V P++ T + L++ ++ ++ GA +H + + G++LD + T
Sbjct: 316 CGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVAT 374
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD-GVR 336
+L++MY K G V+ + VF+ K++ WN VI GLA E++ +FN++ + ++
Sbjct: 375 SLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLK 434
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
D VTL+ +L AC ++G V+ G QIF + E +G P +HYAC+++LL R G + EA
Sbjct: 435 PDRVTLMGILVACCYAGFVNEGIQIFSSM-EKAHGVNPGNEHYACIIELLCRVGMINEAK 493
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMG 456
++ +PF+P+ +W +L +S GD +E VA+ ++E EP +S Y+ L +Y
Sbjct: 494 DIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTW 553
Query: 457 RWDDVEKVRGMMKDRQLTKDLGCSSVEVE 485
RW++ K+R M + +L G S + +E
Sbjct: 554 RWENSVKLRYAMNEHKLKSAQGSSKISIE 582
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 147/307 (47%), Gaps = 11/307 (3%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V +N++I H + +F M R I P +TF L ++ H
Sbjct: 96 MPERDVVSWNTMISGLVSCGFHEYGI---RVFFDMQRWEIRPTEFTFSILASLVTCVRH- 151
Query: 153 AQAQSVHAHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
+ +H + + G +++ V NS++ +Y +F +F M RDVVSW +I+
Sbjct: 152 --GEQIHGNAICSGVSRYNLVVWNSVMDMYR-RLGVFDYALSVFLTMEDRDVVSWNCLIL 208
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
++G + AL F M+ + P+ T+ ++ C+D + G + G+
Sbjct: 209 SCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLS 268
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+ ++ A IDM++KC R+++ V++F +++ + N++I + GE+A+RLF
Sbjct: 269 NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAM 328
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
VR D+ T +VLS+ N + ++D G + ++ K GF + ++++ ++GS
Sbjct: 329 TQSVRPDKFTFSSVLSSMN-AVMLDHGADVHSLVI--KLGFDLDTAVATSLMEMYFKTGS 385
Query: 392 LREAFEV 398
+ A V
Sbjct: 386 VDLAMGV 392
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 44/296 (14%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL-----------------FSLCRQ---- 193
A+ VHA +L+ G + Y N L +Y S + +++C +
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 194 ---------LFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVT--MV 242
LFDEM RDVVSW MI G + G + + F MQ + P T ++
Sbjct: 83 NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL 142
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK 302
+L C G G I + R ++V+ +++DMY + G + + VF +++++
Sbjct: 143 ASLVTCVRHGEQIHGNAICSGVSR----YNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 303 NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
+V +WN +I + + + E A+ F M + ++ DE T+ V+S C+ + G+Q
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSS 418
+ K GF+ N +D+ ++ L ++ ++ R + W S+L +S
Sbjct: 259 ALCI--KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE------KWDSVLCNS 306
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 164/319 (51%), Gaps = 7/319 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P ++ +N+++ + H+H +L L++ N ++ T ++ S
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI---DNVTLVWILNVCSGISDV 411
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTH-RDVVSWTVMIM 211
+ H + + G+ ++ V N+LL +Y L S F +M+ RD VSW ++
Sbjct: 412 QMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQS-ANIWFRQMSELRDEVSWNALLT 470
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G G+ + AL FE MQ P++ T+ LA CA+ A+ +G IH F+ R+G+++
Sbjct: 471 GVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKI 529
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
DVV+ A++DMY+KC + + VF +++ WN++I+G +E LF +E
Sbjct: 530 DVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLE 589
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+GV+ D VT L +L AC G V++G Q F + KY P V+HY CM++L + G
Sbjct: 590 NEGVKPDHVTFLGILQACIREGHVELGFQYFSSM-STKYHISPQVEHYDCMIELYCKYGC 648
Query: 392 LREAFEVMRCMPFDPTKAM 410
L + E + MPFDP M
Sbjct: 649 LHQLEEFLLLMPFDPPMQM 667
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 160/351 (45%), Gaps = 35/351 (9%)
Query: 123 IFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYA 182
+F M+R+ + +F + KS + +H V+K G+ ++ + S++ VY
Sbjct: 149 MFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYG 208
Query: 183 ASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
R+ S R++FDE+ + VSW V++ + G D+A++ F +M V P T+
Sbjct: 209 KC-RVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVS 267
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK-- 300
+ + AC+ S A+E+G IH + D V+ T++ DMY KC R+E RVF +
Sbjct: 268 SVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSK 327
Query: 301 -----------------------------EKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
E+N+ +WNA++ G A +EA+ M
Sbjct: 328 DLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMR 387
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
Q+ D VTL+ +L+ C+ V MG+Q GF+ ++G+ NV ++D+ + G+
Sbjct: 388 QEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIY--RHGYDTNVIVANALLDMYGKCGT 445
Query: 392 LREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFS-EFVARKLVELEPAN 441
L+ A R M + W +LL G E + F VE +P+
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSK 496
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 146/336 (43%), Gaps = 9/336 (2%)
Query: 135 NHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQL 194
+++ + LF+S S+ QA+ V +H++ L I++ N + Y R+L
Sbjct: 60 SYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCG-CVDDAREL 118
Query: 195 FDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAV 254
F+EM RD SW +I G D+ F +M GV + L +C +
Sbjct: 119 FEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDL 178
Query: 255 EMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGL 314
+ +H + + G+ +V L T+++D+Y KC + + RVF + + +WN +++
Sbjct: 179 RLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRY 238
Query: 315 ALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIP 374
+EA+ +F +M + VR T+ +V+ AC+ S +++G+ I V K +
Sbjct: 239 LEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAV--KLSVVA 296
Query: 375 NVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKL 434
+ + D+ + L A V FD T++ S+ S + AR+L
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRV-----FDQTRSKDLKSWTSAMSGYAMSGLTREAREL 351
Query: 435 VELEPA-NSAYYVHLSNLYAEMGRWDDVEKVRGMMK 469
+L P N + + Y WD+ +M+
Sbjct: 352 FDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMR 387
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 185/325 (56%), Gaps = 7/325 (2%)
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
D N+++ + + + C LFD M ++V+SWT MI G+ + ++AL F +
Sbjct: 262 RDFASWNTMITGFIRNREMNKAC-GLFDRMPEKNVISWTTMITGYVENKENEEALNVFSK 320
Query: 229 MQYAG-VAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCG 287
M G V PN T V+ L+AC+D + G IH I ++ + + ++ +AL++MY+K G
Sbjct: 321 MLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG 380
Query: 288 RVEEGVRVFSS--VKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAV 345
+ ++F + V ++++ +WN++I A G+EAI ++N+M + G + VT L +
Sbjct: 381 ELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNL 440
Query: 346 LSACNHSGLVDMGRQIFGFLVEGKYGFIP-NVKHYACMVDLLARSGSLREAFEVMRCMPF 404
L AC+H+GLV+ G + F LV + +P +HY C+VDL R+G L++ + C
Sbjct: 441 LFACSHAGLVEKGMEFFKDLVRDES--LPLREEHYTCLVDLCGRAGRLKDVTNFINCDDA 498
Query: 405 DPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKV 464
+++ +G++L + ++ ++ V +K++E ++ YV +SN+YA G+ ++ ++
Sbjct: 499 RLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEM 558
Query: 465 RGMMKDRQLTKDLGCSSVEVEEQGH 489
R MK++ L K GCS V+V +Q H
Sbjct: 559 RMKMKEKGLKKQPGCSWVKVGKQNH 583
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 191 CRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACAD 250
R+LFD + RDVV+WT +I G+ G +A F+++ MV+
Sbjct: 65 ARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQ 124
Query: 251 SGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAV 310
EM + RN VV +ID YA+ GR+++ + +F + E+N+ +WN++
Sbjct: 125 LSIAEM--LFQEMPERN-----VVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSM 177
Query: 311 IKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKY 370
+K L +EA+ LF RM R D V+ A++ +G VD R++F + E
Sbjct: 178 VKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPE--- 230
Query: 371 GFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLV 416
N+ + M+ A++ + EA ++ + MP + A W +++
Sbjct: 231 ---RNIISWNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMIT 272
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 142/336 (42%), Gaps = 45/336 (13%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRN-TILPNHYTFPFLFKSLSAPCH 151
+P +V + ++I + + + +L ++F+ M R+ ++ PN T+ + + S
Sbjct: 290 MPEKNVISWTTMITGYVENKENEEAL---NVFSKMLRDGSVKPNVGTYVSILSACSDLAG 346
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDE--MTHRDVVSWTVM 209
+ Q +H + K H + V ++LL +Y+ S L + R++FD + RD++SW M
Sbjct: 347 LVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIA-ARKMFDNGLVCQRDLISWNSM 405
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMG-AWIHDFIRRNG 268
I + + G +A+ + QM+ G P+ VT +N L AC+ +G VE G + D +R
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN 328
L T L+D+ + GR+++ + N
Sbjct: 466 LPLREEHYTCLVDLCGRAGRLKD----------------------------------VTN 491
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
+ D R A+LSACN V + +++ ++E + Y M ++ A
Sbjct: 492 FINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGS---DDAGTYVLMSNIYAA 548
Query: 389 SGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDL 424
+G EA E+ M K G V Q L
Sbjct: 549 NGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHL 584
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 153/356 (42%), Gaps = 79/356 (22%)
Query: 175 NSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGV 234
N+++ YA S R+ +LFDEM R++VSW M+ G+ D+A+ FE+M V
Sbjct: 144 NTMIDGYAQSGRI-DKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV 202
Query: 235 APNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVR 294
+ MV+ LA +G V+ + D + E +++ A+I YA+ R++E +
Sbjct: 203 V-SWTAMVDGLAK---NGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEADQ 254
Query: 295 VF-------------------------------SSVKEKNVFTWNAVIKGLALAKSGEEA 323
+F + EKNV +W +I G K EEA
Sbjct: 255 LFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEA 314
Query: 324 IRLFNRMEQDG-VRADEVTLLAVLSACNH-SGLVDMGRQIF------------------- 362
+ +F++M +DG V+ + T +++LSAC+ +GLV+ G+QI
Sbjct: 315 LNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE-GQQIHQLISKSVHQKNEIVTSALL 373
Query: 363 ------GFLVEGKYGFIP------NVKHYACMVDLLARSGSLREAFEV---MRCMPFDPT 407
G L+ + F ++ + M+ + A G +EA E+ MR F P+
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 408 KAMWGSLLVSSKSQGDLEFSEFVARKLVELE--PANSAYYVHLSNLYAEMGRWDDV 461
+ +LL + G +E + LV E P +Y L +L GR DV
Sbjct: 434 AVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDV 489
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 169 HDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQ 228
++ +++ Y S +L S+ LF EM R+VVSW MI G+ +G+ D AL F++
Sbjct: 107 KNVVTWTAMVSGYLRSKQL-SIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDE 165
Query: 229 MQYAGVAPNR--VTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKC 286
M P R V+ + + A G ++ + + + R DVV TA++D AK
Sbjct: 166 M------PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKN 215
Query: 287 GRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
G+V+E R+F + E+N+ +WNA+I G A +EA +LF M +
Sbjct: 216 GKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPE 261
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRAD 338
LI K G++ E ++F + E++V TW VI G EA LF+R++ R +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS---RKN 108
Query: 339 EVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
VT A++S S + + +F + E NV + M+D A+SG + +A E+
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPE------RNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 399 MRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAY-YVHLSNLYAEMGR 457
MP + W S++ + +G ++ A L E P + + + A+ G+
Sbjct: 163 FDEMP-ERNIVSWNSMVKALVQRGRID----EAMNLFERMPRRDVVSWTAMVDGLAKNGK 217
Query: 458 WDDVEKVRGMMKDRQL 473
D+ ++ M +R +
Sbjct: 218 VDEARRLFDCMPERNI 233
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 173/316 (54%), Gaps = 17/316 (5%)
Query: 169 HDI-YVHNSLLGVYAASPRLFSLCRQL------FDEMTHRDVVSWTVMIMGFRNAGKFDD 221
HDI V NSL+ +Y S C L F ++ + +W +I GF + ++
Sbjct: 354 HDIDNVRNSLITMY-------SRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 222 ALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFI-RRNGWELDVVLGTALI 280
++M +G PN +T+ + L A G ++ G H +I RR ++ ++L +L+
Sbjct: 407 TSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 281 DMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEV 340
DMYAK G + RVF S+++++ T+ ++I G GE A+ F M++ G++ D V
Sbjct: 467 DMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHV 526
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
T++AVLSAC+HS LV G +F + E +G ++HY+CMVDL R+G L +A ++
Sbjct: 527 TMVAVLSACSHSNLVREGHWLFTKM-EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 401 CMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARK-LVELEPANSAYYVHLSNLYAEMGRWD 459
+P++P+ AM +LL + G+ E+ A K L+E +P + +Y+ L+++YA G W
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 460 DVEKVRGMMKDRQLTK 475
+ V+ ++ D + K
Sbjct: 646 KLVTVKTLLSDLGVQK 661
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 155/345 (44%), Gaps = 47/345 (13%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
H +N LI ++ + S+ S++ M I + +T+P + K+ +A FA +
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESV---SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
VH + H ++YV N+L+ +Y ++ + R+LFD M+ RD VSW +I + +
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKV-DVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 217 GKFDDALLAFEQMQYAGVAPNRVT-----------------------------------M 241
K +A ++M +GV + VT M
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 242 VNALAACADSGAVEMGAWIHDFIRRN---GWELDVVLGTALIDMYAKCGRVEEGVRVFSS 298
+N L AC+ GA++ G H + R+ ++D V + LI MY++C + VF
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS-LITMYSRCSDLRHAFIVFQQ 382
Query: 299 VKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
V+ ++ TWN++I G A + EE L M G + +TL ++L G + G
Sbjct: 383 VEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG 442
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL---REAFEVMR 400
++ +++ + + + + +VD+ A+SG + + F+ MR
Sbjct: 443 KEFHCYILR-RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 7/205 (3%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVV---SWTV 208
F Q +HAH + G D + L+ Y+A F+L + + +++ W V
Sbjct: 99 FVPGQQLHAHCISSGLEFDSVLVPKLVTFYSA----FNLLDEAQTITENSEILHPLPWNV 154
Query: 209 MIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG 268
+I + +F +++ +++M G+ + T + + ACA G +H I +
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN 328
++ + ALI MY + G+V+ R+F + E++ +WNA+I + EA +L +
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 329 RMEQDGVRADEVTLLAVLSACNHSG 353
RM GV A VT + C +G
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 173/316 (54%), Gaps = 17/316 (5%)
Query: 169 HDI-YVHNSLLGVYAASPRLFSLCRQL------FDEMTHRDVVSWTVMIMGFRNAGKFDD 221
HDI V NSL+ +Y S C L F ++ + +W +I GF + ++
Sbjct: 354 HDIDNVRNSLITMY-------SRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 222 ALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFI-RRNGWELDVVLGTALI 280
++M +G PN +T+ + L A G ++ G H +I RR ++ ++L +L+
Sbjct: 407 TSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 281 DMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEV 340
DMYAK G + RVF S+++++ T+ ++I G GE A+ F M++ G++ D V
Sbjct: 467 DMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHV 526
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
T++AVLSAC+HS LV G +F + E +G ++HY+CMVDL R+G L +A ++
Sbjct: 527 TMVAVLSACSHSNLVREGHWLFTKM-EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 401 CMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARK-LVELEPANSAYYVHLSNLYAEMGRWD 459
+P++P+ AM +LL + G+ E+ A K L+E +P + +Y+ L+++YA G W
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 460 DVEKVRGMMKDRQLTK 475
+ V+ ++ D + K
Sbjct: 646 KLVTVKTLLSDLGVQK 661
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 155/345 (44%), Gaps = 47/345 (13%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
H +N LI ++ + S+ S++ M I + +T+P + K+ +A FA +
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESV---SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNA 216
VH + H ++YV N+L+ +Y ++ + R+LFD M+ RD VSW +I + +
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKV-DVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 217 GKFDDALLAFEQMQYAGVAPNRVT-----------------------------------M 241
K +A ++M +GV + VT M
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 242 VNALAACADSGAVEMGAWIHDFIRRN---GWELDVVLGTALIDMYAKCGRVEEGVRVFSS 298
+N L AC+ GA++ G H + R+ ++D V + LI MY++C + VF
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS-LITMYSRCSDLRHAFIVFQQ 382
Query: 299 VKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
V+ ++ TWN++I G A + EE L M G + +TL ++L G + G
Sbjct: 383 VEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG 442
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL---REAFEVMR 400
++ +++ + + + + +VD+ A+SG + + F+ MR
Sbjct: 443 KEFHCYILR-RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 7/205 (3%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVV---SWTV 208
F Q +HAH + G D + L+ Y+A F+L + + +++ W V
Sbjct: 99 FVPGQQLHAHCISSGLEFDSVLVPKLVTFYSA----FNLLDEAQTITENSEILHPLPWNV 154
Query: 209 MIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG 268
+I + +F +++ +++M G+ + T + + ACA G +H I +
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN 328
++ + ALI MY + G+V+ R+F + E++ +WNA+I + EA +L +
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 329 RMEQDGVRADEVTLLAVLSACNHSG 353
RM GV A VT + C +G
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 191/396 (48%), Gaps = 8/396 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
VP V +NS++ S + + L L +F+ M P+ F S
Sbjct: 275 VPEKDVISWNSIV---SVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDI 331
Query: 153 AQAQSVHAHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
+ +H +VLK+G + ++V ++L+ +Y + + L+ + ++ ++
Sbjct: 332 QSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIEN-SALLYQSLPCLNLECCNSLMT 390
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADS--GAVEMGAWIHDFIRRNGW 269
+ G D + F M G + VT+ L A + S ++ +H ++G+
Sbjct: 391 SLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGY 450
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
DV + +LID Y K G+ E +VF + N+F ++I G A G + +++
Sbjct: 451 AADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLRE 510
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
M++ + DEVT+L+VLS C+HSGLV+ G IF L E KYG P K YACMVDLL R+
Sbjct: 511 MDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSL-ESKYGISPGRKLYACMVDLLGRA 569
Query: 390 GSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVHLS 449
G + +A ++ D W SLL S + + A L+ LEP N A Y+ +S
Sbjct: 570 GLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVS 629
Query: 450 NLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVE 485
Y E+G ++ ++R + R+L +++G SSV V+
Sbjct: 630 KFYFEIGDFEISRQIREIAASRELMREIGYSSVVVK 665
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 162/323 (50%), Gaps = 11/323 (3%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V +N LI S + + SL + ++A M + + TFP + S +
Sbjct: 77 VVTYNLLI---SGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQ 133
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VH V+ LG +++V ++L+G+YA RL + +LFDEM R++ +++ F G
Sbjct: 134 VHCRVISLGFGCNMFVRSALVGLYAC-LRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL-DVVLG 276
+ + +M+ GVA N +T + C+ V G +H + ++GW + ++ +
Sbjct: 193 ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVA 252
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
L+D Y+ CG + +R F++V EK+V +WN+++ A S +++ LF++M+ G R
Sbjct: 253 NVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKR 312
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGF-IPNVKHYACMVDLLARSGSLREA 395
++ L+ C+ + + G+QI +++ K GF + ++ + ++D+ + + +
Sbjct: 313 PSIRPFMSFLNFCSRNSDIQSGKQIHCYVL--KMGFDVSSLHVQSALIDMYGKCNGIENS 370
Query: 396 ---FEVMRCMPFDPTKAMWGSLL 415
++ + C+ + ++ SL+
Sbjct: 371 ALLYQSLPCLNLECCNSLMTSLM 393
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 112/229 (48%), Gaps = 10/229 (4%)
Query: 171 IYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQ 230
+Y HN + S L S + FDEM+ RDVV++ ++I G G A+ + +M
Sbjct: 46 VYTHNRRIDELIKSGNLLSA-HEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMV 104
Query: 231 YAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVE 290
G+ + T + L+ C+D G +H + G+ ++ + +AL+ +YA V+
Sbjct: 105 SCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVD 164
Query: 291 EGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACN 350
+++F + ++N+ N +++ + ++ RME +GV + +T ++ C+
Sbjct: 165 VALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCS 224
Query: 351 HSGLVDMGRQIFGFLVEGKYG----FIPN--VKHYACMVDLLARSGSLR 393
H LV G+Q+ +V+ + F+ N V +Y+ DL SGS+R
Sbjct: 225 HDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDL---SGSMR 270
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 167/351 (47%), Gaps = 42/351 (11%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
++ +N+L+ +++ + LS+F M + P YTF KS C + Q
Sbjct: 381 NIVCWNALLSGYAN----KDGPICLSLFLQMLQMGFRPTEYTFSTALKS----CCVTELQ 432
Query: 157 SVHAHVLKLGHLHDIYVHNSLLGVYAASPRL----------------------------- 187
+H+ ++++G+ + YV +SL+ YA + +
Sbjct: 433 QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRR 492
Query: 188 --FSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNAL 245
+ +L + D VSW + I + ++ + F+ M + + P++ T V+ L
Sbjct: 493 GQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSIL 552
Query: 246 AACADSGAVEMGAWIHDFIRRNGWEL-DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNV 304
+ C+ + +G+ IH I + + D + LIDMY KCG + ++VF +EKN+
Sbjct: 553 SLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNL 612
Query: 305 FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGF 364
TW A+I L + G+EA+ F G + D V+ +++L+AC H G+V G +F
Sbjct: 613 ITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQK 672
Query: 365 LVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLL 415
+ + YG P + HY C VDLLAR+G L+EA ++R MPF +W + L
Sbjct: 673 MKD--YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 108/230 (46%), Gaps = 9/230 (3%)
Query: 138 TFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDE 197
+F + K +S ++ +H K G +I V NSL+ Y + ++F +
Sbjct: 217 SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNT-HMAERMFQD 275
Query: 198 MTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMG 257
D+VSW +I + AL F M G +PN+ T V+ L + + G
Sbjct: 276 AGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG 335
Query: 258 AWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALA 317
IH + +NG E +VLG ALID YAKCG +E+ F +++KN+ WNA++ G A
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-N 394
Query: 318 KSGEEAIRLFNRMEQDGVRADEVTLLAVLSACN-------HSGLVDMGRQ 360
K G + LF +M Q G R E T L +C HS +V MG +
Sbjct: 395 KDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYE 444
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 155/363 (42%), Gaps = 17/363 (4%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P + FN++I+ +S + + +F+ M LPN T L A
Sbjct: 75 MPERNKVSFNTIIKGYSK---YGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSC--ASLDV 129
Query: 153 AQAQSVHAHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
+H LK G + D +V LL +Y L + Q+F++M + + +W M+
Sbjct: 130 RAGTQLHGLSLKYGLFMADAFVGTCLLCLYG-RLDLLEMAEQVFEDMPFKSLETWNHMMS 188
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ G + + F ++ G + + + L + +++ +H + G +
Sbjct: 189 LLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDC 248
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
++ + +LI Y KCG R+F ++ +WNA+I A +++ +A++LF M
Sbjct: 249 EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ G ++ T ++VL + L+ GRQI G L+ K G + ++D A+ G+
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI--KNGCETGIVLGNALIDFYAKCGN 366
Query: 392 LREA---FEVMRCMPFDPTKAMWGSLLVS-SKSQGDLEFSEFVARKLVELEPANSAYYVH 447
L ++ F+ +R D W +LL + G + S F+ + P +
