Miyakogusa Predicted Gene
- Lj0g3v0238469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0238469.1 tr|G7J375|G7J375_MEDTR Pre-mRNA splicing factor
ATP-dependent RNA helicase-like protein OS=Medicago ,75.17,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
HELICASE_ATP_BIND_1,Helicase, superfamily,CUFF.15708.1
(912 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 961 0.0
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 941 0.0
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 367 e-101
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 332 1e-90
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 331 1e-90
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 328 8e-90
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 325 1e-88
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 301 2e-81
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 291 2e-78
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 290 4e-78
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 288 1e-77
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 288 1e-77
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 261 1e-69
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 148 1e-35
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 144 3e-34
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 143 5e-34
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 141 3e-33
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 134 3e-31
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 134 3e-31
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 132 1e-30
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 125 1e-28
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 125 1e-28
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 115 2e-25
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 114 4e-25
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 79 1e-14
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/948 (53%), Positives = 636/948 (67%), Gaps = 51/948 (5%)
Query: 1 MRKSPHPSAARRSSDFNRQPPHV-----RWSPR------PVVHQ----SNHHRKPEFQSN 45
MR S PS RS+ RQ R++ R P+ H+ H + P
Sbjct: 1 MRNSFPPSDGGRSATDRRQQSSHSSSTNRYNSRSAQSSPPLNHRPTWNQQHSQYPNSNFP 60
Query: 46 SHHRLDRPPER--NPPL-RA-PNFVINL------------CFLRLRHGFDSLRRDDVESL 89
++R DR P +PP+ RA PNF++ L CF S ++ ++ESL
Sbjct: 61 PNYRRDRNPSSGYSPPVTRARPNFIVQLLHPAAANSDTKLCF--------STKKQEIESL 112
Query: 90 ISRCIPRPENFTFYPCDRVAASLNFQQWTDARDAFVCLWESRLSGNHDFTPELSSKVLLP 149
C E+ +A S +F+QW DAR A V LW+ RL G H+F PEL V++P
Sbjct: 113 ALLCEIPEESIHVPQFGCIAGSFSFRQWVDARSAVVALWDYRLQGKHEFVPELIPNVIVP 172
Query: 150 SDRVELDGRLRSLFASHVKGLMXXXXXXXXXXXXXXLSKEIAHVSKSLRNPLPIGVFPQQ 209
SD EL RLR LF+SH+ LM K VS S + L VF
Sbjct: 173 SDMNELKDRLRDLFSSHILSLMENGEGVKKVRLEIE-EKSRQVVSFSSKRGLKFEVF--- 228
Query: 210 LEKKKGLEVEKDLVERRIKEFESAMRCILQYLENNDM------EEGEGFVPIFRFDGSLD 263
EKKK +E E+DLV R++EF +AM+ IL+YL D +E EG V +F +G+ D
Sbjct: 229 -EKKKAIEAERDLVVNRLEEFNNAMKSILRYLIGQDGYEFDLDDEEEGDVAVFCLEGAYD 287
Query: 264 WKHIQSXXXXXXXXXXXXXXXYAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSG 323
W+ I YAYRR IL++IH +QIMVLIGETGSGKSTQLVQFLADSG
Sbjct: 288 WRRIHCLIRRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSG 347
Query: 324 IVGAECIVCTQPRKIAAKSLTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHC 383
+ +E IVCTQPRKIAA +L RV+EESSGCY +N + C FSS+ + S++ +MTD+C
Sbjct: 348 VAASESIVCTQPRKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNC 407
Query: 384 LLQHCMSDKNLFGVSCIVIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQL 443
LLQH M D++L G+SC++IDEAHERS RR+ LR++IMSATADAKQL
Sbjct: 408 LLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQL 467
Query: 444 SDYFYCCGIFGVRGRKFPVEVRYAPSDTGXXXXXXXXXXXX-XXXRMATEIHKREKEGTI 502
S YF+ CGI V GR FPVE+ Y+PSDT +MA EIHK EKEGTI
Sbjct: 468 SQYFFSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTI 527
Query: 503 LAFLTSQAEVEWACENFAALAAVALPLHGKLSSEEQFHVFQSFPGKRKVIFSTNLAETSL 562
LAFLTSQAEVEWACE F +A+ALPLHGKLS EEQF VFQ+ PG+RKVIF+TN+AETSL
Sbjct: 528 LAFLTSQAEVEWACERFITPSAIALPLHGKLSFEEQFRVFQNHPGRRKVIFATNIAETSL 587
Query: 563 TIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEA 622
TIPGVKYVIDSG+VK+S+++P +GM++LKV +S+SSA QRAGRAGRTEPG+CYRLYS+
Sbjct: 588 TIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKN 647
Query: 623 DYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVI 682
D+ SM LNQEPEIRRVHLGVA+LR+LALGV N+ +F+FVDAP P +I MA++NL+QL +
Sbjct: 648 DFDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAV 707
Query: 683 KLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGN 742
N VHELT+EG LVKLG+EP+LGKLILGC +H + +EGI LA++M NASSIFCRVGN
Sbjct: 708 VEKNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGN 767
Query: 743 EGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTY 802
DK ++D KVQFC+++GDLFTLLSVY EW +LP ER+NKWCWENS+NAKSMRRC DT
Sbjct: 768 FDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTV 827
Query: 803 XXXXXXXXXXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQ 862
+PS W W+P + + HD ++K VIL+SLAENVA Y+G NQLGYEVA
Sbjct: 828 KELEICIERELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVAL 887
Query: 863 TGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFDFQSLH 910
TG+ VQLHPSCSLL F ++P WVVFGELLS+ ++YLVCV+A DF++L+
Sbjct: 888 TGQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALY 935
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/917 (54%), Positives = 623/917 (67%), Gaps = 27/917 (2%)
Query: 13 SSDFNRQPPHVRWSPRPVVH------QSNHHRKPEFQSNSHHRLDRPPER--NPPL-RA- 62
SS NR S P+ H Q + + F N +R DR P +PP+ RA
Sbjct: 24 SSSTNRYNSRSAQSSPPLNHCTTWNQQHSQYHNTNFPPN--YRRDRAPSSGFSPPVTRAR 81
Query: 63 PNFVINLCFLRLRHGFDSL-RRDDVESLISRCIPRPENFTFYPCDRVAASLNFQQWTDAR 121
PNF++ L + L ++ ++ES+ C E+ +AAS +F+QW DAR
Sbjct: 82 PNFIVQLLHPAAANSDTKLSKKQEIESIALLCEIPEESVHVPQFGCIAASFSFRQWVDAR 141
Query: 122 DAFVCLWESRLSGNHDFTPELSSKVLLPSDRVELDGRLRSLFASHVKGLMXXXX-XXXXX 180
A V LW+ RL G HDF PEL V++PSD EL RLR LF+SHV LM
Sbjct: 142 SAVVALWDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRDLFSSHVLSLMENGQGVKKVR 201
Query: 181 XXXXXLSKEIAHVSKSLRNPLPIGVFPQQLEKKKGLEVEKDLVERRIKEFESAMRCILQY 240
S+++A S S + L VF EKKK LE E+DLV R+ EF +AM+ IL+Y
Sbjct: 202 MEIDDKSRQVA--SFSSKRGLKFEVF----EKKKALEAERDLVVNRLDEFNNAMKSILRY 255
Query: 241 LENNDMEE------GEGFVPIFRFDGSLDWKHIQSXXXXXXXXXXXXXXXYAYRRDILRQ 294
L D E + V +F +G+ DW+ I YAYRR IL++
Sbjct: 256 LIGQDGYEFDVDDEDDEDVAVFSLEGAYDWRRIHYLILRECRRLEDGLPIYAYRRQILKK 315
Query: 295 IHYQQIMVLIGETGSGKSTQLVQFLADSGIVGAECIVCTQPRKIAAKSLTQRVQEESSGC 354
IH +QIMVLIGETGSGKSTQLVQFLADSG+ +E IVCTQPRKIAA +LT RV+EESSGC
Sbjct: 316 IHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLTDRVREESSGC 375
Query: 355 YGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDEAHERSXXXXX 414
Y +N + C FSS+ + S++ +MTD+CLLQH M D++L G+SC++IDEAHERS
Sbjct: 376 YEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDL 435
Query: 415 XXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEVRYAPSDTGXX 474
RR+ LR++IMSATADA QLS Y + CGI V GR FPVE+ Y+PS T
Sbjct: 436 LLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEEN 495
