Miyakogusa Predicted Gene

Lj0g3v0237849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0237849.1 Non Chatacterized Hit- tr|I1N7F4|I1N7F4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55851 PE,93.97,0,no
description,Cytochrome c domain; no description,Cytochrome c1,
transmembrane anchor, C-terminal; ,CUFF.15723.1
         (199 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40810.1 | Symbols:  | Cytochrome C1 family | chr5:16340200-1...   333   5e-92
AT5G40810.2 | Symbols:  | Cytochrome C1 family | chr5:16340670-1...   332   8e-92
AT3G27240.1 | Symbols:  | Cytochrome C1 family | chr3:10056144-1...   330   4e-91

>AT5G40810.1 | Symbols:  | Cytochrome C1 family |
           chr5:16340200-16342327 FORWARD LENGTH=307
          Length = 307

 Score =  333 bits (854), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 173/199 (86%), Positives = 180/199 (90%)

Query: 1   MSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFSRPGKLSDRFPEPYANESAAR 60
           MSLISYRDLVGVAYTEEE KAMAAEIEVVDGPNDEGEMF+RPGKLSDR PEPY+NESAAR
Sbjct: 109 MSLISYRDLVGVAYTEEEAKAMAAEIEVVDGPNDEGEMFTRPGKLSDRLPEPYSNESAAR 168

Query: 61  FANGGAYPPDLSLITKARHNGQNYVFSLLTGYREPPAGIVIREGLHYNPYFPGGAIAMPK 120
           FANGGAYPPDLSL+TKARHNGQNYVF+LLTGYR+PPAGI IREGLHYNPYFPGGAIAMPK
Sbjct: 169 FANGGAYPPDLSLVTKARHNGQNYVFALLTGYRDPPAGISIREGLHYNPYFPGGAIAMPK 228

Query: 121 MLNDGAVEYEDGTPATESQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVXXXXXXXXXXX 180
           MLND AVEYEDGTPATE+QMGKDVVSFLSWAAEPEMEERKLMGFKWIF+           
Sbjct: 229 MLNDEAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFLLSLALLQAAYY 288

Query: 181 XXXXWSVLKSRKLVLDVVN 199
               WSVLKSRKLVLDVVN
Sbjct: 289 RRLKWSVLKSRKLVLDVVN 307


>AT5G40810.2 | Symbols:  | Cytochrome C1 family |
           chr5:16340670-16342327 FORWARD LENGTH=260
          Length = 260

 Score =  332 bits (852), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 173/199 (86%), Positives = 180/199 (90%)

Query: 1   MSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFSRPGKLSDRFPEPYANESAAR 60
           MSLISYRDLVGVAYTEEE KAMAAEIEVVDGPNDEGEMF+RPGKLSDR PEPY+NESAAR
Sbjct: 62  MSLISYRDLVGVAYTEEEAKAMAAEIEVVDGPNDEGEMFTRPGKLSDRLPEPYSNESAAR 121

Query: 61  FANGGAYPPDLSLITKARHNGQNYVFSLLTGYREPPAGIVIREGLHYNPYFPGGAIAMPK 120
           FANGGAYPPDLSL+TKARHNGQNYVF+LLTGYR+PPAGI IREGLHYNPYFPGGAIAMPK
Sbjct: 122 FANGGAYPPDLSLVTKARHNGQNYVFALLTGYRDPPAGISIREGLHYNPYFPGGAIAMPK 181

Query: 121 MLNDGAVEYEDGTPATESQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVXXXXXXXXXXX 180
           MLND AVEYEDGTPATE+QMGKDVVSFLSWAAEPEMEERKLMGFKWIF+           
Sbjct: 182 MLNDEAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFLLSLALLQAAYY 241

Query: 181 XXXXWSVLKSRKLVLDVVN 199
               WSVLKSRKLVLDVVN
Sbjct: 242 RRLKWSVLKSRKLVLDVVN 260


>AT3G27240.1 | Symbols:  | Cytochrome C1 family |
           chr3:10056144-10058370 REVERSE LENGTH=307
          Length = 307

 Score =  330 bits (846), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 171/199 (85%), Positives = 179/199 (89%)

Query: 1   MSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFSRPGKLSDRFPEPYANESAAR 60
           MSLISYRDLVGVAYTEEE KAMAAEIEVVDGPNDEGEMF+RPGKLSDRFP+PYANESAAR
Sbjct: 109 MSLISYRDLVGVAYTEEEAKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANESAAR 168

Query: 61  FANGGAYPPDLSLITKARHNGQNYVFSLLTGYREPPAGIVIREGLHYNPYFPGGAIAMPK 120
           FANGGAYPPDLSLITKARHNG NYVF+LLTGYR+PPAGI IREGLHYNPYFPGGAIAMPK
Sbjct: 169 FANGGAYPPDLSLITKARHNGPNYVFALLTGYRDPPAGISIREGLHYNPYFPGGAIAMPK 228

Query: 121 MLNDGAVEYEDGTPATESQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVXXXXXXXXXXX 180
           MLND AVEYEDG PATE+QMGKD+VSFL+WAAEPEMEERKLMGFKWIF+           
Sbjct: 229 MLNDEAVEYEDGVPATEAQMGKDIVSFLAWAAEPEMEERKLMGFKWIFLLSLALLQAAYY 288

Query: 181 XXXXWSVLKSRKLVLDVVN 199
               WSVLKSRKLVLDVVN
Sbjct: 289 RRLKWSVLKSRKLVLDVVN 307