Miyakogusa Predicted Gene
- Lj0g3v0237819.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0237819.1 Non Chatacterized Hit- tr|I1LT94|I1LT94_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,73.88,0,PPR,Pentatricopeptide repeat; HCP-like,NULL;
TPR-like,NULL; PPR_2,Pentatricopeptide repeat; PPR_1,Pe,CUFF.15665.1
(758 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 701 0.0
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 318 1e-86
AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 9e-48
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 3e-47
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 5e-37
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 1e-33
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 2e-33
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 139 9e-33
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 136 4e-32
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 5e-32
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 6e-32
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 9e-31
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 131 2e-30
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 5e-30
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 6e-30
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 6e-30
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 7e-30
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 8e-30
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 8e-30
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 129 8e-30
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 9e-30
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 2e-29
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 2e-29
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 6e-29
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 5e-28
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 2e-26
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 117 2e-26
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 117 2e-26
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 117 4e-26
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 5e-26
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 5e-26
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 6e-26
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 6e-26
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 6e-26
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 7e-26
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 112 1e-24
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 111 2e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 4e-24
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 7e-24
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 108 1e-23
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 3e-22
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 6e-22
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 5e-20
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 6e-20
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 4e-19
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 5e-19
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 7e-19
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 8e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 9e-19
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-18
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 90 7e-18
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 88 2e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 6e-17
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 6e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 83 6e-16
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 8e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 8e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 9e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 9e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 82 1e-15
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 81 3e-15
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 5e-15
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-14
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 75 2e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 74 4e-13
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 74 5e-13
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 73 9e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-13
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 73 1e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 70 5e-12
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-12
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 8e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 8e-12
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 8e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 69 1e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 68 2e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 3e-11
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 67 3e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 7e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 65 1e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-10
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 64 3e-10
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 64 3e-10
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 64 4e-10
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 6e-10
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 62 2e-09
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 4e-09
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 4e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 60 6e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 60 7e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-08
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 57 6e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 57 6e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 57 6e-08
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 57 6e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 7e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 2e-07
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 55 2e-07
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 55 2e-07
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 54 3e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 54 5e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-07
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 53 8e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 52 2e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 52 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 52 2e-06
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 51 3e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 51 3e-06
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 50 5e-06
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 50 5e-06
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 50 6e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 9e-06
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-06
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/490 (65%), Positives = 396/490 (80%), Gaps = 1/490 (0%)
Query: 51 PPLNAIR-PPLQHSPSRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARH 109
PPL+A+R P P RDPNAPRLPDSTSALVG RLNLHNRVQSLIRA DLDAAS +AR
Sbjct: 111 PPLHALRRDPSAPPPKRDPNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQ 170
Query: 110 STFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEG 169
S FS+TRPTVFTCNAIIAAMYRAKRY+E+I+LF +FF QSNIVPN+VSYN +IN HCDEG
Sbjct: 171 SVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEG 230
Query: 170 RVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVY 229
VD ALE+YRHI+A APF PS+VTYRHLTKG + AGRI +A LLREML+KG ADS VY
Sbjct: 231 NVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVY 290
Query: 230 NNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 289
NNLI G+L+LG+ DKA E FDELK +C VYDG+VNAT+ME++F G DKEAM+SY+SL+D
Sbjct: 291 NNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLD 350
Query: 290 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 349
++F+M P T NVLLEV LK GKK +AWALF++MLDNH PPN +VNSDT IMVNECF +
Sbjct: 351 KKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKM 410
Query: 350 GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 409
G+F EA+ TF+K G+K SK F MD GY NI++RFCE G+L+EAE F E S+SL D
Sbjct: 411 GEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPAD 470
Query: 410 VPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILS 469
P+HR +IDAY+K ERIDDA+K+ RMVD LRVV +F RVF ELIKN K+ + A +L+
Sbjct: 471 APSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLT 530
Query: 470 KMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAG 529
KMGER+PKPDP+ Y+VV+RGLC LD++ +++ +++R+ VGVT LREF+ EVF+KAG
Sbjct: 531 KMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAG 590
Query: 530 RGDEIERLLD 539
R +EIE++L+
Sbjct: 591 RREEIEKILN 600
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 318 bits (815), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/501 (36%), Positives = 287/501 (57%), Gaps = 16/501 (3%)
Query: 49 IEPPLNAI-RPPLQHS----PSRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAA 103
+EPP+N+ R Q S P ++PN P+LP+S SALVG RL+LHN + LIR DL+ A
Sbjct: 55 MEPPVNSFNRSQQQQSQIPRPIQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEA 114
Query: 104 SSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVIN 163
+ RHS +S+ RPT+FT N ++AA R +Y A+ H F Q+ I PNI++YN +
Sbjct: 115 ALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYG-ALLQLHGFINQAGIAPNIITYNLIFQ 173
Query: 164 THCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHG 223
+ D + ++ALE Y+ I AP PS T+R L KG +S + +A+++ +M KG
Sbjct: 174 AYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFV 233
Query: 224 ADSLVYNNLISGFLELGNLDKANELFDELKERC--LVYDGVVNATYMEWFFNNGRDKEAM 281
D +VY+ L+ G ++ + D +L+ ELKE+ V DGVV M+ +F +KEAM
Sbjct: 234 VDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAM 293
Query: 282 DSYKSLM--DRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
+ Y+ + + + +M+ + N +LE L ++GK +A LFD + H PP AVN TF
Sbjct: 294 ECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTF 353
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
N+MVN GKF EA+ FR+ G S D +NN++++ C+N LL+EAE L+
Sbjct: 354 NVMVNGYCAGGKFEEAMEVFRQMGDFKCSP----DTLSFNNLMNQLCDNELLAEAEKLYG 409
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKND 459
E+ K++ PD T+ L+D K +ID+ + MV++ LR NR+ D+LIK
Sbjct: 410 EMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAG 469
Query: 460 KVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG-VGVTNSLR 518
K+ D M + K D Y+ ++R L G LD+ L+++ +++ V V+ L+
Sbjct: 470 KLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQ 528
Query: 519 EFVTEVFKKAGRGDEIERLLD 539
EFV E +K GR ++E+L++
Sbjct: 529 EFVKEELRKGGREGDLEKLME 549
>AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22565440-22566678 REVERSE
LENGTH=412
Length = 412
Score = 236 bits (603), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 148/382 (38%), Positives = 218/382 (57%), Gaps = 32/382 (8%)
Query: 90 RVQSLIRA-GDLDAASSVARHSTFSSTRP--TVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
RV LIR GDLD A+ AR + F+S + T C +II M R KR +A L+ FFF
Sbjct: 38 RVSYLIRCVGDLDTAAKYARLAVFTSIKSESTTTICQSIIGGMLRDKRLKDAYDLYEFFF 97
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG--PSAVTYRHLTKGFISA 204
Q N+ PN +N +I + +G V+ AL + I + PS ++R LTKG + +
Sbjct: 98 NQHNLRPNSHCWNYIIESGFQQGLVNDALHFHHRCINSGQVHDYPSDDSFRILTKGLVHS 157
Query: 205 GRIVEALDLLR-EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV----- 258
GR+ +A LR +N+ D + YNNLI GFL+LGN KAN + E K L+
Sbjct: 158 GRLDQAEAFLRGRTVNRTTYPDHVAYNNLIRGFLDLGNFKKANLVLGEFKRLFLIALSET 217
Query: 259 --------YDGVVN---ATYMEWFFNNGRDKEAMDSY-KSLMDRQFKMTPVTCNVLLEVL 306
Y+ V AT+ME++F G+ EAM+ Y + ++ + + T N LL+VL
Sbjct: 218 KDDLHHSNYENRVAFLMATFMEYWFKQGKQVEAMECYNRCVLSNRLLVCAETGNALLKVL 277
Query: 307 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 366
LK+G+K AWAL+ ++LD + ++SDT IMV+ECF++G F EA+ T++KA K+
Sbjct: 278 LKYGEKKNAWALYHELLDKNGTGK-GCLDSDTIKIMVDECFDMGWFSEAMETYKKARPKN 336
Query: 367 NSKAFAMDVAGYNNIISRFCENGLLSEAETLF-EELCSKSLSPDVPTHRTLIDAYMKMER 425
D II+RFCEN +LSEAE++F + L DV T++T+IDAY+K R
Sbjct: 337 -------DYLSDKYIITRFCENRMLSEAESVFVDSLADDFGYIDVNTYKTMIDAYVKAGR 389
Query: 426 IDDALKVFHRMVDAGLRVVTNF 447
I DA+K ++M+DA L+ V++
Sbjct: 390 IHDAIKTSNKMIDATLKEVSHL 411
>AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22535729-22536940 FORWARD
LENGTH=403
Length = 403
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 218/396 (55%), Gaps = 49/396 (12%)
Query: 66 RDPNA-PRL-PDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHST---FSSTRPTVF 120
RDP++ P+L P S S + ++L RV+++I +LD AS ++R + F R TVF
Sbjct: 30 RDPSSLPKLDPVSISYIDSRPISLRYRVRAMIEMSNLDEASKLSRLAVLNGFLVDRDTVF 89
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
CN++I AM AKRY++AI+LF++FF +S +PN +S + +I HCD+G VD ALELYRH
Sbjct: 90 ICNSVIGAMCSAKRYDDAISLFNYFFNESQTLPNTLSCDLIIKAHCDQGHVDDALELYRH 149
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
I+ P TY L K + A R EA L R M +VY+ LI GFL++G
Sbjct: 150 ILLDGRVAPGIETYMILAKALVDAKRFDEACVLARSM----SCCSFMVYDILIRGFLDIG 205
Query: 241 NLDKANELFDELK--------ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 292
N KA+++F+ELK + + N ++M ++F G+D+EAM+ +L D Q
Sbjct: 206 NFVKASQIFEELKGLDSKLPGREYHKANAIFNVSFMNYWFKQGKDEEAMEILANLEDAQV 265
Query: 293 KMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKF 352
+ P+ N +L+VL+KHGKKT+AW LF +M+ + +S+T +IM F
Sbjct: 266 -LNPIVGNRVLQVLVKHGKKTEAWELFGEMI--------EICDSETVDIMSE------YF 310
Query: 353 HEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS------L 406
E F + + Y +I CE+G +S+AE LF E+ + +
Sbjct: 311 SEKTVPFER-----------LRKTCYRKMIVSLCEHGKVSDAEKLFAEMFTDVDGGDLLV 359
Query: 407 SPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR 442
PD+ R +I+ Y+ + R+DDA+K ++M + LR
Sbjct: 360 GPDLLIFRAMINGYVSVGRVDDAIKTLNKMRISNLR 395
>AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:10314118-10317160 FORWARD
LENGTH=435
Length = 435
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 180/328 (54%), Gaps = 47/328 (14%)
Query: 135 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 194
Y+EAI+LF +FF +S +PN++S N +I HCD+G VD ALELYRHI+ P TY
Sbjct: 133 YDEAISLFDYFFNESQTLPNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETY 192
Query: 195 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK- 253
R LTK + A R+ EA D++R M D VY+ LI GFL+ G +A+++F+ELK
Sbjct: 193 RILTKALVGAKRLDEACDVVRSMSR----CDFAVYDILIRGFLDKGKFVRASQIFEELKG 248
Query: 254 ----------ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLL 303
+ + + N ++M+++F G+D+EAM+ + +L + + ++ N +L
Sbjct: 249 PNSKLPWRNYHKAI---AIFNVSFMDYWFKQGKDEEAMEIFATLEHAEL-LNTISGNGVL 304
Query: 304 EVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAG 363
+ L++HG+KT+AW LF M+ + +S+T I++++ G F E F +
Sbjct: 305 KCLVEHGRKTEAWELFLDMI--------EICDSETVGIIMSK---EGFFGEKTIPFERVR 353
Query: 364 TKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS------LSPDVPTHRTLI 417
Y +I+ C+ G + EAE LF ++ + PDV T R +I
Sbjct: 354 RTC-----------YTRMIASLCQQGNMLEAEKLFADMFADVDGDDLLAGPDVSTFRAMI 402
Query: 418 DAYMKMERIDDALKVFHRMVDAGLRVVT 445
+ Y+K+ R+DDA+K ++M + LR ++
Sbjct: 403 NGYVKVGRVDDAIKTLNKMKISNLRKLS 430
>AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:10338723-10341007 REVERSE
LENGTH=390
Length = 390
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 178/325 (54%), Gaps = 47/325 (14%)
Query: 135 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 194
Y+EAI+LF +FF +S +PN++S N +I HCD+G VD ALELYRHI+ P TY
Sbjct: 88 YDEAISLFDYFFNESQTLPNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETY 147
Query: 195 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK- 253
R LTK + A R+ EA D++R M D VY+ LI GFL+ G +A+++F+ELK
Sbjct: 148 RILTKALVGAKRLDEACDVVRSMSR----CDFAVYDILIRGFLDKGKFVRASQIFEELKG 203
Query: 254 ----------ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLL 303
+ + + N ++M+++F G+D+EAM+ + +L + + ++ N +L
Sbjct: 204 PNSKLPWRNYHKAI---AIFNVSFMDYWFKQGKDEEAMEIFATLEHAEL-LNTISGNGVL 259
Query: 304 EVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAG 363
+ L++HG+KT+AW LF M+ + +S+T I++++ G F E F +
Sbjct: 260 KCLVEHGRKTEAWELFLDMI--------EICDSETVGIIMSK---EGFFGEKTIPFERVR 308
Query: 364 TKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS------LSPDVPTHRTLI 417
Y +I+ C+ G + EAE LF ++ + PDV T R +I
Sbjct: 309 RTC-----------YTRMIASLCQQGNMLEAEKLFADMFADVDGDDLLAGPDVSTFRAMI 357
Query: 418 DAYMKMERIDDALKVFHRMVDAGLR 442
+ Y+K+ R+DDA+K ++M + LR
Sbjct: 358 NGYVKVGRVDDAIKTLNKMKISNLR 382
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 183/392 (46%), Gaps = 12/392 (3%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+PT+ T NA++ + + ++A+ L ++ PN V+Y V+ C G+ +A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
EL R + AV Y + G G + A +L EM KG AD ++Y LI G
Sbjct: 233 ELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
F G D +L ++ +R + D V + ++ F G+ +EA + +K ++ R
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
VT L++ K + +A + D M+ PN + TFNI++N +
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR-----TFNILINGYCKANLIDDG 406
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
L FRK + D YN +I FCE G L A+ LF+E+ S+ + PD+ +++
Sbjct: 407 LELFRKMSLR----GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
L+D + AL++F ++ + + + N + + KV D + + +
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
KPD Y ++I GLC KG L ++ +LL++ M
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEA-DLLFRKM 553
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 149/328 (45%), Gaps = 11/328 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
++ AG D + + R P V +A+I + + EA L H Q
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL-HKEMIQRG 347
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P+ V+Y ++I+ C E ++D A + ++ + GP+ T+ L G+ A I +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHML-DLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L+L R+M +G AD++ YN LI GF ELG L+ A ELF E+ R + D V ++
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+NG ++A++ ++ + + ++ N+++ + K AW LF + P+
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
+ T+NIM+ G EA FRK +S + YN +I G
Sbjct: 527 VK-----TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP----NGCTYNILIRAHLGEGD 577
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLID 418
+++ L EE+ S D T + ++D
Sbjct: 578 ATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 158/331 (47%), Gaps = 11/331 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L + G LD A ++ + + +I A R+++ L +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI-KRK 312
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P++V+++ +I+ EG++ A EL++ +I P VTY L GF ++ +A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISPDTVTYTSLIDGFCKENQLDKA 371
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+L M++KG G + +N LI+G+ + +D ELF ++ R +V D V T ++
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F G+ + A + ++ ++ R+ + V+ +LL+ L +G+ +A +F+++ +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI-----EKS 486
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
++ +NI+++ N K +A F K DV YN +I C+ G
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLF----CSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYM 421
LSEA+ LF ++ SP+ T+ LI A++
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 176/428 (41%), Gaps = 46/428 (10%)
Query: 84 RLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFH 143
+++ R++S I D A + + T S RP + + + + + R K+Y+ + L
Sbjct: 37 KVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK 96
Query: 144 FFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFIS 203
+ I N+ + + +IN C ++ +A II + P VT+ L G
Sbjct: 97 QMELKG-IAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG-YEPDTVTFSTLINGLCL 154
Query: 204 AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 263
GR+ EAL+L+ M+ GH + N L++G G + A L D + E + V
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
Query: 264 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 323
++ +G+ AM+ + + +R+ K+ V +++++ L K G A+ LF++M
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM- 273
Query: 324 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 383
K F D+ Y +I
Sbjct: 274 -------------------------------------------EIKGFKADIIIYTTLIR 290
Query: 384 RFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRV 443
FC G + L ++ + ++PDV LID ++K ++ +A ++ M+ G+
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 444 VTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
T + D K +++ H+L M + P+ + ++I G C L+D LEL
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 504 YQVMRYGV 511
++ GV
Sbjct: 411 RKMSLRGV 418
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 146/378 (38%), Gaps = 44/378 (11%)
Query: 170 RVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVY 229
R + L Y + ++ G V+YR + I + +A+DL +EM + +
Sbjct: 16 RTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDF 75
Query: 230 NNLISGFLELGNLDKANELFDELKE------------------RC--------------- 256
+ L S D +L +++ RC
Sbjct: 76 SRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIK 135
Query: 257 LVY--DGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 314
L Y D V +T + GR EA++ +++ K T +T N L+ L +GK +
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 315 AWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMD 374
A L D+M++ PN + +M G+ A+ RK + +D
Sbjct: 196 AVLLIDRMVETGFQPN-EVTYGPVLKVMCKS----GQTALAMELLRKM----EERKIKLD 246
Query: 375 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFH 434
Y+ II C++G L A LF E+ K D+ + TLI + R DD K+
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 435 RMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKG 494
M+ + + + D +K K+ + + +M +R PD Y +I G C +
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 495 LLDKSLELLYQVMRYGVG 512
LDK+ +L ++ G G
Sbjct: 367 QLDKANHMLDLMVSKGCG 384
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 184/393 (46%), Gaps = 12/393 (3%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
RP + T + +I + R +EA+ L + P+ V+Y V+N C G +AL
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRM-VEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
+L+R + S V Y + G +AL L EM KG AD + Y++LI G
Sbjct: 231 DLFRKM-EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G D ++ E+ R ++ D V + ++ F G+ EA + Y ++ R
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
+T N L++ K +A +FD M+ P+ T++I++N + +
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV-----TYSILINSYCKAKRVDDG 404
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+ FR+ +SK + YN ++ FC++G L+ A+ LF+E+ S+ + P V T+
Sbjct: 405 MRLFREI----SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
L+D ++ AL++F +M + + + N + + KV D + + ++
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
KPD Y V+I GLC KG L ++ ++L++ M+
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEA-DMLFRKMK 552
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 173/367 (47%), Gaps = 14/367 (3%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+ ++++ ++N C EGRV A+ L ++ P VT L G GR+ EAL
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-RPDLVTVSTLINGLCLKGRVSEALV 196
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L+ M+ G D + Y +++ + GN A +LF +++ER + V + ++
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