Query: 475 XXXXXXXXXX-XXXRMATEIHKREKEGTILAFLTSQAEVEWACENFAALAAVALPLHGKL 533
+MA EIHK EKEGTILAFLTSQAEVEWACE F A +A+ALPLHGKL
Sbjct: 496 SVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFVAPSAIALPLHGKL 555
Query: 534 SSEEQFHVFQSFPGKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVS 593
S EEQF VFQ++PG+RKVIF+TN+AETSLTIPGVKYVIDSG+VK+S+++P +GM++LKV
Sbjct: 556 SFEEQFMVFQNYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVC 615
Query: 594 WISKSSADQRAGRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVK 653
+S+SSA QRAGRAGRTEPG+CYRLYS+ D+ SM LNQEPEIRRVHLGVA+LR+LALG+
Sbjct: 616 QVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGID 675
Query: 654 NVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILG 713
N+ F+FVDAP P +I MAI+NL+QL + N V ELT+EG LVKLG+EP+LGKLILG
Sbjct: 676 NIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILG 735
Query: 714 CRKHNLFREGIALASLMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEW 773
C +H + +EGI LA++M NASSIFCRVGN DK ++D KVQFC+ +GDLFTLLSVY EW
Sbjct: 736 CFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEW 795
Query: 774 EALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXXXXXXXXXTPSNWRWDPYKPSFHDT 833
+LP +R+NKWCWENS+NAKSMRRC DT +PS W W+P + + HD
Sbjct: 796 ASLPRDRRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDK 855
Query: 834 NMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSV 893
+K VIL+SLAENVA Y+G +QLGYEVA T + VQLHPSCSLL F ++P WVVFGELLS+
Sbjct: 856 YLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFGELLSI 915
Query: 894 SNEYLVCVSAFDFQSLH 910
++YLVCV+AFDF++L+
Sbjct: 916 VDQYLVCVTAFDFEALY 932
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/632 (34%), Positives = 335/632 (53%), Gaps = 41/632 (6%)
Query: 285 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIVGAECIVCTQPRKIAAKSLT 344
Y ++++++ +H Q++V+IGETGSGK+TQ+ Q+LA++G I CTQPR++AA S+
Sbjct: 518 YKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVA 577
Query: 345 QRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDE 404
+RV EE GC + F D+ I +MTD LL+ + D+NL S I++DE
Sbjct: 578 KRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDE 636
Query: 405 AHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEV 464
AHER+ RR+ LR+I+ SAT DA++ S YF+ C IF + GR FPVE+
Sbjct: 637 AHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEI 696
Query: 465 RYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWAC----ENFA 520
Y +IH E EG IL FLT Q E++ AC E
Sbjct: 697 LYTKQPETDYLDAALIT--------VLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMK 748
Query: 521 ALAA-----VALPLHGKLSSEEQFHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDSG 574
L + LP++ L SE Q +F P GKRKV+ +TN+AE SLTI G+ YV+D G
Sbjct: 749 GLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPG 808
Query: 575 LVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQS-MELNQEP 633
K + ++P G+ L ++ IS++SA QRAGRAGRT PGKCYRLY+E+ Y++ M P
Sbjct: 809 FAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIP 868
Query: 634 EIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELTR 693
EI+R++LG+ L + A+G+ ++ FDF+D P P ++ A+ L L + + LT+
Sbjct: 869 EIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGAL---DEEGLLTK 925
Query: 694 EGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQRSDCHK 753
GR + + +EP L K++L E + + + M +IF R + + ++D +
Sbjct: 926 LGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIA-MIQTGNIFYRPREK--QAQADQKR 982
Query: 754 VQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXXXXXX 813
+F +GD TLL+VY W+A WC+EN I ++S+RR D
Sbjct: 983 AKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFIQSRSLRRAQDVRKQLLSIM---- 1036
Query: 814 XXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLHPSC 873
++ D + T ++K I + + A Q GY + V +HPS
Sbjct: 1037 -----DKYKLDVVTAGKNFTKIRKAITAGFFFHGARKD--PQEGYRTLVENQPVYIHPSS 1089
Query: 874 SLLVFAERPGWVVFGELLSVSNEYLVCVSAFD 905
+L F +P WV++ +L+ + EY+ V+ D
Sbjct: 1090 AL--FQRQPDWVIYHDLVMTTKEYMREVTVID 1119
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 332 bits (850), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 210/632 (33%), Positives = 325/632 (51%), Gaps = 45/632 (7%)
Query: 285 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIVGAECIVCTQPRKIAAKSLT 344
Y YR +L+ + Q++V++G+TGSGK+TQ+ Q+L ++G + CTQPR++AA S+
Sbjct: 397 YTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVA 456
Query: 345 QRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVID 403
RV +E G YS+ F + + +MTD LL+ + + +L S +++D
Sbjct: 457 ARVAQEMGVKLGHEV--GYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVD 514
Query: 404 EAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVE 463
EAHER+ R L+++I SAT DA++ SDYF IF GR++PVE
Sbjct: 515 EAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVE 574
Query: 464 VRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACE----NF 519
+ Y + IH RE G IL F T Q E+E A E
Sbjct: 575 INYTSAPEADYMDAAIVTILT--------IHVREPLGDILVFFTGQEEIETAEEILKHRI 626
Query: 520 AALAA-----VALPLHGKLSSEEQFHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDS 573
L + P++ L SE Q +F+ P G RKV+ +TN+AETSLTI G+KYV+D
Sbjct: 627 RGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDP 686
Query: 574 GLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQS-MELNQE 632
G K ++P +GM L ++ ISK+SA QRAGRAGRT PGKCYRLY+ +Y + +E N
Sbjct: 687 GFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTV 746
Query: 633 PEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELT 692
PE++R +L VL + +LG+ ++ +FDF+D P ++ ++ L L + N + ELT
Sbjct: 747 PEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGAL---NKLGELT 803
Query: 693 REGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQ-RSDC 751
+ GR + + ++P L K+I+ K+ E I++A++++ SIF R DKQ +D
Sbjct: 804 KAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYR---PKDKQVHADN 860
Query: 752 HKVQFCHRD-GDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXXX 810
++ F + GD LL VY W+ T +WC+EN I +SM+R D
Sbjct: 861 ARMNFHTGNVGDHIALLKVYSSWK--ETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLE 918
Query: 811 XXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLH 870
+ + D +++K I++ + A Y + + V +H
Sbjct: 919 RVEIDISSNLNELD---------SVRKSIVAGFFPHTAKLQKNG--SYRTVKHPQTVHIH 967
Query: 871 PSCSLLVFAERPGWVVFGELLSVSNEYLVCVS 902
P+ L P WVV+ EL+ S EY+ V+
Sbjct: 968 PNSGLSQVL--PRWVVYHELVLTSKEYMRQVT 997
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 210/632 (33%), Positives = 325/632 (51%), Gaps = 45/632 (7%)
Query: 285 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIVGAECIVCTQPRKIAAKSLT 344
Y YR +L+ + Q++V++G+TGSGK+TQ+ Q+L ++G + CTQPR++AA S+
Sbjct: 407 YTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVA 466
Query: 345 QRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVID 403
RV +E G YS+ F + + +MTD LL+ + + +L S +++D
Sbjct: 467 ARVAQEMGVKLGHEV--GYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVD 524
Query: 404 EAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVE 463
EAHER+ R L+++I SAT DA++ SDYF IF GR++PVE
Sbjct: 525 EAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVE 584
