Miyakogusa Predicted Gene

Lj0g3v0239139.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0239139.2 CUFF.15690.2
         (367 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20650.1 | Symbols:  | mRNA capping enzyme family protein | c...   582   e-166
AT3G20650.2 | Symbols:  | mRNA capping enzyme family protein | c...   577   e-165
AT3G52210.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    84   2e-16
AT3G52210.3 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    81   1e-15
AT3G52210.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    79   5e-15

>AT3G20650.1 | Symbols:  | mRNA capping enzyme family protein |
           chr3:7221168-7223939 REVERSE LENGTH=370
          Length = 370

 Score =  582 bits (1499), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 272/350 (77%), Positives = 309/350 (88%), Gaps = 3/350 (0%)

Query: 20  RHDPQGDANFLEDEI---FARKVADHYSARSNQTLEEREASPIIHLKKLNNWIKSVLIQL 76
           + +P+GD+ FLEDE    FARKVADHYS R+NQTLEEREASPIIHLKKLNNWIKSVLIQL
Sbjct: 21  KSNPEGDSQFLEDETTKNFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLIQL 80

Query: 77  YARRGDAVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIKDCRTRYNGDADHHQRRKKF 136
           YAR  DAVLDLACGKGGDLIKWDKA+IGYYVGIDIAEGSI+DCRTRYNGDADHHQRRKKF
Sbjct: 81  YARPDDAVLDLACGKGGDLIKWDKARIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF 140

Query: 137 SFPARLICGDCYEVRLDQVLADDAPFDICSCQFAMHYSWSTEARARQALANVSALLRPGG 196
           SFP+RL+CGDC+EV LD++L +DAPFDICSCQFAMHYSW+TEARAR+ALANVSALLRPGG
Sbjct: 141 SFPSRLLCGDCFEVELDKILEEDAPFDICSCQFAMHYSWTTEARARRALANVSALLRPGG 200

Query: 197 IFIGTMPDANVIVKKLRAAEGLAFGNSCYWVRXXXXXXXXXXXASNPFGIKYYFHLEDAV 256
           +FIGTMPDANVI+KKLR AEGL  GNS YW+R           +S+PFGI+Y FHLEDAV
Sbjct: 201 VFIGTMPDANVIIKKLREAEGLEIGNSVYWIRFGEEYSQKKFKSSSPFGIEYVFHLEDAV 260

Query: 257 DCPEWIVPFHVFKSLAEEYGLELVFKKNSHEFVHEYLKKPEFVELMRRLGALGDGNQDQS 316
           DCPEWIVPF+VFKSLAEEY LELVF KNSHEFVHEY+KKPEFVELMRRLGALGDG+ DQS
Sbjct: 261 DCPEWIVPFNVFKSLAEEYDLELVFVKNSHEFVHEYMKKPEFVELMRRLGALGDGSNDQS 320

Query: 317 TLSPDEWDAAYLYMTFVLRKRGQPENNQARGRRDRGLMHIKEEDIMYISN 366
           TLS DEW+AAYLY++FVLRKRG+ +  +  GRR  G M++ ++D++YI +
Sbjct: 321 TLSADEWEAAYLYLSFVLRKRGESDGARRSGRRKNGKMNLSKDDVLYIDS 370


>AT3G20650.2 | Symbols:  | mRNA capping enzyme family protein |
           chr3:7221168-7223939 REVERSE LENGTH=369
          Length = 369

 Score =  577 bits (1487), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 272/350 (77%), Positives = 309/350 (88%), Gaps = 4/350 (1%)

Query: 20  RHDPQGDANFLEDEI---FARKVADHYSARSNQTLEEREASPIIHLKKLNNWIKSVLIQL 76
           + +P+GD+ FLEDE    FARKVADHYS R+NQTLEEREASPIIHLKKLNNWIKSVLIQL
Sbjct: 21  KSNPEGDSQFLEDETTKNFARKVADHYSRRTNQTLEEREASPIIHLKKLNNWIKSVLIQL 80

Query: 77  YARRGDAVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIKDCRTRYNGDADHHQRRKKF 136
           YAR  DAVLDLACGKGGDLIKWDKA+IGYYVGIDIAEGSI+DCRTRYNGDADHHQRRKKF
Sbjct: 81  YARPDDAVLDLACGKGGDLIKWDKARIGYYVGIDIAEGSIEDCRTRYNGDADHHQRRKKF 140

Query: 137 SFPARLICGDCYEVRLDQVLADDAPFDICSCQFAMHYSWSTEARARQALANVSALLRPGG 196
           SFP+RL+CGDC+EV LD++L +DAPFDICSCQFAMHYSW+TEARAR+ALANVSALLRPGG
Sbjct: 141 SFPSRLLCGDCFEVELDKILEEDAPFDICSCQFAMHYSWTTEARARRALANVSALLRPGG 200

Query: 197 IFIGTMPDANVIVKKLRAAEGLAFGNSCYWVRXXXXXXXXXXXASNPFGIKYYFHLEDAV 256
           +FIGTMPDANVI+KKLR AEGL  GNS YW+R           +S+PFGI+Y FHLEDAV
Sbjct: 201 VFIGTMPDANVIIKKLREAEGLEIGNSVYWIR-FGEEYSQKFKSSSPFGIEYVFHLEDAV 259

Query: 257 DCPEWIVPFHVFKSLAEEYGLELVFKKNSHEFVHEYLKKPEFVELMRRLGALGDGNQDQS 316
           DCPEWIVPF+VFKSLAEEY LELVF KNSHEFVHEY+KKPEFVELMRRLGALGDG+ DQS
Sbjct: 260 DCPEWIVPFNVFKSLAEEYDLELVFVKNSHEFVHEYMKKPEFVELMRRLGALGDGSNDQS 319