+G +A+ + + + K VT + L+ L GK + +M+ + P+
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
TF+ +++ GK EA + + T+ A D YN++I FC+ L
Sbjct: 317 -----TFSALIDVFVKEGKLLEAKELYNEMITR----GIAPDTITYNSLIDGFCKENCLH 367
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
EA +F+ + SK PD+ T+ LI++Y K +R+DD +++F + GL T N +
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV----MR 508
++ K+ + +M R P Y +++ GLC G L+K+LE+ ++ M
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 509 YGVGVTN 515
G+G+ N
Sbjct: 488 LGIGIYN 494
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 175/373 (46%), Gaps = 13/373 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ SL + G D A S+ + V T +++I + ++++ + + N
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-N 310
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I+P++V+++ +I+ EG++ A ELY +I T P +TY L GF + EA
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ M++KG D + Y+ LI+ + + +D LF E+ + L+ + + T +
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F +G+ A + ++ ++ R + VT +LL+ L +G+ +A +F++M +
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM-----QKS 484
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
+ +NI+++ N K +A + F + K DV YN +I C+ G
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLF----CSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
LSEA+ LF ++ +PD T+ LI A++ + ++++ M G ++
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600
Query: 451 VFDELIKNDKVID 463
V D L +D+ +D
Sbjct: 601 VIDML--SDRRLD 611
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 112/240 (46%), Gaps = 14/240 (5%)
Query: 276 RDKEAMDSYKSLMDRQFKM----TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 331
R K+ + ++ S++ R +K+ +T + L+ G+ ++A AL D+M++ P+
Sbjct: 117 RKKKLLFAF-SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 332 QAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 391
V++ ++N G+ EAL + F D Y +++R C++G
Sbjct: 176 VTVST-----LINGLCLKGRVSEALVLIDRM----VEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 392 SEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRV 451
+ A LF ++ +++ V + +ID+ K DDAL +F+ M G++ + +
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 452 FDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
L + K D A +L +M R+ PD + +I +G L ++ EL +++ G+
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S+ L+ + + V ++G L+AA + + P+V T ++ +
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
N+A+ +F +S + I YN +I+ C+ +VD A L+ ++ P VTY
Sbjct: 472 NKALEIFE-KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS-LSDKGVKPDVVTYN 529
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
+ G G + EA L R+M G D YN LI L L + EL +E+K
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 180/392 (45%), Gaps = 12/392 (3%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+PT+ T N ++ + + ++A+ L ++ PN V+Y V+N C G+ +A+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRM-VETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
EL R + AV Y + G G + A +L EM KG AD + YN LI G
Sbjct: 249 ELLRKM-EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
F G D +L ++ +R + + V + ++ F G+ +EA K +M R
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
+T N L++ K + +A + D M+ P+ TFNI++N + +
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM-----TFNILINGYCKANRIDDG 422
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
L FR+ + + YN ++ FC++G L A+ LF+E+ S+ + PD+ +++
Sbjct: 423 LELFREMSLR----GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
L+D ++ AL++F ++ + + + + + KV D + + +
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
K D Y ++I LC K L K+ ++L++ M
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKA-DILFRKM 569
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 192/451 (42%), Gaps = 48/451 (10%)
Query: 101 DAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALF---------HFFFTQSNI 151
D A + R S PTV N + +A+ + K+Y +AL H +T S +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 152 V-------------------------PNIVSYNNVINTHCDEGRVDVALELYRHIIATAP 186
+ P+ V +N ++N C E RV ALEL ++
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 187 FGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKAN 246
P+ +T L G G++ +A+ L+ M+ G + + Y +++ + G A
Sbjct: 190 -KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 247 ELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 306
EL +++ER + D V + ++ +G A + + + + FK +T N L+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 307 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 366
G+ L M+ PN TF+++++ GK EA ++
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVV-----TFSVLIDSFVKEGKLREADQLLKEM---- 359
Query: 367 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERI 426
+ A + YN++I FC+ L EA + + + SK PD+ T LI+ Y K RI
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 427 DDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVV 486
DD L++F M G+ T N + ++ K+ + +M R +PD Y+++
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 487 IRGLCAKGLLDKSLELLYQV----MRYGVGV 513
+ GLC G L+K+LE+ ++ M +G+
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 148/322 (45%), Gaps = 11/322 (3%)
Query: 97 AGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIV 156
AG D + + R P V T + +I + + + EA L Q I PN +
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM-QRGIAPNTI 369
Query: 157 SYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLRE 216
+YN++I+ C E R++ A+++ +I+ P +T+ L G+ A RI + L+L RE
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGC-DPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 217 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 276
M +G A+++ YN L+ GF + G L+ A +LF E+ R + D V ++ +NG
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 277 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 336
++A++ + + + ++ +++ + K AW LF + P +++
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL-----PLKGVKLDA 543
Query: 337 DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAET 396
+NIM++E +A FRK + A D YN +I + + A
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKM----TEEGHAPDELTYNILIRAHLGDDDATTAAE 599
Query: 397 LFEELCSKSLSPDVPTHRTLID 418
L EE+ S DV T + +I+
Sbjct: 600 LIEEMKSSGFPADVSTVKMVIN 621
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 151/368 (41%), Gaps = 58/368 (15%)
Query: 185 APFGPSAVTYR-HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLD 243
+ F ++YR L+ G + + +A+DL R+M+ + +N L S + +
Sbjct: 47 STFSDRNLSYRDKLSSGLVGI-KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYE 105
Query: 244 KANELFDELKE------------------RC--LVY---------------DGVVNATYM 268
L +++ RC L Y D V+ T +
Sbjct: 106 LVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL 165
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQFKM----TPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
R EA++ L+DR +M T +T N L+ L +GK + A L D+M++
Sbjct: 166 NGLCLECRVSEALE----LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE 221
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
PN + N+M G+ A+ RK + +D Y+ II
Sbjct: 222 TGFQPN-EVTYGPVLNVMCKS----GQTALAMELLRKM----EERNIKLDAVKYSIIIDG 272
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--R 442
C++G L A LF E+ K D+ T+ TLI + R DD K+ M+ +
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 443 VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
VVT + + D +K K+ + +L +M +R P+ Y +I G C + L++++++
Sbjct: 333 VVTF--SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 503 LYQVMRYG 510
+ ++ G
Sbjct: 391 VDLMISKG 398
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 186/417 (44%), Gaps = 12/417 (2%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L G + A + +P + T N ++ + + + EA+ L +
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM-VEYG 223
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
PN V+Y V+N C G+ +A+EL R + AV Y + G G + A
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+L EM KG + + YN LI GF G D +L ++ +R + + V + ++
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F G+ +EA + +K ++ R +T L++ K +A + D M+ PN
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
+ TFNI++N + + L FRK + D YN +I FCE G
Sbjct: 403 IR-----TFNILINGYCKANRIDDGLELFRKMSLR----GVVADTVTYNTLIQGFCELGK 453
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
L+ A+ LF+E+ S+ + P++ T++ L+D + AL++F ++ + + + N
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 451 VFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
+ + KV D + + + KP Y ++I GLC KG L ++ ELL++ M
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA-ELLFRKM 569
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 204/473 (43%), Gaps = 42/473 (8%)
Query: 78 SALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNE 137
SA L+ R++S + D A + R S PTV + + +A+ + K+Y+
Sbjct: 47 SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106
Query: 138 AIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHL 197
+AL + I N+ + + +IN C ++ +A II + P+ +T+ L
Sbjct: 107 VLALCKQMELKG-IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG-YEPNTITFSTL 164
Query: 198 TKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL 257
G GR+ EAL+L+ M+ GH D + N L++G G +A L D++ E
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224
Query: 258 VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA 317
+ V + +G+ AM+ + + +R K+ V +++++ L KHG A+
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 318 LFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK----------------------FHEA 355
LF++M N T+NI++ N G+ F
Sbjct: 285 LFNEMEMKGITTNII-----TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 356 LATFRKAGTKSNS---------KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 406
+ +F K G + + A D Y ++I FC+ L +A + + + SK
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 407 SPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAH 466
P++ T LI+ Y K RIDD L++F +M G+ T N + + K+
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 467 ILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV----MRYGVGVTN 515
+ +M R P+ Y++++ GLC G +K+LE+ ++ M +G+ N
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 146/322 (45%), Gaps = 11/322 (3%)
Query: 97 AGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIV 156
AG D + + R P V T + +I + + + EA L H I P+ +
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL-HKEMIHRGIAPDTI 369
Query: 157 SYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLRE 216
+Y ++I+ C E +D A ++ ++ + P+ T+ L G+ A RI + L+L R+
Sbjct: 370 TYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 217 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 276
M +G AD++ YN LI GF ELG L+ A ELF E+ R + + V ++ +NG
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 277 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 336
++A++ ++ + + ++ N+++ + K AW LF + P +
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK---- 544
Query: 337 DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAET 396
T+NIM+ G EA FRK A D YN +I +G +++
Sbjct: 545 -TYNIMIGGLCKKGPLSEAELLFRKM----EEDGHAPDGWTYNILIRAHLGDGDATKSVK 599
Query: 397 LFEELCSKSLSPDVPTHRTLID 418
L EEL S D T + +ID
Sbjct: 600 LIEELKRCGFSVDASTIKMVID 621
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 166/365 (45%), Gaps = 11/365 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L + G LD A ++ + T N +I A R+++ L +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI-KRK 328
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN+V+++ +I++ EG++ A EL++ +I P +TY L GF + +A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTITYTSLIDGFCKENHLDKA 387
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++ M++KG + +N LI+G+ + +D ELF ++ R +V D V T ++
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F G+ A + ++ ++ R+ VT +LL+ L +G+ +A +F+++ +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI-----EKS 502
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
++ +NI+++ N K +A F K V YN +I C+ G
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG----VKTYNIMIGGLCKKGP 558
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
LSEAE LF ++ +PD T+ LI A++ ++K+ + G V +
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618
Query: 451 VFDEL 455
V D L
Sbjct: 619 VIDML 623
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 10/220 (4%)
Query: 335 NSDTFNIMVN---ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 391
N T +IM+N C L A+ K G + N+ F+ +I+ C G +
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFS-------TLINGLCLEGRV 174
Query: 392 SEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRV 451
SEA L + + PD+ T TL++ + +A+ + +MV+ G + V
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 452 FDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+ + K+ + +L KM ER+ K D Y ++I GLC G LD + L ++ G+
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 512 GVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPPQLT 551
+ F AGR D+ +LL R P +
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 188/427 (44%), Gaps = 20/427 (4%)
Query: 88 HNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFT 147
+N ++ ++R G+L+ + + P + C +I R + +A +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL-E 164
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
S VP++++YN +I+ +C G ++ AL ++ P VTY + + +G++
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALS----VLDRMSVSPDVVTYNTILRSLCDSGKL 220
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
+A+++L ML + D + Y LI + A +L DE+++R D V
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
+ GR EA+ + + +T N++L + G+ A L ML
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKA---GTKSNSKAFAMDVAGYNNIISR 384
P+ TFNI++N G A+ K G + NS + YN ++
Sbjct: 341 SPSVV-----TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS-------YNPLLHG 388
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVV 444
FC+ + A E + S+ PD+ T+ T++ A K +++DA+++ +++ G V
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 445 TNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLY 504
N V D L K K +L +M +D KPD Y ++ GL +G +D++++ +
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 505 QVMRYGV 511
+ R G+
Sbjct: 509 EFERMGI 515
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 202/459 (44%), Gaps = 55/459 (11%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
++ R G A+ + S P V T N +I+ +A N A+++ + +
Sbjct: 144 IRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD----RMS 199
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ P++V+YN ++ + CD G++ A+E+ ++ + P +TY L + + A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHA 258
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ LL EM ++G D + YN L++G + G LD+A + +++ + + + +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ GR +A ++ + F + VT N+L+ L + G +A + ++M + PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
S ++N +++ K A+ + S+ D+ YN +++ C++G
Sbjct: 379 -----SLSYNPLLHGFCKEKKMDRAIEYLERM----VSRGCYPDIVTYNTMLTALCKDGK 429
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKM--------------------------- 423
+ +A + +L SK SP + T+ T+ID K
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 424 --------ERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKN---DKVIDCAHILSKMG 472
++D+A+K FH G+R N + L K+ D+ ID L M
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID---FLVFMI 546
Query: 473 ERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
R KP+ T Y ++I GL +G+ ++LELL ++ G+
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 163/400 (40%), Gaps = 19/400 (4%)
Query: 143 HFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFI 202
H+ S+ V NN + G ++ + +++ P + L +GF
Sbjct: 90 HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFC 148
Query: 203 SAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV 262
G+ +A +L + G D + YN +ISG+ + G ++ A + D + + D V
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVV 205
Query: 263 VNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM 322
T + ++G+ K+AM+ ++ R +T +L+E + A L D+M
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 323 LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKAFAMDVAGYN 379
D P+ T+N++VN G+ EA+ +G + N V +N
Sbjct: 266 RDRGCTPDVV-----TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN-------VITHN 313
Query: 380 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDA 439
I+ C G +AE L ++ K SP V T LI+ + + A+ + +M
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 440 GLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKS 499
G + + N + K K+ L +M R PD Y ++ LC G ++ +
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 500 LELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
+E+L Q+ G V + KAG+ + +LLD
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 7/205 (3%)
Query: 59 PLQHSPSRDPNAPRLPDSTSALVG----PRLNLHNR-VQSLIRAGDLDAASSVARHSTFS 113
PL H ++ R + +V P + +N + +L + G ++ A + +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 114 STRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDV 173
P + T N +I + +A + +AI L + ++ P+ ++Y++++ EG+VD
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK-DLKPDTITYSSLVGGLSREGKVDE 502
Query: 174 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI 233
A++ + H P+AVT+ + G + + A+D L M+N+G + Y LI
Sbjct: 503 AIKFF-HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 234 SGFLELGNLDKANELFDELKERCLV 258
G G +A EL +EL + L+
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGLM 586
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 205/452 (45%), Gaps = 18/452 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFF-FTQS 149
V+S R +D A S+ + P V + NA++ A R+KR N + A F +S
Sbjct: 141 VKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR-NISFAENVFKEMLES 199
Query: 150 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 209
+ PN+ +YN +I C G +DVAL L+ + T P+ VTY L G+ +I +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 210 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 269
LLR M KG + + YN +I+G G + + + + E+ R D V T ++
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
+ G +A+ + ++ + +T L+ + K G +A DQM P
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
N T+ +V+ G +EA R+ N F+ V YN +I+ C G
Sbjct: 379 N-----ERTYTTLVDGFSQKGYMNEAYRVLREM----NDNGFSPSVVTYNALINGHCVTG 429
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCN 449
+ +A + E++ K LSPDV ++ T++ + + +D+AL+V MV+ G++ T +
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 450 RVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRY 509
+ + + + + +M PD Y +I C +G L+K+L+L +++
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 510 GV---GVTNSLREFVTEVFKKAGRGDEIERLL 538
GV VT S+ + K R E +RLL
Sbjct: 550 GVLPDVVTYSV---LINGLNKQSRTREAKRLL 578
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 158/357 (44%), Gaps = 43/357 (12%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ S+ +AG+++ A P T ++ + NEA + +
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM-NDNG 410
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
P++V+YN +IN HC G+++ A+ + + P V+Y + GF + + EA
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL-----VYDGVVNA 265
L + REM+ KG D++ Y++LI GF E +A +L++E+ L Y ++NA
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
ME G ++A+ + ++++ VT +VL+ L K + +A L ++
Sbjct: 530 YCME-----GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 326 HTPPNFQAVNSD-TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
+ P SD T++ ++ C N+ +F ++ +I
Sbjct: 585 ESVP------SDVTYHTLIENCSNI-EFKSVVS-----------------------LIKG 614
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
FC G+++EA+ +FE + K+ PD + +I + + I A ++ MV +G
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 144/338 (42%), Gaps = 31/338 (9%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V + G ++ A V R + P+V T NA+I + +AIA+ +
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKG 445
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ P++VSY+ V++ C VD AL + R ++ P +TY L +GF R EA
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG-IKPDTITYSSLIQGFCEQRRTKEA 504
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
DL EML G D Y LI+ + G+L+KA +L +E+ E+ ++ D V + +
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
R +EA K L+ + F V +V + +++N +
Sbjct: 565 LNKQSRTREA----KRLLLKLFYEESVPSDV----------------TYHTLIENCSNIE 604
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
F++V S ++ C G EA F K++ D YN +I C G
Sbjct: 605 FKSVVS----LIKGFCMK-GMMTEADQVFESMLGKNHKP----DGTAYNIMIHGHCRAGD 655
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDD 428
+ +A TL++E+ T L+ A K ++++
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 166/359 (46%), Gaps = 9/359 (2%)
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
VS N +++ C EGRV+ AL + + F P T+ L G AG + A++++
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
ML +G+ D YN++ISG +LG + +A E+ D++ R + V T +
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 276 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 335
+ +EA + + L + T N L++ L A LF++M P +
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP-----D 434
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
T+N++++ + GK EAL ++ +++ V YN +I FC+ EAE
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS----VITYNTLIDGFCKANKTREAE 490
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDEL 455
+F+E+ +S + T+ TLID K R++DA ++ +M+ G + N +
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 456 IKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVT 514
+ + A I+ M +PD Y +I GLC G ++ + +LL + G+ +T
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 185/412 (44%), Gaps = 13/412 (3%)
Query: 101 DAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNN 160
DA + + S P +T N ++ + +A AI + Q P++ +YN+
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML-QEGYDPDVYTYNS 335
Query: 161 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 220
VI+ C G V A+E+ +I T P+ VTY L ++ EA +L R + +K
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMI-TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 221 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 280
G D +N+LI G N A ELF+E++ + D ++ + G+ EA
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 281 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 340
++ K + + +T N L++ K K +A +FD+M + H NS T+N
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-EVHGVSR----NSVTYN 509
Query: 341 IMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 400
+++ + +A + + D YN++++ FC G + +A + +
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKP----DKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 401 LCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDK 460
+ S PD+ T+ TLI K R++ A K+ + G+ + + N V L + K
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 625
Query: 461 VIDCAHILSKMGERDPKP-DPTCYEVVIRGLC-AKGLLDKSLELLYQVMRYG 510
+ ++ +M E++ P D Y +V RGLC G + ++++ L +++ G
Sbjct: 626 TTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 184/445 (41%), Gaps = 46/445 (10%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
R+G D + S T +I + + + +E +++ + + + P+
Sbjct: 95 RSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDT 154
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
YN ++N D + + +E+ ++ P T+ L K A ++ A+ +L
Sbjct: 155 HFYNRMLNLLVDGNSLKL-VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLE 213
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
+M + G D + ++ G++E G+LD A + +++ E + V + F G
Sbjct: 214 DMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEG 273
Query: 276 RDKEAMDSYKSLMDRQ-FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 334
R ++A++ + + ++ F T N L+ L K G A + D ML P+