Query: 464 VRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACE----NF 519
+ Y + IH RE G IL F T Q E+E A E
Sbjct: 585 INYTSAPEADYMDAAIVTILT--------IHVREPLGDILVFFTGQEEIETAEEILKHRI 636
Query: 520 AALAA-----VALPLHGKLSSEEQFHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDS 573
L + P++ L SE Q +F+ P G RKV+ +TN+AETSLTI G+KYV+D
Sbjct: 637 RGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDP 696
Query: 574 GLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQS-MELNQE 632
G K ++P +GM L ++ ISK+SA QRAGRAGRT PGKCYRLY+ +Y + +E N
Sbjct: 697 GFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTV 756
Query: 633 PEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELT 692
PE++R +L VL + +LG+ ++ +FDF+D P ++ ++ L L + N + ELT
Sbjct: 757 PEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGAL---NKLGELT 813
Query: 693 REGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQ-RSDC 751
+ GR + + ++P L K+I+ K+ E I++A++++ SIF R DKQ +D
Sbjct: 814 KAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYR---PKDKQVHADN 870
Query: 752 HKVQFCHRD-GDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXXX 810
++ F + GD LL VY W+ T +WC+EN I +SM+R D
Sbjct: 871 ARMNFHTGNVGDHIALLKVYSSWKE--TNFSTQWCYENYIQVRSMKRARDIRDQLEGLLE 928
Query: 811 XXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLH 870
+ + D +++K I++ + A Y + + V +H
Sbjct: 929 RVEIDISSNLNELD---------SVRKSIVAGFFPHTAKLQKNG--SYRTVKHPQTVHIH 977
Query: 871 PSCSLLVFAERPGWVVFGELLSVSNEYLVCVS 902
P+ L P WVV+ EL+ S EY+ V+
Sbjct: 978 PNSGLSQVL--PRWVVYHELVLTSKEYMRQVT 1007
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 328 bits (842), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 209/636 (32%), Positives = 328/636 (51%), Gaps = 43/636 (6%)
Query: 285 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIVGAECIVCTQPRKIAAKSLT 344
++ R ++L+ I Q++V++GETGSGK+TQL Q+L + G + CTQPR++AA S+
Sbjct: 561 FSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAMSVA 620
Query: 345 QRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDE 404
+RV EE GD I F ++ I +MTD LL+ + D +L +V+DE
Sbjct: 621 KRVSEEMETELGDK-IGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDE 679
Query: 405 AHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEV 464
AHERS RR ++I+ SAT +A++ S++F IF + GR FPV +
Sbjct: 680 AHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFPVNI 739
Query: 465 RYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWAC----ENFA 520
Y+ + + A IH G IL F+T Q E+E AC E
Sbjct: 740 LYSKTPC--------EDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERME 791
Query: 521 ALAA---------VALPLHGKLSSEEQFHVFQS-FPGKRKVIFSTNLAETSLTIPGVKYV 570
L + + LP++ +L ++ Q +FQ G RK I +TN+AETSLT+ G+ YV
Sbjct: 792 QLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYV 851
Query: 571 IDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADY-QSMEL 629
ID+G K F+P GM+ L+V IS++++DQRAGRAGRT PG CYRLY+E+ Y M
Sbjct: 852 IDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLP 911
Query: 630 NQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVH 689
+ PEI+R +LG VL + +L + N+ DFDF+D P +I + ++ QL V+ NNV
Sbjct: 912 SPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENI---LNSMYQLWVLGALNNVG 968
Query: 690 ELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQRS 749
LT G +V+ ++P L K++L + + E + + S+++ S+F R ++ S
Sbjct: 969 GLTDLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLS-VPSVFFRPKERAEE--S 1025
Query: 750 DCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXX 809
D + +F + D TLL+VY +W+ + + WC ++ + K +R+ +
Sbjct: 1026 DAAREKFFVPESDHLTLLNVYQQWKE--HDYRGDWCNDHYLQVKGLRKAREVRSQLLDIL 1083
Query: 810 XXXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQL 869
WD ++K I S+ N A G + Y +TG L
Sbjct: 1084 KQLKIELRSCGPDWDI---------VRKAICSAYFHNSARLKGVGE--YVNCRTGMPCHL 1132
Query: 870 HPSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAFD 905
HPS +L P +VV+ EL+ + EY+ C ++ +
Sbjct: 1133 HPSSALYGLGYTPDYVVYHELILTTKEYMQCATSVE 1168
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 325 bits (832), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 322/634 (50%), Gaps = 45/634 (7%)
Query: 285 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIVGAECIVCTQPRKIAAKSLT 344
Y YR +L + Q+++++GETGSGK+TQ+ Q+L ++G + CTQPR++AA S+
Sbjct: 407 YTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVA 466
Query: 345 QRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVID 403
RV +E G G YS+ F + + +MTD LL+ + + +L S I++D
Sbjct: 467 ARVAQEMGGKLGHEV--GYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVD 524
Query: 404 EAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVE 463
EAHER+ R L+++I SAT DA++ SD+F IF GR++PV+
Sbjct: 525 EAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVD 584
Query: 464 VRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACENFA--- 520
+ + + IH +E G +L FL Q E+E EN
Sbjct: 585 ICFTTAPEADYMDAAITTVLT--------IHVKEPLGDVLVFLPGQEEIEAVEENLKHKI 636
Query: 521 -ALAA-----VALPLHGKLSSEEQFHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDS 573
L + P++ L SE Q +F+ P G RKV+ +TN+AETSLTI G+KYV+D
Sbjct: 637 RGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDP 696
Query: 574 GLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEAD-YQSMELNQE 632
G K ++P +GM L V+ ISK+SA QR GRAGRT PGKCYRLY+ + Y +E N
Sbjct: 697 GFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTV 756
Query: 633 PEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELT 692
PEI+R +L VL + +LG+ N+ +FDF+D P PS E I++L L + N + ELT
Sbjct: 757 PEIQRTNLASVVLSLKSLGIHNLLNFDFMDPP-PS--EALIKSLELLFALGALNQLGELT 813
Query: 693 REGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQRSDCH 752
+ GR + + ++P L K+I+ K+ E I++A++++ SIF R DKQ +
Sbjct: 814 KAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYR---PKDKQVHADN 870
Query: 753 KVQFCH--RDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXXX 810
++ H GD L +Y W+ T +WC+EN I +SM+R D
Sbjct: 871 AMKNFHVGNVGDHIAFLKIYNSWKE--TNYSTQWCYENYIQVRSMKRARDIRDQLEGLLE 928
Query: 811 XXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLH 870
+ + D +++K I++ + A Y + + V +H
Sbjct: 929 RVEIDVSSNANELD---------SIRKSIVAGFFPHTAKLQKNG--SYRTVKHPQTVHIH 977
Query: 871 PSCSLLVFAERPGWVVFGELLSVSNEYLVCVSAF 904
P+ L P WVV+ +L+ S EY+ V+
Sbjct: 978 PASGLSQVL--PRWVVYHQLVLTSKEYMRQVTEL 1009
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 301 bits (770), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 211/646 (32%), Positives = 320/646 (49%), Gaps = 47/646 (7%)
Query: 287 YRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIVGAECIVCTQPRKIAAKSLTQR 346
+ I+ + ++V+IGETGSGKSTQL Q L G + I TQPR++AA S+ +R
Sbjct: 9 FEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAVSVARR 68
Query: 347 VQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDEA 405
V +E G++ Y++ F +RI ++TD LL+ +S+ L S I++DEA
Sbjct: 69 VAQELDVPLGEDV--GYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIILDEA 126
Query: 406 HERSXXXXXXXXXXXXXXGRRV-KLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEV 464
HERS R +V+I SAT D +++S++F C + V G+ +PVE+
Sbjct: 127 HERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPVEI 186
