Miyakogusa Predicted Gene

Lj0g3v0238949.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0238949.1 Non Chatacterized Hit- tr|G5A448|G5A448_PHYSP
Putative uncharacterized protein OS=Phytophthora sojae,23.45,2e-18,no
description,Armadillo-like helical; seg,NULL; ARM
repeat,Armadillo-type fold; SUBFAMILY NOT NAMED,CUFF.15695.1
         (503 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31160.1 | Symbols: DCAF1 | DDB1-CUL4 associated factor 1 | c...   546   e-155

>AT4G31160.1 | Symbols: DCAF1 | DDB1-CUL4 associated factor 1 |
            chr4:15145936-15152939 FORWARD LENGTH=1883
          Length = 1883

 Score =  546 bits (1407), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 288/506 (56%), Positives = 342/506 (67%), Gaps = 57/506 (11%)

Query: 1    MERVCALPSDVVYHVVELALQLLECNQDQARENXXXXXXXXXXXXXXXXXXDSQDGLQKL 60
            MERVCALP  V++ VV+LA++LL+C+QDQAR+N                  D+QD LQKL
Sbjct: 613  MERVCALPLVVIHQVVKLAIELLDCSQDQARKNSALFFAAAFVFRAILDAFDAQDSLQKL 672

Query: 61   LGLLNDVASVRSGVTXXXXXXXXXXXXRNDRSSAEALTSSEKVVAYEACVALRKYFRAHL 120
            L +L D ASVR+G                DRS+ E +TSSEK +A+  C ALR+YFRAHL
Sbjct: 673  LAILKDAASVRTGAN-------------TDRSAPEVMTSSEKQMAFHTCFALRQYFRAHL 719

Query: 121  LLLVDSIRPNKSNRSAARNV--PSIRAAYKPLLISNEAIDAVFQQLQKDRKLGPAFVRTY 178
            LLLVDSIRP++ +R    +   P+IRAAYKPL ISNEA+DA+F QLQKDR+LGP FV+  
Sbjct: 720  LLLVDSIRPSRISRGGVPSSMKPNIRAAYKPLDISNEAVDAIFLQLQKDRRLGPTFVKAQ 779

Query: 179  WPAVEKFVSYNGHITMLELCQAPPQERYLHDLVQYALGILHIVTLVPSSRKMIVNTTLSN 238
            WPAV  F++ +GH+TMLELCQ PP +RYLHDL+QYA G+LHIVT +P  RK I + TLSN
Sbjct: 780  WPAVNNFLASSGHVTMLELCQTPPVDRYLHDLLQYAFGVLHIVTSIPDGRKAIAHATLSN 839

Query: 239  NRAGIAVILDAANIASSHVDPEIIQPALNVLVNLVCPPPSISNKQSAVMQGQQFVSSQTS 298
            NRAGIAVILDAANI++S VDPEIIQPALNVL+NLVCPPPS+SNK   + Q  Q V  Q +
Sbjct: 840  NRAGIAVILDAANISNSIVDPEIIQPALNVLINLVCPPPSLSNK-PPLAQNHQPVPGQAT 898

Query: 299  NGPPSETRDRNAERNTVTVDRAVHVTSQIDPRERNGESSAIDRSSAAALSAQSVNNTPQT 358
              P                                        S+  A+  QS  N PQT
Sbjct: 899  TRP----------------------------------------STDVAVGTQSTGNAPQT 918

Query: 359  PGPAASSGLVGDRRIXXXXXXXXXXXXXQLEQAYRQAREAVRSNNGIKVLLHLLQPRIY- 417
            P   ASSGLVGDRRI             +LEQ YRQAREAVR N+GIK+LL LLQPRIY 
Sbjct: 919  PVAPASSGLVGDRRIFLGAGTGSAGLAAKLEQVYRQAREAVRGNDGIKILLKLLQPRIYV 978

Query: 418  SSPASLDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSPTLGNEQGRWQA 477
            + PA+ DCLRALACRVLLGLARDDTIA ILTKL+VGK LSELIRDSG  + G +QGRWQA
Sbjct: 979  NPPATPDCLRALACRVLLGLARDDTIAQILTKLEVGKSLSELIRDSGGQSSGTDQGRWQA 1038

Query: 478  ELSQAAIELIGIVTNLGCASTLAATD 503
            EL+Q A+ELIGIVTN G A+TL A+D
Sbjct: 1039 ELAQVALELIGIVTNSGHATTLTASD 1064