Sbjct: 274 RVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY-- 331
Query: 335 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
T+N +++ LG+ EA+ + T+ S + YN +IS C+ + EA
Sbjct: 332 ---TYNSVISGLCKLGEVKEAVEVLDQMITRDCSP----NTVTYNTLISTLCKENQVEEA 384
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDE 454
L L SK + PDV T +LI GL + N +RV E
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQ---------------------GLCLTRN--HRVAME 421
Query: 455 LIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVT 514
L + +M + +PD Y ++I LC+KG LD++L +L Q+ G +
Sbjct: 422 LFE------------EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 515 NSLREFVTEVFKKAGRGDEIERLLD 539
+ + F KA + E E + D
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFD 494
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 12/250 (4%)
Query: 265 ATYMEWFFNNGRDKEAMDSYKSLMDRQ---FKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
A Y E GR D K L D + +M T +L+E + + + ++ D
Sbjct: 84 ALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDW 143
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
M+D + DT N NL +L + K + DV+ +N +
Sbjct: 144 MIDEF------GLKPDTH--FYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
I C L A + E++ S L PD T T++ Y++ +D AL++ +MV+ G
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 442 RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDP-KPDPTCYEVVIRGLCAKGLLDKSL 500
N + K +V D + + +M +D PD + ++ GLC G + ++
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 501 ELLYQVMRYG 510
E++ +++ G
Sbjct: 316 EIMDVMLQEG 325
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQS-NIVPN 154
R GD+ A+ + + T + P + T +I+ + +A R A L + N+ P+
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 155 IVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR-IVEALDL 213
+YN VI + + A+ L+R ++ P AV+YR + +G + G I EA+D
Sbjct: 612 --AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 214 LREMLNKG 221
L E+L KG
Sbjct: 670 LVELLEKG 677
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 208/458 (45%), Gaps = 14/458 (3%)
Query: 78 SALVGPRLNLHNRVQSL-IRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYN 136
+A V P L +N + + + + + A +P VF+ + +I + +A + +
Sbjct: 142 TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLD 201
Query: 137 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 196
+A+ LF ++ + P++ YN +I+ E A+EL+ ++ + P+ T+
Sbjct: 202 DALELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 197 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 256
+ G GR+ + L + M D Y++LI G + GN+DKA +F+EL ER
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 257 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 316
D V T + F G+ KE+++ ++ +M+ + + V+ N+L++ LL++GK +A
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEAT 379
Query: 317 ALFDQMLDNHTPPNFQAVNSDTFNIMVNE-CFNLGKFHEALATFRKAGTKSNSKAFAMDV 375
++ M P A + T+ I ++ C N G ++AL ++ S +DV
Sbjct: 380 MIWRLM-----PAKGYAADKTTYGIFIHGLCVN-GYVNKALGVMQEV----ESSGGHLDV 429
Query: 376 AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHR 435
Y +II C+ L EA L +E+ + + LI ++ R+ +A
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Query: 436 MVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGL 495
M G R N + L K K + + + +M E KPD Y +++ GLC
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 496 LDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDE 533
+D +LEL +Q ++ G+ + + G+ D+
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 193/446 (43%), Gaps = 50/446 (11%)
Query: 102 AASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNV 161
A R P + + N ++ A AK++ + +LF +F T + + PN+ +YN +
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET-AGVAPNLQTYNVL 155
Query: 162 INTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG 221
I C + + A + + F P +Y + AG++ +AL+L EM +G
Sbjct: 156 IKMSCKKKEFEKA-RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 222 HGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM------------- 268
D YN LI GFL+ + A EL+D L E VY V M
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 269 ----EWFFNNGRDKEAMDSYKSLM--------------------DRQFKMTPVTCNVLLE 304
E N R+K+ + +Y SL+ +R+ + VT N +L
Sbjct: 275 LKIWERMKQNEREKD-LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 305 VLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGT 364
+ GK ++ L+ M + +VN ++NI++ GK EA +R
Sbjct: 334 GFCRCGKIKESLELWRIM------EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMP- 386
Query: 365 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKME 424
+K +A D Y I C NG +++A + +E+ S DV + ++ID K +
Sbjct: 387 ---AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 425 RIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYE 484
R+++A + M G+ + ++ CN + LI++ ++ + + L +MG+ +P Y
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503
Query: 485 VVIRGLCAKGLLDKSLELLYQVMRYG 510
++I GLC G ++ + +++ G
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENG 529
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 192/445 (43%), Gaps = 23/445 (5%)
Query: 72 RLPDSTSALVGPRLNLHN-RVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMY 130
RL + +S V P + HN + L + G +D + + ++T +++I +
Sbjct: 244 RLLEDSS--VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 131 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 190
A ++A ++F+ + ++V+YN ++ C G++ +LEL+R I +
Sbjct: 302 DAGNVDKAESVFNEL-DERKASIDVVTYNTMLGGFCRCGKIKESLELWR--IMEHKNSVN 358
Query: 191 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 250
V+Y L KG + G+I EA + R M KG+ AD Y I G G ++KA +
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 251 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 310
E++ D A+ ++ R +EA + K + ++ CN L+ L++
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 311 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 370
+ +A +M N P ++NI++ GKF EA A F K ++ K
Sbjct: 479 RLGEASFFLREMGKNGCRPTVV-----SYNILICGLCKAGKFGEASA-FVKEMLENGWKP 532
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
D+ Y+ ++ C + + A L+ + L DV H LI + ++DDA+
Sbjct: 533 ---DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 431 KVF----HRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVV 486
V HR A L V N F ++ +++ + KMG +PD Y +
Sbjct: 590 TVMANMEHRNCTANL-VTYNTLMEGFFKVGDSNRATVIWGYMYKMG---LQPDIISYNTI 645
Query: 487 IRGLCAKGLLDKSLELLYQVMRYGV 511
++GLC + ++E +G+
Sbjct: 646 MKGLCMCRGVSYAMEFFDDARNHGI 670
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 48 RIEPPLNAIRPPLQHSPSRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVA 107
R+E N ++ +H + + +AL+G LIR L AS
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHV------CNALIG----------GLIRDSRLGEASFFL 487
Query: 108 RHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCD 167
R + RPTV + N +I + +A ++ EA A ++ P++ +Y+ ++ C
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML-ENGWKPDLKTYSILLCGLCR 546
Query: 168 EGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSL 227
+ ++D+ALEL+ H + + + L G S G++ +A+ ++ M ++ A+ +
Sbjct: 547 DRKIDLALELW-HQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 228 VYNNLISGFLELGNLDKANELF 249
YN L+ GF ++G+ ++A ++
Sbjct: 606 TYNTLMEGFFKVGDSNRATVIW 627
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 184/387 (47%), Gaps = 14/387 (3%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P++ + +++ + ++K Y+ I+LFH I ++ SYN VIN C R +AL
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+ ++ + P VT L GF R+ +A+DL+ +M G D ++YN +I G
Sbjct: 126 VVGKMMKFG-YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
++G ++ A ELFD ++ + D V + + +GR +A + ++ R
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
+T +++V +K GK ++A L+++M P+ T+N ++N G+ EA
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF-----TYNSLINGLCMHGRVDEAK 299
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
TK DV YN +I+ FC++ + E LF E+ + L D T+ T+
Sbjct: 300 QMLDLMVTKGCLP----DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 417 IDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDP 476
I Y + R D A ++F RM D+ + T + + L N +V + M + +
Sbjct: 356 IQGYFQAGRPDAAQEIFSRM-DSRPNIRTY--SILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 477 KPDPTCYEVVIRGLCAKGLLDKSLELL 503
+ D T Y +VI G+C G ++ + +L
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLF 439
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 144/327 (44%), Gaps = 49/327 (14%)
Query: 115 TRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVA 174
R T N+++A + + R+++A L + +IVPN++++ VI+ EG+ A
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 175 LELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLIS 234
++LY + P TY L G GR+ EA +L M+ KG D + YN LI+
Sbjct: 264 MKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 235 GFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 294
GF + +D+ +LF E+ +R LV D + T ++ +F GR A + + S MD + +
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF-SRMDSRPNI 381
Query: 295 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 354
T ++LL L + + +A LF+ M
Sbjct: 382 R--TYSILLYGLCMNWRVEKALVLFENM-------------------------------- 407
Query: 355 ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
+D+ YN +I C+ G + +A LF L K L PDV ++
Sbjct: 408 ------------QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGL 441
T+I + + + D + ++ +M + GL
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 154/403 (38%), Gaps = 83/403 (20%)
Query: 137 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 196
E I LF QS +P+IV ++ V++ D+ + L+ H+ G +Y
Sbjct: 52 EEIDLFCKMI-QSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNI 109
Query: 197 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 256
+ R V AL ++ +M+ G+ D + ++LI+GF + N +FD
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ------GNRVFD------ 157
Query: 257 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 316
A+D + + F+ V N +++ K G A
Sbjct: 158 -----------------------AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 317 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 376
LFD+M + + + T+N +V G++ +A R + +V
Sbjct: 195 ELFDRMERDGVRAD-----AVTYNSLVAGLCCSGRWSDAARLMRDMVMRD----IVPNVI 245
Query: 377 GYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
+ +I F + G SEA L+EE+ + + PDV T+ +LI+ R+D+A ++ M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 437 VDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLL 496
V G C PD Y +I G C +
Sbjct: 306 VTKG-----------------------CL------------PDVVTYNTLINGFCKSKRV 330
Query: 497 DKSLELLYQVMRYG-VGVTNSLREFVTEVFKKAGRGDEIERLL 538
D+ +L ++ + G VG T + + F +AGR D + +
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYF-QAGRPDAAQEIF 372
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
++NI++N +F AL+ K + DV +++I+ FC+ + +A L
Sbjct: 106 SYNIVINCLCRCSRFVIALSVV----GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
++ PDV + T+ID K+ ++DA+++F RM G+R N + L
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG----V 513
+ + D A ++ M RD P+ + VI +G ++++L ++ R V
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 514 TNSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPPQLT 551
NSL + GR DE +++LD + P +
Sbjct: 282 YNSLINGLC----MHGRVDEAKQMLDLMVTKGCLPDVV 315
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 6/180 (3%)
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
D+ YN +I+ C A ++ ++ PDV T +LI+ + + R+ DA+ +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 434 HRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAK 493
+M + G R N + D K V D + +M + D Y ++ GLC
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 494 GLLDKSLELLY-QVMRYGVGVTNSLREF--VTEVFKKAGRGDEIERLLDFNTPRYRPPQL 550
G + L+ VMR + ++ F V +VF K G+ E +L + T R P +
Sbjct: 223 GRWSDAARLMRDMVMR---DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 198/445 (44%), Gaps = 37/445 (8%)
Query: 97 AGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIV 156
AG D A S+ + P+V N I+ + + + +EA+ +F + + PN+
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNLS 378
Query: 157 SYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLRE 216
+YN +I+ C G++D A EL R + A P+ T + + ++ EA + E
Sbjct: 379 TYNILIDMLCRAGKLDTAFEL-RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEE 437
Query: 217 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 276
M K D + + +LI G ++G +D A ++++++ + + +V + ++ FFN+GR
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 277 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM-------------- 322
++ YK ++++ N ++ + K G+ + A+F+++
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 323 ---------LDNHTPPNFQA-------VNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 366
N T F + +++ +NI+++ GK ++A + TK
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK- 616
Query: 367 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERI 426
F V Y ++I + L EA LFEE SK + +V + +LID + K+ RI
Sbjct: 617 ---GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 427 DDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVV 486
D+A + ++ GL N + D L+K +++ + M E P+ Y ++
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 487 IRGLCAKGLLDKSLELLYQVMRYGV 511
I GLC +K+ ++ + G+
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGM 758
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 128/560 (22%), Positives = 227/560 (40%), Gaps = 99/560 (17%)
Query: 66 RDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAI 125
R P P+S ++L+ + R + DA + + + P+V TC +
Sbjct: 90 RRTELPHCPESYNSLL----------LVMARCRNFDALDQILGEMSVAGFGPSVNTCIEM 139
Query: 126 IAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA 185
+ +A + E + + P +Y +I D+ L L++ +
Sbjct: 140 VLGCVKANKLREGYDVVQ-MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQ-MQEL 197
Query: 186 PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 245
+ P+ + L +GF GR+ AL LL EM + AD ++YN I F ++G +D A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 246 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYK-------------------- 285
+ F E++ L D V + + R EA++ ++
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 286 -----------SLMDRQFKM----TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
SL++RQ + + N +L L K GK +A +F++M + P
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-- 375
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALA---TFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
N T+NI+++ GK A + +KAG N V N ++ R C+
Sbjct: 376 ----NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN-------VRTVNIMVDRLCK 424
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR----- 442
+ L EA +FEE+ K +PD T +LID K+ R+DDA KV+ +M+D+ R
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 443 ---VVTNFCN--------RVFDELIKN---------DKVIDCAH----------ILSKMG 472
++ NF N +++ ++I + +DC + ++
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 473 ERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGD 532
R PD Y ++I GL G +++ EL Y + G + V + F K G+ +
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 533 EIERLL-DFNTPRYRPPQLT 551
+ +LL + T + P +T
Sbjct: 605 KAYQLLEEMKTKGFEPTVVT 624
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 207/499 (41%), Gaps = 50/499 (10%)
Query: 54 NAIRPPLQHSPSRDPNAPRLPDSTSALVGPRLNLHN-RVQSLIRAGDLDAASSVARHSTF 112
N I L+ D A ++ + P L+ +N + L RAG LD A +
Sbjct: 347 NCILTCLRKMGKVDE-ALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 113 SSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD 172
+ P V T N ++ + ++++ +EA A+F P+ +++ ++I+ GRVD
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 173 VALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNL 232
A ++Y ++ + +++ Y L K F + GR + + ++M+N+ D + N
Sbjct: 465 DAYKVYEKML-DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 233 ISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 292
+ + G +K +F+E+K R V D + + G E + + S+ ++
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 293 KMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKF 352
+ N++++ K GK +A+ L ++M P T+ +++ + +
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV-----TYGSVIDGLAKIDRL 638
Query: 353 HEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 412
EA F +A SK ++V Y+++I F + G + EA + EEL K L+P++ T
Sbjct: 639 DEAYMLFEEA----KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 413 HRTLIDAYMKMERIDDALKVFHRMVDA--------------GLRVVTNFCNRVF------ 452
+L+DA +K E I++AL F M + GL V F N+ F
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF-NKAFVFWQEM 753
Query: 453 ----------------DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLL 496
L K + + + + PD CY +I GL
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 497 DKSLELLYQVMRYGVGVTN 515
+ L + R G+ + N
Sbjct: 814 MDAFSLFEETRRRGLPIHN 832
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 148/346 (42%), Gaps = 17/346 (4%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P + N + M++A + A+F VP+ SY+ +I+ G + E
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEI-KARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L+ + + Y + GF G++ +A LL EM KG + Y ++I G
Sbjct: 574 LFYSMKEQGCVLDTR-AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
++ LD+A LF+E K + + + V+ ++ ++ F GR EA + LM +
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
T N LL+ L+K + +A F M + PN T+ I++N + KF++A
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPN-----QVTYGILINGLCKVRKFNKAF 747
Query: 357 ATFR---KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
++ K G K ++ Y +IS + G ++EA LF+ + PD +
Sbjct: 748 VFWQEMQKQGMKPST-------ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKND 459
+I+ R DA +F GL + C + D L KND
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKND 846
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 156/350 (44%), Gaps = 16/350 (4%)
Query: 83 PRLNLHNR-VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIAL 141
P L L N + + +AG+ + ++ P + + +I + +A NE L
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 142 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 201
F + + V + +YN VI+ C G+V+ A +L + T F P+ VTY + G
Sbjct: 575 F-YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGL 632
Query: 202 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
R+ EA L E +K + ++Y++LI GF ++G +D+A + +EL ++ L +
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALF 319
+ ++ EA+ ++S+ ++ K TP VT +L+ L K K +A+ +
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSM--KELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 320 DQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 379
+M P+ + ++ M++ G EA A F + K+N D A YN
Sbjct: 751 QEMQKQGMKPS-----TISYTTMISGLAKAGNIAEAGALFDR--FKANGGV--PDSACYN 801
Query: 380 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDA 429
+I +A +LFEE + L T L+D K + ++ A
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 203/452 (44%), Gaps = 46/452 (10%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P++F N +++A+ + K+++ I+L + I N+ +YN +IN C ++ +AL
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI--- 233
L ++ + PS VT L G+ RI +A+ L+ +M+ G+ D++ + LI
Sbjct: 67 LLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 234 --------------------------------SGFLELGNLDKANELFDELKERCLVYDG 261
+G + G++D A L ++++ + D
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
V+ T ++ +A++ +K + + + VT + L+ L +G+ + A L
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
M++ PN TFN +++ GKF EA K ++ D+ YN++
Sbjct: 246 MIEKKINPNLV-----TFNALIDAFVKEGKFVEA----EKLHDDMIKRSIDPDIFTYNSL 296
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
I+ FC + L +A+ +FE + SK PD+ T+ TLI + K +R++D ++F M GL
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 442 RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLE 501
T + L + + + +M PD Y +++ GLC G L+K+LE
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 502 LLYQVMRYGVGVTNSLREFVTEVFKKAGRGDE 533
+ + + + + + + E KAG+ D+
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 173/395 (43%), Gaps = 11/395 (2%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
RP T +I ++ + +EA+AL Q PN+V+Y V+N C G +D+A
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
L + A A V + + + +AL+L +EM KG + + Y++LIS
Sbjct: 171 NLLNKMEA-AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G A++L ++ E+ + + V ++ F G+ EA + ++ R
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
T N L+ H + +A +F+ M+ P+ DT+N ++ + +
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL-----DTYNTLIKGFCKSKRVEDG 344
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
FR+ + + D Y +I +G A+ +F+++ S + PD+ T+
Sbjct: 345 TELFREM----SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
L+D +++ AL+VF M + +++ + + + K KV D + + +
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
KP+ Y +I GLC+K LL ++ LL ++ G
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 176/418 (42%), Gaps = 50/418 (11%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V L + GD+D A ++ + V N II ++ + + ++A+ LF T+
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG- 215
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN+V+Y+++I+ C GR A +L +I P+ VT+ L F+ G+ VEA
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L +M+ + D YN+LI+GF LDKA ++F+ + + D T ++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F + R ++ + ++ + R VT L++ L G A +F QM+ + PP
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP- 393
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
D+ Y+ ++ C NG
Sbjct: 394 -------------------------------------------DIMTYSILLDGLCNNGK 410
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--VVTNFC 448
L +A +F+ + + D+ + T+I+ K ++DD +F + G++ VVT
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY-- 468
Query: 449 NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
N + L + + +L KM E P PD Y +IR G S EL+ ++
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 2/207 (0%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LVG + +Q L GD D A V + P + T + ++ + +
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
+A+ +F + +S I +I Y +I C G+VD +L+ + + P+ VTY
Sbjct: 412 EKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYN 469
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
+ G S + EA LL++M G DS YN LI L G+ + EL E++
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 529
Query: 256 CLVYDGVVNATYMEWFFNNGRDKEAMD 282
V D + DK +D
Sbjct: 530 RFVGDASTIGLVANMLHDGRLDKSFLD 556
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 167/355 (47%), Gaps = 24/355 (6%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V L + GD+D A ++ + + V N II ++ + + A+ LF T+
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG- 288
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN+V+YN++IN C+ GR A L +++ P+ VT+ L F G++VEA
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE-KKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER-CL----VYDGVVNA 265
L EM+ + D++ YN LI+GF LD+A ++F + + CL Y+ ++N
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
F R ++ ++ ++ + R VT +++ + G A +F QM+ N
Sbjct: 408 -----FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
P + T++I+++ + GK AL F+ +++ YN +I
Sbjct: 463 RVPTDIM-----TYSILLHGLCSYGKLDTALVIFKYL----QKSEMELNIFIYNTMIEGM 513
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
C+ G + EA LF CS S+ PDV T+ T+I + +A +F +M + G
Sbjct: 514 CKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 176/381 (46%), Gaps = 10/381 (2%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+IV+ ++++N +C R+ A+ L ++ + P T+ L G + EA+
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L+ +M+ +G D + Y +++G + G++D A L ++++ + + V+ T ++
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
+ A+D + + + + VT N L+ L +G+ + A L ML+ PN
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
TFN +++ F GK EA K + ++ D YN +I+ FC + L