Query: 465 RYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWAC----ENFA 520
Y+ ++A +IH RE EG IL F+T Q ++E E
Sbjct: 187 LYS--------KERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVR 238
Query: 521 ALA------AVALPLHGKLSSEEQFHVFQSFPGK-RKVIFSTNLAETSLTIPGVKYVIDS 573
+LA A+ PLHG L E Q VF P R+ I STN+AETSLT+ GV YVIDS
Sbjct: 239 SLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDS 298
Query: 574 GLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQSMELNQE- 632
G VK +++PSSGM L V ISK A+QRAGRAGRT PGKCYRLY A Y+ L+
Sbjct: 299 GYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATI 358
Query: 633 PEIRRVHLGVAVLRILALGVKNVQ--DFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHE 690
PEI+R L +VL + +L + ++ FDF+DAPS S+E A++ L +D I N +
Sbjct: 359 PEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAI-- 416
Query: 691 LTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQRSD 750
TR GR + L +EP L + ++ + + + + ++++ +++ +K+R
Sbjct: 417 -TRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKH 475
Query: 751 CHKVQFCHRD--GDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXX 808
+ GD LL ++ W+ T WC EN + + M D
Sbjct: 476 DEDSNLPNGSGYGDHIQLLQIFESWDR--TNYDPVWCKENGMQVRGMVFVKDVRRQLCQI 533
Query: 809 XXXXXXXXTPSNWRWDPYKPSFHDT--NMKKVI----LSSLAENVATYSGCNQLGYEVAQ 862
D K S D ++K + + +AE + ++G L ++
Sbjct: 534 MQKISKDRLEVG--ADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQ--- 588
Query: 863 TGRCVQLHPSCSLLVFAE--RPGWVVFGELLSVSNEYLVCVSAFDF 906
+ VQ+HPS L + P +VV+ EL+S + ++ V A D
Sbjct: 589 -SQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDM 633
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 207/648 (31%), Positives = 321/648 (49%), Gaps = 65/648 (10%)
Query: 285 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIV-GAECIVCTQPRKIAAKSL 343
Y YR +IL + +++GETGSGK+TQ+ Q+L ++G G I CTQPR++A +++
Sbjct: 51 YKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQAV 110
Query: 344 TQRVQEESSGCYGDNAIKCYSMFSSSHKFD--SRITFMTDHCLLQHCMSDKNLFGVSCIV 401
+ RV EE G+ Y++ H + + F+TD L++ M D L S I+
Sbjct: 111 SARVAEEMGVNLGEEV--GYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIM 168
Query: 402 IDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCC----------- 450
IDEAHERS RR +LR+II SAT +AK +S++F
Sbjct: 169 IDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRHAPEGSTP 228
Query: 451 ------GIFGVRGRKFPVEVRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILA 504
I V GR F V++ Y I++RE G +L
Sbjct: 229 GPKLEPAILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILL--------INEREPPGDVLV 280
Query: 505 FLTSQAEVEWACENFAALA---------AVALPLHGKLSSEEQFHVFQSFP-GKRKVIFS 554
FLT Q ++E A + A + LPL+ LS EQ +F P GKRKVI S
Sbjct: 281 FLTGQEDIETAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILS 340
Query: 555 TNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGK 614
TN+AETSLT+ GV YVIDSG K ++P S + L V+ ISK+SA QR+GRAGR PGK
Sbjct: 341 TNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGK 400
Query: 615 CYRLYSEADYQSMELNQE--PEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMA 672
CYRLY+E DY ++ E PE++R +L V+++ ALG+ N+ FD+ P+P S E
Sbjct: 401 CYRLYTE-DYFLNQMPGEGIPEMQRSNLVSTVIQLKALGIDNILGFDW---PAPPSSEAM 456
Query: 673 IRNLIQLDVIKLNNNVHELTR-EGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMT 731
IR L L +++ ++ +LT G + +L ++P + K+IL + E I +A++++
Sbjct: 457 IRALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLS 516
Query: 732 NASS-IFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSI 790
S I R G ++ D K++F +GD T L+VY + L +++ +WC++N +
Sbjct: 517 VQSVWIIAR----GVQKEQDEAKLRFAAAEGDHVTFLNVYKGF--LESKKPTQWCYKNFL 570
Query: 791 NAKSMRRCHDTYXXXXXXXXXXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATY 850
N +SM++ + + + ++K + + N
Sbjct: 571 NYQSMKKVVEIRDQLKRIARRLGITLKSCDGDMEA---------VRKAVTAGFFANACRL 621
Query: 851 SGCNQLGYEVAQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYL 898
+ Y+ + V +HPS L F P WVV+ ++S +Y+
Sbjct: 622 EPHSNGVYKTIRGSEEVYIHPSSVL--FRVNPKWVVYQSIVSTERQYM 667
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 290 bits (741), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 193/642 (30%), Positives = 315/642 (49%), Gaps = 57/642 (8%)
Query: 288 RRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIVGAEC--------IVCTQPRKIA 339
+ + L+ ++ Q ++L+GETGSGK+TQ+ QF+ D+ V AE + CTQPR++A
Sbjct: 67 KEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDA--VDAETSDKRRKWLVGCTQPRRVA 124
Query: 340 AKSLTQRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVS 398
A S+++RV EE G+ YS+ F + + ++TD LL+ M+D L
Sbjct: 125 AMSVSRRVAEEMDVTIGEEV--GYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLERYK 182
Query: 399 CIVIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGR 458
I++DEAHER+ R L++++MSAT +A++ DYF + V GR
Sbjct: 183 VIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGR 242
Query: 459 KFPVEVRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACEN 518
PVE+ Y R +IH E G IL FLT + E+E AC
Sbjct: 243 LHPVEIFYT--------QEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRK 294
Query: 519 FAALAA---------VALPLHGKLSSEEQFHVF--------QSFPGKRKVIFSTNLAETS 561
+PL+ L Q +F + P RK++ STN+AETS
Sbjct: 295 INKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETS 354
Query: 562 LTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSE 621
LTI G+ YVID G K ++P + L VS ISK+SA QR+GRAGRT PGKC+RLY+E
Sbjct: 355 LTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTE 414
Query: 622 ADYQS-MELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLD 680
+ + ++ PEI R +L VL + LG+ ++ FDF+D P+P ++ A+ L L
Sbjct: 415 KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLG 474
Query: 681 VIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRV 740
+ + N LT+ G + + ++P++ K+++ + N E ++++++++ + C +
Sbjct: 475 ALDDDGN---LTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPN---CFI 528
Query: 741 GNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHD 800
++ +D K +F H +GD TLL+VY ++ WC+EN IN ++M+ +
Sbjct: 529 RPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQ--NNEDPNWCYENFINNRAMKSADN 586
Query: 801 TYXXXXXXXXXXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEV 860
+++ Y N++K +L+ VA Y
Sbjct: 587 VRQQLVRIMSRFNLKMCSTDFNSRDYY-----INIRKAMLAGYFMQVAHLERTGH--YLT 639
Query: 861 AQTGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVS 902
+ + V LHPS L +P WV++ E + S ++ V+
Sbjct: 640 VKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVT 678
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 288 bits (738), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 214/689 (31%), Positives = 325/689 (47%), Gaps = 111/689 (16%)
Query: 291 ILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIV-GAECIVCTQPRKIAAKSLTQRVQE 349
++ ++ I++++GETGSGK+TQL QFL ++G + I TQPR+IAA ++ +RV E
Sbjct: 50 LVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAE 109
Query: 350 ESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDEAHER 408
E G YS+ F + +R+ +MTD LL+ + D +L S I++DEAH+R
Sbjct: 110 ECEVQLGQKV--GYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAHDR 167