Sbjct: 367 LEDSRLCFDYIR----DKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTA 422
Query: 448 LSN 450
L +
Sbjct: 423 LKS 425
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 6/213 (2%)
Query: 152 FAQAQSVHAHVLKLGH--LHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVM 209
FA+ +++HA + L L +YV N+++ +Y + SL ++FD+M R+ VS+ +
Sbjct: 28 FARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEV-SLAGKVFDQMPERNKVSFNTI 86
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG- 268
I G+ G D A F +M+Y G PN+ T V+ L +CA S V G +H + G
Sbjct: 87 IKGYSKYGDVDKAWGVFSEMRYFGYLPNQST-VSGLLSCA-SLDVRAGTQLHGLSLKYGL 144
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFN 328
+ D +GT L+ +Y + +E +VF + K++ TWN ++ L +E + F
Sbjct: 145 FMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFR 204
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQI 361
+ + G E + L VL + +D+ +Q+
Sbjct: 205 ELVRMGASLTESSFLGVLKGVSCVKDLDISKQL 237
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 13/287 (4%)
Query: 12 STTLPFCSVLTFD----YTLRMSGFSDRAVTLLKDFCHSRLHVQQIQAQLILHNLQSNPT 67
ST L C V +RM G+ D +L S Q + L+L + S PT
Sbjct: 420 STALKSCCVTELQQLHSVIVRM-GYEDNDY-VLSSLMRSYAKNQLMNDALLLLDWASGPT 477
Query: 68 --IAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFA 125
+ + + S + +P +N I A S S +H + +F
Sbjct: 478 SVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVI---ELFK 534
Query: 126 HMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLG-HLHDIYVHNSLLGVYAAS 184
HM ++ I P+ YTF + S C S+H + K D +V N L+ +Y
Sbjct: 535 HMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKC 594
Query: 185 PRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNA 244
+ S+ ++F+E +++++WT +I G +AL F++ G P+RV+ ++
Sbjct: 595 GSIRSV-MKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISI 653
Query: 245 LAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEE 291
L AC G V+ G + ++ G E ++ +D+ A+ G ++E
Sbjct: 654 LTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKE 700
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 7/298 (2%)
Query: 196 DEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVE 255
D R+ +W ++I G+ GK D+AL F +MQ++ PN VT+++ L ACA+ +
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAK 541
Query: 256 MGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLA 315
M IH + R + + AL D YAK G +E +F ++ K++ TWN++I G
Sbjct: 542 MVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYV 601
Query: 316 LAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPN 375
L S A+ LFN+M+ G+ + TL +++ A G VD G+++F + + Y IP
Sbjct: 602 LHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF-YSIANDYHIIPA 660
Query: 376 VKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLV 435
++H + MV L R+ L EA + ++ M +W S L + GD++ + A L
Sbjct: 661 LEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLF 720
Query: 436 ELEPANSAYYVHLSNLY---AEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQGHT 490
LEP N+A +S +Y A++GR + K R +D L K LG S +EV HT
Sbjct: 721 SLEPENTATESIVSQIYALGAKLGRSLEGNKPR---RDNLLKKPLGQSWIEVRNLIHT 775
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 167/378 (44%), Gaps = 75/378 (19%)
Query: 97 HVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
++F ++++I A+S + +F M ++ +LP+ + FP + + + +
Sbjct: 145 NLFTWSAMIGAYSRENRWREVA---KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGK 201
Query: 157 SVHAHVLKL-------------------GHL------------HDIYVHNSLLGVYAASP 185
+H+ V+KL G L D+ NS+L Y +
Sbjct: 202 VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNG 261
Query: 186 R---LFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFD---------------------- 220
+ L +++ E +V+W ++I G+ GK D
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Query: 221 -------------DALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRN 267
AL F +M AGV PN VT+++A++AC+ + G+ +H +
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 268 GWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLF 327
G+ DV++G +L+DMY+KCG++E+ +VF SVK K+V+TWN++I G A +A LF
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELF 441
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIP-NVKHYACMVDLL 386
RM+ +R + +T ++S +G D G + F K G + N + ++
Sbjct: 442 TRMQDANLRPNIITWNTMISGYIKNG--DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGY 499
Query: 387 ARSGSLREAFEVMRCMPF 404
++G EA E+ R M F
Sbjct: 500 IQNGKKDEALELFRKMQF 517
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 7/235 (2%)
Query: 170 DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM 229
D++V LL +YA + R++FD M R++ +W+ MI + ++ + F M
Sbjct: 114 DVFVETKLLSMYAKCG-CIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 230 QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRV 289
GV P+ L CA+ G VE G IH + + G + + +++ +YAKCG +
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 232
Query: 290 EEGVRVFSSVKEKNVFTWNAVIKGLALAKSG--EEAIRLFNRMEQDGVRADEVTLLAVLS 347
+ + F ++E++V WN+V+ LA ++G EEA+ L ME++G+ VT ++
Sbjct: 233 DFATKFFRRMRERDVIAWNSVL--LAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 348 ACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
N G D + + +G +V + M+ L +G +A ++ R M
Sbjct: 291 GYNQLGKCDAAMDLMQKME--TFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 41/320 (12%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
VF + ++I H+ + +L +F M ++PN T + S Q
Sbjct: 317 VFTWTAMISGLIHNGMRYQAL---DMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VH+ +K+G + D+ V NSL+ +Y+ +L R++FD + ++DV +W MI G+ AG
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED-ARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
A F +MQ A + PN +T + SG + +NG E G
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMI-----SGYI-----------KNGDE-----GE 471
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
A+ D++ R+E+ +V ++N TWN +I G +EA+ LF +M+
Sbjct: 472 AM-DLFQ---RMEKDGKV-----QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
+ VT+L++L AC + M R+I G ++ I VK+ + D A+SG + +
Sbjct: 523 NSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN--ALTDTYAKSGDIEYSRT 580
Query: 398 VMRCMPFDPTKAM--WGSLL 415
+ M TK + W SL+
Sbjct: 581 IFLGM---ETKDIITWNSLI 597
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 11/265 (4%)
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW--ELDVV 274
G +A A + + G R T + L +C DSG++ +G +H R G E DV
Sbjct: 60 GSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILH---ARFGLFTEPDVF 116
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+ T L+ MYAKCG + + +VF S++E+N+FTW+A+I + E +LF M +DG
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
V D+ +L C + G V+ G+ I ++ K G ++ ++ + A+ G L
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVI--KLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 395 AFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE--LEPANSAYYVHLSNLY 452
A + R M A W S+L++ G E + + +++ + + P + + + Y
Sbjct: 235 ATKFFRRMRERDVIA-WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG-Y 292
Query: 453 AEMGRWDDVEKVRGMMKDRQLTKDL 477
++G+ D + M+ +T D+
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADV 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLK--LGHLHDIYVHNSLL 178
L +F M + +PN T L + + + +H VL+ L +H V N+L
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIH--AVKNALT 566
Query: 179 GVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR 238
YA S + R +F M +D+++W +I G+ G + AL F QM+ G+ PNR
Sbjct: 567 DTYAKSGDI-EYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNR 625
Query: 239 VTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG--TALIDMYAKCGRVEEGVRVF 296
T+ + + A G V+ G + I N + + L +A++ +Y + R+EE ++
Sbjct: 626 GTLSSIILAHGLMGNVDEGKKVFYSI-ANDYHIIPALEHCSAMVYLYGRANRLEEALQF- 683
Query: 297 SSVKEKNVFT----WNAVIKG 313
++E N+ + W + + G
Sbjct: 684 --IQEMNIQSETPIWESFLTG 702
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 186/388 (47%), Gaps = 10/388 (2%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
V + +N+L+ F + H L L +F M + + ++ +
Sbjct: 377 VTEKNTITYNALMAGFCRNGH---GLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEK 433
Query: 153 AQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR--DVVSWTVMI 210
++ +H +K G + + +LL + R+ ++FD+ + T +I
Sbjct: 434 KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMAD-AEEMFDQWPSNLDSSKATTSII 492
Query: 211 MGFRNAGKFDDALLAFEQ-MQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
G+ G D A+ F + + + + V++ LA C G EMG IH + + G+
Sbjct: 493 GGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY 552
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
D+ LG +LI MYAKC ++ +++F++++E +V +WN++I L ++G+EA+ L++R
Sbjct: 553 FSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSR 612
Query: 330 MEQDGVRADEVTLLAVLSACNH--SGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA 387
M + ++ D +TL V+SA + S + R +F ++ Y P +HY V +L
Sbjct: 613 MNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLF-LSMKTIYDIEPTTEHYTAFVRVLG 671
Query: 388 RSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVH 447
G L EA + + MP P ++ +LL S + + ++ VA+ ++ +P + Y+
Sbjct: 672 HWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYIL 731
Query: 448 LSNLYAEMGRWDDVEKVRGMMKDRQLTK 475
SN+Y+ G W E +R M++R K
Sbjct: 732 KSNIYSASGFWHRSEMIREEMRERGYRK 759
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 157/361 (43%), Gaps = 52/361 (14%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTIL-PNHYTFPFLFKSLSAPCHFAQ 154
P V + +LI FS + + L +F M + ++ PN YTF + + F+
Sbjct: 143 PTVVSYTALISGFSRLNLE---IEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL 199
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCR---QLFDEMTHRDVVSWTVMIM 211
+H ++K G L+ ++V NSL+ +Y S C +LFDE+ RDV SW ++
Sbjct: 200 GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSG--SSCDDVLKLFDEIPQRDVASWNTVVS 257
Query: 212 GFRNAGKFDDAL-LAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNG-- 268
GK A L +E + G + T+ L++C DS + G +H R G
Sbjct: 258 SLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLM 317
Query: 269 ----------------WEL-------------DVVLGTALIDMYAKCGRVEEGVRVFSSV 299
W++ D V T +I Y G V+ V +F++V
Sbjct: 318 QELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV 377
Query: 300 KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGR 359
EKN T+NA++ G G +A++LF M Q GV + +L + + AC +
Sbjct: 378 TEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSE 437
Query: 360 QIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSK 419
QI GF ++ F P ++ ++D+ R + +A E+ FD W S L SSK
Sbjct: 438 QIHGFCIKFGTAFNPCIQ--TALLDMCTRCERMADAEEM-----FD----QWPSNLDSSK 486
Query: 420 S 420
+
Sbjct: 487 A 487
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 11/230 (4%)
Query: 141 FLFKSLSAPCHFAQ-AQSVHAHVLKLGHLHDIYVHNSLLGVYA--ASPRLFSLCRQLFDE 197
F LSA H + ++VHA LKL + N+L+ Y PR L +F
Sbjct: 84 FYLLRLSAQYHDVEVTKAVHASFLKLRE-EKTRLGNALISTYLKLGFPREAIL---VFVS 139
Query: 198 MTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAG-VAPNRVTMVNALAACADSGAVEM 256
++ VVS+T +I GF +AL F +M+ AG V PN T V L AC +
Sbjct: 140 LSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL 199
Query: 257 GAWIHDFIRRNGWELDVVLGTALIDMYAK--CGRVEEGVRVFSSVKEKNVFTWNAVIKGL 314
G IH I ++G+ V + +L+ +Y K ++ +++F + +++V +WN V+ L
Sbjct: 200 GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSL 259
Query: 315 ALAKSGEEAIRLFNRMEQ-DGVRADEVTLLAVLSACNHSGLVDMGRQIFG 363
+A LF M + +G D TL +LS+C S ++ GR++ G
Sbjct: 260 VKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHG 309
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
LG ALI Y K G E + VF S+ V ++ A+I G + EA+++F RM + G
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 335 -VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNV 376
V+ +E T +A+L+AC +G QI G +V K GF+ +V
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIV--KSGFLNSV 216
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 162/330 (49%), Gaps = 50/330 (15%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P V +N+++ ++ + ++L +F M R + PN T+ + + C F
Sbjct: 224 MPEKSVVSWNAMLSGYAQNGFTEDAL---RLFNDMLRLGVRPNETTWVIVISA----CSF 276
Query: 153 AQAQSVHAHVLKLGHLHDI----YVHNSLLGVYA------ASPRLF-------------- 188
S+ ++KL + +V +LL ++A ++ R+F
Sbjct: 277 RADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNA 336
Query: 189 -----------SLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM-QYAGVAP 236
S RQLFD M R+VVSW +I G+ + G+ A+ FE M Y P
Sbjct: 337 MISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP 396
Query: 237 NRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVF 296
+ VTM++ L+AC +E+G I D+IR+N +L+ +LI MYA+ G + E RVF
Sbjct: 397 DEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVF 456
Query: 297 SSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVD 356
+KE++V ++N + A G E + L ++M+ +G+ D VT +VL+ACN +GL+
Sbjct: 457 DEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLK 516
Query: 357 MGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
G++IF + P HYACM DLL
Sbjct: 517 EGQRIFKSIRN------PLADHYACM-DLL 539
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 187/474 (39%), Gaps = 114/474 (24%)
Query: 49 HVQQIQAQLILHN-LQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRA 107
+ QI AQLI+ N L A I+ C V P+VF+ NS+ +
Sbjct: 21 QLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKY 80
Query: 108 FSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGH 167
FS ++ L ++ R I+P+ ++FP + KS Q A V KLG
Sbjct: 81 FSKMDMANDVL---RLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQ-----ALVEKLGF 132
Query: 168 LHDIYVHNSLLGVYA------ASPRLFSLCRQ------------------------LFDE 197
D YV N ++ +Y ++ ++F Q LFD
Sbjct: 133 FKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDM 192
Query: 198 MTHRDVVSWTVMIMGF------RNAGKF-------------------------DDALLAF 226
M DVVSWTVMI GF NA K+ +DAL F
Sbjct: 193 MPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLF 252
Query: 227 EQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKC 286
M GV PN T V ++AC+ + + I L+ + TAL+DM+AKC
Sbjct: 253 NDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKC 312
Query: 287 GRVEEGVRVFSSV-KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV---------- 335
++ R+F+ + ++N+ TWNA+I G A +LF+ M + V
Sbjct: 313 RDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGY 372
Query: 336 ----------------------RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFI 373
+ DEVT+++VLSAC H +++G I ++ + +
Sbjct: 373 AHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKL- 431
Query: 374 PNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTK----AMWGSLLVSSKSQGD 423
N Y ++ + AR G+L EA V FD K + +L + + GD
Sbjct: 432 -NDSGYRSLIFMYARGGNLWEAKRV-----FDEMKERDVVSYNTLFTAFAANGD 479
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 134/345 (38%), Gaps = 45/345 (13%)
Query: 147 SAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLC----------RQLFD 196
S F Q +HA ++ V NSL + R+ S C R +FD
Sbjct: 14 SQALTFPQLNQIHAQLI---------VFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFD 64
Query: 197 EMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEM 256
+T +V M F +D L +EQ G+ P+ + + + A
Sbjct: 65 SVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS-----AGRF 119
Query: 257 GAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLAL 316
G + + G+ D + ++DMY K VE +VF + ++ WN +I G
Sbjct: 120 GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWK 179
Query: 317 AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNV 376
+ EEA +LF+ M ++ D V+ +++ ++ R+ F + E +V
Sbjct: 180 WGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPE------KSV 229
Query: 377 KHYACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARK 433
+ M+ A++G +A F M + P + W ++ + + D + R
Sbjct: 230 VSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLT----RS 285
Query: 434 LVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLG 478
LV+L V L N + + D K R + R++ +LG
Sbjct: 286 LVKLIDEKR---VRL-NCFVKTALLDMHAKCRDIQSARRIFNELG 326
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 175/318 (55%), Gaps = 6/318 (1%)
Query: 170 DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM 229
D +N L+ + S F+ Q+ +M + + SW ++ G+ N+ K +A F +M
Sbjct: 253 DTVTYNELIDAFVKSGD-FNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Query: 230 QYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRV 289
+GV + ++ LAA A V G+ IH + G + VV+ +ALIDMY+KCG +
Sbjct: 312 HSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGML 371
Query: 290 EEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG-VRADEVTLLAVLSA 348
+ +F ++ KN+ WN +I G A EAI+LFN+++Q+ ++ D T L +L+
Sbjct: 372 KHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAV 431
Query: 349 CNHSGL-VDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPT 407
C+H + +++ F ++ +Y P+V+H ++ + + G + +A +V++ F
Sbjct: 432 CSHCEVPMEVMLGYFEMMIN-EYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYD 490
Query: 408 KAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYVH--LSNLYAEMGRWDDVEKVR 465
W +LL + ++ DL+ ++ VA K++EL A+ Y++ +SNLYA RW +V ++R
Sbjct: 491 GVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIR 550
Query: 466 GMMKDRQLTKDLGCSSVE 483
+M++ + K++G S ++
Sbjct: 551 KIMRESGVLKEVGSSWID 568
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 49/281 (17%)
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
+ +H +V K G + + + NSL+ Y S L ++FDEM DV+SW ++ G+
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLED-AHKVFDEMPDPDVISWNSLVSGYVQ 133
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL-DVV 274
+G+F + + F ++ + V PN + ALAACA +GA IH + + G E +VV
Sbjct: 134 SGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVV 193
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+G LIDMY KCG +++ V VF ++EK+ +WNA++
Sbjct: 194 VGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV----------------------- 230
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
++C+ +G +++G F + P+ Y ++D +SG
Sbjct: 231 ------------ASCSRNGKLELGLWFFHQMPN------PDTVTYNELIDAFVKSGDFNN 272
Query: 395 AFEVMRCMPFDPTKAMWGSLL---VSSKSQGDLEFSEFVAR 432
AF+V+ MP +P + W ++L V+S+ G E +EF +
Sbjct: 273 AFQVLSDMP-NPNSSSWNTILTGYVNSEKSG--EATEFFTK 310
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 134/333 (40%), Gaps = 49/333 (14%)
Query: 93 VPRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHF 152
+P P V +NSL+ + S + +F +HR+ + PN ++F + A H
Sbjct: 116 MPDPDVISWNSLVSGYVQSGRFQEGIC---LFLELHRSDVFPNEFSFTAALAA-CARLHL 171
Query: 153 AQ-AQSVHAHVLKLG-HLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMI 210
+ +H+ ++KLG ++ V N L+ +Y
Sbjct: 172 SPLGACIHSKLVKLGLEKGNVVVGNCLIDMYG---------------------------- 203
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G DDA+L F+ M+ + V+ +A+C+ +G +E+G W +
Sbjct: 204 ----KCGFMDDAVLVFQHME----EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP--- 252
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
D V LID + K G +V S + N +WN ++ G ++ EA F +M
Sbjct: 253 -DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
GVR DE +L VL+A +V G I K G V + ++D+ ++ G
Sbjct: 312 HSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHA--CAHKLGLDSRVVVASALIDMYSKCG 369
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGD 423
L+ A + MP +W ++ GD
Sbjct: 370 MLKHAELMFWTMP-RKNLIVWNEMISGYARNGD 401
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 5/223 (2%)
Query: 205 SWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFI 264
SW+ ++ G L A ++ G P+ +V+ L + G V + +H ++
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 265 RRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAI 324
++G+ + L +L+ Y +E+ +VF + + +V +WN+++ G + +E I
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIP-NVKHYACMV 383
LF + + V +E + A L+AC L +G I LV K G NV C++
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLV--KLGLEKGNVVVGNCLI 199
Query: 384 DLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEF 426
D+ + G + +A V + M T + W +++ S G LE
Sbjct: 200 DMYGKCGFMDDAVLVFQHMEEKDTVS-WNAIVASCSRNGKLEL 241
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 87/224 (38%), Gaps = 30/224 (13%)
Query: 55 AQLILHNLQSNPTIAHHFITVCQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFSHSHHH 114
A L+ +++ T++ + I S +P P +N LI AF S
Sbjct: 211 AVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDF 270
Query: 115 HNSLTPLS----------------------------IFAHMHRNTILPNHYTFPFLFKSL 146
+N+ LS F MH + + + Y+ + ++
Sbjct: 271 NNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAV 330
Query: 147 SAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSW 206
+A +HA KLG + V ++L+ +Y+ L +F M ++++ W
Sbjct: 331 AALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGML-KHAELMFWTMPRKNLIVW 389
Query: 207 TVMIMGFRNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAACA 249
MI G+ G +A+ F Q+ Q + P+R T +N LA C+
Sbjct: 390 NEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS 433
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 160/325 (49%), Gaps = 7/325 (2%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V + ++I A S H + + +F M + LPN +T + K+ S +
Sbjct: 249 VISWTAVISACSRKGH---GIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQ 305
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
VH+ V+K D++V SL+ +YA + S CR++FD M++R+ V+WT +I G
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEI-SDCRKVFDGMSNRNTVTWTSIIAAHAREG 364
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
++A+ F M+ + N +T+V+ L AC GA+ +G +H I +N E +V +G+
Sbjct: 365 FGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS 424
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
L+ +Y KCG + V + ++V +W A+I G + EA+ M Q+GV
Sbjct: 425 TLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
+ T + L AC +S + +GR I + K + NV + ++ + A+ G + EAF
Sbjct: 485 NPFTYSSALKACANSESLLIGRSIHS--IAKKNHALSNVFVGSALIHMYAKCGFVSEAFR 542
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQG 422
V MP + W ++++ G
Sbjct: 543 VFDSMP-EKNLVSWKAMIMGYARNG 566
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 127/233 (54%), Gaps = 7/233 (3%)
Query: 120 PLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLG 179
+S+F M R ++ N+ T + ++ + + +HA ++K ++Y+ ++L+
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVW 428
Query: 180 VY---AASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP 236
+Y S F++ +QL RDVVSWT MI G + G +AL ++M GV P
Sbjct: 429 LYCKCGESRDAFNVLQQL----PSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Query: 237 NRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVF 296
N T +AL ACA+S ++ +G IH ++N +V +G+ALI MYAKCG V E RVF
Sbjct: 485 NPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVF 544
Query: 297 SSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSAC 349
S+ EKN+ +W A+I G A EA++L RME +G D+ +LS C
Sbjct: 545 DSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 157/311 (50%), Gaps = 9/311 (2%)
Query: 133 LPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCR 192
N F L S F + VH +++K+G + ++ V +SL+ YA L S R
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALR 239
Query: 193 QLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSG 252
FD M +DV+SWT +I G A+ F M PN T+ + L AC++
Sbjct: 240 A-FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEK 298
Query: 253 AVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIK 312
A+ G +H + + + DV +GT+L+DMYAKCG + + +VF + +N TW ++I
Sbjct: 299 ALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIA 358
Query: 313 GLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGF 372
A GEEAI LF M++ + A+ +T++++L AC G + +G+++ ++ K
Sbjct: 359 AHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII--KNSI 416
Query: 373 IPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQG----DLEFSE 428
NV + +V L + G R+AF V++ +P + W +++ S G L+F +
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS-WTAMISGCSSLGHESEALDFLK 475
Query: 429 FVARKLVELEP 439
+ ++ VE P
Sbjct: 476 EMIQEGVEPNP 486
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 10/270 (3%)
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSL--CRQLFDEMTHRDVVSWTVMIMGF 213
+ +HA LK IY N+L+ ++ RL L R++FD M ++ V+WT MI G+
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLI---SSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGY 158
Query: 214 RNAGKFDDALLAFEQMQYAGVA-PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
G D+A FE G+ N V L C+ E+G +H + + G +
Sbjct: 159 LKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-N 217