Sbjct: 330 -----TFNALIDAFFKEGKLVEA----EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
EA+ +F+ + SK P++ T+ TLI+ + K +R++D +++F M GL T +
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG 512
+ + +M D Y +++ GLC+ G LD +L + + + +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 513 VTNSLREFVTEVFKKAGRGDE 533
+ + + E KAG+ E
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGE 521
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 174/395 (44%), Gaps = 14/395 (3%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P FT +I ++ + +EA+AL Q P++V+Y V+N C G +D+AL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
L + A A + V + + + A+DL EM KG + + YN+LI+
Sbjct: 244 NLLNKMEA-ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G A+ L + E+ + + V ++ FF G+ EA ++ ++ R
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
+T N+L+ H + +A +F M+ PN Q T+N ++N + +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ-----TYNTLINGFCKCKRVEDG 417
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+ FR+ + + + Y II F + G A+ +F+++ S + D+ T+
Sbjct: 418 VELFREM----SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
L+ ++D AL +F + + + + N + + + K KV + + +
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS--- 530
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
KPD Y +I GLC+K LL ++ +L ++ G
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 179/447 (40%), Gaps = 51/447 (11%)
Query: 87 LHNRVQSLIRAGD-LDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFF 145
L NR+ +I+ D +D + + F P++ N +++A+ + ++ I+L
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPF----PSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 146 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 205
T I ++ +Y+ IN C ++ +AL + ++ + P VT L G+ +
Sbjct: 110 QTLG-ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG-YEPDIVTLSSLLNGYCHSK 167
Query: 206 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 265
RI +A+ L+ +M+ G+ D+ + LI G +A L D++ +R D V
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
T + G A++ + + K V N +++ L K+ A LF +M
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
PN V YN++I+
Sbjct: 288 GIRPN--------------------------------------------VVTYNSLINCL 303
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVT 445
C G S+A L + K ++P+V T LIDA+ K ++ +A K+ M+ + T
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 446 NFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQ 505
N + + ++++ + + M +D P+ Y +I G C ++ +EL +
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 506 VMRYGVGVTNSLREFVTEVFKKAGRGD 532
+ + G+ + + F +AG D
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 5/186 (2%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LVG + +Q +AGD D+A V + + + T + ++ + +
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
+ A+ +F + +S + NI YN +I C G+V A +L+ + P VTY
Sbjct: 485 DTALVIFKYL-QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF----CSLSIKPDVVTYN 539
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
+ G S + EA DL R+M G +S YN LI L + + EL E++
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 256 CLVYDG 261
V D
Sbjct: 600 GFVGDA 605
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 159/374 (42%), Gaps = 18/374 (4%)
Query: 186 PFGPSAVTYRHLTKGFIS-AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDK 244
F ++ YR + + +S ++ +A+DL +M+ + +N L+S ++ +
Sbjct: 42 SFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL 101
Query: 245 ANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLE 304
L ++++ + +D + ++ F + A+ +M ++ VT + LL
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 305 VLLKHGKKTQAWALFDQMLD-NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAG 363
+ + A AL DQM++ + P F TF +++ F K EA+A +
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTF------TFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 364 TKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKM 423
+ D+ Y +++ C+ G + A L ++ + + +V T+ID+ K
Sbjct: 216 QRGCQP----DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 424 ERIDDALKVFHRMVDAGLR--VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPT 481
++ A+ +F M G+R VVT N + + L + D + +LS M E+ P+
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTY--NSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 482 CYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFN 541
+ +I +G L ++ +L ++++ + + F R DE +++ F
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 542 TPRYRPPQLTRQPY 555
+ P + Q Y
Sbjct: 390 VSKDCLPNI--QTY 401
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 201/451 (44%), Gaps = 31/451 (6%)
Query: 95 IRAG--DLDAASSVARHSTFSSTRP--TVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+R+G D+ ++A +RP ++ + +A+ R K++N + F +
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNG 118
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I NI + N +IN C + A + ++ + P T+ L KG G++ EA
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG-YEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ L+ M+ G D + YN++++G G+ A +L +++ER + D +T ++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+G A+ +K + + K + VT N L+ L K GK L M+ PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
TFN++++ GK EA +++ T+ S ++ YN ++ +C
Sbjct: 298 VI-----TFNVLLDVFVKEGKLQEANELYKEMITRGISP----NIITYNTLMDGYCMQNR 348
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-------- 442
LSEA + + + SPD+ T +LI Y ++R+DD +KVF + GL
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 443 VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
+V FC ++ K+ + +M PD Y +++ GLC G L+K+LE+
Sbjct: 409 LVQGFC--------QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 503 LYQVMRYGVGVTNSLREFVTEVFKKAGRGDE 533
+ + + + + + E K G+ ++
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 176/391 (45%), Gaps = 49/391 (12%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+ ++N +I EG+V A+ L ++ P VTY + G +G ALD
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC-QPDVVTYNSIVNGICRSGDTSLALD 214
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
LLR+M + AD Y+ +I G +D A LF E++ + + V + +
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
G+ + K ++ R+ +T NVLL+V +K GK +A L+ +M+ PN
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 333 AVNS---------------DTFNIMV-NEC--------------FNLGKFHEALATFR-- 360
N+ + ++MV N+C + + + + FR
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 361 -KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDA 419
K G +N+ +++ V G FC++G + AE LF+E+ S + PDV T+ L+D
Sbjct: 395 SKRGLVANAVTYSILVQG-------FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 420 YMKMERIDDALKVFHRM----VDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
+++ AL++F + +D G+ + T + + + K KV D ++ + +
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTT----IIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
KP+ Y V+I GLC KG L ++ LL ++
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 181/383 (47%), Gaps = 17/383 (4%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ SL R G +DAA S+ + + +V T N+++ + +A ++N+ L ++
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE- 293
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
IVPN++++N +++ EG++ A ELY+ +I T P+ +TY L G+ R+ EA
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++L M+ D + + +LI G+ + +D ++F + +R LV + V + ++
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F +G+ K A + ++ ++ +T +LL+ L +GK +A +F+ + + +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL--QKSKMD 470
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRK---AGTKSNSKAFAMDVAGYNNIISRFCE 387
V T I+ C GK +A F G K N V Y +IS C+
Sbjct: 471 LGIVMYTT--IIEGMCKG-GKVEDAWNLFCSLPCKGVKPN-------VMTYTVMISGLCK 520
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNF 447
G LSEA L ++ +P+ T+ TLI A+++ + + K+ M G +
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 448 CNRVFDELIKNDKVIDCAHILSK 470
V D L+ K + + LSK
Sbjct: 581 IKMVIDMLLSAMKRLTLRYCLSK 603
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 183/443 (41%), Gaps = 38/443 (8%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P T N +I ++ + +EA+ L ++ P++V+YN+++N C G +AL+
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L R + TY + G I A+ L +EM KG + + YN+L+ G
Sbjct: 215 LLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ G + L ++ R +V + + ++ F G+ +EA + YK ++ R
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
+T N L++ + ++A + D M+ N P+ TF ++ + + + +
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV-----TFTSLIKGYCMVKRVDDGM 388
Query: 357 ATFR---KAGTKSNSKAFAM----------------------------DVAGYNNIISRF 385
FR K G +N+ +++ DV Y ++
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVT 445
C+NG L +A +FE+L + + + T+I+ K +++DA +F + G++
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 446 NFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQ 505
+ L K + + +L KM E P+ Y +IR G L S +L+ +
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 506 VMRYGVGVTNSLREFVTEVFKKA 528
+ G S + V ++ A
Sbjct: 569 MKSCGFSADASSIKMVIDMLLSA 591
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 165/362 (45%), Gaps = 19/362 (5%)
Query: 84 RLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFH 143
R+ + + V R + A S+ +P + NAII ++ + KR N+A F
Sbjct: 155 RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA---FD 211
Query: 144 FF--FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 201
FF + I PN+V+Y ++N C+ R A L +I P+ +TY L F
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAF 270
Query: 202 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
+ G+++EA +L EM+ D + Y++LI+G +D+AN++FD + + + D
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
V T + F R ++ M ++ + R VT N L++ + G +A F Q
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 322 MLDNHTPPNFQAVNSD--TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 379
M +F ++ D T+NI++ + G+ +AL F + +D+ Y
Sbjct: 391 M-------DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM----QKREMDLDIVTYT 439
Query: 380 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDA 439
+I C+ G + EA +LF L K L PD+ T+ T++ + + ++ +M
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Query: 440 GL 441
GL
Sbjct: 500 GL 501
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 189/420 (45%), Gaps = 14/420 (3%)
Query: 86 NLHNRVQSLIRAGDLDAASSVARHSTFSSTRP--TVFTCNAIIAAMYRAKRYNEAIALFH 143
+L R+ S R D+ ++ S +RP ++ N +++A+ + K+Y+ I+L
Sbjct: 51 DLRERL-SKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGK 109
Query: 144 FFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFIS 203
I ++ ++N VIN C +V +AL + ++ + P VT L GF
Sbjct: 110 KMEVLG-IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG-YEPDRVTIGSLVNGFCR 167
Query: 204 AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 263
R+ +A+ L+ +M+ G+ D + YN +I + ++ A + F E++ + + + V
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
Query: 264 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 323
+ N+ R +A ++ ++ +T + LL+ +K+GK +A LF++M+
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 324 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 383
P+ T++ ++N + EA F SK DV YN +I+
Sbjct: 288 RMSIDPDIV-----TYSSLINGLCLHDRIDEANQMFDLM----VSKGCLADVVSYNTLIN 338
Query: 384 RFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRV 443
FC+ + + LF E+ + L + T+ TLI + + +D A + F +M G+
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 444 VTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
N + L N ++ I M +R+ D Y VIRG+C G ++++ L
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 152/381 (39%), Gaps = 46/381 (12%)
Query: 131 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 190
R + N+AI LF +S P+IV +N +++ + DV + L + +
Sbjct: 62 RDIKLNDAIDLFSDM-VKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRND 119
Query: 191 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 250
T+ + F ++ AL +L +ML G+ D + +L++GF + A L D
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 251 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 310
++ E D V ++ R +A D +K + + + VT L+ L
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 311 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 370
+ + A L M+ PN
Sbjct: 240 RWSDAARLLSDMIKKKITPN---------------------------------------- 259
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
V Y+ ++ F +NG + EA+ LFEE+ S+ PD+ T+ +LI+ +RID+A
Sbjct: 260 ----VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 431 KVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
++F MV G N + + K +V D + +M +R + Y +I+G
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 491 CAKGLLDKSLELLYQVMRYGV 511
G +DK+ E Q+ +G+
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGI 396
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 2/146 (1%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LV + + +Q +AGD+D A F P ++T N ++ +
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
+A+ +F + + +IV+Y VI C G+V+ A L+ ++ P VTY
Sbjct: 417 EKALVIFE-DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS-LSLKGLKPDIVTYT 474
Query: 196 HLTKGFISAGRIVEALDLLREMLNKG 221
+ G + G + E L +M +G
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEG 500
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 201/452 (44%), Gaps = 46/452 (10%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P++ N +++A+ + K+++ I+L + IV + +YN +IN C ++ +AL
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L ++ + PS VT L G+ RI +A+ L+ +M+ G+ D++ + LI G
Sbjct: 142 LLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 237 LELGNLDKANELFDELKER-C----LVYDGVVNA--------------TYME-------- 269
+A L D + +R C + Y VVN ME
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 270 WFFNNGRDK--------EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
FN D +A++ +K + + + VT + L+ L +G+ + A L
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
M++ PN TFN +++ GKF EA K ++ D+ YN++
Sbjct: 321 MIEKKINPNLV-----TFNALIDAFVKEGKFVEA----EKLYDDMIKRSIDPDIFTYNSL 371
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
++ FC + L +A+ +FE + SK PDV T+ TLI + K +R++D ++F M GL
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 442 RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLE 501
T + L + + + +M PD Y +++ GLC G L+K+LE
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 502 LLYQVMRYGVGVTNSLREFVTEVFKKAGRGDE 533
+ + + + + + + E KAG+ D+
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 176/418 (42%), Gaps = 50/418 (11%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V L + GD D A ++ + V N II ++ + + ++A+ LF T+
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG- 290
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN+V+Y+++I+ C GR A +L +I P+ VT+ L F+ G+ VEA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L +M+ + D YN+L++GF LDKA ++F+ + + D V T ++
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F + R ++ + ++ + R VT L++ L G A +F QM+ + PP
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP- 468
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
D+ Y+ ++ C NG
Sbjct: 469 -------------------------------------------DIMTYSILLDGLCNNGK 485
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--VVTNFC 448
L +A +F+ + + D+ + T+I+ K ++DD +F + G++ VVT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY-- 543
Query: 449 NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
N + L + + +L KM E P P+ Y +IR G S EL+ ++
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 179/398 (44%), Gaps = 17/398 (4%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P++ T ++++ KR ++A+AL + P+ +++ +I+ + A+
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L ++ P+ VTY + G G AL+LL +M AD +++N +I
Sbjct: 212 LVDRMVQRGC-QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ ++D A LF E++ + + + V ++ + + GR +A +++++
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE-CFNLGKFHEA 355
VT N L++ +K GK +A L+D M+ P+ T+N +VN C H+
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF-----TYNSLVNGFC-----MHDR 380
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
L ++ SK DV YN +I FC++ + + LF E+ + L D T+ T
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDELIKNDKVIDCAHILSKMGE 473
LI D+A KVF +MV G+ ++T + + D L N K+ + M +
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY--SILLDGLCNNGKLEKALEVFDYMQK 498
Query: 474 RDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+ K D Y +I G+C G +D +L + GV
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 145/330 (43%), Gaps = 27/330 (8%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L G AS + P + T NA+I A + ++ EA L+ +S
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS- 360
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P+I +YN+++N C R+D A +++ +++ F P VTY L KGF + R+ +
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDG 419
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV-----VNA 265
+L REM ++G D++ Y LI G G+ D A ++F + +V DGV +
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ-----MVSDGVPPDIMTYS 474
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
++ NNG+ ++A++ + + + K+ ++E + K GK W LF +
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKA---GTKSNSKAFAMDVAGYNNII 382
PN T+N M++ + EA A +K G NS YN +I
Sbjct: 535 GVKPNVV-----TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS-------GTYNTLI 582
Query: 383 SRFCENGLLSEAETLFEELCSKSLSPDVPT 412
+G + + L E+ S D T
Sbjct: 583 RAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 147/370 (39%), Gaps = 46/370 (12%)
Query: 134 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 193
+ ++AI LF +S +P+IV +N +++ + DV + L + T
Sbjct: 65 KLDDAIGLFGGM-VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYT 122
Query: 194 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
Y L F +I AL LL +M+ G+ + ++L++G+ + A L D++
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 254 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 313
E ++ +T L+ L H K +
Sbjct: 183 EM-----------------------------------GYRPDTITFTTLIHGLFLHNKAS 207
Query: 314 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 373
+A AL D+M+ PN T+ ++VN G AL K +
Sbjct: 208 EAVALVDRMVQRGCQPNLV-----TYGVVVNGLCKRGDTDLALNLLNKM----EAAKIEA 258
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
DV +N II C+ + +A LF+E+ +K + P+V T+ +LI R DA ++
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 434 HRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAK 493
M++ + N + D +K K ++ + M +R PD Y ++ G C
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 494 GLLDKSLELL 503
LDK+ ++
Sbjct: 379 DRLDKAKQMF 388
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 2/207 (0%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LVG + +Q L GD D A V + P + T + ++ + +
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
+A+ +F + +S I +I Y +I C G+VD +L+ + + P+ VTY
Sbjct: 487 EKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYN 544
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
+ G S + EA LL++M G +S YN LI L G+ + EL E++
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSC 604
Query: 256 CLVYDGVVNATYMEWFFNNGRDKEAMD 282
V D + DK +D
Sbjct: 605 RFVGDASTIGLVANMLHDGRLDKSFLD 631
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 159/351 (45%), Gaps = 11/351 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ + GD+ AAS P V T AII+ + EA LFH F +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG- 416
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ P+ V++ +IN +C G + A ++ H+I A P+ VTY L G G + A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+LL EM G + YN++++G + GN+++A +L E + L D V T M+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ +G +A + K ++ + + T VT NVL+ HG L + ML P
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP- 594
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
N+ TFN +V + A A ++ S+ D Y N++ C+
Sbjct: 595 ----NATTFNSLVKQYCIRNNLKAATAIYKDMC----SRGVGPDGKTYENLVKGHCKARN 646
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+ EA LF+E+ K S V T+ LI ++K ++ +A +VF +M GL
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 177/425 (41%), Gaps = 18/425 (4%)
Query: 92 QSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFF-FTQSN 150
Q L+ G L A V +V +CN + + + Y A A+ F F +
Sbjct: 183 QVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAIIVFREFPEVG 241
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ N+ SYN VI+ C GR+ A L ++ + P ++Y + G+ G + +
Sbjct: 242 VCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L+ M KG +S +Y ++I + L +A E F E+ + ++ D VV T ++
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F G + A + + R +T ++ + G +A LF +M P
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP- 419
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALAT---FRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
+S TF ++N G +A +AG N V Y +I C+
Sbjct: 420 ----DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN-------VVTYTTLIDGLCK 468
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNF 447
G L A L E+ L P++ T+ ++++ K I++A+K+ AGL T
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 448 CNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
+ D K+ ++ IL +M + +P + V++ G C G+L+ +LL ++
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 508 RYGVG 512
G+
Sbjct: 589 AKGIA 593
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 165/396 (41%), Gaps = 18/396 (4%)
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
+ + PN Y ++I C ++ A E + +I P V Y L GF G I
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL-PDTVVYTTLIDGFCKRGDI 367
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
A EM ++ D L Y +ISGF ++G++ +A +LF E+ + L D V
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
+ + G K+A + ++ VT L++ L K G A L +M
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISR 384
PN T+N +VN G EA + F AG + D Y ++
Sbjct: 488 QPNIF-----TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-------DTVTYTTLMDA 535
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-V 443
+C++G + +A+ + +E+ K L P + T L++ + ++D K+ + M+ G+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 444 VTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
T F + V I+N+ A I M R PD YE +++G C + ++ L
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATA-IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 504 YQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
++ G V+ S + + F K + E + D
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
++G++D A + + +PT+ T N ++ + L ++ + I PN
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNA 596
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
++N+++ +C + A +Y+ + + GP TY +L KG A + EA L +
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGV-GPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 260
EM KG Y+ LI GFL+ +A E+FD+++ L D
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 159/351 (45%), Gaps = 11/351 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ + GD+ AAS P V T AII+ + EA LFH F +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG- 416
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ P+ V++ +IN +C G + A ++ H+I A P+ VTY L G G + A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+LL EM G + YN++++G + GN+++A +L E + L D V T M+
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ +G +A + K ++ + + T VT NVL+ HG L + ML P
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP- 594
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
N+ TFN +V + A A ++ S+ D Y N++ C+
Sbjct: 595 ----NATTFNSLVKQYCIRNNLKAATAIYKDMC----SRGVGPDGKTYENLVKGHCKARN 646
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+ EA LF+E+ K S V T+ LI ++K ++ +A +VF +M GL