Query: 409 SXXXXXXXXXXXXXX----------------------------------------GRRVK 428
S GR++
Sbjct: 168 SVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQNGVLKGYQGRKLS 227
Query: 429 -LRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEVRYAPSDTGXXXXXXXXXXXXXXX 487
L++IIMSA+ DA+ S+YF V+GR+FPV++ Y
Sbjct: 228 PLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIF---- 283
Query: 488 RMATEIHKREKEGTILAFLTSQAEVEWA-------CENFAALAAVALPL--HGKLSSEEQ 538
+IH EK G IL FLT Q E+E +N LPL L SE+Q
Sbjct: 284 ----QIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQ 339
Query: 539 FHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISK 597
VF P G RKVI +TN+AETS+TIPG++YVID G VK +DPS GM L V SK
Sbjct: 340 MKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASK 399
Query: 598 SSADQRAGRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQD 657
+ QR+GRAGR PGK +RLY E +++ +E + +PEI+R +L +L++ ALG+ ++
Sbjct: 400 AQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVG 459
Query: 658 FDFVDAPSPSSIEMAIRNLIQLDVI----KLNNNVHELTREGRDLVKLGIEPRLGKLILG 713
FDF+D PS +I A+ L L + KL N V G + +L +EP K ++
Sbjct: 460 FDFIDKPSRGAIIKALAELHSLGALADDGKLENPV------GYQMSRLPLEPVYSKALIL 513
Query: 714 CRKHNLFREGIALASLMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEW 773
+ N E + ++++ SIF + ++ R+ K F +GD T LSVY E
Sbjct: 514 ANQFNCLEEMLITVAVLS-VESIFYDPREKREEARTS--KNHFASVEGDHLTYLSVYRES 570
Query: 774 EALPTERK------------NKWCWENSINAKSMRRCHDTYXXXXXXXXXXXXXXTPSNW 821
+ +RK KWC EN +N++S++ D Y
Sbjct: 571 DEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYR----------------QI 614
Query: 822 RWDPYKPSFHDTNMKKVILS---SLAENVATYSGCNQLG--YEVAQTGRCVQLHPSCSLL 876
R + F+ ++ +L+ LA + + QL Y ++G V +HP+ L
Sbjct: 615 REHVEQIGFNVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVL- 673
Query: 877 VFAERPGWVVFGELLSVSNEYLVCVSAFD 905
F +P V+F EL+ S +Y+ ++ D
Sbjct: 674 -FRAKPECVIFNELMQTSKKYIKNLTIID 701
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 288 bits (737), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 191/640 (29%), Positives = 315/640 (49%), Gaps = 53/640 (8%)
Query: 288 RRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIV-----GAECIV-CTQPRKIAAK 341
+ D L ++ Q ++L+GETGSGK+TQ+ QF+ D+ + G + +V CTQPR++AA
Sbjct: 71 KDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAM 130
Query: 342 SLTQRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCI 400
S+++RV +E G+ YS+ F + + ++TD LL+ M+D L I
Sbjct: 131 SVSRRVADEMDVSIGEEV--GYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVI 188
Query: 401 VIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKF 460
++DEAHER+ R L++++MSAT +A++ +YF + V GR
Sbjct: 189 ILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLH 248
Query: 461 PVEVRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACENFA 520
PVE+ Y R +IH E G IL FLT + E+E AC
Sbjct: 249 PVEIFYT--------QEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKIN 300
Query: 521 ALAA---------VALPLHGKLSSEEQFHVF--------QSFPGKRKVIFSTNLAETSLT 563
+ +PL+ L Q +F + P RK++ STN+AETSLT
Sbjct: 301 KEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLT 360
Query: 564 IPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEAD 623
I G+ YVID G K ++P + L VS ISK+SA QR+GRAGRT PGKC+RLY+E
Sbjct: 361 IDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKS 420
Query: 624 YQS-MELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVI 682
+ + ++ PEI R +L VL + LG+ ++ FDF+D P+P ++ A+ L L +
Sbjct: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGAL 480
Query: 683 KLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGN 742
N LT+ G + + ++P++ K+++ + N E ++++++++ + C V
Sbjct: 481 DDEGN---LTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPN---CFVRP 534
Query: 743 EGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTY 802
++ +D K +F H DGD TLL+VY ++ WC+EN +N ++M+ +
Sbjct: 535 REAQKAADEAKARFGHIDGDHLTLLNVYHAYKQ--NNEDPNWCFENFVNNRAMKSADNVR 592
Query: 803 XXXXXXXXXXXXXXTPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQ 862
+++ Y N++K +L+ VA Y +
Sbjct: 593 QQLVRIMSRFNLKMCSTDFNSRDYY-----VNIRKAMLAGYFMQVAHLERTGH--YLTVK 645
Query: 863 TGRCVQLHPSCSLLVFAERPGWVVFGELLSVSNEYLVCVS 902
+ V LHPS L +P WV++ E + + ++ V+
Sbjct: 646 DNQVVHLHPSNCL---DHKPEWVIYNEYVLTTRNFIRTVT 682
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 233/425 (54%), Gaps = 31/425 (7%)
Query: 285 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIVGAECIVCTQPRKIAAKSLT 344
+ YR ++L+ I Q++V++GETGSGK+TQ+ Q+L ++G I CTQPR++AA S+
Sbjct: 218 HGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAMSVA 277
Query: 345 QRVQEESSGCYGDNAIKCYSM-FSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVID 403
RV +E G YS+ F + I +MTD LL+ + + L S I+ID
Sbjct: 278 SRVAQEVGVKLGHEV--GYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIID 335
Query: 404 EAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVE 463
EAHER+ R LR+II SAT +AK+ S+YF I+ + GR++PVE
Sbjct: 336 EAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVE 395
Query: 464 --VRYAPSDTGXXXXXXXXXXXXXXXRMATEIHKREKEGTILAFLTSQAEVEWACENFA- 520
R P R +IH+ E G IL FLT Q E+E N
Sbjct: 396 KLFRKCPEP----------DYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKR 445
Query: 521 --------ALAAVALPLHGKLSSEEQFHVFQSFP-GKRKVIFSTNLAETSLTIPGVKYVI 571
+ P++ L + Q VF+ P G RKV+ +TN+AETSLTI GVKYVI
Sbjct: 446 RMMDLGTKGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVI 505
Query: 572 DSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQSMELNQ 631
D G K + ++P +GM L V+ ISK+SA QRAGR+GRT PGKC+RLY+ D + +
Sbjct: 506 DPGYCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYNIKDLEPTTI-- 563
Query: 632 EPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHEL 691
PEI+R +L VL + +LG+++V +FDF+D P +++ A+ L L + + + E+
Sbjct: 564 -PEIQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALLKALELLYALGAL---DEIGEI 619
Query: 692 TREGR 696
T+ R
Sbjct: 620 TKGTR 624
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 221/492 (44%), Gaps = 59/492 (11%)
Query: 286 AYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIVGAECIVCTQPRKIAAKSLTQ 345
A +R I+ +I ++ +++GE G GKS+Q+ QFL ++ + I+CTQPR+ A ++ +
Sbjct: 30 AMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAP---ILCTQPRRFAVVAVAK 86
Query: 346 RVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDK--NLFGVSCIVID 403
V + + G I + S S+I F T LL M DK N I++D
Sbjct: 87 MVAKSRNSDLG-GEIGYHIGHSKILTEGSKILFKTAGVLLDE-MLDKGLNALKYKVIILD 144
Query: 404 EAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVE 463
E HERS + LRV++MSATAD + DYF G RG + VE
Sbjct: 145 EVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKELG----RGER--VE 198
Query: 464 VRYAPSD-------------------TGXXXXXXXXXXXXXXXRMATEI----------- 493
V PS G TEI
Sbjct: 199 VVAIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSPSSADTEIKPELQNLIHDL 258
Query: 494 ----HKREK--EGTILAFLTSQAEVEWA---CENFAALAAVALPLHGKLSSEEQFHVFQS 544
H++E E +IL FL + +E E F A V + LH + +E+ +
Sbjct: 259 ILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFFASFEVHI-LHRSIDTEQALAAMKI 317
Query: 545 FPGKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRA 604