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
+++ ++L+ YA+CG + +R F ++EK+V +W AVI + G +AI +F M
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
+E T+ ++L AC+ + GRQ+ +V K +V ++D+ A+ G +
Sbjct: 278 HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVV--KRMIKTDVFVGTSLMDMYAKCGEI 335
Query: 393 REAFEVMRCMPFDPTKAMWGSLLVSSKSQG 422
+ +V M + W S++ + +G
Sbjct: 336 SDCRKVFDGMS-NRNTVTWTSIIAAHAREG 364
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Query: 51 QQIQAQLILHNLQSNPTIAHHFITV-CQSHXXXXXXXXXXXXXVPRPHVFIFNSLIRAFS 109
+++ AQ+I ++++ N I + + C+ +P V + ++I S
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKC--GESRDAFNVLQQLPSRDVVSWTAMISGCS 462
Query: 110 HSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLH 169
H +L L M + + PN +T+ K+ + +S+H+ K L
Sbjct: 463 SLGHESEALDFLK---EMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALS 519
Query: 170 DIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQM 229
+++V ++L+ +YA S ++FD M +++VSW MIMG+ G +AL +M
Sbjct: 520 NVFVGSALIHMYAKCG-FVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 578
Query: 230 QYAGVAPNRVTMVNALAACAD 250
+ G + L+ C D
Sbjct: 579 EAEGFEVDDYIFATILSTCGD 599
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 148/300 (49%), Gaps = 8/300 (2%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHM-HRNTILPNHYTFPFLFKSLSAPCHFAQAQ 156
+ ++ ++I +H+ +L +F M I PN + L +
Sbjct: 280 IVVWGAMIAGLAHNKRQWEAL---GLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGK 336
Query: 157 SVHAHVLK-LGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
VHAHVLK ++ +VH+ L+ +Y + S R++F R+ +SWT ++ G+
Sbjct: 337 EVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMAS-GRRVFYGSKQRNAISWTALMSGYAA 395
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
G+FD AL + MQ G P+ VT+ L CA+ A++ G IH + +N + +V L
Sbjct: 396 NGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSL 455
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGV 335
T+L+ MY+KCG E +R+F ++++NV W A+I I +F M
Sbjct: 456 VTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH 515
Query: 336 RADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA 395
R D VT+ VL+ C+ + +G+++ G +++ ++ IP V A ++ + + G LR A
Sbjct: 516 RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSA 573
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 2/242 (0%)
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
Q + +H + LK L ++ + SL+ +Y+ + +LFD + R+V +WT MI +
Sbjct: 436 QGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG-VPEYPIRLFDRLEQRNVKAWTAMIDCY 494
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
+ F M + P+ VTM L C+D A+++G +H I + +E
Sbjct: 495 VENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIP 554
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQD 333
+ +I MY KCG + F +V K TW A+I+ + +AI F +M
Sbjct: 555 FVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSR 614
Query: 334 GVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
G + T AVLS C+ +G VD + F ++ Y P+ +HY+ +++LL R G +
Sbjct: 615 GFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLR-MYNLQPSEEHYSLVIELLNRCGRVE 673
Query: 394 EA 395
EA
Sbjct: 674 EA 675
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 135/283 (47%), Gaps = 5/283 (1%)
Query: 113 HHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIY 172
+N L+I ++ + I N TF L ++ + VH H+ G + +
Sbjct: 88 RQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 173 VHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGK--FDDALLAFEQMQ 230
+ L+ +Y A + +++FDE T +V SW ++ G +GK + D L F +M+
Sbjct: 148 LRTKLVHMYTACGSVKD-AQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMR 206
Query: 231 YAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVE 290
GV N ++ N + A + A+ G H +NG V L T+L+DMY KCG+V
Sbjct: 207 ELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVG 266
Query: 291 EGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM-EQDGVRADEVTLLAVLSAC 349
RVF + E+++ W A+I GLA K EA+ LF M ++ + + V L +L
Sbjct: 267 LARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVL 326
Query: 350 NHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
+ +G+++ +++ K ++ ++ ++DL + G +
Sbjct: 327 GDVKALKLGKEVHAHVLKSK-NYVEQPFVHSGLIDLYCKCGDM 368
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 198 MTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMG 257
+ HRD I F + AL + ++ G+ N T L AC ++ G
Sbjct: 78 IIHRD-------IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 258 AWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALA 317
+H IR NG E + L T L+ MY CG V++ +VF NV++WNA+++G ++
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 318 --KSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPN 375
K ++ + F M + GV + +L V + + + G + + K G +
Sbjct: 191 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAI--KNGLFNS 248
Query: 376 VKHYACMVDLLARSGSL---REAFEVMRCMPFDPTKAMWGSLL 415
V +VD+ + G + R F+ + + +WG+++
Sbjct: 249 VFLKTSLVDMYFKCGKVGLARRVFDEI----VERDIVVWGAMI 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
+ +H H+LK +V ++ +Y L S FD + + ++WT +I +
Sbjct: 538 GKELHGHILKKEFESIPFVSARIIKMYGKCGDLRS-ANFSFDAVAVKGSLTWTAIIEAYG 596
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAV-EMGAWIHDFIRRNGWELDV 273
F DA+ FEQM G PN T L+ C+ +G V E + + +R +
Sbjct: 597 CNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSE 656
Query: 274 VLGTALIDMYAKCGRVEEGVRV 295
+ +I++ +CGRVEE R+
Sbjct: 657 EHYSLVIELLNRCGRVEEAQRL 678
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 11/305 (3%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP++ +N++I A + F M RN + P+ TF L S +
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVA--KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMIM 211
A+++ + D++ +N+LL ++ F + Q+ + +VVS++ +I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
GF AG+FD+AL F +M+Y G+A +RV+ L+ G E I + G +
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
DVV AL+ Y K G+ +E +VF+ +K + N+ T++ +I G + +EA+ +F
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA 387
+ G+RAD V A++ A +GLV + + K G PNV Y ++D
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT--KEGISPNVVTYNSIIDAFG 595
Query: 388 RSGSL 392
RS ++
Sbjct: 596 RSATM 600
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 55/294 (18%)
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMI 210
A+ + G+ + +Y ++L+ Y S L +F+ M ++V++ +I
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSG-LHEEAISVFNSMKEYGLRPNLVTYNAVI 310
Query: 211 -------MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDF 263
M F+ KF F++MQ GV P+R+T + LA C+ G E + D
Sbjct: 311 DACGKGGMEFKQVAKF------FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 264 IRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKS 319
+ E DV L+D K G+++ + + + K NV +++ VI G A A
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 320 GEEAIRLFNRMEQDGVRADEV---TLLAVLSACNHS-GLVDMGRQ--------------- 360
+EA+ LF M G+ D V TLL++ + S +D+ R+
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 361 -IFGFLVEGKYG-------------FIPNVKHYACMVDLLARSGSLREAFEVMR 400
+ G+ +GKY +PN+ Y+ ++D ++ G +EA E+ R
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 116/270 (42%), Gaps = 46/270 (17%)
Query: 252 GAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE----KNVFTW 307
G V + I + G+ V +ALI Y + G EE + VF+S+KE N+ T+
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 308 NAVIKGLALAKSG---EEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGF 364
NAVI A K G ++ + F+ M+++GV+ D +T ++L+ C+ GL + R +F
Sbjct: 307 NAVID--ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 365 LVEGKYG---------------------------------FIPNVKHYACMVDLLARSGS 391
+ + +PNV Y+ ++D A++G
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 392 LREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELE-PANSAYYVH 447
EA F MR + + + +LL G E + + R++ + + Y
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 448 LSNLYAEMGRWDDVEKVRGMMKDRQLTKDL 477
L Y + G++D+V+KV MK + +L
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNL 514
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 112/210 (53%), Gaps = 1/210 (0%)
Query: 233 GVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEG 292
G P+R V +CA+ ++E +HD ++ + D L +I M+ +C + +
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 293 VRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHS 352
RVF + +K++ +W+ ++ + G++A+ LF M + G++ +E T L V AC
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 353 GLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWG 412
G ++ F + + ++G P +HY ++ +L + G L EA + +R +PF+PT W
Sbjct: 351 GGIEEAFLHFDSM-KNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWE 409
Query: 413 SLLVSSKSQGDLEFSEFVARKLVELEPANS 442
++ ++ GD++ +++ +V+++P+ +
Sbjct: 410 AMRNYARLHGDIDLEDYMEELMVDVDPSKA 439
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Query: 133 LPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCR 192
+P+ F LF+S + ++ VH H L+ D ++N ++ ++ + + +
Sbjct: 233 MPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSI-TDAK 291
Query: 193 QLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSG 252
++FD M +D+ SW +M+ + + G DDAL FE+M G+ PN T + ACA G
Sbjct: 292 RVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 351
Query: 253 AVEMGAWIHDFIRRN--GWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK-EKNVFTWNA 309
+E A++H +N G ++ + KCG + E + + E W A
Sbjct: 352 GIEE-AFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEA 410
Query: 310 V 310
+
Sbjct: 411 M 411
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 98/177 (55%), Gaps = 3/177 (1%)
Query: 248 CADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTW 307
C D+ A++ +H+FI + D+ ++I+MY+ CG VE+ + VF+S+ E+N+ TW
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 308 NAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVE 367
VI+ A GE+AI F+R +Q+G + D + AC G ++ G F + +
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 368 GKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDL 424
+YG IP ++HY +V +LA G L EA + M +P +W +L+ S+ GDL
Sbjct: 311 -EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDL 364
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 45/296 (15%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP+V ++SLI ++ LS M I PN TF L + F +
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLS---DMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL--------------------------F 188
A+ +H ++K DI+ +NSL+ + RL
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 189 SLCR--------QLFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP 236
C+ +LF EM+HR D V++T +I G + G D+A F+QM GV P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 237 NRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVF 296
+ +T L ++G +E + D+++++ +LD+ + T +I+ K G+V++G +F
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 297 SSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
S+ K NV T+N +I GL + +EA L +M++DG D T ++ A
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 135/324 (41%), Gaps = 30/324 (9%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP F +LI H+ + +++ M + PN T+ + L
Sbjct: 112 RPDTITFTTLIHGL---FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 168
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCR--------QLFDEMTHR----D 202
A ++ + D+ + N+++ SLC+ LF EM + +
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIID---------SLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 203 VVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHD 262
VV+++ +I + G++ DA M + PN VT + A G +HD
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 263 FIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVF----TWNAVIKGLALAK 318
+ + + D+ +LI+ + R+++ ++F + K+ F T+N +IKG +K
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 319 SGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKH 378
E+ LF M G+ D VT ++ H G D +++F +V G P++
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD--GVPPDIMT 397
Query: 379 YACMVDLLARSGSLREAFEVMRCM 402
Y+ ++D L +G L +A EV M
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYM 421
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 152/373 (40%), Gaps = 17/373 (4%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V IFN++I + H ++L ++F M I PN T+ L L + ++ A
Sbjct: 185 VVIFNTIIDSLCKYRHVDDAL---NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIMGF 213
+ + +++ ++ N+L+ + + F +L D+M R D+ ++ +I GF
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGK-FVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
+ D A FE M P+ T + S VE G + + G D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNR 329
V T LI G + +VF + ++ T++ ++ GL E+A+ +F+
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
M++ ++ D ++ +G VD G +F L G PNV Y M+ L
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL--SLKGVKPNVVTYNTMISGLCSK 478
Query: 390 GSLREAFEVMRCMPFD---PTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYV 446
L+EA+ +++ M D P + +L+ + GD S + R++ A +
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 538
Query: 447 HLSNLYAEMGRWD 459
L GR D
Sbjct: 539 GLVANMLHDGRLD 551
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 164/405 (40%), Gaps = 26/405 (6%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P +F FN L+ A + +S+ M R I N YT+ L +
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFD---LVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHR-DVVSWTVM 209
A ++ ++KLG+ I +SLL Y R+ +L Q+ EM +R D +++T +
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTL 121
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
I G K +A+ ++M G PN VT + G +++ + + +
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIR 325
E DVV+ +ID K V++ + +F ++ K NV T++++I L +A +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 326 LFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA----- 380
L + M + + + VT A++ A G ++ ++ K P++ Y
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI--KRSIDPDIFTYNSLING 299
Query: 381 -CMVDLLARSGSLREAFEVMRCMP-FDPTKAMWGSLLVSSKSQGDLE-FSEFVARKLVEL 437
CM D L ++ + E C P D + S + + E F E R LV
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV-- 357
Query: 438 EPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSV 482
++ Y L G D+ +KV M + D+ S+
Sbjct: 358 --GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 135/301 (44%), Gaps = 16/301 (5%)
Query: 127 MHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPR 186
M ++ LP+ + F L +++ F S+ + +LG H++Y +N L+ + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 187 LFSLCRQLFDEMT----HRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
+ SL L +M +V+ + ++ G+ + + DA+ +QM G P+ +T
Sbjct: 61 I-SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 243 NALAAC-ADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK- 300
+ + A E A + ++R G + ++V +++ K G ++ + + ++
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 301 ---EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDM 357
E +V +N +I L + ++A+ LF ME G+R + VT +++S G
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 358 GRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV---MRCMPFDPTKAMWGSL 414
Q+ ++E K PN+ + ++D + G EA ++ M DP + SL
Sbjct: 239 ASQLLSDMIEKKIN--PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 415 L 415
+
Sbjct: 297 I 297
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 12/247 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P++ FN+LI AF + ++ M + +I P+ +T+ L +A
Sbjct: 328 PNLVTFNALIDAFVKEGKF---VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIM 211
+ + ++ D+ +N+L+ + S R+ +LF EM+HR D V++T +I
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED-GTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G + G D+A F+QM GV P+ +T L ++G +E + D+++++ +L
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
D+ + T +I+ K G+V++G +F S+ K NV T+N +I GL + +EA L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 328 NRMEQDG 334
+M++DG
Sbjct: 564 KKMKEDG 570
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 154/373 (41%), Gaps = 17/373 (4%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V IFN++I + H ++L ++F M I PN T+ L L + ++ A
Sbjct: 260 VVIFNTIIDSLCKYRHVDDAL---NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIMGF 213
+ + +++ ++ N+L+ + + F +L+D+M R D+ ++ ++ GF
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGK-FVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
+ D A FE M P+ VT + S VE G + + G D
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNR 329
V T LI G + +VF + ++ T++ ++ GL E+A+ +F+
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
M++ ++ D ++ +G VD G +F L G PNV Y M+ L
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL--SLKGVKPNVVTYNTMISGLCSK 553
Query: 390 GSLREAFEVMRCMPFD---PTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYV 446
L+EA+ +++ M D P + +L+ + GD S + R++ A +
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 613
Query: 447 HLSNLYAEMGRWD 459
L GR D
Sbjct: 614 GLVANMLHDGRLD 626
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 133/329 (40%), Gaps = 44/329 (13%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + FN L+ A + +S+ M R I+ YT+ L +
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFD---VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHR-DVVSWTVM 209
A ++ ++KLG+ I +SLL Y R+ +L Q+ EM +R D +++T +
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTL 196
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
I G K +A+ ++M G PN VT G ++ +R
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVT---------------YGVVVNGLCKRGDT 241
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
+L + L + E ++ E +V +N +I L + ++A+ LF
Sbjct: 242 DLALNLLNKM-----------EAAKI-----EADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
ME G+R + VT +++S G Q+ ++E K PN+ + ++D +
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN--PNLVTFNALIDAFVKE 343
Query: 390 GSLREA---FEVMRCMPFDPTKAMWGSLL 415
G EA ++ M DP + SL+
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 137/350 (39%), Gaps = 49/350 (14%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P + +SL+ + H +++ + M P+ TF L L ++A
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR---PDTITFTTLIHGLFLHNKASEA 209
Query: 156 QSVHAHVLKLGHLHDIYVHNSL---LGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
++ +++ G ++ + + L + +L ++ DVV + +I
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAA-CADSGAVEMGAWIHDFIRRNGWEL 271
DDAL F++M+ G+ PN VT + ++ C+ + + D I +
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK-INP 328
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----------------------------- 302
++V ALID + K G+ E +++ + ++
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 303 ----------NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHS 352
+V T+N +IKG +K E+ LF M G+ D VT ++ H
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 353 GLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
G D +++F +V G P++ Y+ ++D L +G L +A EV M
Sbjct: 449 GDCDNAQKVFKQMVSD--GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 1/224 (0%)
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
GK AL + + + ++ C ++ ++ +H I + LD+
Sbjct: 233 GKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSN 292
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
L++MY+ CG E VF + EKN+ TW +I+ A GE+AI +F+R +++G
Sbjct: 293 HVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI 352
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
D + AC G VD G F + YG P+++ Y +V++ A G L EA
Sbjct: 353 PDGQLFRGIFYACGMLGDVDEGLLHFESMSR-DYGIAPSIEDYVSLVEMYALPGFLDEAL 411
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPA 440
E + MP +P +W +L+ S+ G+LE ++ A + L+P
Sbjct: 412 EFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPT 455
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 18/290 (6%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P V FNSLI+ + +H + +F M P+ +T+ L SL + +A
Sbjct: 398 PDVCTFNSLIQGLCLTRNHR---VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEM----THRDVVSWTVMIM 211
++ + G + +N+L+ + + + ++FDEM R+ V++ +I
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTRE-AEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G + + +DA +QM G P++ T + L G ++ A I + NG E
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNV----FTWNAVIKGLALAKSGEEAIRLF 327
D+V LI K GRVE ++ S++ K + +N VI+GL + EAI LF
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLF 633
Query: 328 NRM-EQDGVRADEVTLLAVLSA-CNHSGLVDMGRQIFGFLVE-GKYGFIP 374
M EQ+ D V+ V CN G + R+ FLVE + GF+P
Sbjct: 634 REMLEQNEAPPDAVSYRIVFRGLCNGGGPI---REAVDFLVELLEKGFVP 680
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 155/373 (41%), Gaps = 38/373 (10%)
Query: 128 HRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL 187
+++ P+ YTF L L H A + +L+ G+ D+Y +NS++
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS-------- 338
Query: 188 FSLCR--------QLFDEMTHRD----VVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA 235
LC+ ++ D+M RD V++ +I + ++A + G+
Sbjct: 339 -GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 236 PNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRV 295
P+ T + + + + + + +R G E D LID G+++E + +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 296 FSSVK----EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA-CN 350
++ ++V T+N +I G A EA +F+ ME GV + VT ++ C
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 351 HSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPF---DPT 407
+ D + + ++EG+ P+ Y ++ R G +++A ++++ M +P
Sbjct: 518 SRRVEDAAQLMDQMIMEGQK---PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 408 KAMWGSLLVSSKSQGDLEFSEFVAR----KLVELEPANSAYYVHLSNLYAEMGRWDDVEK 463
+G+L+ G +E + + R K + L P AY + L+ + + +
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP--HAYNPVIQGLFRKRKTTEAINL 632
Query: 464 VRGMMKDRQLTKD 476
R M++ + D
Sbjct: 633 FREMLEQNEAPPD 645
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 12/261 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+V FNSLI AF+ + +F M + +I PN T+ L +A
Sbjct: 308 PNVVTFNSLIDAFAK---EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIM 211
Q + ++ L D+ +N+L+ + + ++ +LF +M+ R + V++T +I
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD-GMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
GF A D+A + F+QM GV PN +T L +G +E + ++++++ E
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
D+ + + K G+VE+G +F S+ K +V +N +I G EEA LF
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Query: 328 NRMEQDGVRADEVTLLAVLSA 348
+M++DG D T ++ A
Sbjct: 544 IKMKEDGPLPDSGTYNTLIRA 564
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 136/316 (43%), Gaps = 14/316 (4%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP VF ++SLI + ++ LS M I PN TF L + + +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLS---DMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRD----VVSWTVMI 210
A+ + +++ +I +NSL+ + RL +Q+F M +D VV++ +I
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL-DEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
GF A K D + F M G+ N VT + + + + + +G
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVF----SSVKEKNVFTWNAVIKGLALAKSGEEAIRL 326
+++ L+D K G++E+ + VF S E +++T+N + +G+ A E+ L
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
F + GV+ D + ++S GL + +F + E G +P+ Y ++
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED--GPLPDSGTYNTLIRAH 565
Query: 387 ARSGSLREAFEVMRCM 402
R G + E+++ M
Sbjct: 566 LRDGDKAASAELIKEM 581
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 151/373 (40%), Gaps = 17/373 (4%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V I++++I + H ++L ++F M I P+ +T+ L L ++ A
Sbjct: 240 VVIYSTVIDSLCKYRHVDDAL---NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIMGF 213
+ + +L+ ++ NSL+ +A +L +LFDEM R ++V++ +I GF
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIE-AEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
+ D+A F M P+ VT + + V G + + R G +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNR 329
V T LI + + + VF + N+ T+N ++ GL E+A+ +F
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
+++ + D T + +G V+ G +F L G P+V Y M+ +
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL--SLKGVKPDVIAYNTMISGFCKK 533
Query: 390 GSLREAFEVMRCMPFD---PTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYV 446
G EA+ + M D P + +L+ + GD S + +++ A A