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 177/425 (41%), Gaps = 18/425 (4%)
Query: 92 QSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFF-FTQSN 150
Q L+ G L A V +V +CN + + + Y A A+ F F +
Sbjct: 183 QVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAIIVFREFPEVG 241
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ N+ SYN VI+ C GR+ A L ++ + P ++Y + G+ G + +
Sbjct: 242 VCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L+ M KG +S +Y ++I + L +A E F E+ + ++ D VV T ++
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F G + A + + R +T ++ + G +A LF +M P
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP- 419
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALAT---FRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
+S TF ++N G +A +AG N V Y +I C+
Sbjct: 420 ----DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN-------VVTYTTLIDGLCK 468
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNF 447
G L A L E+ L P++ T+ ++++ K I++A+K+ AGL T
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 448 CNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
+ D K+ ++ IL +M + +P + V++ G C G+L+ +LL ++
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 508 RYGVG 512
G+
Sbjct: 589 AKGIA 593
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 165/396 (41%), Gaps = 18/396 (4%)
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
+ + PN Y ++I C ++ A E + +I P V Y L GF G I
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL-PDTVVYTTLIDGFCKRGDI 367
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
A EM ++ D L Y +ISGF ++G++ +A +LF E+ + L D V
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
+ + G K+A + ++ VT L++ L K G A L +M
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISR 384
PN T+N +VN G EA + F AG + D Y ++
Sbjct: 488 QPNIF-----TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA-------DTVTYTTLMDA 535
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-V 443
+C++G + +A+ + +E+ K L P + T L++ + ++D K+ + M+ G+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 444 VTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
T F + V I+N+ A I M R PD YE +++G C + ++ L
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATA-IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 504 YQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
++ G V+ S + + F K + E + D
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
++G++D A + + +PT+ T N ++ + L ++ + I PN
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNA 596
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
++N+++ +C + A +Y+ + + GP TY +L KG A + EA L +
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGV-GPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 260
EM KG Y+ LI GFL+ +A E+FD+++ L D
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 171/388 (44%), Gaps = 46/388 (11%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P VF NA+I + R ++A + ++ + P+ V+YN +I + C G++D+AL
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK-DFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
++ +++ P+ +TY L + + G + EAL L+ EML++G D YN +I G
Sbjct: 214 KVLNQLLSDNC-QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
+ G +D+A E+ L+ + D + SY
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVI--------------------SY----------- 301
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
N+LL LL GK + L +M PN T++I++ GK EA
Sbjct: 302 ----NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV-----TYSILITTLCRDGKIEEA 352
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+ + K D Y+ +I+ FC G L A E + S PD+ + T
Sbjct: 353 MNLLKLM----KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
++ K + D AL++F ++ + G ++ N +F L + I H++ +M
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELL 503
PD Y +I LC +G++D++ ELL
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 158/352 (44%), Gaps = 11/352 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ SL G LD A V + +PTV T +I A +EA+ L ++
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG- 258
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ P++ +YN +I C EG VD A E+ R++ P ++Y L + ++ G+ E
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL-ELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L+ +M ++ + + Y+ LI+ G +++A L +KE+ L D +
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F GR A++ ++++ V N +L L K+GK QA +F ++ + PN
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
S ++N M + ++ G AL + S D YN++IS C G+
Sbjct: 438 -----SSSYNTMFSALWSSGDKIRALHMI----LEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR 442
+ EA L ++ S P V T+ ++ + K RI+DA+ V MV G R
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 139/313 (44%), Gaps = 22/313 (7%)
Query: 204 AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE----RCLVY 259
+G +E+L LL M+ KG+ D ++ LI GF L N+ KA + + L++ Y
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAY 161
Query: 260 DGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALF 319
+ ++N F R +A + + F VT N+++ L GK A +
Sbjct: 162 NALING-----FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 320 DQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 379
+Q+L ++ P T+ I++ G EAL K + S+ D+ YN
Sbjct: 217 NQLLSDNCQPTVI-----TYTILIEATMLEGGVDEAL----KLMDEMLSRGLKPDMFTYN 267
Query: 380 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDA 439
II C+ G++ A + L K PDV ++ L+ A + + ++ K+ +M
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 440 GL--RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLD 497
VVT + + L ++ K+ + ++L M E+ PD Y+ +I C +G LD
Sbjct: 328 KCDPNVVTY--SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 498 KSLELLYQVMRYG 510
++E L ++ G
Sbjct: 386 VAIEFLETMISDG 398
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 142/358 (39%), Gaps = 27/358 (7%)
Query: 161 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 220
+ + C G +L L ++ + P + L KGF + I +A+ ++ E+L K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKG-YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEK 152
Query: 221 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 280
D YN LI+GF ++ +D A + D ++ + D V + + G+ A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 281 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 340
+ L+ + T +T +L+E + G +A L D+ML P+ T+N
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF-----TYN 267
Query: 341 IMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 400
++ G A R K DV YN ++ G E E L +
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEP----DVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 401 LCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--------VVTNFCNRVF 452
+ S+ P+V T+ LI + +I++A+ + M + GL ++ FC
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC---- 379
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
+ ++ L M PD Y V+ LC G D++LE+ ++ G
Sbjct: 380 ----REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ +L R G ++ A ++ + P ++ + +IAA R R + AI +
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG- 398
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+P+IV+YN V+ T C G+ D ALE++ + P++ +Y + S+G + A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKL-GEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L ++ EM++ G D + YN++IS G +D+A EL +++ C
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS-C-------------- 502
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+F + VT N++L K + A + + M+ N PN
Sbjct: 503 --------------------EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 1/170 (0%)
Query: 381 IISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
I R C +G E+ L E + K +PDV LI + + I A++V + G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 441 LRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSL 500
V + N + + K +++ D +L +M +D PD Y ++I LC++G LD +L
Sbjct: 155 QPDVFAY-NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 501 ELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPPQL 550
++L Q++ T + E G DE +L+D R P +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDM 263
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 85 LNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHF 144
+N + + +L + G D A + P + N + +A++ + + I H
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS---GDKIRALHM 460
Query: 145 FF--TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFI 202
+ I P+ ++YN++I+ C EG VD A EL + + F PS VTY + GF
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM-RSCEFHPSVVTYNIVLLGFC 519
Query: 203 SAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 252
A RI +A+++L M+ G + Y LI G G +A EL ++L
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 188/447 (42%), Gaps = 47/447 (10%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ SL+RA + A P V+ I A + + EA+ LF ++
Sbjct: 233 LTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM-EEAG 290
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ PN+V++N VI+ GR D A +++ + P+ +TY L KG A RI +A
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+L+EM KG + +VYNNLI F+E G+L+KA E+ D + + L T ++
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKM-----TPVTC-------------------------- 299
+ NG+ A K ++ F + T V C
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 300 ----NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
L+ L KHGK ++A L+ Q L+ V++ T N +++ GK EA
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGF-----VVDTRTSNALLHGLCEAGKLDEA 524
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+ + + MD YN +IS C L EA +E+ + L PD T+
Sbjct: 525 F----RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
LI M ++++A++ + G+ + + D K ++ + +M ++
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLEL 502
+P+ Y +IR C G L +LEL
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALEL 667
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/507 (21%), Positives = 212/507 (41%), Gaps = 76/507 (14%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L G D A PT+ T + ++ + RAKR +A + T+
Sbjct: 302 IDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM-TKKG 360
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
PN++ YNN+I++ + G ++ A+E+ + ++ + ++ TY L KG+ G+ A
Sbjct: 361 FPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 211 LDLLREMLNKGHGADS-------------LVYNN----------------------LISG 235
LL+EML+ G + L++++ LISG
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
+ G KA EL+ + + V D + + G+ EA K ++ R M
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
V+ N L+ K +A+ D+M+ P+ + T++I++ FN+ K EA
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD-----NYTYSILICGLFNMNKVEEA 594
Query: 356 LATF---RKAGTKSNSKAFAMDVAG----------------------------YNNIISR 384
+ + ++ G + +++ + G YN++I
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVV 444
+C +G LS A L E++ K +SP+ T+ +LI + R+++A +F M GL
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 445 TNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLY 504
+ D K +++ +L +M ++ P+ Y V+I G G + ++ LL
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 505 QVMRYGVGVTNSL--REFVTEVFKKAG 529
++ G+ V +S+ +EF+ K+ G
Sbjct: 775 EMREKGI-VPDSITYKEFIYGYLKQGG 800
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 137/333 (41%), Gaps = 20/333 (6%)
Query: 210 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV-----VN 264
ALD+ + NKG N L++ + K E FD +V GV +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD------VVCKGVSPDVYLF 263
Query: 265 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
T + F G+ +EA+ + + + VT N +++ L G+ +A+ ++M++
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
P T++I+V + +A ++ K F +V YNN+I
Sbjct: 324 RGMEPTLI-----TYSILVKGLTRAKRIGDAYFVLKEM----TKKGFPPNVIVYNNLIDS 374
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVV 444
F E G L++A + + + SK LS T+ TLI Y K + D+A ++ M+ G V
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 445 TNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLY 504
V L + + +M R+ P +I GLC G K+LEL +
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 505 QVMRYGVGVTNSLREFVTEVFKKAGRGDEIERL 537
Q + G V + +AG+ DE R+
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 139/338 (41%), Gaps = 38/338 (11%)
Query: 125 IIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT 184
+I+ + + ++++A+ L+ F + +V S N +++ C+ G++D A + + I+
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTS-NALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 185 APFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDK 244
V+Y L G ++ EA L EM+ +G D+ Y+ LI G + +++
Sbjct: 535 GCV-MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 245 ANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLE 304
A + +D+ K ++ D + ++ R +E + + +M + + V N L+
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 305 VLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF---RK 361
+ G+ + A L + M PN S T+ ++ + + EA F R
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPN-----SATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 362 AGTKSNSKAFAMDVAGYNNI----------------------------ISRFCENGLLSE 393
G + N + + GY + I + +G ++E
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 394 AETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALK 431
A L E+ K + PD T++ I Y+K + +A K
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 40/204 (19%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P V+T + +I +A+R E F ++ N+ PN V YN++I +C GR+ +ALE
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA----------------------LD-- 212
L R + P++ TY L KG R+ EA +D
Sbjct: 667 L-REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 213 -----------LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
LLREM +K + + Y +I G+ GN+ +A+ L +E++E+ +V D
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 262 VVNATYMEWFFNNGRDKEAMDSYK 285
+ TY E+ + + ++++K
Sbjct: 786 I---TYKEFIYGYLKQGGVLEAFK 806
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
T NI++ +F + F K + DV + I+ FC+ G + EA L
Sbjct: 228 TCNILLTSLVRANEFQKCCEAFDVV-----CKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
F ++ ++P+V T T+ID R D+A +MV+ G+ + + L +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSL 517
++ D +L +M ++ P+ Y +I G L+K++E+ ++ G+ +T+S
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 518 REFVTEVFKKAGRGDEIERLL 538
+ + + K G+ D ERLL
Sbjct: 403 YNTLIKGYCKNGQADNAERLL 423
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+++ R+G L A + P T ++I M R EA LF
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEG 710
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ PN+ Y +I+ + G++ V +E + + P+ +TY + G+ G + EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 251
LL EM KG DS+ Y I G+L+ G + +A + DE
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 188/447 (42%), Gaps = 47/447 (10%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ SL+RA + A P V+ I A + + EA+ LF ++
Sbjct: 233 LTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM-EEAG 290
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ PN+V++N VI+ GR D A +++ + P+ +TY L KG A RI +A
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+L+EM KG + +VYNNLI F+E G+L+KA E+ D + + L T ++
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKM-----TPVTC-------------------------- 299
+ NG+ A K ++ F + T V C
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 300 ----NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
L+ L KHGK ++A L+ Q L+ V++ T N +++ GK EA
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGF-----VVDTRTSNALLHGLCEAGKLDEA 524
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+ + + MD YN +IS C L EA +E+ + L PD T+
Sbjct: 525 F----RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
LI M ++++A++ + G+ + + D K ++ + +M ++
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLEL 502
+P+ Y +IR C G L +LEL
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALEL 667
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/507 (21%), Positives = 212/507 (41%), Gaps = 76/507 (14%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L G D A PT+ T + ++ + RAKR +A + T+
Sbjct: 302 IDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM-TKKG 360
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
PN++ YNN+I++ + G ++ A+E+ + ++ + ++ TY L KG+ G+ A
Sbjct: 361 FPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 211 LDLLREMLNKGHGADS-------------LVYNN----------------------LISG 235
LL+EML+ G + L++++ LISG
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
+ G KA EL+ + + V D + + G+ EA K ++ R M
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
V+ N L+ K +A+ D+M+ P+ + T++I++ FN+ K EA
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD-----NYTYSILICGLFNMNKVEEA 594
Query: 356 LATF---RKAGTKSNSKAFAMDVAG----------------------------YNNIISR 384
+ + ++ G + +++ + G YN++I
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVV 444
+C +G LS A L E++ K +SP+ T+ +LI + R+++A +F M GL
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 445 TNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLY 504
+ D K +++ +L +M ++ P+ Y V+I G G + ++ LL
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 505 QVMRYGVGVTNSL--REFVTEVFKKAG 529
++ G+ V +S+ +EF+ K+ G
Sbjct: 775 EMREKGI-VPDSITYKEFIYGYLKQGG 800
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 137/333 (41%), Gaps = 20/333 (6%)
Query: 210 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV-----VN 264
ALD+ + NKG N L++ + K E FD +V GV +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD------VVCKGVSPDVYLF 263
Query: 265 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
T + F G+ +EA+ + + + VT N +++ L G+ +A+ ++M++
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
P T++I+V + +A ++ K F +V YNN+I
Sbjct: 324 RGMEPTLI-----TYSILVKGLTRAKRIGDAYFVLKEM----TKKGFPPNVIVYNNLIDS 374
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVV 444
F E G L++A + + + SK LS T+ TLI Y K + D+A ++ M+ G V
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 445 TNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLY 504
V L + + +M R+ P +I GLC G K+LEL +
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 505 QVMRYGVGVTNSLREFVTEVFKKAGRGDEIERL 537
Q + G V + +AG+ DE R+
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 139/338 (41%), Gaps = 38/338 (11%)
Query: 125 IIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT 184
+I+ + + ++++A+ L+ F + +V S N +++ C+ G++D A + + I+
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTS-NALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 185 APFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDK 244
V+Y L G ++ EA L EM+ +G D+ Y+ LI G + +++
Sbjct: 535 GCV-MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 245 ANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLE 304
A + +D+ K ++ D + ++ R +E + + +M + + V N L+
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 305 VLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF---RK 361
+ G+ + A L + M PN S T+ ++ + + EA F R
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPN-----SATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 362 AGTKSNSKAFAMDVAGYNNI----------------------------ISRFCENGLLSE 393
G + N + + GY + I + +G ++E
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 394 AETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALK 431
A L E+ K + PD T++ I Y+K + +A K
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 40/204 (19%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P V+T + +I +A+R E F ++ N+ PN V YN++I +C GR+ +ALE
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA----------------------LD-- 212
L R + P++ TY L KG R+ EA +D
Sbjct: 667 L-REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 213 -----------LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
LLREM +K + + Y +I G+ GN+ +A+ L +E++E+ +V D
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 262 VVNATYMEWFFNNGRDKEAMDSYK 285
+ TY E+ + + ++++K
Sbjct: 786 I---TYKEFIYGYLKQGGVLEAFK 806
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
T NI++ +F + F K + DV + I+ FC+ G + EA L
Sbjct: 228 TCNILLTSLVRANEFQKCCEAFDVV-----CKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
F ++ ++P+V T T+ID R D+A +MV+ G+ + + L +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSL 517
++ D +L +M ++ P+ Y +I G L+K++E+ ++ G+ +T+S
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 518 REFVTEVFKKAGRGDEIERLL 538
+ + + K G+ D ERLL
Sbjct: 403 YNTLIKGYCKNGQADNAERLL 423
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+++ R+G L A + P T ++I M R EA LF
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEG 710
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ PN+ Y +I+ + G++ V +E + + P+ +TY + G+ G + EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 251
LL EM KG DS+ Y I G+L+ G + +A + DE
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 160/350 (45%), Gaps = 11/350 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V L + GD D A ++ P V N II + + K ++A+ LF T+
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG- 286
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN+V+Y+++I+ C+ GR A L +I P T+ L F+ G++VEA
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEA 345
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L EM+ + + Y++LI+GF LD+A ++F+ + + D V T ++
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F R +E M+ ++ + R VT N+L++ L + G A +F +M+ + PPN
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
T+N +++ GK +A+ F + YN +I C+ G
Sbjct: 466 IM-----TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT----IYTYNIMIEGMCKAGK 516
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
+ + LF L K + PDV + T+I + + ++A +F M + G
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 166/379 (43%), Gaps = 11/379 (2%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P T N +I ++ + +EA+AL + P++V+Y V+N C G D+A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
L + P + Y + G + +AL+L +EM KG + + Y++LIS
Sbjct: 242 NLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G A+ L ++ ER + D + ++ F G+ EA Y ++ R +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
VT + L+ H + +A +F+ M+ H P+ T+N ++ + E
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV-----TYNTLIKGFCKYKRVEEG 415
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+ FR+ + + + YN +I + G A+ +F+E+ S + P++ T+ T
Sbjct: 416 MEVFREM----SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
L+D K +++ A+ VF + + + N + + + K KV D + + +
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 476 PKPDPTCYEVVIRGLCAKG 494
KPD Y +I G C KG
Sbjct: 532 VKPDVVAYNTMISGFCRKG 550
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 179/381 (46%), Gaps = 10/381 (2%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
PNIV+ ++++N +C R+ A+ L + T + P+ VT+ L G + EA+
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L+ M+ KG D + Y +++G + G+ D A L +++++ L ++ T ++
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
+A++ +K + + + VT + L+ L +G+ + A L M++ P+
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
TF+ +++ GK EA + + +S + + Y+++I+ FC + L
Sbjct: 328 -----TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS----IVTYSSLINGFCMHDRLD 378
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
EA+ +FE + SK PDV T+ TLI + K +R+++ ++VF M GL T N +
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG 512
L + I +M P+ Y ++ GLC G L+K++ + + R +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 513 VTNSLREFVTEVFKKAGRGDE 533
T + E KAG+ ++
Sbjct: 499 PTIYTYNIMIEGMCKAGKVED 519
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 175/397 (44%), Gaps = 15/397 (3%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P + T ++++ +KR +EA+AL F + PN V++N +I+ + A+