+RKVI +TN+AE+S+TIP V YVIDS +DPS + +++ W+S+S A+QR
Sbjct: 318 CRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRR 377
Query: 605 GRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAP 664
GR GRT G+ YRL A + +E ++ P I ++ L VL I + + D + + A
Sbjct: 378 GRTGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAINDANALLAK 437
Query: 665 S-----PSSIEMAIRNLIQLDVI-KLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHN 718
+ P ++ A+R L+ + + K +E T GR L + L++ +
Sbjct: 438 AMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFPLSFDASILVVKFGEMG 497
Query: 719 LFREGIALASLM 730
+ R+GI L LM
Sbjct: 498 MLRQGILLGVLM 509
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 16/319 (5%)
Query: 493 IHKREKEGTILAFLTSQAEVEWACE-----NFAALAA--VALPLHGKLSSEEQFHVF-QS 544
I + E G IL FLT E+ E NF ++ + LPLHG + + Q +F +
Sbjct: 497 ICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRP 556
Query: 545 FPGKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRA 604
P KRK++ +TN+AE+S+TI V YV+D G K++ +D + + L SWISK+SA QR
Sbjct: 557 PPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRR 616
Query: 605 GRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAP 664
GRAGR + G CYRLY + Y + Q PEI R L L I +L V ++ F A
Sbjct: 617 GRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSF-LAKAL 675
Query: 665 SPSSIEMAIRNLIQ-LDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREG 723
P +A+ N I+ L I N+V ELT GR L L ++P +GK++L
Sbjct: 676 QPPD-ALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPA 734
Query: 724 IALASLMTNASSIFCRVGNEGDKQRSDCHKVQFCHRD-GDLFTLLSVYMEW-EALPTERK 781
+ +A+ + S + K+ +D K F D LL Y + +A +
Sbjct: 735 LTIAAALAYRSPFVLPLNR---KEEADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGGNE 791
Query: 782 NKWCWENSINAKSMRRCHD 800
+CW+N ++ ++R D
Sbjct: 792 KDFCWQNFLSPVTLRMMED 810
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 97/183 (53%), Gaps = 7/183 (3%)
Query: 285 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLAD---SGIVGAEC-IVCTQPRKIAA 340
+ + + L + Q++V+ GETG GK+TQL QF+ + S + GA+C I+CTQPR+I+A
Sbjct: 231 FKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISA 290
Query: 341 KSLTQRVQEESSGCYGDNAIKCYSMFSSSHKFD-SRITFMTDHCLLQHCMSDKNLFGVSC 399
S+ R+ E G++ Y + S + D +R+ F T LL+ + D NL VS
Sbjct: 291 ISVASRISAERGESIGESV--GYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSH 348
Query: 400 IVIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRK 459
+++DE HER RR LR+I+MSAT +A S YF + G
Sbjct: 349 LLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFT 408
Query: 460 FPV 462
FPV
Sbjct: 409 FPV 411
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 143 bits (361), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 5/204 (2%)
Query: 511 EVEWACENFAALAAVALPLHGKLSSEEQFHVFQSFPGK-RKVIFSTNLAETSLTIPGVKY 569
E E F+ LPL+ LS Q VF+ + R V+ +TN+AETSLTIPG+KY
Sbjct: 634 EAEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKY 693
Query: 570 VIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGRTEPGKCYRLYSEADYQSM-E 628
V+D+G VK +D +GM +V WIS++SA QRAGRAGRT PG CYRLYS A + ++ E
Sbjct: 694 VVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFE 753
Query: 629 LNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNV 688
+ PEI +V + +L + ++ + V++F F P PS+I A R L L+ + N
Sbjct: 754 ESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGG- 812
Query: 689 HELTREGRDLVKLGIEPRLGKLIL 712
LT G+ + + PR +++L
Sbjct: 813 --LTPLGKAMSHYPMSPRHSRMLL 834
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 47/267 (17%)
Query: 289 RDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIVGAE------CIVCTQPRKIAAKS 342
++I+ I+ +++ G+TG GK+TQ+ QFL ++G + I TQPR++A +
Sbjct: 248 QEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGITQPRRVAVLA 307
Query: 343 LTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVI 402
+RV E G + + +S I FMTD LL+ +D L S I++
Sbjct: 308 TAKRVAFEL-GVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFLLRRYSVIIL 366
Query: 403 DEAHERSXXXXXXXXXXXXXXGRR-----------------------VKLRVIIMSATAD 439
DEAHERS R L++I+MSAT
Sbjct: 367 DEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITPLKLILMSATL- 425
Query: 440 AKQLSDYFYCCGIF-------GVRGRKFPVEVRYAPSDTGXXXXXXXXXXXXXXXRMATE 492
++ D+ +F V R++PV + ++ +
Sbjct: 426 --RVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFS-------KKTEIVDYIGEAYKKVMS 476
Query: 493 IHKREKEGTILAFLTSQAEVEWACENF 519
IHK+ +G IL F+T Q EV++ CE
Sbjct: 477 IHKKLPQGGILVFVTGQREVDYLCEKL 503
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 157/322 (48%), Gaps = 31/322 (9%)
Query: 493 IHKREKEGTILAFLTSQAEVEWACENFAALA-------AVALPLHGKLSSEEQFHVFQS- 544
I + E G IL FLT ++ E + L HG + + EQ +F+
Sbjct: 492 ICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEP 551
Query: 545 FPGKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRA 604
G RK++ +TN+AETS+TI V +VID G K++ +D + L SWISK SA QR
Sbjct: 552 ASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRR 611
Query: 605 GRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAP 664
GRAGR PG+CY LY + Y + Q PEI R L L+I +L + ++ +F
Sbjct: 612 GRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQ 671
Query: 665 SPSSIEMAIRNLIQ-LDVIKLNNNVHELTREGRDLVKLGIEPRLGKL-----ILGCRKHN 718
SP +A++ I L +I + +LT GR L KL +EP+LGK+ ILGC
Sbjct: 672 SPEL--LAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGC---- 725
Query: 719 LFREGIALASLMTNASSIFCR---VGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEA 775
L ++T A+ + R + + K ++ K QF D L+ Y W+
Sbjct: 726 -------LDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKK 778
Query: 776 LPTERK-NKWCWENSINAKSMR 796
E +CW+N ++ +S+R
Sbjct: 779 AEEESAVYDYCWKNFLSIQSLR 800
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 100/182 (54%), Gaps = 5/182 (2%)
Query: 285 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIV---GA-ECIVCTQPRKIAA 340
+ R +L I Q++V+ GETG GK+TQ+ QF+ +S I GA I+CTQPR+I+A
Sbjct: 223 FKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRRISA 282
Query: 341 KSLTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCI 400
S+++RV E G+ ++ D+R+ F T LL+ + D+NL GV+ +
Sbjct: 283 MSVSERVAYERGEQLGE-SVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTHV 341
Query: 401 VIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKF 460
++DE HER RR +L++I+MSAT DA+ S YF G+ + G +
Sbjct: 342 IVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIPGFTY 401
Query: 461 PV 462
PV
Sbjct: 402 PV 403
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 157/313 (50%), Gaps = 25/313 (7%)
Query: 488 RMATEIHKREKEGTILAFLTSQAEVEWACEN-----FAALAA--VALPLHGKLSSEEQFH 540
++ +I K+G IL FL E+ E F A +A + L LH ++ +EEQ
Sbjct: 564 KLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKK 623
Query: 541 VFQSFP-GKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSS 599
VF P G RK++ +TN+AE+++TI V YVIDSG +K+ +DP + ++ L+ SW+SK++
Sbjct: 624 VFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKAN 683
Query: 600 ADQRAGRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVK-NVQDF 658
A QRAGRAGR + G CY LYS+ S+ + PE+ R+ + L++ L NV DF
Sbjct: 684 AKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDF 743
