Miyakogusa Predicted Gene
- Lj0g3v0237869.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0237869.1 Non Chatacterized Hit- tr|I1MRG3|I1MRG3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52246
PE,67.12,6e-18,seg,NULL; LIN-9-RELATED,NULL; LIN-9,NULL,CUFF.15591.1
(73 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G21430.2 | Symbols: ATALY3, ALY3 | DNA binding | chr3:7544800... 67 4e-12
AT5G27610.1 | Symbols: ATALY1, ALY1 | DIRP ;Myb-like DNA-binding... 54 2e-08
AT3G05380.4 | Symbols: ALY2 | DIRP ;Myb-like DNA-binding domain ... 46 5e-06
AT3G05380.5 | Symbols: ALY2 | DIRP ;Myb-like DNA-binding domain ... 46 5e-06
AT3G05380.2 | Symbols: ALY2, ATALY2 | DIRP ;Myb-like DNA-binding... 46 5e-06
AT3G05380.1 | Symbols: ALY2, ATALY2 | DIRP ;Myb-like DNA-binding... 46 5e-06
>AT3G21430.2 | Symbols: ATALY3, ALY3 | DNA binding |
chr3:7544800-7552841 REVERSE LENGTH=1132
Length = 1132
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 7/53 (13%)
Query: 21 ASSRDKDAANVVKTRQKASAGVQKKRKLADMLGPQWSKEELERFYEAYRKYGK 73
A S KD ++ KT+Q+ KRKL+DMLGPQWSKEELERFYE YRK+GK
Sbjct: 19 AVSPHKDEESMSKTKQR-------KRKLSDMLGPQWSKEELERFYEGYRKFGK 64
>AT5G27610.1 | Symbols: ATALY1, ALY1 | DIRP ;Myb-like DNA-binding
domain | chr5:9764852-9769706 FORWARD LENGTH=971
Length = 971
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 28/34 (82%)
Query: 38 ASAGVQKKRKLADMLGPQWSKEELERFYEAYRKY 71
AS Q+K+KLAD LGPQW+K EL RFY+AYRKY
Sbjct: 27 ASKTKQRKKKLADKLGPQWTKRELVRFYDAYRKY 60
>AT3G05380.4 | Symbols: ALY2 | DIRP ;Myb-like DNA-binding domain |
chr3:1540562-1546139 FORWARD LENGTH=1052
Length = 1052
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 50 DMLGPQWSKEELERFYEAYRKYGK 73
D LGPQW++ ELERFY+AYRK+G+
Sbjct: 39 DKLGPQWTRLELERFYDAYRKHGQ 62
>AT3G05380.5 | Symbols: ALY2 | DIRP ;Myb-like DNA-binding domain |
chr3:1540562-1546139 FORWARD LENGTH=1052
Length = 1052
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 50 DMLGPQWSKEELERFYEAYRKYGK 73
D LGPQW++ ELERFY+AYRK+G+
Sbjct: 39 DKLGPQWTRLELERFYDAYRKHGQ 62
>AT3G05380.2 | Symbols: ALY2, ATALY2 | DIRP ;Myb-like DNA-binding
domain | chr3:1540562-1546139 FORWARD LENGTH=1052
Length = 1052
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 50 DMLGPQWSKEELERFYEAYRKYGK 73
D LGPQW++ ELERFY+AYRK+G+
Sbjct: 39 DKLGPQWTRLELERFYDAYRKHGQ 62
>AT3G05380.1 | Symbols: ALY2, ATALY2 | DIRP ;Myb-like DNA-binding
domain | chr3:1540562-1546139 FORWARD LENGTH=1051
Length = 1051
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 50 DMLGPQWSKEELERFYEAYRKYGK 73
D LGPQW++ ELERFY+AYRK+G+
Sbjct: 38 DKLGPQWTRLELERFYDAYRKHGQ 61