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFV-TGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L ++A P VTY + G G A +LL +M L+YN +I G
Sbjct: 208 LIDRMVAKGC-QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ ++D A LF E++ + + + V ++ + N GR +A +++R+
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
T + L++ +K GK +A L+D+M+ P+ T++ ++N + EA
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV-----TYSSLINGFCMHDRLDEAK 381
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
F +K F DV YN +I FC+ + E +F E+ + L + T+ L
Sbjct: 382 QMFEFMVSK---HCFP-DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 417 IDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
I + D A ++F MV G+ ++T N + D L KN K+ + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY--NTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 475 DPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+P Y ++I G+C G ++ +L + GV
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 142/336 (42%), Gaps = 10/336 (2%)
Query: 168 EGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSL 227
E ++D A+ L+ ++ + PF PS + + L + + L +M N G +
Sbjct: 59 ELKLDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 228 VYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSL 287
Y+ LI+ F L A + ++ + + V ++ + + ++ R EA+ +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 288 MDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECF 347
++ VT N L+ L H K ++A AL D+M+ P+ T+ ++VN
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV-----TYGVVVNGLC 232
Query: 348 NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 407
G A K V YN II C+ + +A LF+E+ +K +
Sbjct: 233 KRGDTDLAFNLLNKM----EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 408 PDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHI 467
P+V T+ +LI R DA ++ M++ + + + D +K K+++ +
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 468 LSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
+M +R P Y +I G C LD++ ++
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 2/178 (1%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LVG + + +Q L +AGD D A + + P + T N ++ + + +
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
+A+ +F + +S + P I +YN +I C G+V+ +L+ + ++ P V Y
Sbjct: 483 EKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVKPDVVAYN 540
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
+ GF G EA L +EM G +S YN LI L G+ + + EL E++
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/365 (18%), Positives = 137/365 (37%), Gaps = 45/365 (12%)
Query: 188 GPSAVTYRH-LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKAN 246
G ++ YR L++ +S ++ +A+ L EM+ + ++ L+S ++ D
Sbjct: 42 GKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVI 101
Query: 247 ELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 306
L ++++ + ++ + + F + A+ +M ++ VT + LL
Sbjct: 102 SLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGY 161
Query: 307 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 366
+ ++A AL DQM PN + TFN +++ F K EA+A
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPN-----TVTFNTLIHGLFLHNKASEAMA--------- 207
Query: 367 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERI 426
L + + +K PD+ T+ +++ K
Sbjct: 208 ------------------------------LIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 427 DDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVV 486
D A + ++M L N + D L K + D ++ +M + +P+ Y +
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 487 IRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRYR 546
I LC G + LL ++ + + + F K G+ E E+L D R
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 547 PPQLT 551
P +
Sbjct: 358 DPSIV 362
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 129 bits (324), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 162/350 (46%), Gaps = 11/350 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V L + GD+D A S+ + V II A+ K N+A+ LF
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM-DNKG 285
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN+V+YN++I C+ GR A L +I P+ VT+ L F+ G++VEA
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEA 344
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L EM+ + D Y++LI+GF LD+A +F+ + + + V T ++
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F R +E M+ ++ + R VT N L++ L + G A +F +M+ + PP+
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
T++I+++ GK +AL F KS + D+ YN +I C+ G
Sbjct: 465 II-----TYSILLDGLCKYGKLEKALVVFEYL-QKSKMEP---DIYTYNIMIEGMCKAGK 515
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
+ + LF L K + P+V + T+I + + ++A +F M + G
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 167/348 (47%), Gaps = 10/348 (2%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+IV+ ++++N +C R+ A+ L + + P+ VT+ L G + EA+
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVM-EYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L+ M+ +G D Y +++G + G++D A L ++++ + D V+ T ++
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
N +A++ + + ++ + VT N L+ L +G+ + A L M++ PN
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
TF+ +++ GK EA + + +S D+ Y+++I+ FC + L
Sbjct: 327 -----TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP----DIFTYSSLINGFCMHDRLD 377
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
EA+ +FE + SK P+V T+ TLI + K +R+++ +++F M GL T N +
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSL 500
L + I KM PD Y +++ GLC G L+K+L
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 149/335 (44%), Gaps = 52/335 (15%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
++ L G AS + P V T +A+I A + + EA L+ +S
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS- 355
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P+I +Y+++IN C R+D A ++ +I+ F P+ VTY L KGF A R+ E
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEEG 414
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++L REM +G +++ YN LI G + G+ D A ++F + +V DGV
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK-----MVSDGV-------- 461
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTP---VTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
P +T ++LL+ L K+GK +A +F+ + +
Sbjct: 462 -------------------------PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
P+ T+NIM+ GK + F + K +V Y +IS FC
Sbjct: 497 EPDIY-----TYNIMIEGMCKAGKVEDGWDLF----CSLSLKGVKPNVIIYTTMISGFCR 547
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMK 422
GL EA+ LF E+ P+ T+ TLI A ++
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 173/393 (44%), Gaps = 12/393 (3%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P T N +I ++ + +EA+AL + P++ +Y V+N C G +D+AL
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
L + + V Y + + + +AL+L EM NKG + + YN+LI
Sbjct: 241 SLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G A+ L ++ ER + + V + ++ F G+ EA Y ++ R
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
T + L+ H + +A +F+ M+ PN T+N ++ + E
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV-----TYNTLIKGFCKAKRVEEG 414
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+ FR+ + + + YN +I + G A+ +F+++ S + PD+ T+
Sbjct: 415 MELFREM----SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
L+D K +++ AL VF + + + N + + + K KV D + + +
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
KP+ Y +I G C KGL +++ + L++ M+
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEA-DALFREMK 562
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 175/397 (44%), Gaps = 15/397 (3%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P + T ++++ KR +EA+AL F PN V++N +I+ + A+
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVME-YQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L ++A P TY + G G I AL LL++M AD ++Y +I
Sbjct: 207 LIDRMVARGC-QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
N++ A LF E+ + + + V + + N GR +A +++R+
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
VT + L++ +K GK +A L+D+M+ P+ T++ ++N + EA
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-----TYSSLINGFCMHDRLDEAK 380
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
F +K F +V YN +I FC+ + E LF E+ + L + T+ TL
Sbjct: 381 HMFELMISKD---CFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 417 IDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
I + D A K+F +MV G+ ++T + + D L K K+ + + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY--SILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 475 DPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+PD Y ++I G+C G ++ +L + GV
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 176/425 (41%), Gaps = 63/425 (14%)
Query: 170 RVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVY 229
++D A++L+ ++ + P PS V + L + + L M N D Y
Sbjct: 60 KLDDAVDLFGEMVQSRPL-PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 230 NNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 289
N LI+ F L A + ++ + D V ++ + + + R EA+ +L+D
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV----ALVD 174
Query: 290 RQFKM----TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE 345
+ F M VT N L+ L H K ++A AL D+M+ P+ T+ +VN
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF-----TYGTVVNG 229
Query: 346 CFNLGKFHEALATFRKAG-------------------------------TKSNSKAFAMD 374
G AL+ +K T+ ++K +
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 375 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFH 434
V YN++I C G S+A L ++ + ++P+V T LIDA++K ++ +A K++
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 435 RMVDAGL--------RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVV 486
M+ + ++ FC +D++ + H+ M +D P+ Y +
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFC--------MHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 487 IRGLCAKGLLDKSLELLYQVMRYG-VGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRY 545
I+G C +++ +EL ++ + G VG T + + +F +AG D +++
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF-QAGDCDMAQKIFKKMVSDG 460
Query: 546 RPPQL 550
PP +
Sbjct: 461 VPPDI 465
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LVG + + +Q L +AGD D A + + P + T + ++ + + +
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
+A+ +F + +S + P+I +YN +I C G+V+ +L+ ++ P+ + Y
Sbjct: 482 EKALVVFE-YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVIIYT 539
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
+ GF G EA L REM G +S YN LI L G+ + EL E++
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS- 598
Query: 256 C--------------LVYDGVVNATYMEWF 271
C +++DG + +Y+E
Sbjct: 599 CGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 300 NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF 359
NVLL++ K A LF +M+ + P+ FN +++ + KF ++
Sbjct: 54 NVLLDL-----KLDDAVDLFGEMVQSRPLPSIVE-----FNKLLSAIAKMNKFDLVISL- 102
Query: 360 RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDA 419
G + + + D+ YN +I+ FC L A + ++ PD+ T +L++
Sbjct: 103 ---GERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG 159
Query: 420 YMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPD 479
Y +RI +A+ + +M + T N + L ++K + ++ +M R +PD
Sbjct: 160 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD 219
Query: 480 PTCYEVVIRGLCAKGLLDKSLELLYQV 506
Y V+ GLC +G +D +L LL ++
Sbjct: 220 LFTYGTVVNGLCKRGDIDLALSLLKKM 246
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 182/396 (45%), Gaps = 23/396 (5%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQS----NIVPNIVSYNNVINTHCDEGRVD 172
P++ ++ A +RY I +F+Q I ++ S+ +I+ C R+
Sbjct: 69 PSIVDFTRLLTATANLRRYETVI-----YFSQKMELYGISHDLYSFTILIHCFCRCSRLS 123
Query: 173 VALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNL 232
AL + ++ + PS VT+ L GF RI +A L+ M+ G+ + +VYN L
Sbjct: 124 FALSVLGKMMKLG-YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL 182
Query: 233 ISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 292
I G + G L+ A EL +E++++ L D V T + +GR +A + +M R
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242
Query: 293 KMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKF 352
VT L++V +K G +A L+ +M+ + P N+ T+N ++N G+
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP-----NNVTYNSIINGLCMHGRL 297
Query: 353 HEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 412
++A TF SK +V YN +IS FC+ ++ E LF+ + + + D+ T
Sbjct: 298 YDAKKTFDLMA----SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 413 HRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR--VFDELIKNDKVIDCAHILSK 470
+ TLI Y ++ ++ AL +F MV RV + + L N ++
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSR--RVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 471 MGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
M E + Y ++I GLC ++K+ EL ++
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRL 447
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 159/389 (40%), Gaps = 52/389 (13%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ R L A SV P++ T +++ R +A +L +S
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV-ILMVKSG 171
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
PN+V YN +I+ C G +++ALEL + G VTY L G +GR +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEM-EKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL-----VYDGVVNA 265
+LR+M+ + D + + LI F++ GNLD+A EL+ E+ + + Y+ ++N
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
M +GR +A ++ + + VT N L+ K + LF +M
Sbjct: 291 LCM-----HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM--- 342
Query: 326 HTPPNFQAVNSD--TFNIMVNECFNLGKFHEALATF-----RKA------------GTKS 366
+ + N+D T+N +++ +GK AL F R+ G
Sbjct: 343 ----SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 367 NSKAFA--------------MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 412
N + + + + YN +I C+ + +A LF L + + PD T
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 413 HRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+ +I K +A ++ RM + G+
Sbjct: 459 YTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 9/223 (4%)
Query: 315 AWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMD 374
A+ALF +M+ H+ P V+ F ++ NL ++ E + F + K + D
Sbjct: 55 AFALFFEMV--HSQPLPSIVD---FTRLLTATANLRRY-ETVIYFSQ---KMELYGISHD 105
Query: 375 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFH 434
+ + +I FC LS A ++ ++ P + T +L+ + + RI DA +
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 435 RMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKG 494
MV +G N + D L KN ++ +L++M ++ D Y ++ GLC G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 495 LLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERL 537
+ +L +M+ + + +VF K G DE + L
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 206/472 (43%), Gaps = 36/472 (7%)
Query: 55 AIRPPLQHSPSRDPNAPRLPDSTSALV---------GPRLNLHNRVQSLIRAGDLDAASS 105
+ L S RD + P T+ L+ P +N V ++ +G+ ++
Sbjct: 143 VFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAA 202
Query: 106 VARHSTFSSTRP-TVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINT 164
+ S P T+FT ++ A + A++L T+ VPN V Y +I++
Sbjct: 203 NVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM-TKHGCVPNSVIYQTLIHS 261
Query: 165 HCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA 224
RV+ AL+L + P A T+ + G RI EA ++ ML +G
Sbjct: 262 LSKCNRVNEALQLLEEMFLMGCV-PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 225 DSLVYNNLISGFLELGNLDKANELFDEL-KERCLVYDGVVNATYMEWFFNNGRDKEAMDS 283
D + Y L++G ++G +D A +LF + K ++++ +++ F +GR +A +
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG-----FVTHGRLDDA-KA 374
Query: 284 YKSLMDRQFKMTPVTC--NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNI 341
S M + + P C N L+ K G A + M + PN ++ I
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVY-----SYTI 429
Query: 342 MVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 398
+V+ LGK EA L G K N+ G+N +IS FC+ + EA +F
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNT-------VGFNCLISAFCKEHRIPEAVEIF 482
Query: 399 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKN 458
E+ K PDV T +LI +++ I AL + M+ G+ T N + + ++
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 459 DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
++ + ++++M + D Y +I+GLC G +DK+ L +++R G
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 185/408 (45%), Gaps = 14/408 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L + G +DAA + + +P + N +I R ++A A+ T
Sbjct: 329 MNGLCKIGRVDAAKDLF----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
IVP++ +YN++I + EG V +ALE+ H + P+ +Y L GF G+I EA
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVL-HDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++L EM G +++ +N LIS F + + +A E+F E+ + D + +
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
K A+ + ++ VT N L+ L+ G+ +A L ++M+ +P
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP-- 561
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
++ T+N ++ G+ +A + F K ++ + N +I+ C +G+
Sbjct: 562 ---LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS----NISCNILINGLCRSGM 614
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
+ EA +E+ + +PD+ T +LI+ + RI+D L +F ++ G+ T N
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 451 VFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDK 498
+ L K V D +L + E P+ + ++++ + + LD+
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 176/422 (41%), Gaps = 16/422 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ SL + ++ A + P T N +I + + R NEA + + +
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG- 317
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
P+ ++Y ++N C GRVD A +L+ I P P V + L GF++ GR+ +A
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----P-KPEIVIFNTLIHGFVTHGRLDDA 372
Query: 211 LDLLREMLNK-GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 269
+L +M+ G D YN+LI G+ + G + A E+ +++ + + ++
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
F G+ EA + + K V N L+ K + +A +F +M P
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
+ TFN +++ + + AL R S+ + YN +I+ F G
Sbjct: 493 DVY-----TFNSLISGLCEVDEIKHALWLLRDM----ISEGVVANTVTYNTLINAFLRRG 543
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCN 449
+ EA L E+ + D T+ +LI + +D A +F +M+ G CN
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 450 RVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRY 509
+ + L ++ V + +M R PD + +I GLC G ++ L + ++
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 510 GV 511
G+
Sbjct: 664 GI 665
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 169/426 (39%), Gaps = 49/426 (11%)
Query: 114 STRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDV 173
S PT + N ++ + + A +F+ ++ I P + ++ V+ C +D
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK-IPPTLFTFGVVMKAFCAVNEIDS 235
Query: 174 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI 233
AL L R + P++V Y+ L R+ EAL LL EM G D+ +N++I
Sbjct: 236 ALSLLRDMTKHGCV-PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 294
Query: 234 SGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK 293
G + +++A ++ + + R D + M GR +D+ K L R K
Sbjct: 295 LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR----VDAAKDLFYRIPK 350
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 353
V N L+ + HG+ A A+ M+
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMV------------------------------ 380
Query: 354 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
S DV YN++I + + GL+ A + ++ +K P+V ++
Sbjct: 381 -------------TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGE 473
L+D + K+ +ID+A V + M GL+ T N + K ++ + I +M
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 474 RDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDE 533
+ KPD + +I GLC + +L LL ++ GV + F + G E
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 534 IERLLD 539
+L++
Sbjct: 548 ARKLVN 553
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 4/254 (1%)
Query: 103 ASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVI 162
A + R +P V+T N++I+ + A+ L ++ +V N V+YN +I
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG-VVANTVTYNTLI 536
Query: 163 NTHCDEGRVDVALELYRHII-ATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG 221
N G + A +L ++ +P +TY L KG AG + +A L +ML G
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPL--DEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 222 HGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAM 281
H ++ N LI+G G +++A E E+ R D V + + GR ++ +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 282 DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNI 341
++ L VT N L+ L K G A L D+ +++ PN + + +I
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Query: 342 MVNECFNLGKFHEA 355
+ E + +F+ A
Sbjct: 715 IPQETLDRRRFYNA 728
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 186/430 (43%), Gaps = 19/430 (4%)
Query: 113 SSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD 172
S RP+ F I A + + + LF+ I P++ YN +I+ C R++
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM-KHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 173 VALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLV-YNN 231
A +L+ ++A PS +TY L G+ AG ++ + RE + H SL+ +N
Sbjct: 232 DAEQLFDEMLARRLL-PSLITYNTLIDGYCKAGNPEKSFKV-RERMKADHIEPSLITFNT 289
Query: 232 LISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ 291
L+ G + G ++ A + E+K+ V D + + + +N + + A+ Y++ +D
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 292 FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 351
KM TC++LL L K GK +A + + + P N +N M++ G
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP-----NEVIYNTMIDGYCRKGD 404
Query: 352 FHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 408
A + K G K + A YN +I RFCE G + AE ++ K +SP
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLA-------YNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457
Query: 409 DVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHIL 468
V T+ LI Y + D + M D G + + L K K+++ +
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 469 SKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKA 528
M +R P Y ++I G C+KG ++ + ++++ G+ + + +
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 529 GRGDEIERLL 538
G+ E E LL
Sbjct: 578 GKLSEAEDLL 587
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 199/477 (41%), Gaps = 39/477 (8%)
Query: 85 LNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHF 144
+ + ++ L +AG ++ A +V + P FT +I+ Y + EA +
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF-SILFDGYSSNEKAEAALGVYE 343
Query: 145 FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 204
S + N + + ++N C EG+++ A E+ +A P+ V Y + G+
Sbjct: 344 TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG-LVPNEVIYNTMIDGYCRK 402
Query: 205 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL-----VY 259
G +V A + M +G D L YN LI F ELG ++ A + +++K + + Y
Sbjct: 403 GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 260 DGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALF 319
+ ++ ++ F+ + D K + D V+ L+ L K K +A +
Sbjct: 463 NILIGGYGRKYEFD-----KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 320 DQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 379
M D P + +N++++ C + GK +A F K K K +++ YN
Sbjct: 518 RDMEDRGVSPKVR-----IYNMLIDGCCSKGKIEDAF-RFSKEMLK---KGIELNLVTYN 568
Query: 380 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDA 439
+I G LSEAE L E+ K L PDV T+ +LI Y + + ++ M +
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 440 GLR-------VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCA 492
G++ ++ + C + EL + GE KPD Y V+