Query: 659 --DFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRK 716
+D P SIE A LI L I ELT G+ +L + PR+ K+I
Sbjct: 744 LQKLMDPPVAQSIENA---LIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAIL 800
Query: 717 HNLFREGIALASLMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDGDLFTLLSVYMEWEAL 776
N + LA + F + GD++++ K + GD L+ ++
Sbjct: 801 VNCLDPALILA-CAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQ-- 857
Query: 777 PTERKNKWCWENS 789
CW+N+
Sbjct: 858 --------CWKNA 862
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 7/183 (3%)
Query: 286 AYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADS---GIVGAECIVCTQPRKIAAKS 342
++R I+ + Q++++ GETG GK+TQ+ Q+L D A I+CTQPR+I+A S
Sbjct: 221 SFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPRRISAIS 280
Query: 343 LTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMS---DKNLFGVSC 399
++ R+ E G + S +S + F T+ LL+ + + ++ ++
Sbjct: 281 VSDRISWERGETIG-RTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSSVPDITH 339
Query: 400 IVIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRK 459
I++DE HER LR+I+MSAT DA++ S+YF C + V G
Sbjct: 340 IIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFT 399
Query: 460 FPV 462
+PV
Sbjct: 400 YPV 402
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 159/324 (49%), Gaps = 28/324 (8%)
Query: 498 KEGTILAFLTSQAEVEWACENFAALAAV-------ALPLHGKLSSEEQFHVFQSFP-GKR 549
+EG IL FL +E+ AA LPLH ++S EQ VF P G R
Sbjct: 881 EEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIR 940
Query: 550 KVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGR 609
KVI +TN+AETS+TI V YVIDSG K++R++P ++ + W+SK++A QR GRAGR
Sbjct: 941 KVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGR 1000
Query: 610 TEPGKCYRLYSEADYQS-MELNQEPEIRRVHLGVAVLRILALGVKNVQDF--DFVDAPSP 666
+PG C+ LY+ ++ M Q PE+ RV L L I LG+ ++ F ++ PS
Sbjct: 1001 VKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSE 1060
Query: 667 SSIEMAIRNLIQLDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIAL 726
S+I AI L ++ ++ + ELT G L KL ++ +GK++L +++
Sbjct: 1061 SAINSAILLLHKVGALEGD---EELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSI 1117
Query: 727 ASLMTNASSIFCRVGNEGDKQR----------SDCHKVQFCHRDGDLFTLLSVYMEWEAL 776
A+ ++ S F +E + R + R D ++ Y +W +
Sbjct: 1118 AAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVAYEKWVRI 1177
Query: 777 PTERKNK----WCWENSINAKSMR 796
E+ K +C +N+ MR
Sbjct: 1178 LHEQGFKAAESFCESKFLNSSVMR 1201
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 104/194 (53%), Gaps = 20/194 (10%)
Query: 288 RRDILRQIHYQQIMVLIGETGSGKSTQLVQF----LADSGIVGAECIVCTQPRKIAAKSL 343
++DIL+++ + ++V+ GETGSGK+TQ+ QF + DSG G I+CTQPR I ++
Sbjct: 603 KKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRAI---TV 659
Query: 344 TQRVQEESSGCYG----DNAIKCYSMFSSSHKFD-SRITFMTDHCLLQHCMSDKNLFGVS 398
QRV +E C DN++ Y + + + D +R+ F T LL+ + D L V+
Sbjct: 660 AQRVADER--CEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTTLKDVT 717
Query: 399 CIVIDEAHERSXXXXXXXXXXXXXXGRRV------KLRVIIMSATADAKQLSDYFYCCGI 452
I++DE HERS ++ KL+VI+MSAT DA Q S YF C I
Sbjct: 718 HIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPI 777
Query: 453 FGVRGRKFPVEVRY 466
+GR PV +
Sbjct: 778 ITAQGRTHPVTTYF 791
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 210/471 (44%), Gaps = 70/471 (14%)
Query: 498 KEGTILAFLTSQAEVEWACENFAA-------LAAVALPLHGKLSSEEQFHVFQSFP-GKR 549
+EG IL FL AE+ + AA A LPLH ++S EQ VF P G R
Sbjct: 914 EEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLR 973
Query: 550 KVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGR 609
KVI +TN+AETS+TI V YVIDSG K++R++P ++ + WIS+++A QR GRAGR
Sbjct: 974 KVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGR 1033
Query: 610 TEPGKCYRLYSEADYQS-MELNQEPEIRRVHLGVAVLRILALGVKNVQDF--DFVDAPSP 666
+PG C+ LY+ ++ M Q PE+ R+ L L+I LG+ +++ F ++ PS
Sbjct: 1034 VKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPPSE 1093
Query: 667 SSIEMAIRNLIQLDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIAL 726
++ AI L ++ ++ + ELT G L KL ++ +GK++L +++
Sbjct: 1094 GAMTSAISLLHEVGAVEGD---EELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSI 1150
Query: 727 ASLMTNASSIFCRVGNEGDKQRSDCHKVQFCHRDG-------------DLFTLLSVYMEW 773
A+ ++ S + + +KQ D K+ +G D ++ Y +W
Sbjct: 1151 AAFLSYKSPF---IYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKW 1207
Query: 774 EALPTERKNK----WCWENSINAKSMRRCHDTYXXXXXXXXXXXXXXTPSN--------- 820
+ ER K +C +++ MR D P
Sbjct: 1208 VKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKE 1267
Query: 821 ----WRWDPYKP----SFHDTNMKKVILSSLAENVA------TYSGCNQLGYEVAQTG-- 864
W DP +P S +K ++ + L N+A T + N L + QT
Sbjct: 1268 NLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSY 1327
Query: 865 -------RCVQLHPSCSLLVF-AERPGWVVFGELLSVSNEYL---VCVSAF 904
R V +HPS F A + ++VF E + + YL VS F
Sbjct: 1328 SAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSPF 1378
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 100/192 (52%), Gaps = 13/192 (6%)
Query: 288 RRDILRQIHYQQIMVLIGETGSGKSTQLVQF----LADSGIVGAECIVCTQPRKIAAKSL 343
+ IL+ + + ++V+ GETGSGK+TQ+ QF + DSG G I+CTQPR+IAA S+
Sbjct: 620 KNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISV 679
Query: 344 TQRVQEE---SSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCI 400
QRV +E SS D+ + S+ +R+ F T LL+ D+ L V+ I
Sbjct: 680 AQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTHI 739
Query: 401 VIDEAHERSXXXXXXXXXXXXXXGRRV------KLRVIIMSATADAKQLSDYFYCCGIFG 454
++DE HERS ++ KL+VI+MSAT DA S YF C +
Sbjct: 740 IVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVIT 799
Query: 455 VRGRKFPVEVRY 466
+GR PV +
Sbjct: 800 AQGRTHPVTTHF 811
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 169/319 (52%), Gaps = 24/319 (7%)
Query: 493 IHKREKEGTILAFLTSQAEVEWACENFAALAAVALP-------LHGKLSSEEQFHVFQSF 545
I K E+ G +L F+T ++ A + + P HG ++S EQ +F
Sbjct: 572 IVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRP 631
Query: 546 P-GKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRA 604
P G RK++ +TN+AETS+TI V YVID G K++ +D + L SWISK++A QR
Sbjct: 632 PEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRR 691
Query: 605 GRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAP 664
GRAGR PG+CY LY Y++ Q+PE+ R L L+I +LG+ ++ +F
Sbjct: 692 GRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQ 751
Query: 665 SPSSIEMAIRNLIQ-LDVIKLNNNVHELTREGRDLVKLGIEPRLGK-LILGCRKHNLFRE 722
P + ++++N ++ L +I ++ LT G++L L +EP+LGK LILG +F
Sbjct: 752 PPEA--LSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGA----IFN- 804
Query: 723 GIALASLMTNASSIFCR---VGNEGDKQRSDCHKVQFCHRD-GDLFTLLSVYMEW-EALP 777
L +MT + + R + K ++ + +F RD D TL+ Y W +A
Sbjct: 805 --CLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAER 862
Query: 778 TERKNKWCWENSINAKSMR 796
T +CW+N +++++++
Sbjct: 863 THSGYDYCWKNFLSSQTLK 881
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 5/186 (2%)
Query: 285 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIV---GAEC-IVCTQPRKIAA 340
Y + +L+ I Q++V+ GETG GK+TQL Q++ +S I GA C I+CTQPR+I+A
Sbjct: 302 YKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISA 361