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Query: 447 HLSNLYAEMGRWD 459
L GR D
Sbjct: 594 GLVTDMLHDGRLD 606
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 135/316 (42%), Gaps = 12/316 (3%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + F+ L+ A + +S M + N YT+ + L +
Sbjct: 61 PFPSIVEFSKLLSAIAKMKKFD---LVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLS 117
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMI 210
A ++ ++KLG+ I NSLL + R+ +L Q+ + D V++T ++
Sbjct: 118 FALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 177
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G K +A+ E+M G P+ VT + G ++ + + + + E
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRL 326
DVV+ + +ID K V++ + +F+ + K +VFT++++I L +A RL
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
+ M + + + VT +++ A G + ++F +++ PN+ Y +++
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ--RSIDPNIVTYNSLINGF 355
Query: 387 ARSGSLREAFEVMRCM 402
L EA ++ M
Sbjct: 356 CMHDRLDEAQQIFTLM 371
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 2/220 (0%)
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
G + +A+ + ++ G A + + ++ C A+E +H+ I DV
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVR 336
A+I+MY+ C V++ ++VF + E N T +++ GEEAI LF R +++G +
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 337 ADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
+ V S C +G V G F + +YG +P+++HY + +LA SG L EA
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYR-EYGIVPSMEHYHSVTKMLATSGHLDEAL 276
Query: 397 EVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE 436
+ MP +P+ +W +L+ S+ GD+E + A +LVE
Sbjct: 277 NFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCA-ELVE 315
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 124/255 (48%), Gaps = 12/255 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+V +++L+ AF + L +F M R +I P+ T+ L L +A
Sbjct: 258 PNVITYSALLDAFVK---NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTV----MIM 211
+ ++ G L D+ +N+L+ + + R+ +LF EM+ R +VS TV +I
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED-GMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
GF AG D A F QM + G++P+ T L D+G +E I + +++ +L
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
D+V T +I K G+VEE +F S+ K ++ T+ ++ GL E L+
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 328 NRMEQDGVRADEVTL 342
+M+Q+G+ ++ TL
Sbjct: 494 TKMKQEGLMKNDCTL 508
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 173/394 (43%), Gaps = 18/394 (4%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
R ++ FN +I F LSI M + P+ T L +
Sbjct: 117 RNDLYTFNIVINCFCCCFQVS---LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMIM 211
A S+ ++++G+ DI +N+++ + R+ F +++ + +VV++T ++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G N+ ++ DA M + PN +T L A +G V + + + R +
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
D+V ++LI+ R++E ++F + K +V ++N +I G AK E+ ++LF
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA 387
M Q G+ ++ VT ++ +G VD ++ F + +G P++ Y ++ L
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM--DFFGISPDIWTYNILLGGLC 411
Query: 388 RSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLE--FSEFVARKLVELEPANS 442
+G L +A FE M+ D + +++ G +E +S F + L L+P
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 443 AYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKD 476
Y +S L + G +VE + MK L K+
Sbjct: 472 TYTTMMSGLCTK-GLLHEVEALYTKMKQEGLMKN 504
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 135/284 (47%), Gaps = 11/284 (3%)
Query: 127 MHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPR 186
M R + PN Y + + L C A+A+ + +++ G L D V+ +L+ +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 187 LFSLCRQLFDEMTHRD----VVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
+ + + F EM RD V+++T +I GF G +A F +M G+ P+ VT
Sbjct: 367 IRA-ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV--- 299
+ +G ++ +H+ + + G +VV T LID K G ++ + +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 300 -KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
+ N+FT+N+++ GL + + EEA++L E G+ AD VT ++ A SG +D
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
++I ++ GK G P + + +++ G L + +++ M
Sbjct: 546 QEILKEML-GK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 20/285 (7%)
Query: 202 DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALA-ACADSGAVEMGAWI 260
DV+S++ ++ G+ G+ D E M+ G+ PN + + C E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 261 HDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLAL 316
+ IR+ G D V+ T LID + K G + + F + + +V T+ A+I G
Sbjct: 340 SEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 317 AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNV 376
EA +LF+ M G+ D VT +++ +G + ++ +++ G PNV
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA--GCSPNV 456
Query: 377 KHYACMVDLLARSGSLREAFEVMRCM---PFDPTKAMWGSLLVSSKSQGDLEFSEFVARK 433
Y ++D L + G L A E++ M P + S++ G++E A K
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE----EAVK 512
Query: 434 LV-ELEP----ANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQL 473
LV E E A++ Y L + Y + G D +++ M + L
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 129/316 (40%), Gaps = 17/316 (5%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P V + ++I F + + +F M + P+ TF L H A
Sbjct: 384 PDVLTYTAIISGFCQIG---DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEM----THRDVVSWTVMIM 211
VH H+++ G ++ + +L+ L S +L EM ++ ++ ++
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS-ANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G +G ++A+ + + AG+ + VT + A SG ++ I + G +
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
+V L++ + G +E+G ++ + + K N T+N+++K + + + A ++
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD-LL 386
M GV D T ++ H +M F F GF +V Y+ ++ L
Sbjct: 620 KDMCSRGVGPDGKTYENLVKG--HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 387 ARSGSL--REAFEVMR 400
R L RE F+ MR
Sbjct: 678 KRKKFLEAREVFDQMR 693
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 12/252 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+V + +LI ++ + M + + PN +T+ + L + +A
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSAN---ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIM 211
+ G D + +L+ Y S + +++ EM + +V++ V++
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM-DKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
GF G +D M G+APN T + + ++ I+ + G
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
D L+ + K ++E +F +K K +V T++ +IKG K EA +F
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 328 NRMEQDGVRADE 339
++M ++G+ AD+
Sbjct: 690 DQMRREGLAADK 701
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 135/284 (47%), Gaps = 11/284 (3%)
Query: 127 MHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPR 186
M R + PN Y + + L C A+A+ + +++ G L D V+ +L+ +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 187 LFSLCRQLFDEMTHRD----VVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMV 242
+ + + F EM RD V+++T +I GF G +A F +M G+ P+ VT
Sbjct: 367 IRA-ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 243 NALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSV--- 299
+ +G ++ +H+ + + G +VV T LID K G ++ + +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 300 -KEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
+ N+FT+N+++ GL + + EEA++L E G+ AD VT ++ A SG +D
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM 402
++I ++ GK G P + + +++ G L + +++ M
Sbjct: 546 QEILKEML-GK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 20/285 (7%)
Query: 202 DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALA-ACADSGAVEMGAWI 260
DV+S++ ++ G+ G+ D E M+ G+ PN + + C E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 261 HDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLAL 316
+ IR+ G D V+ T LID + K G + + F + + +V T+ A+I G
Sbjct: 340 SEMIRQ-GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 317 AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNV 376
EA +LF+ M G+ D VT +++ +G + ++ +++ G PNV
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA--GCSPNV 456
Query: 377 KHYACMVDLLARSGSLREAFEVMRCM---PFDPTKAMWGSLLVSSKSQGDLEFSEFVARK 433
Y ++D L + G L A E++ M P + S++ G++E A K
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE----EAVK 512
Query: 434 LV-ELEP----ANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQL 473
LV E E A++ Y L + Y + G D +++ M + L
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 129/316 (40%), Gaps = 17/316 (5%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P V + ++I F + + +F M + P+ TF L H A
Sbjct: 384 PDVLTYTAIISGFCQIG---DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEM----THRDVVSWTVMIM 211
VH H+++ G ++ + +L+ L S +L EM ++ ++ ++
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS-ANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G +G ++A+ + + AG+ + VT + A SG ++ I + G +
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
+V L++ + G +E+G ++ + + K N T+N+++K + + + A ++
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD-LL 386
M GV D T ++ H +M F F GF +V Y+ ++ L
Sbjct: 620 KDMCSRGVGPDGKTYENLVKG--HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 387 ARSGSL--REAFEVMR 400
R L RE F+ MR
Sbjct: 678 KRKKFLEAREVFDQMR 693
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 12/252 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+V + +LI ++ + M + + PN +T+ + L + +A
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSAN---ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIM 211
+ G D + +L+ Y S + +++ EM + +V++ V++
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM-DKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
GF G +D M G+APN T + + ++ I+ + G
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
D L+ + K ++E +F +K K +V T++ +IKG K EA +F
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 328 NRMEQDGVRADE 339
++M ++G+ AD+
Sbjct: 690 DQMRREGLAADK 701
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 13/249 (5%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P VF +N LI + ++ LS M I P+ F L + +
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLS---DMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Query: 155 AQSVHAHVLKLGH-LHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVM 209
A+ ++ ++K H D+ +N+L+ + R+ ++F EM+ R + V++T +
Sbjct: 339 AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV-EEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
I GF A D+A + F+QM GV P+ +T L ++G VE + +++++
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIR 325
+LD+V T +I+ K G+VE+G +F S+ K NV T+ ++ G EEA
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 326 LFNRMEQDG 334
LF M++DG
Sbjct: 518 LFVEMKEDG 526
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 135/316 (42%), Gaps = 11/316 (3%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + F+ L+ A + + +S+ M I N YT+ +
Sbjct: 71 PFPSIVEFSKLLSAIAKMNKFD---LVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLS 127
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMI 210
A ++ ++KLG+ I NSLL + R+ +L Q+ + D V++T ++
Sbjct: 128 LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G K +A+ E+M G P+ VT + G ++ + + + + E
Sbjct: 188 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRL 326
DVV+ +ID K +++ +F+ ++ K +VFT+N +I L +A RL
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
+ M + + D V A++ A G + +++ +V+ K+ F P+V Y ++
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF-PDVVAYNTLIKGF 366
Query: 387 ARSGSLREAFEVMRCM 402
+ + E EV R M
Sbjct: 367 CKYKRVEEGMEVFREM 382
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP+V +NSLIR + ++ LS M I PN TF L + +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLS---DMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL------FSL------------------ 190
A+ ++ ++K DI+ ++SL+ + RL F L
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 191 --CR--------QLFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP 236
C+ +LF EM+ R + V++T +I GF A + D+A + F+QM GV P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 237 NRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVF 296
+ +T L ++G VE + ++++R+ E D+ +I+ K G+VE+G +F
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 297 SSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA 348
S+ K NV T+ ++ G EEA LF M+++G D T ++ A
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 167/397 (42%), Gaps = 20/397 (5%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P F FN+LI H+ + +++ M P+ T+ + L
Sbjct: 183 QPDSFTFNTLIHGL---FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMI 210
A S+ + + + ++N+++ + + LF EM ++ +VV++ +I
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNV-NDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
N G++ DA M + PN VT + A G + ++D + + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRL 326
D+ ++LI+ + R++E +F + K NV T+N +IKG AK +E + L
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
F M Q G+ + VT ++ + D + +F +V G +P++ Y+ ++D L
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD--GVLPDIMTYSILLDGL 476
Query: 387 ARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLE--FSEFVARKLVELEPAN 441
+G + A FE ++ +P + ++ G +E + F + L ++P N
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-N 535
Query: 442 SAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLG 478
Y + + + G ++ + + MK+ D G
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 137/329 (41%), Gaps = 44/329 (13%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + F+ L+ A + + +S+ M I N YT+ L +
Sbjct: 77 PFPSIVEFSKLLSAIAKMNKFD---LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMI 210
A +V A ++KLG+ DI NSLL + R+ SL Q+ + D ++ +I
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G + +A+ ++M G P+ VT G ++ +R
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVT---------------YGIVVNGLCKRG--- 235
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
D+ L +L+ + G++E GV + +N +I L K+ +A+ LF M
Sbjct: 236 -DIDLALSLLKKMEQ-GKIEPGVVI-----------YNTIIDALCNYKNVNDALNLFTEM 282
Query: 331 EQDGVRADEVTLLAVLSA-CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
+ G+R + VT +++ CN+ D R + ++E K PNV ++ ++D +
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASR-LLSDMIERKIN--PNVVTFSALIDAFVKE 339
Query: 390 GSLREA---FEVMRCMPFDPTKAMWGSLL 415
G L EA ++ M DP + SL+
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 118/287 (41%), Gaps = 18/287 (6%)
Query: 203 VVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHD 262
+V ++ ++ KFD + EQMQ G++ N T + + + +
Sbjct: 81 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLA 140
Query: 263 FIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE----KNVFTWNAVIKGLALAK 318
+ + G+E D+V +L++ + R+ + V + + E + FT+N +I GL
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 319 SGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKH 378
EA+ L +RM G + D VT V++ G +D+ + + +GK P V
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK--IEPGVVI 258
Query: 379 YACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLL-----VSSKSQGDLEFSEFV 430
Y ++D L ++ +A F M P + SL+ S S+ +
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 431 ARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDL 477
RK+ N + L + + + G+ + EK+ M R + D+
Sbjct: 319 ERKI----NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 12/252 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P VF FN+LI A + + M R ++ P+ T+ L L +A
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAE---EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVV----SWTVMIM 211
+ + ++ G D+ ++ L+ Y S ++ +LF EM+ R VV ++T++I
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILINGYCKSKKV-EHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G+ AGK + A F +M + GV PN +T L D+G +E I +++NG +
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVF--TWNAVIKGLALAKSG--EEAIRLF 327
D+V +I K G V + ++ S+ + + W L L K G EA LF
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 328 NRMEQDGVRADE 339
+M++DG+ +E
Sbjct: 490 RKMKEDGILPNE 501
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 146/320 (45%), Gaps = 16/320 (5%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P+V I+N++I S N+L L+ M ++ I P+ T+ L L + ++
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLN---RMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMI 210
A + + + K D++ N+L+ R+ S + ++EM R D+V+++++I
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRV-SEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G + D+A F M G P+ VT + S VE G + + + G
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 271 LDVVLGTALIDMYAKCGRV---EEGVR--VFSSVKEKNVFTWNAVIKGLALAKSGEEAIR 325
+ V T LI Y + G++ EE R VF V N+ T+N ++ GL E+A+
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV-HPNIITYNVLLHGLCDNGKIEKALV 417
Query: 326 LFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
+ M+++G+ AD VT ++ +G V I+ L G +P++ Y M+
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL--NCQGLMPDIWTYTTMMLG 475
Query: 386 LARSGSLREAFEVMRCMPFD 405
L + G REA + R M D
Sbjct: 476 LYKKGLRREADALFRKMKED 495
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 14/319 (4%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + F+ L+ A S + + ++ M I N T L +
Sbjct: 77 PLPSIADFSRLLSAISKMKKYD---VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLS 133
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT----HRDVVSWTVM 209
A S ++KLGH I SLL + R++ +FD+M +VV + +
Sbjct: 134 LALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYD-ALYMFDQMVGMGYKPNVVIYNTI 192
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
I G + + D+AL +M+ G+ P+ VT + ++ SG + + +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIR 325
DV ALID K GRV E + + + ++ T++ +I GL + +EA
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 326 LFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
+F M G D VT +++ S V+ G ++F + + G + N Y ++
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM--SQRGVVRNTVTYTILIQG 370
Query: 386 LARSGSLREAFEVMRCMPF 404
R+G L A E+ R M F
Sbjct: 371 YCRAGKLNVAEEIFRRMVF 389
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 13/288 (4%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
LS M + P+ TF L A + ++ +G+ ++ ++N+++
Sbjct: 136 LSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDG 195
Query: 181 YAASPRL---FSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
S ++ L ++ + DVV++ +I G ++G++ DA M + P+
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKC--GRVEEGVRV 295
T + AC G V ++ + R + D+V + LI Y C R++E +
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI--YGLCMYSRLDEAEEM 313
Query: 296 FSSVKEKNVF----TWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNH 351
F + K F T++ +I G +K E ++LF M Q GV + VT ++
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 352 SGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVM 399
+G +++ +IF +V G PN+ Y ++ L +G + +A ++
Sbjct: 374 AGKLNVAEEIFRRMVFC--GVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 218 KFDDALLAFEQMQYAGVAPNRVT---MVNALAACAD-SGAVE-MGAWIHDFIRRNGWELD 272
K+D + +EQMQ G+ N T ++N C+ S A+ +G I + G E
Sbjct: 96 KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI-----KLGHEPS 150
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSV----KEKNVFTWNAVIKGLALAKSGEEAIRLFN 328
+V +L++ + + RV + + +F + + NV +N +I GL +K + A+ L N
Sbjct: 151 IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLN 210
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
RME+DG+ D VT +++S SG ++ + K P+V + ++D +
Sbjct: 211 RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT--KREIYPDVFTFNALIDACVK 268
Query: 389 SGSLREA---FEVMRCMPFDPTKAMWGSLLV 416
G + EA +E M DP + SLL+
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTY-SLLI 298
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 168/404 (41%), Gaps = 31/404 (7%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P + +N+LI A+S + + M P YT+ + L + +A
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAF---ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVS----WTVMIM 211
+ V A +L+ G D + SLL + A ++F +M RDVV ++ M+
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLL-MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
F +G D AL+ F ++ AG+ P+ V + G + + + + + + G +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVF----TWNAVIKGLALAKSGEEAIRLF 327
DVV ++ K + E ++F+ + E+ +F T +I G + + A+ LF
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA 387
+M++ +R D VT +L G +D ++I+ +V + +P Y+ +V+ L
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE--ILPTPISYSILVNALC 561
Query: 388 RSGSLREAFEV---MRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAY 444
G L EAF V M PT + S++ G+ E K++ S
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI------SEG 615
Query: 445 YVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSSVEVEEQG 488
+V Y + + G +++ ++K G EEQG
Sbjct: 616 FVPDCISYNTL--------IYGFVREENMSKAFGLVKKMEEEQG 651
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 155/359 (43%), Gaps = 24/359 (6%)
Query: 123 IFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYA 182
++ + R+ + N YT + +L + + + V + G DI +N+L+ Y
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY- 280
Query: 183 ASPRLFSLCRQLFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR 238
+S L +L + M + V ++ +I G GK++ A F +M +G++P+
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 239 VTMVNAL-AACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS 297
T + L AC VE D R+ D+V ++++ ++ + G +++ + F+
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP-DLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 298 SVKEKNVFTWNAV----IKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSG 353
SVKE + N + I+G A+ L N M Q G D VT +L
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 354 LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTK---AM 410
++ ++F + E P+ ++D + G+L+ A E+ + M +
Sbjct: 460 MLGEADKLFNEMTE--RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517
Query: 411 WGSLLVSSKSQGDLEFSEFVARKLV--ELEPANSAYYVHLSNL-----YAEMGR-WDDV 461
+ +LL GD++ ++ + +V E+ P +Y + ++ L AE R WD++
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 144/342 (42%), Gaps = 19/342 (5%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P + F+S++ F+ S + +L F + ++P++ + L + + A
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALM---YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 156 QSVHAHVLKLGHLHDIYVHNSLL-GVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMI 210
++ +L+ G D+ +N++L G+ ++ +LF+EMT R D + T++I
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGL--CKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWI-HDFIRRNGW 269
G G +A+ F++M+ + + VT L G ++ I D + +
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKN----VFTWNAVIKGLALAKSGEEAIR 325
+ + L++ G + E RV+ + KN V N++IKG + + +
Sbjct: 548 PTPISY-SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 326 LFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
+M +G D ++ ++ + + + E + G +P+V Y ++
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 386 LARSGSLREAFEVMRCM---PFDPTKAMWGSLLVSSKSQGDL 424
R ++EA V+R M +P ++ + ++ SQ +L
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 13/251 (5%)
Query: 206 WTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNAL-AACADSGAVEMGAWIHDFI 264
+ ++I + A K +A AF ++ G + + NAL + G VE+ ++ I
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVS-IDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 265 RRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVF----TWNAVIKGLALAKSG 320
R+G ++V +++ K G++E+ S V+EK V+ T+N +I +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 321 EEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA 380
EEA L N M G T V++ G + +++F ++ + G P+ Y
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML--RSGLSPDSTTYR 344
Query: 381 CMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLE--FSEFVARKLV 435
++ + G + E F MR P + S++ G+L+ F + K
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 436 ELEPANSAYYV 446
L P N Y +
Sbjct: 405 GLIPDNVIYTI 415
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 154/378 (40%), Gaps = 52/378 (13%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P V + LI++ S +L ++ M I PN +T+ L SL + C F +A