Sbjct: 629 GIKPTLKTYHLLISLCTKEGIELTER-----------LFGEMSLKPDLLVYNGVLHCYAV 677
Query: 493 KGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPPQ 549
G ++K+ L Q++ +G+ + + K G+ E+ L+D R P+
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 146/357 (40%), Gaps = 53/357 (14%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
R + D + + + T P V + +I + + + EA + + P +
Sbjct: 471 RKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA-QIVKRDMEDRGVSPKV 529
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
YN +I+ C +G+++ A + ++ + VTY L G G++ EA DLL
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKG-IELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK---------------------- 253
E+ KG D YN+LISG+ GN+ + L++E+K
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Query: 254 ----ERC----------LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTC 299
ER LVY+GV++ + +G ++A + K ++++ + T
Sbjct: 649 IELTERLFGEMSLKPDLLVYNGVLHC-----YAVHGDMEKAFNLQKQMIEKSIGLDKTTY 703
Query: 300 NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF 359
N L+ LK GK + +L D+M P +DT+NI+V + + A +
Sbjct: 704 NSLILGQLKVGKLCEVRSLIDEMNAREMEPE-----ADTYNIIVKGHCEVKDYMSAYVWY 758
Query: 360 RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
R+ K F +DV N ++S E EAE + E+ + L DV L
Sbjct: 759 REM----QEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLG-DVTVDEDL 810
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 82 GPRLNL---HNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEA 138
G LNL + + L G L A + + +P VFT N++I+ A
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRC 618
Query: 139 IALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLT 198
IAL+ +S I P + +Y+ +I+ EG +EL + P + Y +
Sbjct: 619 IALYEEM-KRSGIKPTLKTYHLLISLCTKEG-----IELTERLFGEMSLKPDLLVYNGVL 672
Query: 199 KGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
+ G + +A +L ++M+ K G D YN+LI G L++G L + L DE+ R
Sbjct: 673 HCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 190/459 (41%), Gaps = 58/459 (12%)
Query: 87 LHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
+H +Q ++ + A + S F + VF CN I++ + + + +EA L
Sbjct: 412 VHTIIQGWLKGQKHEEALKLFDES-FETGLANVFVCNTILSWLCKQGKTDEATELLSKME 470
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 206
++ I PN+VSYNNV+ HC + +D+A ++ +I+ P+ TY L G
Sbjct: 471 SRG-IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG-LKPNNYTYSILIDGCFRNHD 528
Query: 207 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER------CLVYD 260
AL+++ M + + +VY +I+G ++G KA EL + E C+ Y+
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 261 GVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD 320
+++ FF G A+ +Y+ + +T L+ L K+ + QA + D
Sbjct: 589 SIIDG-----FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 321 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN 380
+M +K +D+ Y
Sbjct: 644 EM--------------------------------------------KNKGVKLDIPAYGA 659
Query: 381 IISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
+I FC+ + A LF EL + L+P P + +LI + + + AL ++ +M+ G
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG 719
Query: 441 LRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSL 500
LR + D L+K+ +I + + ++M PD Y V++ GL KG K +
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVV 779
Query: 501 ELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
++ ++ + V + V + G DE RL D
Sbjct: 780 KMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHD 818
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 145/336 (43%), Gaps = 28/336 (8%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ R D A V H T S+ II + + + ++A L +
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 579
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ + +SYN++I+ EG +D A+ Y + P+ +TY L G R+ +A
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG-ISPNVITYTSLMNGLCKNNRMDQA 638
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL-----VYDGVVNA 265
L++ EM NKG D Y LI GF + N++ A+ LF EL E L +Y+ +++
Sbjct: 639 LEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISG 698
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
F N G A+D YK ++ + T L++ LLK G A L+ +M
Sbjct: 699 -----FRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM--- 750
Query: 326 HTPPNFQAV----NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
QAV + + ++VN G+F + + F + K N+ +V YN +
Sbjct: 751 ------QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE--MKKNN--VTPNVLIYNAV 800
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
I+ G L EA L +E+ K + PD T L+
Sbjct: 801 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 170/455 (37%), Gaps = 96/455 (21%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+ + Y+ + C + +A L R + PS TY + + G + +A+
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L EML+ G + + +LI+G + +L A LFD++++ + V + +EWF
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 273 NNGRDKEAMDSYK-------------------------------SLMDRQFKM---TPVT 298
NG ++A++ YK L D F+
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFV 445
Query: 299 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD--------------------- 337
CN +L L K GK +A L +M PN + N+
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL 505
Query: 338 ---------TFNIMVNECFNLGKFHEALATFR----------------------KAGTKS 366
T++I+++ CF AL K G S
Sbjct: 506 EKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565
Query: 367 NS----------KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
+ K + YN+II F + G + A +EE+C +SP+V T+ +L
Sbjct: 566 KARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625
Query: 417 IDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDP 476
++ K R+D AL++ M + G+++ + D K + + + S++ E
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 477 KPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
P Y +I G G + +L+L ++++ G+
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGL 720
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 174/417 (41%), Gaps = 48/417 (11%)
Query: 123 NAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHII 182
N ++ A + ++ + A+ + + + +++P N ++ + A ELY ++
Sbjct: 167 NYLLNAYSKDRQTDHAVDIVNQML-ELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 183 ATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNL 242
A G + VT + L + + + EAL++L + +G DSL+Y+ + + +L
Sbjct: 226 AIGVDGDN-VTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284
Query: 243 DKANELFDELKERCL------VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
AN L E+KE+ L Y V+ A+ + G +A+ ++ M
Sbjct: 285 AMANSLLREMKEKKLCVPSQETYTSVILASVKQ-----GNMDDAIRLKDEMLSDGISMNV 339
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
V L+ K+ A LFD+M P NS TF++++ G+ +AL
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSP-----NSVTFSVLIEWFRKNGEMEKAL 394
Query: 357 ATFRK---------------------------AGTKSNSKAFAMDVAGY---NNIISRFC 386
++K K ++F +A N I+S C
Sbjct: 395 EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLC 454
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTN 446
+ G EA L ++ S+ + P+V ++ ++ + + + +D A VF +++ GL+
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 447 FCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
+ + D +N + +++ M + + + Y+ +I GLC G K+ ELL
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 199/447 (44%), Gaps = 39/447 (8%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+Q L+R G A +V + T P++++ N ++ + + ++A + ++
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM-KRNG 391
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ P+ V+Y +++ +C G+VD A L + ++ P+A T L GRI EA
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL-PNAYTCNILLHSLWKMGRISEA 450
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF--------------------- 249
+LLR+M KG+G D++ N ++ G G LDKA E+
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL 510
Query: 250 --DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL 307
D L E + D + +T + GR EA + + +M + + V N+ +
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570
Query: 308 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMV-NECFNLGKFHEALATFRKAGTKS 366
K GK + A+ + M + + NS + + N+ F + H + ++ G
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI---HGLMDEMKEKGISP 627
Query: 367 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERI 426
N + YN I CE + +A L +E+ K+++P+V + + LI+A+ K+
Sbjct: 628 N-------ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDF 680
Query: 427 DDALKVFHRMVD-AGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEV 485
D A +VF V G + + +F+EL+ +++ +L + +R + Y+
Sbjct: 681 DMAQEVFETAVSICGQK--EGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKD 738
Query: 486 VIRGLCAKGLLDKSLELLYQVMRYGVG 512
++ LC K L+ + +L++++ G G
Sbjct: 739 LVESLCKKDELEVASGILHKMIDRGYG 765
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 192/464 (41%), Gaps = 36/464 (7%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V S R G D + + P + T N+ I+A+ + + +A +F
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283
Query: 151 I---VPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
+ PN ++YN ++ C G ++ A L+ I S +Y +G + G+
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL-ASLQSYNIWLQGLVRHGKF 342
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
+EA +L++M +KG G YN L+ G +LG L A + +K + D V
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPV----TCNVLLEVLLKHGKKTQAWALFDQML 323
+ + + G+ +D+ KSL+ + + TCN+LL L K G+ ++A L +M
Sbjct: 403 LHGYCSVGK----VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM- 457
Query: 324 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR--------KAGTKSNSKAFAM-- 373
N V T NI+V+ G+ +A+ + G NS +
Sbjct: 458 -NEKGYGLDTV---TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 374 ---------DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKME 424
D+ Y+ +++ C+ G +EA+ LF E+ + L PD + I + K
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQG 573
Query: 425 RIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYE 484
+I A +V M G N + L +++ + ++ +M E+ P+ Y
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633
Query: 485 VVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKA 528
I+ LC ++ + LL ++M+ + +++ E F K
Sbjct: 634 TAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV 677
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 189/481 (39%), Gaps = 60/481 (12%)
Query: 63 SPSRDPNAPRLPDS-TSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFT 121
SPS + + L + T A + R +H +Q L +L +SS+ + + SS
Sbjct: 29 SPSEESHGISLDATPTIARILVRAKMHEEIQEL---HNLILSSSIQK-TKLSSLL----- 79
Query: 122 CNAIIAAMYRAKRYNEAIALFHFF---FTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
++++ ++ ++A F F ++ P++ YN ++ + E RV+ LY
Sbjct: 80 --SVVSIFAKSNHIDKAFPQFQLVRSRFPENK--PSVYLYNLLLESCIKERRVEFVSWLY 135
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+ ++ P T+ L + + + A +L EM KG + + L+ G+ +
Sbjct: 136 KDMVLCG-IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCK 194
Query: 239 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 298
G DK EL + ++ ++ + V+ T + F GR+ ++ + + + VT
Sbjct: 195 AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVT 254
Query: 299 CNVLLEVLLKHGKKTQAWALFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
N + L K GK A +F M LD + NS T+N+M
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYL--GLPRPNSITYNLM--------------- 297
Query: 358 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
+ FC+ GLL +A+TLFE + + ++ +
Sbjct: 298 ------------------------LKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWL 333
Query: 418 DAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPK 477
++ + +A V +M D G+ N + D L K + D I+ M
Sbjct: 334 QGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC 393
Query: 478 PDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERL 537
PD Y ++ G C+ G +D + LL ++MR + K GR E E L
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 538 L 538
L
Sbjct: 454 L 454
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%)
Query: 408 PDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHI 467
P V + L+++ +K R++ ++ MV G+ T N + L + V +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 468 LSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKK 527
+M E+ KP+ + +++RG C GL DK LELL + +GV + + F +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 528 AGRGDEIERLLD 539
GR D+ E++++
Sbjct: 230 EGRNDDSEKMVE 241
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 198/447 (44%), Gaps = 60/447 (13%)
Query: 75 DSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKR 134
D+ +AL+G SL+R G ++ A V + + S V+T N ++ A+ + +
Sbjct: 201 DACNALIG----------SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 135 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 194
E + F + + P+IV+YN +I+ + +G ++ A EL + + F P TY
Sbjct: 251 M-EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM-NAMPGKGFSPGVYTY 308
Query: 195 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 254
+ G G+ A ++ EML G DS Y +L+ + G++ + ++F +++
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 255 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 314
R +V D V ++ M F +G +A+ + S+ + V +L++ + G +
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 315 AWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMD 374
A L ++ML + AMD
Sbjct: 429 AMNLRNEML--------------------------------------------QQGCAMD 444
Query: 375 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFH 434
V YN I+ C+ +L EA+ LF E+ ++L PD T LID + K+ + +A+++F
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 435 RMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKG 494
+M + +R+ N + D K + I + M ++ P P Y +++ LC+KG
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 495 LLDKSL----ELLYQVMRYGVGVTNSL 517
L ++ E++ + ++ V + NS+
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSM 591
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 183/420 (43%), Gaps = 11/420 (2%)
Query: 87 LHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
L+ V +L + G ++ + P + T N +I+A EA L +
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM- 296
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 206
P + +YN VIN C G+ + A E++ ++ + P + TYR L G
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG-LSPDSTTYRSLLMEACKKGD 355
Query: 207 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 266
+VE + +M ++ D + +++++S F GNLDKA F+ +KE L+ D V+
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 267 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 326
++ + G AM+ ++ + M VT N +L L K +A LF++M +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 327 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 386
P+ S T I+++ LG A+ F+K K +DV YN ++ F
Sbjct: 476 LFPD-----SYTLTILIDGHCKLGNLQNAMELFQKM----KEKRIRLDVVTYNTLLDGFG 526
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTN 446
+ G + A+ ++ ++ SK + P ++ L++A + +A +V+ M+ ++
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 447 FCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
CN + ++ D L KM PD Y +I G + + K+ L+ ++
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 164/375 (43%), Gaps = 20/375 (5%)
Query: 73 LPDSTSALVGPRLNLHNRVQSLI-RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYR 131
D S V P L + + SL R+G+LD A + P +I R
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 132 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 191
+ A+ L + Q ++V+YN +++ C + A +L+ + A F P +
Sbjct: 423 KGMISVAMNLRNEML-QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF-PDS 480
Query: 192 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 251
T L G G + A++L ++M K D + YN L+ GF ++G++D A E++ +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 252 LKERCLV-----YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 306
+ + ++ Y +VNA + G EA + ++ + K T + CN +++
Sbjct: 541 MVSKEILPTPISYSILVNA-----LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 307 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 366
+ G + + ++M+ P+ + N+ + + E N+ K A +K +
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE--NMSK---AFGLVKK--MEE 648
Query: 367 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERI 426
DV YN+I+ FC + EAE + ++ + ++PD T+ +I+ ++ + +
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 427 DDALKVFHRMVDAGL 441
+A ++ M+ G
Sbjct: 709 TEAFRIHDEMLQRGF 723
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 151/343 (44%), Gaps = 27/343 (7%)
Query: 187 FGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKAN 246
F ++++ + + +GR+ +A L M+ + + + N+L S F G+ D
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS-- 166
Query: 247 ELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 306
V+D ++ TY++ + +EA +++ L + F ++ CN L+ L
Sbjct: 167 -----------VFDLLIR-TYVQ----ARKLREAHEAFTLLRSKGFTVSIDACNALIGSL 210
Query: 307 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 366
++ G AW ++ ++ + +N T NIMVN GK E + TF ++
Sbjct: 211 VRIGWVELAWGVYQEISRSGV-----GINVYTLNIMVNALCKDGKM-EKVGTFL---SQV 261
Query: 367 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERI 426
K D+ YN +IS + GL+ EA L + K SP V T+ T+I+ K +
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 427 DDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVV 486
+ A +VF M+ +GL + + E K V++ + S M RD PD C+ +
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 487 IRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAG 529
+ G LDK+L V G+ N + + + + + G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
+ G+L A + + R V T N ++ + + A ++ ++ I+P
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE-ILPTP 550
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
+SY+ ++N C +G + A ++ +I+ P+ + + KG+ +G + L
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER--CLVYDGVVNATYMEWFFN 273
+M+++G D + YN LI GF+ N+ KA L +++E LV D + + F
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 274 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ KEA + +++R T ++ + T+A+ + D+ML P+
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 158/332 (47%), Gaps = 11/332 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ SL + +D A ++ RP VFT +++I+ + R+++A L +
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML-ERK 305
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN+V++N++I+ EG++ A +L+ +I + P+ VTY L GF R+ EA
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS-IDPNIVTYNSLINGFCMHDRLDEA 364
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ M++K D + YN LI+GF + + ELF ++ R LV + V T +
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
FF A +K ++ +T N LL+ L K+GK +A +F+ + + P+
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
T+NIM GK + F + K DV YN +IS FC+ GL
Sbjct: 485 IY-----TYNIMSEGMCKAGKVEDGWDLF----CSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMK 422
EA TLF ++ PD T+ TLI A+++
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 182/422 (43%), Gaps = 13/422 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L R L A ++ P++ T N+++ R +EA+AL +
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM-VEMG 165
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
P+ V++ +++ + A+ L ++ P VTY + G G A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVINGLCKRGEPDLA 224
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L+LL +M AD ++Y+ +I + ++D A LF E+ + + D ++ +
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
N GR +A +++R+ VT N L++ K GK +A LFD+M+ PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 331 FQAVNSDTFNIMVNE-CFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
T+N ++N C H+ L ++ T SK DV YN +I+ FC+
Sbjct: 345 IV-----TYNSLINGFCM-----HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCN 449
+ + LF ++ + L + T+ TLI + + D+A VF +MV G+ N
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 450 RVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRY 509
+ D L KN K+ + + + +PD Y ++ G+C G ++ +L +
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 510 GV 511
GV
Sbjct: 515 GV 516
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 169/395 (42%), Gaps = 11/395 (2%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P T ++ +++ + +EA+AL + P++V+Y VIN C G D+AL
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
L + V Y + + +AL+L EM NKG D Y++LIS
Sbjct: 226 NLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G A+ L ++ ER + + V + ++ F G+ EA + ++ R
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
VT N L+ H + +A +F M+ P+ T+N ++N K +
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV-----TYNTLINGFCKAKKVVDG 399
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+ FR + + + Y +I F + A+ +F+++ S + P++ T+ T
Sbjct: 400 MELFRDM----SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
L+D K +++ A+ VF + + + N + + + K KV D + + +
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
KPD Y +I G C KGL +++ L ++ G
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 181/415 (43%), Gaps = 52/415 (12%)
Query: 100 LDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYN 159
LD A + S P++ + +++A+ + K+++ I+ F + N+ +YN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTYN 104
Query: 160 NVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 219
+IN C ++ AL + ++ +GPS VT L GF RI EA+ L+ +M+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLG-YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
G+ D++ + L+ G F + + E
Sbjct: 164 MGYQPDTVTFTTLVHGL-----------------------------------FQHNKASE 188
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
A+ + ++ + + VT ++ L K G+ A L ++M + +
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV-----IY 243
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
+ +++ +AL F T+ ++K DV Y+++IS C G S+A L
Sbjct: 244 STVIDSLCKYRHVDDALNLF----TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDELIK 457
++ + ++P+V T +LIDA+ K ++ +A K+F M+ + +VT N + +
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY--NSLINGFCM 357
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLC-AKGLLDKSLELLYQVMRYGV 511
+D++ + I + M +D PD Y +I G C AK ++D +EL + R G+
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD-GMELFRDMSRRGL 411
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 2/178 (1%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LVG + + +A D D A V + P + T N ++ + + +
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
+A+ +F + +S + P+I +YN + C G+V+ +L+ ++ P + Y
Sbjct: 467 EKAMVVFE-YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS-LSLKGVKPDVIAYN 524
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
+ GF G EA L +M G DS YN LI L G+ + EL E++
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 103/254 (40%), Gaps = 9/254 (3%)
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
T N+++ L + + + A A+ +M+ P+ +NS ++N + + EA+A
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNS-----LLNGFCHGNRISEAVA 156
Query: 358 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
+ + D + ++ ++ SEA L E + K PD+ T+ +I
Sbjct: 157 LVDQM----VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 418 DAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPK 477
+ K D AL + ++M + + V D L K V D ++ ++M + +
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 478 PDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERL 537
PD Y +I LC G + LL ++ + + + F K G+ E E+L
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 538 LDFNTPRYRPPQLT 551
D R P +
Sbjct: 333 FDEMIQRSIDPNIV 346
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 191/440 (43%), Gaps = 29/440 (6%)
Query: 81 VGPRLNLHNR-VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAI 139
V P L +N +Q L + G+LD A + +P V T N +I + + ++ EA
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA- 305