Query: 341 KSLTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCI 400
S+++RV E G+ ++ D+R+ F T LL+ + D++L GV+ +
Sbjct: 362 ISVSERVAAERGEQIGE-SVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHV 420
Query: 401 VIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKF 460
V+DE HER RR L++I+MSAT +A+ S YF + G +
Sbjct: 421 VVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTY 480
Query: 461 PVEVRY 466
PV +
Sbjct: 481 PVRAHF 486
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 169/319 (52%), Gaps = 24/319 (7%)
Query: 493 IHKREKEGTILAFLTSQAEVEWACENFAALAAVALP-------LHGKLSSEEQFHVFQSF 545
I K E+ G +L F+T ++ A + + P HG ++S EQ +F
Sbjct: 572 IVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRP 631
Query: 546 P-GKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRA 604
P G RK++ +TN+AETS+TI V YVID G K++ +D + L SWISK++A QR
Sbjct: 632 PEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRR 691
Query: 605 GRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAP 664
GRAGR PG+CY LY Y++ Q+PE+ R L L+I +LG+ ++ +F
Sbjct: 692 GRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQ 751
Query: 665 SPSSIEMAIRNLIQ-LDVIKLNNNVHELTREGRDLVKLGIEPRLGK-LILGCRKHNLFRE 722
P + ++++N ++ L +I ++ LT G++L L +EP+LGK LILG +F
Sbjct: 752 PPEA--LSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGA----IFN- 804
Query: 723 GIALASLMTNASSIFCR---VGNEGDKQRSDCHKVQFCHRD-GDLFTLLSVYMEW-EALP 777
L +MT + + R + K ++ + +F RD D TL+ Y W +A
Sbjct: 805 --CLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAER 862
Query: 778 TERKNKWCWENSINAKSMR 796
T +CW+N +++++++
Sbjct: 863 THSGYDYCWKNFLSSQTLK 881
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 100/186 (53%), Gaps = 5/186 (2%)
Query: 285 YAYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIV---GAEC-IVCTQPRKIAA 340
Y + +L+ I Q++V+ GETG GK+TQL Q++ +S I GA C I+CTQPR+I+A
Sbjct: 302 YKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRISA 361
Query: 341 KSLTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCI 400
S+++RV E G+ ++ D+R+ F T LL+ + D++L GV+ +
Sbjct: 362 ISVSERVAAERGEQIGE-SVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHV 420
Query: 401 VIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKF 460
V+DE HER RR L++I+MSAT +A+ S YF + G +
Sbjct: 421 VVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTY 480
Query: 461 PVEVRY 466
PV +
Sbjct: 481 PVRAHF 486
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 167/322 (51%), Gaps = 24/322 (7%)
Query: 493 IHKREKEGTILAFLTSQAEVEWACENFAALAAVALP-------LHGKLSSEEQFHVFQ-S 544
I ++E+ G +L FLT ++ + A + P HG +++ EQ +F+ +
Sbjct: 533 ICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERA 592
Query: 545 FPGKRKVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRA 604
P RK++ +TN+AE S+TI V +V+D G K++ +D + L SWIS++SA QR
Sbjct: 593 PPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRR 652
Query: 605 GRAGRTEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDFVDAP 664
GRAGR PG+CY LY + Y + Q PE+ R L L+I +L V+++ +F
Sbjct: 653 GRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQ 712
Query: 665 SPSSIEMAIRNLIQ-LDVIKLNNNVHELTREGRDLVKLGIEPRLGK-LILGCRKHNLFRE 722
+P S +A++N I L +I + LT G+ L L ++P+LGK LI+G +FR
Sbjct: 713 APES--LAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGA----IFR- 765
Query: 723 GIALASLMTNASSIFCR---VGNEGDKQRSDCHKVQFCHRD-GDLFTLLSVYMEWEALPT 778
++T S + R + + K + K++F +D D L+ + W+
Sbjct: 766 --CFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWKDAER 823
Query: 779 E-RKNKWCWENSINAKSMRRCH 799
E ++CW N ++A++++ H
Sbjct: 824 EGSAYEFCWRNFLSAQTLQAIH 845
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 97/180 (53%), Gaps = 5/180 (2%)
Query: 291 ILRQIHYQQIMVLIGETGSGKSTQLVQFLADSGIV---GAEC-IVCTQPRKIAAKSLTQR 346
+L+ I Q++V+ GETG GK+TQL Q++ +S I GA C I+CTQPR+I+A ++++R
Sbjct: 269 LLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSER 328
Query: 347 VQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVSCIVIDEAH 406
V E G+ + ++ + F T LL+ +SD+NL GV+ + +DE H
Sbjct: 329 VSAERGEPLGE-TVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIH 387
Query: 407 ERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRKFPVEVRY 466
ER RR LR+++MSAT +A+ S+Y+ + G PV+ +
Sbjct: 388 ERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHF 447
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 126/242 (52%), Gaps = 16/242 (6%)
Query: 498 KEGTILAFLTSQAEV----EWACEN--FAALAAVALP-LHGKLSSEEQFHVF-QSFPGKR 549
++G IL FL ++ + EN FA A + LH + + EQ VF + PG R
Sbjct: 550 EDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCR 609
Query: 550 KVIFSTNLAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVSWISKSSADQRAGRAGR 609
K++ +TN+AE+++TI V YVIDSG +K+ +DP + ++ L+ SW+SK++A QR GRAGR
Sbjct: 610 KIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGR 669
Query: 610 TEPGKCYRLYSEADYQSMELNQEPEIRRVHLGVAVLRILALGVKNVQDFDF----VDAPS 665
+PG CY LYS SM + PEI+R+ + L++ L N + DF +D P
Sbjct: 670 CQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILD-PNCKTNDFLQKLLDPPV 728
Query: 666 PSSIEMAIRNLIQLDVIKLNNNVHELTREGRDLVKLGIEPRLGKLILGCRKHNLFREGIA 725
SI A+ L + + ELT G L + P + K++ N +
Sbjct: 729 DQSIANALSILQDIGALTPQ---EELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALT 785
Query: 726 LA 727
LA
Sbjct: 786 LA 787
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 7/187 (3%)
Query: 286 AYRRDILRQIHYQQIMVLIGETGSGKSTQLVQFLAD---SGIVGAECIVCTQPRKIAAKS 342
+++ I + Q++++ GETG GK+TQ+ Q+L D S IVCTQPR+I+A S
Sbjct: 191 SFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMS 250
Query: 343 LTQRVQEESSGCYGDNAIKCYSMFSSSHKFDSRITFMTDHCLLQHCMSDKNLFGVS---C 399
+++R+ E G+N I S S + F T+ LL+ + ++ VS
Sbjct: 251 VSERISCERGESIGEN-IGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVSDITH 309
Query: 400 IVIDEAHERSXXXXXXXXXXXXXXGRRVKLRVIIMSATADAKQLSDYFYCCGIFGVRGRK 459
I++DE HER LR+I+MSAT DA++ S YF C + V G
Sbjct: 310 IIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFT 369
Query: 460 FPVEVRY 466
+PV Y
Sbjct: 370 YPVRTLY 376
>AT5G14900.1 | Symbols: | helicase associated (HA2)
domain-containing protein | chr5:4822676-4823581 REVERSE
LENGTH=301
Length = 301
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 17/266 (6%)
Query: 638 VHLGVAVLRILALGVKNVQDFDFVDAPSPSSIEMAIRNLIQLDVIKLNNNVHELTREGRD 697
+L VL + L VKN+ FD +D+P+P ++ A+ +L L + + N LT+ G
Sbjct: 2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCN---LTKTGEM 58
Query: 698 LVKLGIEPRLGKLILGCRKHNLFREGIALASLMTNASSIFCRVGNEGDKQR-SDCHKVQF 756
+ + ++P++ K+++ + N E ++++++++ + C + G+ Q+ +D K F
Sbjct: 59 MSEFPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPN---CFIRPRGEAQKAADEAKSSF 115
Query: 757 CHRDGDLFTLLSVYMEWEALPTERKNKWCWENSINAKSMRRCHDTYXXXXXXXXXXXXXX 816
H DGD TLL+++ + L + WC IN ++M+
Sbjct: 116 AHIDGDHLTLLNLFHAF--LQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKL 173
Query: 817 TPSNWRWDPYKPSFHDTNMKKVILSSLAENVATYSGCNQLGYEVAQTGRCVQLHPSCSLL 876
++ Y N++K +L+ VA + + V LHPS L
Sbjct: 174 CSPDFNSRDYY-----VNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCL- 227
Query: 877 VFAERPGWVVFGELLSVSNEYLVCVS 902
+P WVV+ E + S ++ V+
Sbjct: 228 --DHKPEWVVYNEYVFTSRNFIRTVT 251