Miyakogusa Predicted Gene

Lj0g3v0238379.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0238379.1 Non Chatacterized Hit- tr|E1Z6W4|E1Z6W4_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,39.81,0.0000000000004,Tocopherol_cycl,Tocopherol
cyclase,CUFF.15628.1
         (115 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32770.1 | Symbols: VTE1, ATSDX1 | tocopherol cyclase, chloro...   181   8e-47

>AT4G32770.1 | Symbols: VTE1, ATSDX1 | tocopherol cyclase,
           chloroplast / vitamin E deficient 1 (VTE1) / sucrose
           export defective 1 (SXD1) | chr4:15804981-15807790
           FORWARD LENGTH=488
          Length = 488

 Score =  181 bits (460), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 83/115 (72%), Positives = 94/115 (81%)

Query: 1   MYSVENPAFPNPLTPLELVQYGPRFTGVGAQILGADDNYICQYTPQSNNFWGSRHELVLG 60
           MYSVENPAF   L+PLE+  YGPRFTGVGAQILGA+D Y+CQY   S+NFWG RHELVLG
Sbjct: 111 MYSVENPAFRQSLSPLEVALYGPRFTGVGAQILGANDKYLCQYEQDSHNFWGDRHELVLG 170

Query: 61  NTFVAKPNSKPPNKEVPPQEFNNRVLEGFQVTTLWNQGFICDDGRSNYVETVKTA 115
           NTF A P +K PNKEVPP+EFN RV EGFQ T  W+QG ICDDGR++Y ETVK+A
Sbjct: 171 NTFSAVPGAKAPNKEVPPEEFNRRVSEGFQATPFWHQGHICDDGRTDYAETVKSA 225