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEAL---NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAA-------------------SPR-------LFS 189
+ + +L+ G + ++ +N+L+ Y SP +
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG 437
Query: 190 LCRQ-------LFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR 238
C+ + ++M R DVV++ +I G +G FD A M G+ P++
Sbjct: 438 YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 239 VTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSS 298
T + + + S VE + D + + G +VV+ TALID Y K G+V+E +
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 299 VKEKNV----FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGL 354
+ KN T+NA+I GL +EA L +M + G++ T ++ G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 355 VDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM---PFDPTKAMW 411
D F ++ G P+ Y + R G L +A ++M M P +
Sbjct: 618 FDHAYSRFQQMLSS--GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 412 GSLLVSSKSQGDLEFSEF 429
SL+ K GDL + F
Sbjct: 676 SSLI---KGYGDLGQTNF 690
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 151/386 (39%), Gaps = 74/386 (19%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+ +N LI+ + S+ H + + M +LP+ T+ L +F A
Sbjct: 426 PNTRTYNELIKGYCKSNVHK----AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIM 211
+ + + G + D + + S++ S R+ C LFD + + +VV +T +I
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC-DLFDSLEQKGVNPNVVMYTALID 540
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNAL--AACADSGAVEM------------- 256
G+ AGK D+A L E+M PN +T NAL CAD E
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTF-NALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 257 ----------------GAWIHDFIR-----RNGWELDVVLGTALIDMYAKCGRVEEGVRV 295
G + H + R +G + D T I Y + GR+ + +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 296 FSSVKEKNV----FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLS---- 347
+ ++E V FT++++IKG A + RM G + T L+++
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 348 ------------ACNHSGLV--DMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR 393
C S ++ D ++ +VE + PN K Y ++ + G+LR
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE--HSVTPNAKSYEKLILGICEVGNLR 777
Query: 394 EAFEV----MRCMPFDPTKAMWGSLL 415
A +V R P++ ++ +LL
Sbjct: 778 VAEKVFDHMQRNEGISPSELVFNALL 803
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 147/362 (40%), Gaps = 56/362 (15%)
Query: 123 IFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKL---GHLHDIYVHNSLLG 179
++ M + + PN YT+ K ++ C + + +V K+ G D + + SL+
Sbjct: 205 VYMEMLEDKVCPNIYTYN---KMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261
Query: 180 VYAASPRLFSLCRQLFDEM----THRDVVSWTVMIMGFRNAGKFDDALLAF--------- 226
Y L S + +F+EM R+ V++T +I G A + D+A+ F
Sbjct: 262 GYCQRKDLDSAFK-VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 227 --------------------------EQMQYAGVAPNRVTMVNALAACADSGAVEMGAWI 260
++M+ G+ PN T + + E +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 261 HDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLAL 316
+ G +V+ ALI+ Y K G +E+ V V ++ + N T+N +IKG
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC- 439
Query: 317 AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNV 376
+ +A+ + N+M + V D VT +++ SG D ++ + G +P+
Sbjct: 440 KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM--NDRGLVPDQ 497
Query: 377 KHYACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARK 433
Y M+D L +S + EA F+ + +P M+ +L+ G ++ + + K
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 434 LV 435
++
Sbjct: 558 ML 559
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 279 LIDMYAKCGRVEEGVRVFSSVKEKNV----FTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+++ Y K G VEE + S + E + FT+ ++I G K + A ++FN M G
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 335 VRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLRE 394
R +EV ++ + +D +F + + + P V+ Y ++ L S E
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE--CFPTVRTYTVLIKSLCGSERKSE 341
Query: 395 AFEVMRCMP---FDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE--LEPANSAYYVHLS 449
A +++ M P + L+ S SQ E + + +++E L P N Y L
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP-NVITYNALI 400
Query: 450 NLYAEMGRWDDVEKVRGMMKDRQLTKD 476
N Y + G +D V +M+ R+L+ +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPN 427
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 52/340 (15%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP+V +NSLIR + ++ LS M I PN TF L + +
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLS---DMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRD----VVSWTVMI 210
A+ ++ ++K DI+ ++SL+ + RL + +F+ M +D VV++ +I
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
GF A + ++ + F +M G+ N VT + +G +M I + +G
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVF----SSVKEKNVFTWNAVIKGLALAKSGEEAIRL 326
D++ + L+D K G++E+ + VF S E +++T+N +I+G+ A E+ L
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
F + GV+ PNV Y M+
Sbjct: 523 FCSLSLKGVK-------------------------------------PNVIIYTTMISGF 545
Query: 387 ARSGSLREAFEVMRCMPFD---PTKAMWGSLLVSSKSQGD 423
R G EA + R M D P + +L+ + GD
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 170/393 (43%), Gaps = 21/393 (5%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P+ FN+LI H+ + +++ M P+ +T+ + L
Sbjct: 182 QPNTVTFNTLIHGL---FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMI 210
A S+ + K D+ ++ +++ + LF EM ++ +VV++ +I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND-ALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
N G++ DA M + PN VT + A G + ++D + + +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRL 326
D+ ++LI+ + R++E +F + K NV T+N +IKG AK EE + L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
F M Q G+ + VT ++ +G DM ++IF +V G P++ Y+ ++D L
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD--GVPPDIITYSILLDGL 475
Query: 387 ARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLE--FSEFVARKLVELEPAN 441
+ G L +A FE ++ +P + ++ G +E + F + L ++P N
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-N 534
Query: 442 SAYYVHLSNLYAEMGRWDDVEKV-RGMMKDRQL 473
Y + + + G ++ + + R M +D L
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 160/393 (40%), Gaps = 25/393 (6%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + FN L+ A + + +S+ M I + Y++ L
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFD---LVISLGERMQNLRISYDLYSYNILINCFCRRSQLP 132
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMI 210
A +V ++KLG+ DI +SLL Y R+ +L Q+F + V++ +I
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G K +A+ ++M G P+ T + G +++ + + + E
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRL 326
DVV+ T +ID V + + +F+ + K NV T+N++I+ L +A RL
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
+ M + + + VT A++ A G + +++ ++ K P++ Y+ +++
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLINGF 370
Query: 387 ARSGSLREA---FEVMRCMPFDPTKAMWGSLL-----VSSKSQGDLEFSEFVARKLVELE 438
L EA FE+M P + +L+ +G F E R LV
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV--- 427
Query: 439 PANSAYYVHLSNLYAEMGRWDDVEKV-RGMMKD 470
N+ Y L + G D +K+ + M+ D
Sbjct: 428 -GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 136/308 (44%), Gaps = 18/308 (5%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
+ +F M ++ LP+ F L +++ F S+ + L +D+Y +N L+
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 124
Query: 181 Y---AASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
+ + P ++ ++ D+V+ + ++ G+ + + +A+ +QM PN
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 238 RVTMVNAL--AACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRV 295
VT N L + A E A I + R G + D+ +++ K G ++ + +
Sbjct: 185 TVTF-NTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 296 FSSVK----EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSA-CN 350
++ E +V + +I L K+ +A+ LF M+ G+R + VT +++ CN
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 351 HSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA---FEVMRCMPFDPT 407
+ D R + ++E K PNV ++ ++D + G L EA ++ M DP
Sbjct: 303 YGRWSDASR-LLSDMIERKIN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 408 KAMWGSLL 415
+ SL+
Sbjct: 360 IFTYSSLI 367
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 119/254 (46%), Gaps = 12/254 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+V FN+LI AF + ++ M + +I P+ +T+ L +A
Sbjct: 328 PNVVTFNALIDAFVK---EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIM 211
+ + ++ ++ +N+L+ + + R+ +LF EM+ R + V++T +I
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV-ELFREMSQRGLVGNTVTYTTLIH 443
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
GF A D+A + F+QM GV PN +T L +G +E + ++++R+ E
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
+ +I+ K G+VE+G +F S+ K +V +N +I G EEA LF
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 328 NRMEQDGVRADEVT 341
+M +DG D T
Sbjct: 564 RKMREDGPLPDSGT 577
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 123/276 (44%), Gaps = 12/276 (4%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP+V ++SLI + ++ LS M I PN TF L + +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLS---DMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRD----VVSWTVMI 210
A+ ++ ++K DI+ ++SL+ + RL + +F+ M +D VV++ +I
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
GF A + D+ + F +M G+ N VT + + + + + +G
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVK----EKNVFTWNAVIKGLALAKSGEEAIRL 326
+++ L+D K G++E+ + VF ++ E ++T+N +I+G+ A E+ L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIF 362
F + GV+ D + ++S GL + +F
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 150/328 (45%), Gaps = 21/328 (6%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+ ++R HS +++ +F M ++ LP+ + F L +++ F S+
Sbjct: 53 YREILRNGLHSMKLDDAI---GLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT----HRDVVSWTVMIMGFRNA 216
+ +LG H++Y +N L+ + ++ SL L +M +V+ + ++ G+ +
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQI-SLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAAC-ADSGAVEMGAWIHDFIRRNGWELDVVL 275
+ DA+ +QM G P+ +T + + A E A + ++R G + ++V
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVT 227
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVK----EKNVFTWNAVIKGLALAKSGEEAIRLFNRME 331
+++ K G ++ + + ++ E NV ++ VI L + ++A+ LF ME
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 332 QDGVRADEVTLLAVLSA-CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
GVR + +T +++S CN+ D R + ++E K PNV + ++D + G
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASR-LLSDMIERKIN--PNVVTFNALIDAFVKEG 344
Query: 391 SLREA---FEVMRCMPFDPTKAMWGSLL 415
L EA ++ M DP + SL+
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 112/273 (41%), Gaps = 20/273 (7%)
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAAC-ADSGAVEMGAWIHDFIRRNGWELDVVLG 276
KFD + E+MQ G++ N T N L C + + + + + G+E +V
Sbjct: 100 KFDLVISLGEKMQRLGISHNLYT-YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 158
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKE----KNVFTWNAVIKGLALAKSGEEAIRLFNRMEQ 332
++L++ Y R+ + V + + E + T+ +I GL L EA+ L +RM Q
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 333 DGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSL 392
G + + VT V++ G +D+ + + K NV Y+ ++D L +
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK--IEANVVIYSTVIDSLCKYRHE 276
Query: 393 REA---FEVMRCMPFDPTKAMWGSLL-----VSSKSQGDLEFSEFVARKLVELEPANSAY 444
+A F M P + SL+ S S+ + RK+ N
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI----NPNVVT 332
Query: 445 YVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDL 477
+ L + + + G+ + EK+ M R + D+
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 134/323 (41%), Gaps = 19/323 (5%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P + +N ++ F N +T S+ M + I P+ YT+ L +
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKIT--SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT----HRDVVSWTVMI 210
A V + G +D +N+LL VY S R + L +EM +V++ +I
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL-NEMVLNGFSPSIVTYNSLI 356
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
+ G D+A+ QM G P+ T L+ +G VE I + +R G +
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVK----EKNVFTWNAVIKGLALAKSGEEAIRL 326
++ A I MY G+ E +++F + ++ TWN ++ E +
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
F M++ G + T ++SA + G + ++ +++ G P++ Y ++ L
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA--GVTPDLSTYNTVLAAL 534
Query: 387 ARSGSLREAFEVM------RCMP 403
AR G ++ +V+ RC P
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKP 557
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/429 (19%), Positives = 174/429 (40%), Gaps = 63/429 (14%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+N+L+ + SH ++ + M N P+ T+ L + + +A +
Sbjct: 317 YNALLDVYGKSHRPKEAM---KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKN 373
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIMGFRNA 216
+ + G D++ + +LL + + ++ S +F+EM + ++ ++ I + N
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVES-AMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 217 GKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLG 276
GKF + + F+++ G++P+ VT LA +G + + ++R G+ +
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 277 TALIDMYAKCGRVEEGVRVFSSVKEKNVF----TWNAVIKGLALAKSGEEAIRLFNRMEQ 332
LI Y++CG E+ + V+ + + V T+N V+ LA E++ ++ ME
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 333 DGVRADEVTLLAVLSA-----------------------------------CNHSGLVDM 357
+ +E+T ++L A C+ L+
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 358 GRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSL 414
+ F L E GF P++ MV + R + +A + M+ F P+ A + SL
Sbjct: 613 AERAFSELKE--RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 415 LVSSKSQGDLEFSEFVARKLVE--LEPA----NSAYYVHLSNLYAEMGRWDDVEKVRGMM 468
+ D SE + R+++ ++P N+ Y + N R D ++ M
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNT-----RMRDASRIFSEM 725
Query: 469 KDRQLTKDL 477
++ + D+
Sbjct: 726 RNSGIVPDV 734
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 130/321 (40%), Gaps = 48/321 (14%)
Query: 202 DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP-------------------NRVTMV 242
DV S+T +I F N+G++ +A+ F++M+ G P N++T +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 243 ----------------NALAACADSGAV-EMGAWIHDFIRRNGWELDVVLGTALIDMYAK 285
N L C G++ + A + + ++ G+ D V AL+D+Y K
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 286 CGRVEEGVRVFSSVK----EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVT 341
R +E ++V + + ++ T+N++I A +EA+ L N+M + G + D T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 342 LLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA---FEV 398
+LS +G V+ IF + G PN+ + + + G E F+
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNA--GCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 399 MRCMPFDPTKAMWGSLLVSSKSQG-DLEFSE-FVARKLVELEPANSAYYVHLSNLYAEMG 456
+ P W +LL G D E S F K P + +S Y+ G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS-AYSRCG 503
Query: 457 RWDDVEKVRGMMKDRQLTKDL 477
++ V M D +T DL
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDL 524
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 155/403 (38%), Gaps = 67/403 (16%)
Query: 112 HHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDI 171
H + NS P+S +RN P L K S Q Q VL+
Sbjct: 56 HQNPNSRQPISSQTSRNRNRTRIGKSRDPNLGKPWSYHGLSPQGQ----QVLR------- 104
Query: 172 YVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG---KFDDALLAFE- 227
SL+ S +L S+ +LF+ + + + ++ + G KFD AL AF+
Sbjct: 105 ----SLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDW 160
Query: 228 ---QMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYA 284
Q Y + N V + ++ G V A + + ++ +G+ LDV T+LI +A
Sbjct: 161 FMKQKDYQSMLDNSVVAI-IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA 219
Query: 285 KCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLA-LAKSGEEAIRLFNRMEQDGVRADE 339
GR E V VF ++E + T+N ++ + + L +M+ DG+ D
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDA 279
Query: 340 VTLLAVLSACNHSGLVDMGRQIF------GFL-----------VEGKY------------ 370
T +++ C L Q+F GF V GK
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 371 ----GFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKA---MWGSLLVSSKSQGD 423
GF P++ Y ++ AR G L EA E+ M TK + +LL + G
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 424 LE--FSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKV 464
+E S F + +P N + +Y G++ ++ K+
Sbjct: 400 VESAMSIFEEMRNAGCKP-NICTFNAFIKMYGNRGKFTEMMKI 441
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 45/282 (15%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP VF ++SLI + ++ LS M I PN TF L + +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLS---DMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL------FSL------------------ 190
A+ ++ ++K DI+ ++SL+ + RL F L
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 191 --CR--------QLFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP 236
C+ +LF EM+ R + V++T +I GF A D+A + F+QM GV P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 237 NRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVF 296
N +T L +G + + ++++R+ E D+ +I+ K G+VE+G +F
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 297 SSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
++ K NV +N +I G S EEA L +M++DG
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 156/373 (41%), Gaps = 17/373 (4%)
Query: 98 VFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQS 157
V I+N++I H ++L ++F M I P+ +T+ L L ++ A
Sbjct: 258 VVIYNTIIDGLCKYKHMDDAL---NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIMGF 213
+ + +++ ++ ++L+ + +L +L+DEM R D+ +++ +I GF
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVE-AEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
+ D+A FE M PN VT + + VE G + + + G +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVKE----KNVFTWNAVIKGLALAKSGEEAIRLFNR 329
V T LI + + + VF + N+ T+N ++ GL +A+ +F
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
+++ + D T ++ +G V+ G ++F L G PNV Y M+ R
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL--SLKGVSPNVIAYNTMISGFCRK 551
Query: 390 GSLREAFEVMRCMPFD---PTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAYYV 446
GS EA +++ M D P + +L+ + GD E S + +++ A A +
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611
Query: 447 HLSNLYAEMGRWD 459
L GR D
Sbjct: 612 GLVTNMLHDGRLD 624
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 154/370 (41%), Gaps = 24/370 (6%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + FN L+ A + + +S+ M I + YT+ +
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFE---LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMI 210
A +V A ++KLG+ DI +SLL Y S R+ +L Q+ + D ++T +I
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G K +A+ +QM G P+ VT + G +++ + + + E
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRL 326
DVV+ +ID K +++ + +F+ + K +VFT++++I L +A RL
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
+ M + + + VT A++ A G + +++ ++ K P++ Y+ +++
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLINGF 373
Query: 387 ARSGSLREA---FEVMRCMPFDPTKAMWGSLL-----VSSKSQGDLEFSEFVARKLVELE 438
L EA FE+M P + +L+ +G F E R LV
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV--- 430
Query: 439 PANSAYYVHL 448
N+ Y L
Sbjct: 431 -GNTVTYTTL 439
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 173/393 (44%), Gaps = 30/393 (7%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P + + +L+ A + H H + LS+ + + +N + P+ F + + S + Q
Sbjct: 351 KPSLITYTTLVTALTRQKHFH---SLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQ 407
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCR----QLFDEMTHRDVVSWTVMI 210
A + + + G N+L+ Y +L R L DEM + + +++
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVT---MVNALAACADSGAVE---MGAWIHDFI 264
+ N K ++A +MQ GV P+ VT + A A + E + +H+ +
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 265 RRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE----KNVFTWNAVIKGLALAKSG 320
+ N V +++ Y + G++EE +R F +KE N+F +N++IKG
Sbjct: 528 KPN-----VRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDM 582
Query: 321 EEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA 380
+ + + ME+ GV+ D VT +++A + G + +I+ ++EG G P++ ++
Sbjct: 583 DGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG--GIDPDIHAFS 640
Query: 381 CMVDLLARSGSLREAFEV---MRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKL--- 434
+ AR+G +A ++ MR P ++ ++ S G+++ + V +K+
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 700
Query: 435 VELEPANSAYYVHLSNLYAEMGRWDDVEKVRGM 467
V L P + Y + W E ++ M
Sbjct: 701 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDM 733
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 98/236 (41%), Gaps = 11/236 (4%)
Query: 189 SLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAAC 248
S+ L +E ++++T ++ F L +++ G+ P+ + + A
Sbjct: 340 SIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINAS 399
Query: 249 ADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVF-----SSVKEKN 303
++SG ++ I + ++ +G + LI Y K G++EE R+ + + N
Sbjct: 400 SESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPN 459
Query: 304 VFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ-IF 362
T N +++ + EEA + +M+ GV+ D VT + A G I
Sbjct: 460 DRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMII 519
Query: 363 GFLVEGKYGFIPNVKHYACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLL 415
++ K PNV+ +V+ G + EA F M+ + P ++ SL+
Sbjct: 520 PRMLHNKVK--PNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLI 573
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 147/315 (46%), Gaps = 21/315 (6%)
Query: 171 IYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLA- 225
+ V+N+++GVY+ S + FS ++L D M R D++S+ +I +G L
Sbjct: 225 VQVYNAMMGVYSRSGK-FSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 226 -FEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYA 284
+ ++ +G+ P+ +T L+AC+ ++ + + + + + D+ A+I +Y
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 285 KCGRVEEGVRVFSSVKEKNVF----TWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEV 340
+CG E R+F ++ K F T+N+++ A ++ E+ ++ +M++ G DE+
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
T ++ G +D+ Q++ + +G G P+ Y ++D L ++ EA +M
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDM-KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 401 CM---PFDPTKAMWGSLLVSSKSQGDLEFSE--FVARKLVELEPANSAYYVHLSNLYAEM 455
M PT + +L+ G E +E F +P N AY V L L
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL--- 519
Query: 456 GRWDDVEKVRGMMKD 470
R ++ K G+ +D
Sbjct: 520 -RGNETRKAWGLYRD 533
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 155/344 (45%), Gaps = 35/344 (10%)
Query: 152 FAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRD-----VVSW 206
+ +A+SV ++ + G D+ NSL+ YA + R +F+ M RD V S
Sbjct: 768 WQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG-CYERARAIFNTMM-RDGPSPTVESI 825
Query: 207 TVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRR 266
+++ G+ ++ + E++Q G ++ +++ L A A +G + I+ ++
Sbjct: 826 NILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKA 885
Query: 267 NGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKN----VFTWNAVIKGLALAKSGEE 322
G+ + L +I++ K RV + + S ++E N + WN+++K + ++
Sbjct: 886 AGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKK 945
Query: 323 AIRLFNRMEQDGVRADEVTL-LAVLSACNHSGLVDMGRQIFGFLVEGK---YGFIPNVKH 378
++++ R+++ G+ DE T ++ C R G+L+ + G P +
Sbjct: 946 TVQVYQRIKETGLEPDETTYNTLIIMYCRDR------RPEEGYLLMQQMRNLGLDPKLDT 999
Query: 379 YACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLV 435
Y ++ + L +A FE + ++ + +++ S+ G S+ A KL+
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSG----SDSKAEKLL 1055
Query: 436 EL------EPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQL 473
++ EP + ++ + + Y+ G + EKV +KD ++
Sbjct: 1056 QMMKNAGIEPTLATMHLLMVS-YSSSGNPQEAEKVLSNLKDTEV 1098
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 153/349 (43%), Gaps = 17/349 (4%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
+ F+ M R + P + L + + ++ G ++ +N ++
Sbjct: 212 IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC 271
Query: 181 YAASPRLFSLCRQLFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP 236
