Miyakogusa Predicted Gene

Lj0g3v0239439.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0239439.1 Non Chatacterized Hit- tr|C5YV75|C5YV75_SORBI
Putative uncharacterized protein Sb09g008006
(Fragment,72,0.0000000000001,seg,NULL,
NODE_49605_length_322_cov_609.214294.path1.1
         (97 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47570.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...   119   6e-28

>AT5G47570.1 | Symbols:  | unknown protein; Has 30201 Blast hits
          to 17322 proteins in 780 species: Archae - 12; Bacteria
          - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
          Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
          BLink). | chr5:19292869-19294666 REVERSE LENGTH=125
          Length = 125

 Score =  119 bits (297), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 57/83 (68%), Positives = 62/83 (74%)

Query: 1  MAGRLTNSASRILGGNGXXXXXXXXXXXXXXGIGPPVGKHIVPDKPLPANDELVWDNGTS 60
          MAGRL+  ASRI+GGNG              G+G PVGKHIVPDKPL  NDEL+WDNGT+
Sbjct: 1  MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61 LPEPCIDRIADTVGKYEALAWLC 83
           PEPCIDRIADTVGKYEALAWL 
Sbjct: 61 FPEPCIDRIADTVGKYEALAWLS 83