Query: 317 TLSPDEWDAAYLYMTFVLRKRGQPENNQARGRRDRGLMHIKEEDIMYISN 366
           TLS DEW+AAYLY++FVLRKRG+ +  +  GRR  G M++ ++D++YI +
Sbjct: 320 TLSADEWEAAYLYLSFVLRKRGESDGARRSGRRKNGKMNLSKDDVLYIDS 369


>AT3G52210.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:19367035-19369293 FORWARD LENGTH=354
          Length = 354

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 28/286 (9%)

Query: 64  KLNNWIKSVLIQLYARRGDAVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIKDCRTRY 123
           +L ++ K+ +I ++A     V +L CG   +  KW+ A IG+Y+GID + G I   R  +
Sbjct: 15  RLFDFAKTAIINIFAHPYATVCELYCGGAPETDKWEAAPIGHYIGIDTSSG-ISSVREAW 73

Query: 124 NGDADHHQRRKKFSFPARLICGDCYEVRLDQVLADDAPFDICSCQFAMHYSWSTEARARQ 183
                ++      + P++    D +E++L + L      D+ SC   +   + TE  AR+
Sbjct: 74  ESQRKNYDVEFFEADPSK----DDFEIQLQKKLEQA---DLVSCWRHLQLCFETEESARR 126

Query: 184 ALANVSALLRPGGIFIGTMPDANVIVKKLR----------AAEGLAFGNSCYWVRXXXXX 233
            L NV+ LL+PGG F G  PD++ I  K +           A+   F N   ++R     
Sbjct: 127 LLTNVACLLKPGGYFFGITPDSSTIWAKYQKNVEAYHNRSGAKPNVFPN---YIRSESYM 183

Query: 234 XXXXXXASN--PFGIKYYFHLE-DAVDCPEWIVPFHVFKSLAEEYGLELVFKKNSHEFVH 290
                       FG +Y      D       +V F     LA E GLE V  ++  +F  
Sbjct: 184 ITFELEEEKFPLFGKRYQLKFSGDNASEDHCLVHFPSLIRLAREAGLEFVEIQSLTDFYD 243

Query: 291 EYLKKPEFVELMRRLGALGDGNQDQSTLSPDEWDAAYLYMTFVLRK 336
           +   + +F  L+   G   +    +  L P  +D   LY TF+ +K
Sbjct: 244 D--NRAQFASLLMNAGP--NFVDPRGKLLPRAFDLLGLYATFIFQK 285


>AT3G52210.3 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:19367035-19369293 FORWARD LENGTH=355
          Length = 355

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 121/286 (42%), Gaps = 27/286 (9%)

Query: 64  KLNNWIKSVLIQLYARRGDAVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIKDCRTRY 123
           +L ++ K+ +I ++A     V +L CG   +  KW+ A IG+Y+GI      I   R  +
Sbjct: 15  RLFDFAKTAIINIFAHPYATVCELYCGGAPETDKWEAAPIGHYIGIVDTSSGISSVREAW 74

Query: 124 NGDADHHQRRKKFSFPARLICGDCYEVRLDQVLADDAPFDICSCQFAMHYSWSTEARARQ 183
                ++      + P++    D +E++L + L      D+ SC   +   + TE  AR+
Sbjct: 75  ESQRKNYDVEFFEADPSK----DDFEIQLQKKLEQA---DLVSCWRHLQLCFETEESARR 127

Query: 184 ALANVSALLRPGGIFIGTMPDANVIVKKLR----------AAEGLAFGNSCYWVRXXXXX 233
            L NV+ LL+PGG F G  PD++ I  K +           A+   F N   ++R     
Sbjct: 128 LLTNVACLLKPGGYFFGITPDSSTIWAKYQKNVEAYHNRSGAKPNVFPN---YIRSESYM 184

Query: 234 XXXXXXASN--PFGIKYYFHLE-DAVDCPEWIVPFHVFKSLAEEYGLELVFKKNSHEFVH 290
                       FG +Y      D       +V F     LA E GLE V  ++  +F  
Sbjct: 185 ITFELEEEKFPLFGKRYQLKFSGDNASEDHCLVHFPSLIRLAREAGLEFVEIQSLTDFYD 244

Query: 291 EYLKKPEFVELMRRLGALGDGNQDQSTLSPDEWDAAYLYMTFVLRK 336
           +   + +F  L+   G   +    +  L P  +D   LY TF+ +K
Sbjct: 245 D--NRAQFASLLMNAGP--NFVDPRGKLLPRAFDLLGLYATFIFQK 286


>AT3G52210.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:19367035-19368699 FORWARD LENGTH=250
          Length = 250

 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 8/150 (5%)

Query: 64  KLNNWIKSVLIQLYARRGDAVLDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIKDCRTRY 123
           +L ++ K+ +I ++A     V +L CG   +  KW+ A IG+Y+GID + G I   R  +
Sbjct: 15  RLFDFAKTAIINIFAHPYATVCELYCGGAPETDKWEAAPIGHYIGIDTSSG-ISSVREAW 73

Query: 124 NGDADHHQRRKKFSFPARLICGDCYEVRLDQVLADDAPFDICSCQFAMHYSWSTEARARQ 183
                ++      + P++    D +E++L + L      D+ SC   +   + TE  AR+
Sbjct: 74  ESQRKNYDVEFFEADPSK----DDFEIQLQKKLEQA---DLVSCWRHLQLCFETEESARR 126

Query: 184 ALANVSALLRPGGIFIGTMPDANVIVKKLR 213
            L NV+ LL+PGG F G  PD++ I  K +
Sbjct: 127 LLTNVACLLKPGGYFFGITPDSSTIWAKYQ 156