+ R LF+EM R D V++ MI GF G+ DD + FE+M+ P
Sbjct: 272 MCKEGDV-EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP 330
Query: 237 NRVTMVNALAAC-ADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRV 295
+ +T NAL C G + +G + ++ NG + +VV + L+D + K G +++ ++
Sbjct: 331 DVIT-YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 296 FSSVKE----KNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNH 351
+ ++ N +T+ ++I + +A RL N M Q GV + VT A++
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 352 SGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMP---FDPTK 408
+ + ++FG + G IPN+ Y ++ ++ ++ A E++ + P
Sbjct: 450 AERMKEAEELFGKM--DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 409 AMWGSLLVSSKSQGDLEFSEFVARKLVELE-PANSAYYVHLSNLYAEMG 456
++G+ + S +E ++ V ++ E ANS Y L + Y + G
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 138/346 (39%), Gaps = 50/346 (14%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
P V +N+LI F L + M N + PN ++ L + Q
Sbjct: 329 EPDVITYNALINCFCKFGKLP---IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMIM 211
A + + ++G + + Y + SL+ L F L ++ +VV++T +I
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVT-------------------MVNALAA----- 247
G +A + +A F +M AGV PN + ++N L
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 248 ------------CADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRV 295
C+ +E + + ++ G + + ++ T L+D Y K G EG+ +
Sbjct: 506 DLLLYGTFIWGLCSLE-KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564
Query: 296 FSSVKEKN----VFTWNAVIKGLALAKSGEEAIRLFNRMEQD-GVRADEVTLLAVLSACN 350
+KE + V T+ +I GL K +A+ FNR+ D G++A+ A++
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 351 HSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAF 396
V+ +F +V+ G +P+ Y ++D + G++ EA
Sbjct: 625 KDNQVEAATTLFEQMVQK--GLVPDRTAYTSLMDGNFKQGNVLEAL 668
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 134/316 (42%), Gaps = 14/316 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P + F SLI F + ++ S+ M I P+ + + SL H A
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAM---SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLF---SLCRQLFDEMTHRDVVSWTVMIMG 212
S+ + G D+ ++ SL+ S R SL R + DV+++ +I
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
F GKF DA + +M +APN T + + G V+ + + G D
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFN 328
VV T+LI+ + KC +V++ +++F + +K N T+ +I+G A +F+
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKY-GFIPNVKHYACMVDLLA 387
M GV + T +L ++G V IF + + + G PN+ Y ++ L
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 388 RSGSLREA---FEVMR 400
+G L +A FE MR
Sbjct: 437 YNGKLEKALMVFEDMR 452
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 141/307 (45%), Gaps = 16/307 (5%)
Query: 101 FNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHA 160
+ ++R HS + +L +F HM + LP+ F L ++ F ++
Sbjct: 40 YREILRNGLHSLQFNEAL---DLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCD 96
Query: 161 HVLKLGHLHDIYVHNSLLGVYAASPRLF---SLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
H+ +G HD+Y N L+ + S + + S ++ D+V++T +I GF
Sbjct: 97 HLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN 156
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
+ ++A+ QM G+ P+ V + + +G V + D + G DVV+ T
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGE--EAIRLFNRME 331
+L++ GR + + + ++ +V T+NA+I A K G+ +A L+N M
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID--AFVKEGKFLDAEELYNEMI 274
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ + + T ++++ G VD RQ+F +L+E K G P+V Y +++ +
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMF-YLMETK-GCFPDVVAYTSLINGFCKCKK 332
Query: 392 LREAFEV 398
+ +A ++
Sbjct: 333 VDDAMKI 339
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 136/322 (42%), Gaps = 17/322 (5%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP V ++ SL+ +S ++ S+ M + I P+ TF L + F
Sbjct: 209 RPDVVMYTSLVNGLCNSGRWRDAD---SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD 265
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMI 210
A+ ++ ++++ +I+ + SL+ + RQ+F M + DVV++T +I
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEG-CVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
GF K DDA+ F +M G+ N +T + G + + + G
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK-------NVFTWNAVIKGLALAKSGEEA 323
++ L+ G+V++ + +F ++++ N++T+N ++ GL E+A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 324 IRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMV 383
+ +F M + + +T ++ +G V +F L G PNV Y M+
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK--GVKPNVVTYTTMI 502
Query: 384 DLLARSGSLREAFEVMRCMPFD 405
L R G EA + R M D
Sbjct: 503 SGLFREGLKHEAHVLFRKMKED 524
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 301 EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQ 360
E ++ T+ ++I G L EEA+ + N+M + G++ D V ++ + +G V+
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 361 IFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM---PFDPTKAMWGSLLVS 417
+F + YG P+V Y +V+ L SG R+A ++R M P + +L+ +
Sbjct: 199 LFDQM--ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 418 SKSQGDLEFSEFVARKLVELEPANSAY-YVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKD 476
+G +E + +++ + A + + Y L N + G D+ ++ +M+ + D
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 477 L 477
+
Sbjct: 317 V 317
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 143/310 (46%), Gaps = 20/310 (6%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+V FN+LI AF + + M + +I P+ T+ L +A
Sbjct: 326 PNVVTFNALIDAF---FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIM 211
+ + ++ L +I +N+L+ + R+ +LF EM+ R + V++T +I
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV-ELFREMSQRGLVGNTVTYTTIIQ 441
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
GF AG D A + F+QM V + +T L G ++ I +++++ EL
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK-NVFTWNAVIKGLALAKSGEEAIRLFNRM 330
++ + +I+ K G+V E +F S+ K +V T+N +I GL + +EA LF +M
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 331 EQDGVRADEVT----LLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLL 386
++DG + T + A L C+ + ++ +++ GF+ + + + ++L
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM------RSSGFVGDASTISLVTNML 615
Query: 387 ARSGSLREAF 396
G L ++F
Sbjct: 616 -HDGRLDKSF 624
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 144/346 (41%), Gaps = 41/346 (11%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+ +V IFN++I + H + +F M I PN T+ L L C++
Sbjct: 255 KANVVIFNTIIDSLCKYRHVE---VAVDLFTEMETKGIRPNVVTYNSLINCL---CNY-- 306
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFR 214
G ++ + RL S + ++ + +VV++ +I F
Sbjct: 307 ------------------------GRWSDASRLLS---NMLEKKINPNVVTFNALIDAFF 339
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
GK +A E+M + P+ +T + ++ + F+ ++
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRM 330
LI+ + KC RVE+GV +F + ++ N T+ +I+G A + A +F +M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
+ V D +T +L G +D IF +L + + N+ Y M++ + ++G
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL--NIFIYNTMIEGMCKAG 517
Query: 391 SLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE 436
+ EA+++ + P + +++ S+ L+ ++ + RK+ E
Sbjct: 518 KVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 155/397 (39%), Gaps = 58/397 (14%)
Query: 117 SLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPC---HFAQAQSVHAHVLKLGHLHDIYV 173
SLT +F H + I N T P F + C FA A + +L+ L DI
Sbjct: 6 SLTAKRLFVHWNLQGI-GNPPTVPSFFNLCGSGCWERSFASASGDYREILR-NRLSDIIK 63
Query: 174 HNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAG 233
+ + ++ + +V + ++ KF+ + EQMQ G
Sbjct: 64 VDDAVDLFG----------DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 234 VAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGV 293
++ + T + + + + + + G+E D+V ++L++ Y R+ + V
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 294 RVFSSVKE----KNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSAC 349
+ + E + FT+ +I GL L EA+ L ++M Q G + D VT V++
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 350 NHSGLVDMGRQ---------------IFGFLVEG--KY----------------GFIPNV 376
G +D+ IF +++ KY G PNV
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 377 KHYACMVDLLARSGSLREAFEVMRCM---PFDPTKAMWGSLLVSSKSQGDLEFSEFVARK 433
Y +++ L G +A ++ M +P + +L+ + +G L +E + +
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 434 LVE--LEPANSAYYVHLSNLYAEMGRWDDVEKVRGMM 468
+++ ++P Y + L N + R D+ +++ M
Sbjct: 354 MIQRSIDPDTITYNL-LINGFCMHNRLDEAKQMFKFM 389
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 156/370 (42%), Gaps = 35/370 (9%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+ I+N++I + + + M + + P+H + L + C +
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIE---AMEKQGMKPDHLAYNCLIRRF---CELGEM 440
Query: 156 QSVHAHVLKL---GHLHDIYVHNSLLGVYAAS---PRLFSLCRQLFDEMTHRDVVSWTVM 209
++ V K+ G + +N L+G Y + F + +++ D T +VVS+ +
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALA-ACADSGAVEMGAWIHDFIRRNG 268
I K +A + M+ GV+P +V + N L C G +E + + G
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSP-KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAI 324
EL++V LID + G++ E + + K +VFT+N++I G A + + I
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCI 619
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD 384
L+ M++ G++ T ++S C G +++ ++F G+ P++ Y ++
Sbjct: 620 ALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLF-----GEMSLKPDLLVYNGVLH 673
Query: 385 LLARSGSLREAFEVMRCM---PFDPTKAMWGSLLVSSKSQGDL-----EFSEFVARKLVE 436
A G + +AF + + M K + SL++ G L E AR E
Sbjct: 674 CYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR---E 730
Query: 437 LEPANSAYYV 446
+EP Y +
Sbjct: 731 MEPEADTYNI 740
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 19/293 (6%)
Query: 193 QLFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAAC 248
+LF+ M H V + V+I G + +DA F++M + P+ +T +
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 249 ADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE----KNV 304
+G E + + ++ + E ++ L+ K G VE+ V +K+ +
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 305 FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGF 364
FT++ + G + + E A+ ++ GV+ + T +L+A G ++ +I G
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG- 378
Query: 365 LVEGKYGFIPNVKHYACMVDLLARSGSL---REAFEVMRCMPFDPTKAMWGSLLVSSKSQ 421
E G +PN Y M+D R G L R E M P + L+
Sbjct: 379 -REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 422 GDLEFSEFVAR--KLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQ 472
G++E +E KL + P+ Y + L GR + +K ++K+ +
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNI----LIGGYGRKYEFDKCFDILKEME 486
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 5/223 (2%)
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGT 277
K +AL + ++ G + ++ C + A+E +HD I LD
Sbjct: 92 KIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCIT----PLDARSYH 147
Query: 278 ALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
+I+MY+ C ++ + VF+ + ++N TW +I+ LA GE AI +F R ++G +
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D+ AV AC G ++ G F + YG + +++ Y ++++LA G L EA +
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRD-YGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 398 VMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPA 440
+ M +P+ MW +L+ QG LE + A + +L+ +
Sbjct: 267 FVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDAS 309
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 140/321 (43%), Gaps = 17/321 (5%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSL-SAPCHF 152
P P +F+ + A+ H H L IF M R + PN T L L P F
Sbjct: 127 PPPSKALFDIALSAYLHEGKPH---VALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 153 A--QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFS----LCRQLFDEMTHRDVVSW 206
+ A+ V ++K+G ++ N L+ Y +L L R + + + D V++
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 207 TVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRR 266
++ G+ D M+ G+ PNRVT N + G+++ I + +++
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 267 NGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVK----EKNVFTWNAVIKGLALAKSGEE 322
D+ LI+ G + EG+ + ++K + +V T+N +I G E
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 323 AIRLFNRMEQDGVRADEVT-LLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYAC 381
A +L +ME DGV+A++VT +++ C + R++ + +GF P++ Y
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV--DMHGFSPDIVTYHT 421
Query: 382 MVDLLARSGSLREAFEVMRCM 402
++ + G L A E+MR M
Sbjct: 422 LIKAYLKVGDLSGALEMMREM 442
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 202 DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIH 261
D V++ +IMGF K + AL +++M+ + P T + + G E+
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 262 DFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS-SVK---EKNVFTWNAVIKGLALA 317
D + +G D ++I Y K GRVE+ ++ S+K + + +T N ++ GL
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 318 KSGEEAIRLFNRMEQDGVRADEVTLLAVLSA-CNHSGLVDMGRQIFGFLVE-GKYGFIPN 375
E+A+ FN + ++ D VT ++SA C L ++ + L E + G P+
Sbjct: 605 GMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKL----KEAYDLLSEMEEKGLEPD 659
Query: 376 VKHYACMVDLLARSGSLREAFEVMR 400
Y + LL G L E E+++
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLK 684
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 138/344 (40%), Gaps = 22/344 (6%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLS-IFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
P +N++++A S L+ L + M +N ++PN T+ L +
Sbjct: 238 PDNVTYNTILKAMSKKGR----LSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLL-GVYAASPRLFSLCRQLFDEMT----HRDVVSWTVM 209
A + + + L D+ +N L+ G+ A L +L D M DVV++ +
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGL--ELMDAMKSLKLQPDVVTYNTL 351
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALA-ACADSGAVEMGAWIHDFIRRNG 268
I G G +A EQM+ GV N+VT +L C + + + + + +G
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAI 324
+ D+V LI Y K G + + + + +K N T N ++ L + +EA
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVD 384
L N + G DEVT ++ V+ +++ + K P V + ++
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM--KKVKITPTVSTFNSLIG 529
Query: 385 LLARSGSLR---EAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
L G E F+ + P + + S+++ +G +E
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE 573
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 166/400 (41%), Gaps = 26/400 (6%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P V FN L A + + + L++ M I + YT + +
Sbjct: 84 PLPTVIDFNRLFSAIAKTKQYE---LVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLS 140
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFD---EMTHR-DVVSWTVM 209
A S ++KLG+ D + N+LL R+ S +L D EM H+ +++ +
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV-SEALELVDRMVEMGHKPTLITLNTL 199
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
+ G GK DA++ ++M G PN VT L SG + + +
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIR 325
+LD V + +ID K G ++ +F+ ++ K ++ T+N +I G A ++ +
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 326 LFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
L M + + + VT ++ + G + Q+ +++ G PN Y ++D
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ--RGIAPNTITYNSLIDG 377
Query: 386 LARSGSLREAFEVMRCM---PFDPTKAMWGSLL----VSSKSQGDLE-FSEFVARKLVEL 437
+ L EA +++ M DP + L+ +++ LE F E R ++
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI-- 435
Query: 438 EPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDL 477
AN+ Y L + + G+ + +K+ M R++ D+
Sbjct: 436 --ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 143/326 (43%), Gaps = 12/326 (3%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
+ + M I + + + L A ++ + G DI +N+L+G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 181 YAASPRL---FSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
+ + R L R + +VV+++V+I F GK +A ++M G+APN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS 297
+T + + +E + D + G + D++ LI+ Y K R+++G+ +F
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 298 SVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSG 353
+ + N T+N +++G + E A +LF M VR D V+ +L +G
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 354 LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTK--AMW 411
++ +IFG + + K ++ Y ++ + + + +A+++ +P K A
Sbjct: 488 ELEKALEIFGKIEKSKMEL--DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 412 GSLLVSSKSQGD-LEFSEFVARKLVE 436
++++S + D L ++ + RK+ E
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTE 571
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 154/356 (43%), Gaps = 23/356 (6%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
+ +F M ++ LP F LF +++ + ++ + G H IY + ++
Sbjct: 73 VDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINC 132
Query: 181 YAASPRL---FSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
+ +L FS ++ D V + ++ G + +AL ++M G P
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS 297
+T+ + +G V + D + G++ + V ++++ K G+ + +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 298 SVKEKNV----FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSG 353
++E+N+ ++ +I GL S + A LFN ME G +AD +T ++ ++G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 354 LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCM---PFDPTKAM 410
D G ++ +++ K PNV ++ ++D + G LREA ++++ M P
Sbjct: 313 RWDDGAKLLRDMIKRKIS--PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 411 WGSLLVSSKSQGDLEFSEFVARKLVEL------EPANSAYYVHLSNLYAEMGRWDD 460
+ SL+ + LE A ++V+L +P + + L N Y + R DD
Sbjct: 371 YNSLIDGFCKENRLE----EAIQMVDLMISKGCDPDIMTFNI-LINGYCKANRIDD 421
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 155/367 (42%), Gaps = 47/367 (12%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+VF +N LIR F + N L++F M LPN T+ L + C
Sbjct: 203 PNVFTYNILIRGFCFA---GNIDVALTLFDKMETKGCLPNVVTYNTL---IDGYC----- 251
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFS-------LCRQ--------LFDEMTH 200
KL + D + + + P L S LCR+ + EM
Sbjct: 252 --------KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 201 R----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEM 256
R D V++ +I G+ G F AL+ +M G+ P+ +T + + + +G +
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 257 GAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIK 312
D +R G + T L+D +++ G + E RV + + +V T+NA+I
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 313 GLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGF 372
G + E+AI + M++ G+ D V+ VLS S VD ++ +VE G
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK--GI 481
Query: 373 IPNVKHYACMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEF 429
P+ Y+ ++ +EA +E M + P + + +L+ + +GDLE +
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 430 VARKLVE 436
+ ++VE
Sbjct: 542 LHNEMVE 548
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 159/359 (44%), Gaps = 28/359 (7%)
Query: 132 ILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLC 191
++ ++ + K+LS H AQA G + + +N++L S R S
Sbjct: 140 VVKSYSRLSLIDKALSI-VHLAQAH---------GFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 192 RQLFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAA 247
+F EM +V ++ ++I GF AG D AL F++M+ G PN VT +
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 248 CADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----N 303
++ G + + G E +++ +I+ + GR++E V + + + +
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 304 VFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFG 363
T+N +IKG + +A+ + M + G+ +T +++ + +G +M R +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG--NMNRAM-E 366
Query: 364 FLVEGKY-GFIPNVKHYACMVDLLARSGSLREAFEVMRCMP---FDPTKAMWGSLLVSSK 419
FL + + G PN + Y +VD ++ G + EA+ V+R M F P+ + +L+
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 420 SQGDLEFSEFVARKLVE--LEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKD 476
G +E + V + E L P +Y LS + D+ +V+ M ++ + D
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG-FCRSYDVDEALRVKREMVEKGIKPD 484
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P V + SLI + + + + ++ L M + PN T+ L S + +A
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLD---QMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMIMG 212
V + G + +N+L+ + + ++ ++ + ++ DVVS++ ++ G
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
F + D+AL +M G+ P+ +T + + + + +++ + R G D
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFN 328
TALI+ Y G +E+ +++ + + EK +V T++ +I GL EA RL
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKY-------------GFIPN 375
++ + +VT ++ C++ + I GF ++G P+
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 376 VKHYACMVDLLARSGSLREAFEVMRCM 402
Y M+ R+G +R+A+ + + M
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEM 666
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 130/313 (41%), Gaps = 14/313 (4%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + +++ F + ++ + P+ + + ++
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+A+ V + ++ G +NSL+ + + + Q+ DVVS+ ++I +
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 331
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
A + ++AL FE+M AGV P L A A SG VE + +RR+ D+
Sbjct: 332 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 391
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVK----EKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
T ++ Y +E + F +K E N+ T+ +IKG A A E+ + ++ +
Sbjct: 392 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 451
Query: 330 MEQDGVRADEVTLLAVLSA---CNHSGLVDMGRQIFGFLVEGKY-GFIPNVKHYACMVDL 385
M G++A++ L ++ A C + G G+ E + G P+ K ++ L
Sbjct: 452 MRLSGIKANQTILTTIMDASGRCKNFG------SALGWYKEMESCGVPPDQKAKNVLLSL 505
Query: 386 LARSGSLREAFEV 398
+ L EA E+
Sbjct: 506 ASTQDELEEAKEL 518
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 141/298 (47%), Gaps = 22/298 (7%)
Query: 178 LGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
LG + + R+ S+ ++ + +V+S+T ++ + GK ++A F +MQ +G P+
Sbjct: 159 LGNFNGAERVLSVLSKM---GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPS 215
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFI---RRNGWELDVVLGTALIDMYAKCGRVEEGVR 294
+T L + + + + + +++ + D + +I MY K G E+ +
Sbjct: 216 AITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARK 275
Query: 295 VFSSVKEKNV----FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACN 350
VFSS+ K V T+N++ ++ S +E +++++M++ ++ D V+ ++ A
Sbjct: 276 VFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYG 332
Query: 351 HSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFD---PT 407
+ + +F +++ G P K Y ++D A SG + +A V + M D P
Sbjct: 333 RARREEEALSVFEEMLDA--GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 390
Query: 408 KAMWGSLLVSSKSQGDLEFSE-FVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKV 464
+ ++L + + D+E +E F R V+ N Y L YA + +DVEK+
Sbjct: 391 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA---KANDVEKM 445
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 120/245 (48%), Gaps = 11/245 (4%)
Query: 166 GHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT----HRDVVSWTVMIMGFRNAGKFDD 221
G HD + + +++G + + F +L DEM + V++ +I + A ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRA-KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 222 ALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALID 281
A+ F QMQ AG P+RVT + A +G +++ ++ ++ G D + +I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 282 MYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
K G + ++F + ++ N+ T+N ++ A A++ + A++L+ M+ G
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D+VT V+ H G ++ +F + + + IP+ Y +VDL ++G++ +A++
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW--IPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 398 VMRCM 402
+ M
Sbjct: 596 WYQAM 600
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 114/272 (41%), Gaps = 11/272 (4%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P+ +N LI ++ +++ + ++ ++F M P+ T+ L +
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAM---NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 155 AQSVHAHVLKLGHLHDIYVHNSL---LGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
A ++ + G D + ++ + LG P L ++ D+ ++V++ +M+
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
