Miyakogusa Predicted Gene

Lj0g3v0238989.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0238989.2 Non Chatacterized Hit- tr|K4DHX2|K4DHX2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.25,4e-18,DUF1977,Domain of unknown function DUF1977,
DnaJ-like; seg,NULL,CUFF.15689.2
         (144 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G57340.2 | Symbols:  | Heat shock protein DnaJ, N-terminal wi...   137   2e-33
AT3G57340.1 | Symbols:  | Heat shock protein DnaJ, N-terminal wi...   137   2e-33
AT5G49060.1 | Symbols:  | Heat shock protein DnaJ, N-terminal wi...    55   2e-08

>AT3G57340.2 | Symbols:  | Heat shock protein DnaJ, N-terminal with
           domain of unknown function (DUF1977) |
           chr3:21219175-21220278 FORWARD LENGTH=367
          Length = 367

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 86/127 (67%)

Query: 17  GMGHRHADNDNHGSGGGFNARAXXXXXXXXXXXXXXXXXSSEPIYTLSQSYPYEHRVTTP 76
           G   +   N+N     GFNAR                  SS+P+Y LS +YPY+++ TT 
Sbjct: 237 GATRQRTANNNQAPDAGFNARILLQLLPVVFILLLNFMPSSQPVYQLSATYPYQYKFTTQ 296

Query: 77  RGVNYYVKSTKFAQDYPEGTRERETVEDKVEREYFGILRQNCQFELQRRQWGYIKETPHC 136
           +GVNY+VKS+KF QDYP  + +R T+E++VER+Y  IL QNC++E+QR+QWG+++ETPHC
Sbjct: 297 KGVNYFVKSSKFEQDYPRDSNDRHTLEEQVERDYVSILSQNCRYEMQRKQWGFVRETPHC 356

Query: 137 DILRKYE 143
           D++R+++
Sbjct: 357 DMMRRFD 363


>AT3G57340.1 | Symbols:  | Heat shock protein DnaJ, N-terminal with
           domain of unknown function (DUF1977) |
           chr3:21219175-21220278 FORWARD LENGTH=367
          Length = 367

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 86/127 (67%)

Query: 17  GMGHRHADNDNHGSGGGFNARAXXXXXXXXXXXXXXXXXSSEPIYTLSQSYPYEHRVTTP 76
           G   +   N+N     GFNAR                  SS+P+Y LS +YPY+++ TT 
Sbjct: 237 GATRQRTANNNQAPDAGFNARILLQLLPVVFILLLNFMPSSQPVYQLSATYPYQYKFTTQ 296

Query: 77  RGVNYYVKSTKFAQDYPEGTRERETVEDKVEREYFGILRQNCQFELQRRQWGYIKETPHC 136
           +GVNY+VKS+KF QDYP  + +R T+E++VER+Y  IL QNC++E+QR+QWG+++ETPHC
Sbjct: 297 KGVNYFVKSSKFEQDYPRDSNDRHTLEEQVERDYVSILSQNCRYEMQRKQWGFVRETPHC 356

Query: 137 DILRKYE 143
           D++R+++
Sbjct: 357 DMMRRFD 363


>AT5G49060.1 | Symbols:  | Heat shock protein DnaJ, N-terminal with
           domain of unknown function (DUF1977) |
           chr5:19886764-19888136 FORWARD LENGTH=354
          Length = 354

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 57  SEPIYTLSQSYPYEHRVTTPRG-VNYYVKS-TKFAQDYPEGTRERETVEDKVEREYFGIL 114
           SEP Y+L ++  Y+   TT    +++YV+S + F + +P  +  R  +E  V +EY   L
Sbjct: 258 SEPDYSLHKNQSYQIPKTTQNTEISFYVRSASAFDEKFPLSSSARANLEGNVIKEYKHFL 317

Query: 115 RQNCQFELQRRQWGYIKETPHC 136
            Q+C+ ELQ+R+W     TPHC
Sbjct: 318 FQSCRIELQKRRWNKKIPTPHC 339