A + +AL + MQ AG P++VT + G +E + +++ W
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSV----KEKNVFTWNAVIKGLALAKSGEEAIRLF 327
D + L+D++ K G VE+ + + ++ NV T N+++ EA L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 328 NRMEQDGVRADEVTLLAVLSACNHS-GLVDMG 358
M G+R T +LS C +DMG
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 120/245 (48%), Gaps = 11/245 (4%)
Query: 166 GHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT----HRDVVSWTVMIMGFRNAGKFDD 221
G HD + + +++G + + F +L DEM + V++ +I + A ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRA-KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 222 ALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALID 281
A+ F QMQ AG P+RVT + A +G +++ ++ ++ G D + +I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 282 MYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
K G + ++F + ++ N+ T+N ++ A A++ + A++L+ M+ G
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D+VT V+ H G ++ +F + + + IP+ Y +VDL ++G++ +A++
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW--IPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 398 VMRCM 402
+ M
Sbjct: 596 WYQAM 600
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 114/272 (41%), Gaps = 11/272 (4%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P+ +N LI ++ +++ + ++ ++F M P+ T+ L +
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAM---NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 155 AQSVHAHVLKLGHLHDIYVHNSL---LGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
A ++ + G D + ++ + LG P L ++ D+ ++V++ +M+
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
A + +AL + MQ AG P++VT + G +E + +++ W
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSV----KEKNVFTWNAVIKGLALAKSGEEAIRLF 327
D + L+D++ K G VE+ + + ++ NV T N+++ EA L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 328 NRMEQDGVRADEVTLLAVLSACNHS-GLVDMG 358
M G+R T +LS C +DMG
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 130/313 (41%), Gaps = 14/313 (4%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + +++ F + ++ + P+ + + ++
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGF 213
+A+ V + ++ G +NSL+ + + + Q+ DVVS+ ++I +
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 324
Query: 214 RNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDV 273
A + ++AL FE+M AGV P L A A SG VE + +RR+ D+
Sbjct: 325 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 384
Query: 274 VLGTALIDMYAKCGRVEEGVRVFSSVK----EKNVFTWNAVIKGLALAKSGEEAIRLFNR 329
T ++ Y +E + F +K E N+ T+ +IKG A A E+ + ++ +
Sbjct: 385 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 444
Query: 330 MEQDGVRADEVTLLAVLSA---CNHSGLVDMGRQIFGFLVEGKY-GFIPNVKHYACMVDL 385
M G++A++ L ++ A C + G G+ E + G P+ K ++ L
Sbjct: 445 MRLSGIKANQTILTTIMDASGRCKNFG------SALGWYKEMESCGVPPDQKAKNVLLSL 498
Query: 386 LARSGSLREAFEV 398
+ L EA E+
Sbjct: 499 ASTQDELEEAKEL 511
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 141/298 (47%), Gaps = 22/298 (7%)
Query: 178 LGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
LG + + R+ S+ ++ + +V+S+T ++ + GK ++A F +MQ +G P+
Sbjct: 152 LGNFNGAERVLSVLSKM---GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPS 208
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFI---RRNGWELDVVLGTALIDMYAKCGRVEEGVR 294
+T L + + + + + +++ + D + +I MY K G E+ +
Sbjct: 209 AITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARK 268
Query: 295 VFSSVKEKNV----FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACN 350
VFSS+ K V T+N++ ++ S +E +++++M++ ++ D V+ ++ A
Sbjct: 269 VFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYG 325
Query: 351 HSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFD---PT 407
+ + +F +++ G P K Y ++D A SG + +A V + M D P
Sbjct: 326 RARREEEALSVFEEMLDA--GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 383
Query: 408 KAMWGSLLVSSKSQGDLEFSE-FVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKV 464
+ ++L + + D+E +E F R V+ N Y L YA + +DVEK+
Sbjct: 384 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA---KANDVEKM 438
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 120/245 (48%), Gaps = 11/245 (4%)
Query: 166 GHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT----HRDVVSWTVMIMGFRNAGKFDD 221
G HD + + +++G + + F +L DEM + V++ +I + A ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRA-KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 222 ALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALID 281
A+ F QMQ AG P+RVT + A +G +++ ++ ++ G D + +I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 282 MYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
K G + ++F + ++ N+ T+N ++ A A++ + A++L+ M+ G
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D+VT V+ H G ++ +F + + + IP+ Y +VDL ++G++ +A++
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW--IPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 398 VMRCM 402
+ M
Sbjct: 596 WYQAM 600
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 114/272 (41%), Gaps = 11/272 (4%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P+ +N LI ++ +++ + ++ ++F M P+ T+ L +
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAM---NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 155 AQSVHAHVLKLGHLHDIYVHNSL---LGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIM 211
A ++ + G D + ++ + LG P L ++ D+ ++V++ +M+
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
A + +AL + MQ AG P++VT + G +E + +++ W
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSV----KEKNVFTWNAVIKGLALAKSGEEAIRLF 327
D + L+D++ K G VE+ + + ++ NV T N+++ EA L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 328 NRMEQDGVRADEVTLLAVLSACNHS-GLVDMG 358
M G+R T +LS C +DMG
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 136/367 (37%), Gaps = 51/367 (13%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P +F +NSLI S + + S M N + PN +T+ FA A
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEAR---SFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLC------------------------ 191
+ + G L + + L+ Y ++ C
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 192 ----------RQLFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
++F EM + DV S+ V+I GF G A F++M G+ PN
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS 297
+ L SG +E + D + G + V +ID Y K G + E R+F
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 298 SVKEKNV----FTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSG 353
+K K + F + ++ G E AI +F + G + A+++ G
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFG 780
Query: 354 LVDMGRQIFGFLVEGKYGFI--PNVKHYACMVDLLARSGSL---REAFEVMRCMPFDPTK 408
++ ++ L++G + PN Y M+D L + G+L +E F M+ PT
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 409 AMWGSLL 415
+ SLL
Sbjct: 841 ITYTSLL 847
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 146/353 (41%), Gaps = 33/353 (9%)
Query: 123 IFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYA 182
IF M I P+ +++ L S + +A S+ +++ G ++ ++N LLG +
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 183 ASPRLFSLCRQLFDEMT----HRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR 238
S + ++L DEM+ H + V++ +I G+ +G +A F++M+ G+ P+
Sbjct: 674 RSGEI-EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 239 VTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRV--- 295
+ C VE I + G ALI+ K G+ E V
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 296 -----FSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACN 350
F + N T+N +I L + E A LF++M+ + +T ++L
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL---- 847
Query: 351 HSGLVDMGR--QIFGFLVEG-KYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPT 407
+G MGR ++F E G P+ Y+ +++ + G +A ++ M F
Sbjct: 848 -NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM-FAKN 905
Query: 408 KAMWG---------SLLVSSKSQGDLEFSEFVARKLVELE-PANSAYYVHLSN 450
G +LL G++E +E V +V L+ +SA + L N
Sbjct: 906 AVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 159/407 (39%), Gaps = 57/407 (14%)
Query: 122 SIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVY 181
++F M + ++P + L + + Q + + K + Y + +++
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Query: 182 AASPRL---FSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN- 237
+S L +++ +++ +VV +T +I F +F DA+ ++M+ G+AP+
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 238 -------------------RVTMVNALAACADSGAVEMGAWIHDFI-------------- 264
R +V + A GA+I +I
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 265 -RRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVF----TWNAVIKGLALAKS 319
R G + VL T LI+ Y K G+V E + S+ ++ + T+ ++ GL
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 320 GEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHY 379
++A +F M G+ D + +++ + G + IF +VE G PNV Y
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE--EGLTPNVIIY 665
Query: 380 ACMVDLLARSGSLREAFEVMRCMPFD---PTKAMWGSLLVSSKSQGDL--EFSEFVARKL 434
++ RSG + +A E++ M P + +++ GDL F F KL
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 435 VELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDLGCSS 481
L P + Y + L R +DVE+ + T GC+S
Sbjct: 726 KGLVPDSFVY----TTLVDGCCRLNDVERAITIFG----TNKKGCAS 764
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 166 GHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIMGFRNAGKFDD 221
G HD + + +++G + + F +L DEM + V++ +I + A +
Sbjct: 354 GFKHDGHTYTTMVGNLGRA-KQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKE 412
Query: 222 ALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALID 281
A+ F QMQ AG P+RVT + A +G +++ ++ ++ G D + +I+
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 282 MYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRA 337
K G + R+F + + N+ T+N +I A A++ E A++L+ M+ G +
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 338 DEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFE 397
D+VT V+ H G ++ +F + + ++P+ Y +VDL ++G++ +A++
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQ--RKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 398 VMRCM 402
+ M
Sbjct: 591 WYQAM 595
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 116/273 (42%), Gaps = 13/273 (4%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P+ +N LI ++ +++ ++ ++F M P+ T+ L +
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAM---NVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDI 447
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMI 210
A ++ + + G D + ++ ++ + L + R LF EM + ++V++ +MI
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHR-LFCEMVGQGCTPNLVTFNIMI 506
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
A ++ AL + MQ AG P++VT + G +E + ++R W
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKE----KNVFTWNAVIKGLALAKSGEEAIRL 326
D + L+D++ K G V++ + + ++ + NV T N+++ EA L
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNL 626
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHS-GLVDMG 358
M G+ T +LS C + DMG
Sbjct: 627 LQSMLALGLHPSLQTYTLLLSCCTDARSNFDMG 659
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 174/432 (40%), Gaps = 55/432 (12%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P++ +SL+ + HS ++ ++ M PN TF L L ++A
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAV---ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 156 QSVHAHVLKLGHLHDIYVHNSL---LGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMG 212
++ ++ G D+ + + L + F+L ++ V+ + +I G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGA-VEMGAWIHDFIRRNGWEL 271
DDAL F++M+ G+ PN VT + ++ + G + + D I R
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INP 324
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----------------------------- 302
DV +ALID + K G++ E +++ + ++
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 303 ----------NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHS 352
+V T+N +IKG K EE + +F M Q G+ + VT ++ +
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 353 GLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREA---FEVMRCMPFDPTKA 409
G DM ++IF +V G PN+ Y ++D L ++G L +A FE ++ +PT
Sbjct: 445 GDCDMAQEIFKEMVSD--GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 410 MWGSLLVSSKSQGDLE--FSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGM 467
+ ++ G +E + F L ++P AY +S + G ++ + +
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG-FCRKGSKEEADALFKE 561
Query: 468 MKDRQLTKDLGC 479
MK+ + GC
Sbjct: 562 MKEDGTLPNSGC 573
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 44/329 (13%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + F+ L+ A + + +S+ M I NHYT+ L
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFD---VVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 133
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMI 210
A +V ++KLG+ +I +SLL Y S R+ +L Q+F + V++ +I
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
G K +A+ ++M G P+ VT G ++ +R
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVT---------------YGVVVNGLCKRG--- 235
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
D L L++ + G++E GV + +N +I GL K ++A+ LF M
Sbjct: 236 -DTDLAFNLLNKMEQ-GKLEPGVLI-----------YNTIIDGLCKYKHMDDALNLFKEM 282
Query: 331 EQDGVRADEVTLLAVLSA-CNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
E G+R + VT +++S CN+ D R + ++E K P+V ++ ++D +
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASR-LLSDMIERKIN--PDVFTFSALIDAFVKE 339
Query: 390 GSLREA---FEVMRCMPFDPTKAMWGSLL 415
G L EA ++ M DP+ + SL+
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 41/292 (14%)
Query: 194 LFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACA 249
LF EM ++ ++ ++ KFD + EQMQ G+ N T +
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127
Query: 250 DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGV----RVFSSVKEKNVF 305
+ + + + + G+E ++V ++L++ Y R+ E V ++F + + N
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 306 TWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFL 365
T+N +I GL L EA+ L +RM G + D VT V++ G D+ + +
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 366 VEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFDPTKAMWGSLLVSSKSQGDLE 425
+GK P V Y ++D L + + +A + + M +++G
Sbjct: 248 EQGK--LEPGVLIYNTIIDGLCKYKHMDDALNLFKEM----------------ETKG--- 286
Query: 426 FSEFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDL 477
+ P N Y L + GRW D ++ M +R++ D+
Sbjct: 287 -----------IRP-NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 162/387 (41%), Gaps = 54/387 (13%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P V +NS++ S ++ L + M + + +T+ + SL
Sbjct: 190 QPDVVTYNSIVNGICRSG---DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLL-GVYAASPRLFSLCRQLFDEMTHRDVV----SWTVM 209
A S+ + G + +NSL+ G+ A ++ L +M R++V ++ V+
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGK--WNDGALLLKDMVSREIVPNVITFNVL 304
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGW 269
+ F GK +A +++M G++PN +T + + + D + RN
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 270 ELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIR 325
D+V T+LI Y RV++G++VF ++ ++ N T++ +++G + + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 326 LFNRMEQDGVRADEVTLLAVLSA-CNHSGL--------------VDMGRQIFGFLVEGK- 369
LF M GV D +T +L C++ L +D+G ++ ++EG
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 370 -----------------YGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFD---PTKA 409
G PNV Y M+ L + GSL EA ++R M D P
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 410 MWGSLLVSSKSQGDLEFSEFVARKLVE 436
+ +L+ + GDL S KL+E
Sbjct: 545 TYNTLIRAHLRDGDLTASA----KLIE 567
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 148/378 (39%), Gaps = 52/378 (13%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + F+ A + + + L + N I N YT + C
Sbjct: 84 PLPSLVDFSRFFSAIARTKQFN---LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTC 140
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLL-GVY------------------AASPRLFS----- 189
A SV V+KLG+ D N+L+ G++ P + +
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIV 200
Query: 190 --LCR--------QLFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVA 235
+CR L +M R DV +++ +I G D A+ F++M+ G+
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260
Query: 236 PNRVTMVNALAACADSGAVEMGA-WIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVR 294
+ VT + + +G GA + D + R +V+ L+D++ K G+++E
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKEGKLQEANE 319
Query: 295 VFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACN 350
++ + + N+ T+N ++ G + EA + + M ++ D VT +++
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 351 HSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLR---EAFEVMRCMPFDPT 407
VD G ++F + K G + N Y+ +V +SG ++ E F+ M P
Sbjct: 380 MVKRVDDGMKVFRNI--SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 408 KAMWGSLLVSSKSQGDLE 425
+G LL G LE
Sbjct: 438 VMTYGILLDGLCDNGKLE 455
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 144/335 (42%), Gaps = 33/335 (9%)
Query: 158 VHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSWTVMIMGFRNAG 217
+ H+LK G L LL ++ FS C + F +++ +V + G +
Sbjct: 17 IQPHLLKTGSLR-----TDLLCTISS---FFSSCERDFSSISNGNVCFRERLRSGIVDIK 68
Query: 218 KFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRR---NGWELDVV 274
K DDA+ F++M + P+ V +A A + + + DF ++ NG ++
Sbjct: 69 K-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNL---VLDFCKQLELNGIAHNIY 124
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVK----EKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
+I+ + +C + V V E + T+N +IKGL L EA+ L +RM
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSG 390
++G + D VT ++++ SG + + + E +V Y+ ++D L R G
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK--ADVFTYSTIIDSLCRDG 242
Query: 391 SLREAFEVMRCMPFDPTKA---MWGSLL-----VSSKSQGDLEFSEFVARKLVELEPANS 442
+ A + + M K+ + SL+ + G L + V+R++V N
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV----PNV 298
Query: 443 AYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKDL 477
+ L +++ + G+ + ++ M R ++ ++
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 132/311 (42%), Gaps = 12/311 (3%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P V +N L+ ++ L+ M + PN T + +S+ + + A
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLN---DMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASP---RLFSLCRQLFDEMTHRDVVSWTVMIMG 212
+ + A +L+ G + N L+ R + ++ + +S+ ++ G
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 213 FRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELD 272
F K D A+ E+M G P+ VT L A G VE I + + G
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 273 VVLGTALIDMYAKCGRVEEGVRVFSSVKEKNV----FTWNAVIKGLALAKSGEEAIRLFN 328
++ +ID AK G+ + +++ ++ K++ T+++++ GL+ +EAI+ F+
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 329 RMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLAR 388
E+ G+R + VT +++ S D F++ G PN Y +++ LA
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI--NRGCKPNETSYTILIEGLAY 566
Query: 389 SGSLREAFEVM 399
G +EA E++
Sbjct: 567 EGMAKEALELL 577
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 110/267 (41%), Gaps = 10/267 (3%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
+P+V N ++R+ + ++ + A M R P+ TF L L +
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAE---KLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMIM 211
A + + + G + +N LL + ++ ++ + D+V++ M+
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
GK +DA+ Q+ G +P +T + A +G + D +R +
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVK----EKNVFTWNAVIKGLALAKSGEEAIRLF 327
D + ++L+ ++ G+V+E ++ F + N T+N+++ GL ++ + AI
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGL 354
M G + +E + ++ + G+
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGM 569
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 17/196 (8%)
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
G+ ++ E M Y G P+ + + G A I + + +G DV+
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVK-EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDG 334
+I Y K G + + V + +V T+N +++ L + ++A+ + +RM Q
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 335 VRADEVTLLAVLSA-CNHSG------LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA 387
D +T ++ A C SG L+D R G P+V Y +V+ +
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRD---------RGCTPDVVTYNVLVNGIC 285
Query: 388 RSGSLREAFEVMRCMP 403
+ G L EA + + MP
Sbjct: 286 KEGRLDEAIKFLNDMP 301
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 138/341 (40%), Gaps = 19/341 (5%)
Query: 150 CHFAQAQSVHAHVLKL----GHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVS 205
C + + A +L++ G + D+ +N ++ Y + + + L DVV+
Sbjct: 148 CRLGKTRKA-AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVT 206
Query: 206 WTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNAL-AACADSGAVEMGAWIHDFI 264
+ ++ ++GK A+ ++M P+ +T + A C DSG V + D +
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG-VGHAMKLLDEM 265
Query: 265 RRNGWELDVVLGTALIDMYAKCGRVEEGVRVF----SSVKEKNVFTWNAVIKGLALAKSG 320
R G DVV L++ K GR++E ++ SS + NV T N +++ +
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 321 EEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA 380
+A +L M + G VT +++ GL +GR I ++G PN Y
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL--LGRAIDILEKMPQHGCQPNSLSYN 383
Query: 381 CMVDLLARSGSLREAFEVMRCMPFD---PTKAMWGSLLVSSKSQGDLEFSEFVARKLVE- 436
++ + + A E + M P + ++L + G +E + + +L
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 437 -LEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKD 476
P Y + L A+ G+ K+ M+ + L D
Sbjct: 444 GCSPVLITYNTVIDGL-AKAGKTGKAIKLLDEMRAKDLKPD 483
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 165/387 (42%), Gaps = 34/387 (8%)
Query: 94 PRPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFA 153
P P + F L+ + + + +S+F M I P T + +
Sbjct: 79 PLPSIIDFTRLLSVIAKMNRYD---VVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPC 135
Query: 154 QAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRL---FSLCRQLFDEMTHRDVVSWTVMI 210
+A ++KLG D+ SLL Y R+ +L Q+ +VV++T +I
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAW------IHDFI 264
+ A+ F QM G PN VT NAL +G E+G W + D +
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRPNVVT-YNALV----TGLCEIGRWGDAAWLLRDMM 250
Query: 265 RRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE----KNVFTWNAVIKGLALAKSG 320
+R E +V+ TALID + K G++ E +++ + + +VFT+ ++I GL +
Sbjct: 251 KRR-IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 321 EEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA 380
+EA ++F ME++G +EV ++ S V+ G +IF + + G + N Y
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM--SQKGVVANTITYT 367
Query: 381 CMVD---LLARSGSLREAFEVMRCMPFDPTKAMWGSLL----VSSKSQGDLEFSEFVARK 433
++ L+ R +E F M P + LL + K + L E++ ++
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 434 LVELEPANSAYYVHLSNLYAEMGRWDD 460
+++ N Y + ++G+ +D
Sbjct: 428 EMDI---NIVTYTIIIQGMCKLGKVED 451
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 12/252 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+V F +LI AF + ++ M ++ P+ +T+ L L +A
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQM---SVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVV----SWTVMIM 211
+ + + + G + ++ +L+ + S R+ ++F EM+ + VV ++TV+I
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED-GMKIFYEMSQKGVVANTITYTVLIQ 371
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G+ G+ D A F QM P+ T L +G VE I +++R+ ++
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
++V T +I K G+VE+ +F S+ K NV T+ +I G EA LF
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Query: 328 NRMEQDGVRADE 339
+M++DG +E
Sbjct: 492 KKMKEDGFLPNE 503
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 126/293 (43%), Gaps = 14/293 (4%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP+V +N+L+ ++ + M + I PN TF L + +
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAW---LLRDMMKRRIEPNVITFTALIDAFVKVGKLME 276
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEM----THRDVVSWTVMI 210
A+ ++ ++++ D++ + SL+ L RQ+F M + + V +T +I
Sbjct: 277 AKELYNVMIQMSVYPDVFTYGSLINGLCMYG-LLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
GF + + +D + F +M GV N +T + G ++ + + +
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRL 326
D+ L+D G+VE+ + +F ++++ N+ T+ +I+G+ E+A L
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHY 379
F + G++ + +T ++S GL+ +F + E GF+PN Y
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED--GFLPNESVY 506
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 169/429 (39%), Gaps = 91/429 (21%)
Query: 101 FNSLIRAFS-HSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVH 159
F S+++ F HSH H ++ A + SL C + +A S +
Sbjct: 9 FASIVKGFHLHSHRHRLQISNPRTAASL-----------------SLCGFCFWIRAFSSY 51
Query: 160 AHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIMGFRN 215
+L+ G LH++ +++L LF M H ++ +T ++
Sbjct: 52 RKILRNG-LHNLQFNDAL---------------DLFTRMVHSRPLPSIIDFTRLLSVIAK 95
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNAL-AACADSGAVEMGAWIHDFIRRNGWELDVV 274
++D + FEQMQ G+ P T + C S ++ ++ G+E D+V
Sbjct: 96 MNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKL-GFEPDLV 154
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVK----EKNVFTWNAVIKGLALAKSGEEAIRLFNRM 330
T+L++ Y R+E+ + +F + + NV T+ +I+ L + A+ LFN+M
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 331 EQDGVRADEVTLLAVLSACNHSGLVDMGR-QIFGFLVEG--KYGFIPNVKHYACMVDLLA 387
+G R + VT A+++ GL ++GR +L+ K PNV + ++D
Sbjct: 215 GTNGSRPNVVTYNALVT-----GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 388 RSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSE---------------- 428
+ G L EA + VM M P +GSL+ G L+ +
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 429 --------FVARKLVELE------------PANSAYYVHLSNLYAEMGRWDDVEKVRGMM 468
F K VE AN+ Y L Y +GR D ++V M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 469 KDRQLTKDL 477
R+ D+
Sbjct: 390 SSRRAPPDI 398
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 129/280 (46%), Gaps = 12/280 (4%)
Query: 203 VVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHD 262
V++ ++ F AG + +AL ++M+ + VT +AA +G + A + +
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
Query: 263 FIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE----KNVFTWNAVIKGLALAK 318
+ + G + + T +ID Y K G+ +E +++F S+KE N T+NAV+ L
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS 435
Query: 319 SGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKH 378
E I++ M+ +G + T +L+ C + G+ ++F + GF P+
Sbjct: 436 RSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM--KSCGFEPDRDT 493
Query: 379 YACMVDLLARSGSLREAFEV---MRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLV 435
+ ++ R GS +A ++ M F+ + +LL + +GD E V +
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 436 E--LEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQL 473
+P ++Y + L YA+ G + +E++ +K+ Q+
Sbjct: 554 SKGFKPTETSYSLML-QCYAKGGNYLGIERIENRIKEGQI 592
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 130/299 (43%), Gaps = 42/299 (14%)
Query: 197 EMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEM 256
E+ D+VS ++ G ++G ++ A+ FE + V N+ A D +E+
Sbjct: 133 ELLRTDLVS---LVKGLDDSGHWERAVFLFEWL---------VLSSNSGALKLDHQVIEI 180
Query: 257 -------------GAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE-- 301
A + D I + LDV T ++ Y++ G+ E+ + +F +KE
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 302 --KNVFTWNAVIKGLA-LAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMG 358
+ T+N ++ + +S + + + + M G++ DE T VLSAC GL+
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA 300
Query: 359 RQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFD--PTKAMWGSLLV 416
++ F L G+ P Y ++ + ++G EA V++ M + P ++ + LV
Sbjct: 301 KEFFAEL--KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELV 358
Query: 417 SSKSQGDLEFS-----EFVARKLVELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKD 470
++ + E + +K V N+ Y + + Y + G+ D+ K+ MK+
Sbjct: 359 AAYVRAGFSKEAAGVIEMMTKKGVM---PNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 127/320 (39%), Gaps = 15/320 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P FN+LI A+ ++ ++ M R T+ L +L+ +
Sbjct: 489 PDRDTFNTLISAYGRCGSEVDAS---KMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVSW----TVMIM 211
++V + + G ++ +L YA + R + SW T+++
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
F+ + AF + G P+ V + L+ + + I + IR +G
Sbjct: 606 NFK-CRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 272 DVVLGTALIDMYAK---CGRVEEGVRVFSSVKEK-NVFTWNAVIKGLALAKSGEEAIRLF 327
D+V +L+DMY + C + EE ++ + K ++ ++N VIKG +EA+R+
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Query: 328 NRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLA 387
+ M + G+R T +S G+ + + K PN + +VD
Sbjct: 725 SEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECM--AKNDCRPNELTFKMVVDGYC 782
Query: 388 RSGSLREAFE-VMRCMPFDP 406
R+G EA + V + FDP
Sbjct: 783 RAGKYSEAMDFVSKIKTFDP 802
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 113/278 (40%), Gaps = 15/278 (5%)
Query: 124 FAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAA 183
FA + P T+ L + + +A SV + + D +N L+ Y
Sbjct: 304 FAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363
Query: 184 SPRLFSL-CRQLFDEMTHRDV----VSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPNR 238
+ FS + + MT + V +++T +I + AGK D+AL F M+ AG PN
Sbjct: 364 AG--FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNT 421
Query: 239 VTMVNALAACA-DSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS 297
T L+ S + EM + D ++ NG + ++ + G + RVF
Sbjct: 422 CTYNAVLSLLGKKSRSNEMIKMLCD-MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR 480
Query: 298 SVK----EKNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSG 353
+K E + T+N +I S +A +++ M + G A T A+L+A G
Sbjct: 481 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Query: 354 LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
G + + GF P Y+ M+ A+ G+
Sbjct: 541 DWRSGENVISDM--KSKGFKPTETSYSLMLQCYAKGGN 576
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/384 (19%), Positives = 151/384 (39%), Gaps = 24/384 (6%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+ + ++I A+ + +L +F M +PN T+ + L +
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEAL---KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM 440
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT----HRDVVSWTVMIM 211
+ + G + N++L + + + ++F EM D ++ +I
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLAL-CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLIS 499
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
+ G DA + +M AG T L A A G G + ++ G++
Sbjct: 500 AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNVFTWNAVIKGLALAK------SGEEAIR 325
+ ++ YAK G R+ + +KE +F +++ L LA +G E R
Sbjct: 560 TETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSE--R 617
Query: 326 LFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDL 385
F ++ G + D V ++LS + + D I + E G P++ Y ++D+
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRED--GLSPDLVTYNSLMDM 675
Query: 386 LARSGSLREAFEVMRCMP---FDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE--LEPA 440
R G +A E+++ + P + +++ +G ++ + + ++ E + P
Sbjct: 676 YVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPC 735
Query: 441 NSAYYVHLSNLYAEMGRWDDVEKV 464
Y +S Y MG + ++E V
Sbjct: 736 IFTYNTFVSG-YTAMGMFAEIEDV 758
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 35/367 (9%)
Query: 137 YTFPFLFKSLS-APC---HFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPR-----L 187
Y P +F SL A C + A + ++K GH+ V+N L+G L
Sbjct: 369 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 188 FSLCRQLFDEMTHRDVVSWTVMIMGFR----NAGKFDDALLAFEQMQYAGVAPNRVTMVN 243
L + + EM VV + + F +AGK++ A +M G P+ T
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 244 ALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKE-- 301
L ++ +E+ + + ++R G DV T ++D + K G +E+ + F+ ++E
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 302 --KNVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGR 359
NV T+ A+I AK A LF M +G + VT A++ +G V+
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 360 QIFGFLVEGK--------------YGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPF- 404
QIF + K PNV Y ++D +S + EA +++ M
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 405 --DPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELE-PANSAYYVHLSNLYAEMGRWDDV 461
+P + ++ +L+ G L+ ++ V ++ E PA Y L + Y ++ R D
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 462 EKVRGMM 468
KV M
Sbjct: 729 SKVLSKM 735
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 125/302 (41%), Gaps = 25/302 (8%)
Query: 124 FAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAA 183
F M PN T+ L + + A + +L G L +I +++L+ +
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 184 SPRLFSLCR------------------QLFDEMTHR-DVVSWTVMIMGFRNAGKFDDALL 224
+ ++ C+ + +D+ + R +VV++ ++ GF + + ++A
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 225 AFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYA 284
+ M G PN++ + G ++ + + +G+ + ++LID Y
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 285 KCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEV 340
K R + +V S + E NV + +I GL +EA +L ME+ G + + V
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 341 TLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEVMR 400
T A++ G ++ ++ + G G PN Y ++D ++G+L A ++
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERM--GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 401 CM 402
M
Sbjct: 839 EM 840
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 120/318 (37%), Gaps = 80/318 (25%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP+V + +L+ F SH + L M PN + L L +
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLD---AMSMEGCEPNQIVYDALIDGLCKVGKLDE 692
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVY-------------------AASPRLF------- 188
AQ V + + G +Y ++SL+ Y + +P +
Sbjct: 693 AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Query: 189 SLCR-----------QLFDEM-THRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAP 236
LC+ Q+ +E +VV++T MI GF GK + L E+M GVAP
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
Query: 237 NRVTMVNALAACADSGAVEMGAWIHDFIRRNGW----------------ELDVVLG---- 276
N VT + C +GA+++ + + +++ W E LG
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDE 872
Query: 277 -----TA--------LIDMYAKCGRVE------EGVRVFSSVKEKNVFTWNAVIKGLALA 317
TA LID K R+E E V FS+ T+N++I+ L LA
Sbjct: 873 IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLA 932
Query: 318 KSGEEAIRLFNRMEQDGV 335
E A +LF+ M + GV
Sbjct: 933 NKVETAFQLFSEMTKKGV 950
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 148/356 (41%), Gaps = 19/356 (5%)
Query: 99 FIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSV 158
F N+L+ S +H S + M N + L + A V
Sbjct: 73 FAGNNLMAKLVRSRNHE---LAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGV 129
Query: 159 HAHVLKLGHLHDIYVHNSLLGVYAAS---PRLFSLCRQLFDEMTHRDVVSWTVMIMGFRN 215
A +LK G ++Y HN LL + + SL R++ DV S+ +I GF
Sbjct: 130 LALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189
Query: 216 AGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVL 275
+ + AL +M+ +G + + VT + A +G ++ ++ G E D+V+
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 276 GTALIDMYAKCGRVEEGVRVFSSVKEKN----VFTWNAVIKGLALAKSGEEAIRLFNRME 331
T+LI + CG ++ G +F V E+ T+N +I+G +EA +F M
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 332 QDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGS 391
+ GVR + T ++ G Q+ ++E PN Y +++ L + G
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE--PNAVTYNIIINKLCKDGL 367
Query: 392 LREAFEVMRCMP---FDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVELEPANSAY 444
+ +A E++ M P + LL ++GDL+ A KL+ L +S+Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD----EASKLLYLMLKDSSY 419
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 149/359 (41%), Gaps = 27/359 (7%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP+V+ + LI +L L++ PN T+ + L A
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE---PNAVTYNIIINKLCKDGLVAD 370
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLF-----DEMTHRDVVSWTVM 209
A + + K D +N LLG A L + L+ T DV+S+ +
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVT---MVNALAACAD-SGAVEMGAWIHDF-I 264
I G + AL ++ + A +RVT ++N+ D + A+E+ I D I
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 265 RRNGWELDVVLGTALIDMYAKCG--RVEEGVRVFSSVKE--KNVFTWNAVIKGLALAKSG 320
RN TA+ID + K G V +G+ V E +VF +N ++ L S
Sbjct: 491 VRNSDTY-----TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 321 EEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYA 380
++A RLF M++D D V+ ++ +G + + + + G P++ Y+
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM--SRAGLSPDLFTYS 603
Query: 381 CMVDLLARSGSLREA---FEVMRCMPFDPTKAMWGSLLVSSKSQGDLEFSEFVARKLVE 436
+++ + G L EA F+ M F+P + S+L SQG+ + + +KLV+
Sbjct: 604 KLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 142/356 (39%), Gaps = 54/356 (15%)
Query: 116 NSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHN 175
NS L +F M I + + + SL F A S+ + G D+ ++
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 176 SLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIMGFRNAGKFDDALLAFEQMQY 231
SL+G + + ++ EM R DVV+++ +I F GK +A + +M
Sbjct: 285 SLIGGLCNDGK-WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 232 AGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEE 291
G+AP+ +T + + + + D + G E D+V + LI+ Y K RV++
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 292 GVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLS 347
G+R+F + K N T+N ++ G + A LF M GV VT +L
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 348 A-CNHSGL--------------VDMGRQIFGFLVEG------------------KYGFIP 374
C++ L + +G I+ ++ G G P
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 375 NVKHYACMVDLLARSGSLREA---FEVMR---CMPFDPTKA------MWGSLLVSS 418
+V Y M+ L + GSL EA F M+ C P D T + GS L+SS
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 13/269 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P V F++LI F L ++ M I P+ T+ L +A
Sbjct: 313 PDVVTFSALIDVFVKEGKL---LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIM 211
+ ++ G DI ++ L+ Y + R+ R LF E++ + + +++ +++
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR-LFREISSKGLIPNTITYNTLVL 428
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
GF +GK + A F++M GV P+ VT L D+G + I + ++++ L
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
+ + +I +V++ +F S+ +K +V T+N +I GL S EA LF
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 328 NRMEQDGVRADEVTLLAVLSA-CNHSGLV 355
+M++DG D+ T ++ A SGL+
Sbjct: 549 RKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 129/285 (45%), Gaps = 9/285 (3%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLLGV 180
+ +F M ++ LP F L +++ + + G HD+Y ++
Sbjct: 55 IDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 114
Query: 181 YAASPRL---FSLCRQLFDEMTHRDVVSWTVMIMGFRNAGKFDDALLAFEQMQYAGVAPN 237
Y +L FS+ + + D ++++ ++ GF G+ +A+ ++M P+
Sbjct: 115 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 238 RVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFS 297
VT+ + G V + D + G++ D V +++ K G + +F
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 298 SVKEKN----VFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSG 353
++E+N V ++ VI L S ++A+ LFN ME G++AD VT +++ + G
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 354 LVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
D G ++ ++ G+ IP+V ++ ++D+ + G L EA E+
Sbjct: 295 KWDDGAKMLREMI-GR-NIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 268 GWELDVVLGTALIDMYAKCGRVEEGV----RVFSSVKEKNVFTWNAVIKGLALAKSGEEA 323
G+E D + + L++ + GRV E V R+ + ++ T + +I GL L EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 324 IRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMV 383
+ L +RM + G + DEVT VL+ SG + +F + E +V Y+ ++
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE--RNIKASVVQYSIVI 252
Query: 384 DLLARSGSLREAFEVMRCMPFDPTKA-------MWGSLLVSSK-SQGDLEFSEFVARKLV 435
D L + GS +A + M KA + G L K G E + R ++
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 436 ELEPANSAYYVHLSNLYAEMGRWDDVEKVRGMMKDRQLTKD 476
+ + L +++ + G+ + +++ M R + D
Sbjct: 313 ----PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 117/252 (46%), Gaps = 12/252 (4%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P+V F +LI F N L +++ M R +++PN +T+ L A
Sbjct: 252 PNVIFFTALIDTFVK---EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMIM 211
+ + ++ G D+ +N+L+ + S R+ +LF EMT++ D ++ +I
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED-GMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
G+ AGK + A F +M GV+P+ VT L ++G +E + + ++++ ++
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNV----FTWNAVIKGLALAKSGEEAIRLF 327
D++ +I + +++E +F S+ K V + +I GL EA +L
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 328 NRMEQDGVRADE 339
RM++DG E
Sbjct: 488 RRMKEDGFMPSE 499
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 133/293 (45%), Gaps = 14/293 (4%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
R +N+LI S+S ++ + M + I PN F L + + +
Sbjct: 216 RADAVTYNTLISGLSNSGRWTDAA---RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR----DVVSWTVMI 210
A++++ +++ + +++ +NSL+ + L + +FD M + DVV++ +I
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD-AKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 211 MGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWE 270
GF + + +D + F +M Y G+ + T + +G + + + + + G
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 271 LDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRL 326
D+V L+D G++E+ + + +++ ++ T+N +I+GL +EA L
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Query: 327 FNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHY 379
F + + GV+ D + + ++S GL ++ + E GF+P+ + Y
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED--GFMPSERIY 502
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 143/364 (39%), Gaps = 46/364 (12%)
Query: 95 RPHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQ 154
RP + SL+ F + ++ S+ M +PN + + L
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAV---SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNN 202
Query: 155 AQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHR---DVVSWTVMIM 211
A V + K G D +N+L+ + S R R L D + + +V+ +T +I
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 212 GFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWEL 271
F G +A +++M V PN T + + G + ++ D + G
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 272 DVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALAKSGEEAIRLF 327
DVV LI + K RVE+G+++F + + + FT+N +I G A A ++F
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 328 NRMEQDGVRADEVTLLAVLSA-CNHSGL--------------VDMGRQIFGFLVEG---- 368
NRM GV D VT +L CN+ + +D+ + +++G
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 369 --------------KYGFIPNVKHYACMVDLLARSGSLREAFEVMRCMPFD---PTKAMW 411
+ G P+ Y M+ L R G REA ++ R M D P++ ++
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Query: 412 GSLL 415
L
Sbjct: 503 DETL 506
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 145/385 (37%), Gaps = 94/385 (24%)
Query: 103 SLIRAFSHSHHHH-------NSL------TPLSIFAHMHRNTILPNHYTFPFLFKSLSAP 149
SL R+FS + HHH N L S+F M ++ +P+ F + ++
Sbjct: 33 SLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKM 92
Query: 150 CHFAQAQSVHAHVLKLGHLHDIYVHNSLLGVYAASPRLFSLCRQLFDEMT---HRDVVSW 206
F ++ + LG HD+Y L+ + RL L M +V+
Sbjct: 93 NKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTL 152
Query: 207 TVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRV---TMVNALAACAD------------- 250
++ GF +F +A+ + M G PN V T++N L D
Sbjct: 153 GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK 212
Query: 251 --------------SGAVEMGAW------IHDFIRRNGWELDVVLGTALIDMYAKCGRVE 290
SG G W + D ++R + +V+ TALID + K G +
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLL 271
Query: 291 EGVRVFSSVKEK----NVFTWNAVIKGLAL------------------------------ 316
E ++ + + NVFT+N++I G +
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 317 -----AKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYG 371
+K E+ ++LF M G+ D T ++ +G +++ +++F +V+ G
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC--G 389
Query: 372 FIPNVKHYACMVDLLARSGSLREAF 396
P++ Y ++D L +G + +A
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKAL 414
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 134/325 (41%), Gaps = 45/325 (13%)
Query: 121 LSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVHAHVLKLGHLHDIYVHNSLL-- 178
L +F M R P YT+ L K L +A + +L+ G D+ N+L+
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 179 -----------------GVYAASPRLFS---LCRQLFDEMTH-RDVVSW----------- 206
G++ +P + S + + LF+ H +V SW
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 207 -----TVMIMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIH 261
+++I G+ + + ALL E+M G P + + A + E +
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 262 DFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----NVFTWNAVIKGLALA 317
++ N + + +I + KCG++ E V +F+ +K + +V+ +NA++ G+ A
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Query: 318 KSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVK 377
EA L +ME++G RAD + +L+ +G+ ++F + G P+
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS--GIKPDGV 585
Query: 378 HYACMVDLLARSGSLREAFEVMRCM 402
Y ++ A +G EA +MR M
Sbjct: 586 TYNTLLGCFAHAGMFEEAARMMREM 610
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 16/311 (5%)
Query: 100 IFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQAQSVH 159
+ + L++A + +L S+F P T+ + L + V+
Sbjct: 164 VLSELVKALGRAKMVSKAL---SVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVY 220
Query: 160 AHVLKLGH-LHDIYVHNSLLGVYAASPRLFSLCRQLFDEMTHRDVVS----WTVMIMGFR 214
+ G D +++L+ Y R S R LFDEM + +T ++ +
Sbjct: 221 TEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR-LFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 215 NAGKFDDALLAFEQMQYAGVAPNRVTMVNALAACADSGAVEMGAWIHDFIRRNGWELDVV 274
GK + AL FE+M+ AG +P T + +G V+ + + R+G DVV
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 275 LGTALIDMYAKCGRVEEGVRVFSSVK----EKNVFTWNAVIKGLALAKSG-EEAIRLFNR 329
L+++ K GRVEE VFS + V ++N VIK L +K+ E F++
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 399
Query: 330 MEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFGFLVEGKYGFIPNVKHYACMVDLLARS 389
M+ D V E T ++ + V+ + + E GF P Y +++ L ++
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK--GFPPCPAAYCSLINALGKA 457
Query: 390 GSLREAFEVMR 400
A E+ +
Sbjct: 458 KRYEAANELFK 468
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 17/267 (6%)
Query: 96 PHVFIFNSLIRAFSHSHHHHNSLTPLSIFAHMHRNTILPNHYTFPFLFKSLSAPCHFAQA 155
P V +N++I+A S H + ++ S F M +++ P+ +T+ L +A
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVS--SWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKA 428
Query: 156 QSVHAHVLKLGHLHDIYVHNSLLGV------YAASPRLFSLCRQLFDEMTHRDVVSWTVM 209
+ + + G + SL+ Y A+ LF ++ F ++ R + VM
Sbjct: 429 LLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSR---VYAVM 485
Query: 210 IMGFRNAGKFDDALLAFEQMQYAGVAPNRVTMVNAL-AACADSGAVEMGAWIHDFIRRNG 268
I F GK +A+ F +M+ G P+ V NAL + +G + + + NG
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPD-VYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 269 WELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEKNV----FTWNAVIKGLALAKSGEEAI 324
D+ +++ +A+ G + +F ++K + T+N ++ A A EEA
Sbjct: 545 CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAA 604
Query: 325 RLFNRMEQDGVRADEVTLLAVLSACNH 351
R+ M+ G D +T ++L A +
Sbjct: 605 RMMREMKDKGFEYDAITYSSILDAVGN 631
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 109/215 (50%), Gaps = 11/215 (5%)
Query: 193 QLFDEMTH----RDVVSWTVMIMGFRNAGKFDDALLAFEQM-QYAGVAPNRVTMVNALAA 247
+LFDEM R V S+ ++ + N+ K D+A+ F+++ + G+ P+ VT + A
Sbjct: 143 KLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKA 202
Query: 248 CADSGAVEMGAWIHDFIRRNGWELDVVLGTALIDMYAKCGRVEEGVRVFSSVKEK----N 303
G+++ I + + +NG+E D++ L++ + + EG R++ +K K N
Sbjct: 203 LCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPN 262
Query: 304 VFTWNAVIKGLALAKSGEEAIRLFNRMEQDGVRADEVTLLAVLSACNHSGLVDMGRQIFG 363
+ ++N+ ++GL K +A+ L + M+ +G+ D T A+++A ++ + +
Sbjct: 263 IRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYN 322
Query: 364 FLVEGKYGFIPNVKHYACMVDLLARSGSLREAFEV 398
+ E G P+ Y ++ LL + G L A EV
Sbjct: 323 EMKEK--GLTPDTVTYCMLIPLLCKKGDLDRAVEV 355