Query: 140 ALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG---PSAVTYRH 196
++ + P+ +YN +I +C G V +A I+ A F P TYR
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA----ERIVGDAVFNGFVPDQFTYRS 361
Query: 197 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 256
L G G AL L E L KG + ++YN LI G G + +A +L +E+ E+
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 257 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ-- 314
L+ + + G +A K ++ + + T N+L+ HG TQ
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI-----HGYSTQLK 476
Query: 315 ---AWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 371
A + D MLDN P+ T+N ++N KF + + T++ K
Sbjct: 477 MENALEILDVMLDNGVDPDVY-----TYNSLLNGLCKTSKFEDVMETYKTM----VEKGC 527
Query: 372 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALK 431
A ++ +N ++ C L EA L EE+ +KS++PD T TLID + K +D A
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 432 VFHRMVDA-GLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
+F +M +A + T N + + V + +M +R PD Y +++ G
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 491 CAKGLLDKSLELLYQVMRYG 510
C G ++ + L ++M G
Sbjct: 648 CKTGNVNLGYKFLLEMMENG 667
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 174/386 (45%), Gaps = 10/386 (2%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
+ G + A + + F+ P FT ++I + N A+ALF+ + I PN+
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG-IKPNV 391
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
+ YN +I ++G + A +L + + P T+ L G G + +A L++
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEM-SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
M++KG+ D +N LI G+ ++ A E+ D + + + D + +
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 276 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 335
+ ++ M++YK+++++ T N+LLE L ++ K +A L ++M + P +
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP-----D 565
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
+ TF +++ G A FRK + + YN II F E ++ AE
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKM---EEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDEL 455
LF+E+ + L PD T+R ++D + K ++ K M++ G RV + L
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Query: 456 IKNDKVIDCAHILSKMGERDPKPDPT 481
D+V + A I+ +M ++ P+
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 157/356 (44%), Gaps = 45/356 (12%)
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
+ ++PN+ +YN I C G +D A+ + +I P P +TY +L G +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP-KPDVITYNNLIYGLCKNSKF 302
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
EA L +M+N+G DS YN LI+G+ + G + +L ER +V D V N
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV--------QLAER-IVGDAVFNGFV 353
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
+ F +Y+SL+D L G+ +A ALF++ L
Sbjct: 354 PDQF-----------TYRSLIDG---------------LCHEGETNRALALFNEALGKGI 387
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
PN +N ++ N G EA + + + K +V +N +++ C+
Sbjct: 388 KPNVI-----LYNTLIKGLSNQGMILEA----AQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNF 447
G +S+A+ L + + SK PD+ T LI Y ++++AL++ M+D G+
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 448 CNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
N + + L K K D M E+ P+ + +++ LC LD++L LL
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 134/335 (40%), Gaps = 32/335 (9%)
Query: 174 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML-NKGHGADSLVYNNL 232
ALE++ + F + TYR + + G+ ++L +M N G+ VY
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 233 ISGFLELGNLDKANELFDELKERCLVYDG-----VVNATYMEWFFNNGRDKEAMDSYKSL 287
+ + G + +A +F ER YD NA M ++G +A Y +
Sbjct: 83 MKNYGRKGKVQEAVNVF----ERMDFYDCEPTVFSYNAI-MSVLVDSGYFDQAHKVYMRM 137
Query: 288 MDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECF 347
DR + + ++ K + A L + M N +V C
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMN-----------VVAYCT 186
Query: 348 NLGKFHEALATFRKAGTKSNSKAFAMDVA----GYNNIISRFCENGLLSEAETLFEELCS 403
+G F+E F+ G + K A V+ +N ++ C+ G + E E L +++
Sbjct: 187 VVGGFYEE--NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 404 KSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--VVTNFCNRVFDELIKNDKV 461
+ + P++ T+ I + +D A+++ +++ G + V+T N + L KN K
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY--NNLIYGLCKNSKF 302
Query: 462 IDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLL 496
+ L KM +PD Y +I G C G++
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 308 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 367
+ GK +A +F++M P + N+ +++V+ G F +A K +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNA-IMSVLVDS----GYFDQA----HKVYMRMR 138
Query: 368 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERID 427
+ DV + + FC+ A L + S+ +V + T++ + +
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 428 DALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVI 487
+ ++F +M+ +G+ + + N++ L K V +C +L K+ +R P+ Y + I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 488 RGLCAKGLLDKSLELLYQVMRYG 510
+GLC +G LD ++ ++ ++ G
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQG 281
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 157/363 (43%), Gaps = 38/363 (10%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V L + GD+D A S+ + P V N II A+ K N+A+ LF
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM-DNKG 286
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN+V+YN++I C+ GR A L +I P+ VT+ L F+ G++VEA
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEA 345
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L EM+ + D Y++LI+GF LD+A +F+ + + + V T ++
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F R E M+ ++ + R VT L+ + + A +F QM+ + P+
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFR----------------------KAGTKSNS 368
T++I+++ N GK AL F KAG +
Sbjct: 466 IM-----TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 369 ---------KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDA 419
K +V Y ++S FC GL EA+ LF E+ + PD T+ TLI A
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 420 YMK 422
+++
Sbjct: 581 HLR 583
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 182/413 (44%), Gaps = 18/413 (4%)
Query: 101 DAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNN 160
DA S V + +P FT N +I ++R R +EA+AL + P++V+Y
Sbjct: 169 DAVSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGI 226
Query: 161 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 220
V+N C G +D+AL L + + P V Y + + + +AL+L EM NK
Sbjct: 227 VVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 221 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 280
G + + YN+LI G A+ L ++ ER + + V + ++ F G+ EA
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 281 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 340
Y ++ R T + L+ H + +A +F+ M+ PN T+N
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV-----TYN 400
Query: 341 IMVNECFNLGKFHEALATFRKA---GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
++ + E + FR+ G N+ + + G+ +R C+N A+ +
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ--ARECDN-----AQIV 453
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
F+++ S + PD+ T+ L+D +++ AL VF + + + N + + + K
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
KV D + + + KP+ Y ++ G C KGL +++ L ++ G
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 168/356 (47%), Gaps = 10/356 (2%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+IV+ N+++N C R+ A+ L ++ + P + T+ L G R EA+
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L+ M+ KG D + Y +++G + G++D A L ++++ + V+ T ++
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
N +A++ + + ++ + VT N L+ L +G+ + A L M++ PN
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
TF+ +++ GK EA K + ++ D+ Y+++I+ FC + L
Sbjct: 328 -----TFSALIDAFVKEGKLVEA----EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
EA+ +FE + SK P+V T+ TLI + K +R+D+ +++F M GL T +
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
+ + + + +M PD Y +++ GLC G ++ +L + + R
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 14/344 (4%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
Y + ++ ++D A+ L+ ++ + PF PS V + L + + L +M
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQM 107
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
N G + Y+ LI+ F L A + ++ + D V + + F + R
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
+A+ +++ ++ T N L+ L +H + ++A AL D+M+ P+
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV----- 222
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
T+ I+VN G AL+ +K V YN II C +++A L
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKM----EQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDEL 455
F E+ +K + P+V T+ +LI R DA ++ M++ + VVT + + D
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT--FSALIDAF 336
Query: 456 IKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKS 499
+K K+++ + +M +R PD Y +I G C LD++
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 68/129 (52%)
Query: 378 YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMV 437
Y+ +I+ FC LS A + ++ PD+ T +L++ + RI DA+ + +MV
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 438 DAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLD 497
+ G + + N + L ++++ + ++ +M + +PD Y +V+ GLC +G +D
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 498 KSLELLYQV 506
+L LL ++
Sbjct: 239 LALSLLKKM 247
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/357 (18%), Positives = 141/357 (39%), Gaps = 44/357 (12%)
Query: 194 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
YR ++ ++ ++ +A++L +M+ + ++ L+S ++ D L ++++
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 254 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 313
+ ++ + + F + A+ +M ++ VT N LL + +
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 314 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 373
A +L QM++ P+ S TFN +++ F + EA+A + K
Sbjct: 169 DAVSLVGQMVEMGYQPD-----SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP---- 219
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
D+ Y +++ C+ G + A +L +++ + P V + T+IDA + ++DAL +F
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 434 HRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAK 493
++M + +P+ Y +IR LC
Sbjct: 280 -----------------------------------TEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 494 GLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPPQL 550
G + LL ++ + + + F K G+ E E+L D R P +
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 186/396 (46%), Gaps = 25/396 (6%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
V+ N ++ + R +A++L +++++P++ SYN VI C+ ++ ALEL
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREM-RRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+ + S VT+ L F AG++ EA+ L+EM G AD +VY +LI GF +
Sbjct: 201 NEMKGSGC-SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 239 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 298
G LD+ LFDE+ ER + T + F G+ KEA + ++ +++R + T
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 299 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 358
L++ L GK +A L + M++ PN AV T+NI++N+ G +A+
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN--AV---TYNIIINKLCKDGLVADAVEI 374
Query: 359 ---FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS--LSPDVPTH 413
+K T+ D YN ++ C G L EA L + S PDV ++
Sbjct: 375 VELMKKRRTRP-------DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 414 RTLIDAYMKMERIDDALKVFHRMVD---AGLRVVTNFCNRVFDELIKNDKVIDCAHILSK 470
LI K R+ AL ++ +V+ AG RV TN + + +K V + +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI---LLNSTLKAGDVNKAMELWKQ 484
Query: 471 MGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
+ + + Y +I G C G+L+ + LL ++
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 186/445 (41%), Gaps = 62/445 (13%)
Query: 93 SLIR----AGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQ 148
SLIR G+LD ++ P T N +I + + EA +F F +
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI-E 310
Query: 149 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 208
+ PN+ +Y +I+ C G+ AL+L +I P+AVTY + G +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE-EPNAVTYNIIINKLCKDGLVA 369
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL-FDELKER------CLVYDG 261
+A++++ M + D++ YN L+ G G+LD+A++L + LK+ + Y+
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
+++ E R +A+D Y L+++ VT N+LL LK G +A L+ Q
Sbjct: 430 LIHGLCKE-----NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
+ D+ N SDT+ M++ G + A K V YN +
Sbjct: 485 ISDSKIVRN-----SDTYTAMIDGFCKTGMLNVAKGLL----CKMRVSELQPSVFDYNCL 535
Query: 382 ISRFCENGLLSEAETLFEE-----------------------------------LCSKSL 406
+S C+ G L +A LFEE + L
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 407 SPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAH 466
SPD+ T+ LI+ ++K+ +D+A+ F +MVD+G + C+ V I +
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655
Query: 467 ILSKMGERDPKPDPTCYEVVIRGLC 491
++ K+ ++D D V+ +C
Sbjct: 656 LVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 169/430 (39%), Gaps = 54/430 (12%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
++ + G L AS + RP V+T +I + + EA+ L + +
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
PN V+YN +IN C +G V A+E+ ++ P +TY L G + G + EA
Sbjct: 349 -EPNAVTYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 211 LDLLREMLNKGHGAD--SLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 268
LL ML D + YN LI G + L +A +++D L E+ D V +
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQF--------KMTPVTC--------------------- 299
G +AM+ +K + D + M C
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 300 ------NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 353
N LL L K G QAW LF++M ++ P+ +FNIM++ G
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV-----SFNIMIDGSLKAGDIK 581
Query: 354 EA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 410
A L +AG + D+ Y+ +I+RF + G L EA + F+++ PD
Sbjct: 582 SAESLLVGMSRAG-------LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Query: 411 PTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSK 470
+++ + D ++ ++VD + + V D + + +D A L +
Sbjct: 635 HICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLR 694
Query: 471 MGERDPKPDP 480
+ + + D
Sbjct: 695 VTDDKEERDK 704
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 186/448 (41%), Gaps = 52/448 (11%)
Query: 66 RDPNAPRL---PDSTSALVGPRLNLHNRVQSLIRAGD--LDAASSVARHSTFSSTRPTVF 120
RD + R P S LV +++SL + L A SV + + S + F
Sbjct: 15 RDEHVVRKLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGS-SLAF 73
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
N ++A + R++ + A + F+ +++ N VS + ++ + + A +
Sbjct: 74 AGNNLMAKLVRSRNHELAFS-FYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVL-A 131
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
++ F + + L KG +A+ LLREM D YN +I GF E
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 241 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 300
L+KA EL +E+K + V ++ F G+ EAM K + + V
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 360
L+ G+ + ALFD++L+ P + T+N ++ LG+
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSP-----CAITYNTLIRGFCKLGQ--------- 297
Query: 361 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY 420
L EA +FE + + + P+V T+ LID
Sbjct: 298 ------------------------------LKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 421 MKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDP 480
+ + +AL++ + M++ N + ++L K+ V D I+ M +R +PD
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 481 TCYEVVIRGLCAKGLLDKSLELLYQVMR 508
Y +++ GLCAKG LD++ +LLY +++
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLK 415
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 180/408 (44%), Gaps = 19/408 (4%)
Query: 102 AASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNV 161
A S R F RP VFT N I+ M R + + + + N PN+ ++ +
Sbjct: 146 AVESFGRMKEFD-CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGIL 204
Query: 162 INTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG 221
++ +GR A +++ + P+ VTY L G G +A L EM G
Sbjct: 205 MDGLYKKGRTSDAQKMFDDMTGRG-ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSG 263
Query: 222 HGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAM 281
+ DS+ +N L+ GF +LG + +A EL ++ V ++ ++ F R +A
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAF 323
Query: 282 DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNI 341
+ Y +++ + K + +L++ L K GK A L M P+ + +N
Sbjct: 324 ELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD-----TYCYNA 378
Query: 342 MVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 401
++ G E + + S +++F D + +I C NGL+ EAE +F E+
Sbjct: 379 VIKALCGRGLLEEGRSLQLEM---SETESFP-DACTHTILICSMCRNGLVREAEEIFTEI 434
Query: 402 CSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG------LRVVTNFCNRVFDEL 455
SP V T LID K + +A + H+M + G LR+ ++ NR FD +
Sbjct: 435 EKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVGRPASLFLRL-SHSGNRSFDTM 492
Query: 456 IKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
+++ ++ L+ + PD Y V+I G C G +D +L+LL
Sbjct: 493 VESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 197/484 (40%), Gaps = 48/484 (9%)
Query: 62 HSPSRDPNAPRL-PDSTSALVGP-RLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTV 119
+ R +A ++ D T + P R+ + L + G D A + S P
Sbjct: 209 YKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDS 268
Query: 120 FTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYR 179
NA++ + R EA L F + V + Y+++I+ R A ELY
Sbjct: 269 VAHNALLDGFCKLGRMVEAFELLRLF-EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 180 HIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLEL 239
+++ P + Y L +G AG+I +AL LL M +KG D+ YN +I
Sbjct: 328 NMLKK-NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR 386
Query: 240 GNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTC 299
G L++ L E+ E D + + NG +EA + + + + T
Sbjct: 387 GLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATF 446
Query: 300 NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN---SDTFNIMVNECFNLGKFHEAL 356
N L++ L K G+ +A L +M F ++ + +F+ MV E ++ K + L
Sbjct: 447 NALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV-ESGSILKAYRDL 505
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
A F G+ D+ YN +I+ FC G + A L L K LSPD T+ TL
Sbjct: 506 AHFADTGSSP-------DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
Query: 417 IDAYMKMERIDDALKVFHRMVD-----AGLRVVTNFCNR------VFDELIKNDKVIDC- 464
I+ ++ R ++A K+F+ D A R + + R F+ +K K I C
Sbjct: 559 INGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCL 618
Query: 465 -----------------AHILSKMGERDPKPDPTC---YEVVIRGLCAKGLLDKSLELLY 504
L ++ E D + D Y + + GLC G ++L +++
Sbjct: 619 DDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEAL-MVF 677
Query: 505 QVMR 508
V+R
Sbjct: 678 SVLR 681
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 168/391 (42%), Gaps = 24/391 (6%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+++L G L+ S+ + + + P T +I +M R EA +F +S
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEI-EKSG 438
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKG-------FIS 203
P++ ++N +I+ C G + A R ++ G A + L+ +
Sbjct: 439 CSPSVATFNALIDGLCKSGELKEA----RLLLHKMEVGRPASLFLRLSHSGNRSFDTMVE 494
Query: 204 AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 263
+G I++A L + G D + YN LI+GF G++D A +L + L+ + L D V
Sbjct: 495 SGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVT 554
Query: 264 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 323
T + GR++EA + + D F+ +P L+ + K A+ L+ + L
Sbjct: 555 YNTLINGLHRVGREEEAFKLFYAKDD--FRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYL 612
Query: 324 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 383
+ + + N + +CF G+ AL + T+ + + + Y +
Sbjct: 613 KKISCLDDETANE------IEQCFKEGETERALRRLIELDTRKDE----LTLGPYTIWLI 662
Query: 384 RFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRV 443
C++G EA +F L K + P+ LI K E++D A++VF +D ++
Sbjct: 663 GLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKL 722
Query: 444 VTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
+ CN + L+++ + ++ L+ ER
Sbjct: 723 MPRVCNYLLSSLLESTEKMEIVSQLTNRMER 753
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 122/296 (41%), Gaps = 20/296 (6%)
Query: 214 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE-----RCLVYDGVVNATYM 268
L E+ + G DS + LIS + ++G +KA E F +KE Y+ ++
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 328
E F A Y ++ T +L++ L K G+ + A +FD M
Sbjct: 175 EEVFF----MLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS 230
Query: 329 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 388
P N T+ I+++ G +A F + T N D +N ++ FC+
Sbjct: 231 P-----NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYP----DSVAHNALLDGFCKL 281
Query: 389 GLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFC 448
G + EA L + + +LID + R A +++ M+ ++
Sbjct: 282 GRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILY 341
Query: 449 NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLD--KSLEL 502
+ L K K+ D +LS M + PD CY VI+ LC +GLL+ +SL+L
Sbjct: 342 TILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL 397
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 190/448 (42%), Gaps = 11/448 (2%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ R L A +V P + T ++++ +KR ++A+AL +
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM-VEMG 183
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
P+ ++ +I+ + A+ L ++ P VTY + G G I A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC-QPDLVTYGTVVNGLCKRGDIDLA 242
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L LL++M AD ++YN +I G + ++D A LF E+ + + D ++ +
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
N GR +A +++R+ VT + L++ +K GK +A L+D+M+ P+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
T++ ++N + EA F +K F +V Y+ +I FC+
Sbjct: 363 IF-----TYSSLINGFCMHDRLDEAKHMFELMISKD---CFP-NVVTYSTLIKGFCKAKR 413
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
+ E LF E+ + L + T+ TLI + + D+A VF +MV G+ N
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 451 VFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
+ D L KN K+ + + +PD Y ++I G+C G ++ EL + G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 511 VGVTNSLREFVTEVFKKAGRGDEIERLL 538
V + F + G +E + LL
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLL 561
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 184/451 (40%), Gaps = 63/451 (13%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V L + GD+D A S+ + V N II + + K ++A+ LF
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM-DNKG 288
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P++ +Y+++I+ C+ GR A L +I P+ VT+ L F+ G++VEA
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEA 347
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L EM+ + D Y++LI+GF LD+A +F+ + + + V +T ++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F R +E M+ ++ + R VT L+ + A +F QM+ PN
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
+ YN ++ C+NG
Sbjct: 468 --------------------------------------------ILTYNILLDGLCKNGK 483
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-------- 442
L++A +FE L ++ PD+ T+ +I+ K +++D ++F + G+
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 443 VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
+++ FC + E + +L KM E P P+ Y +IR G + S EL
Sbjct: 544 MISGFCRKGSKE--------EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 503 LYQVMRYGVGVTNSLREFVTEVFKKAGRGDE 533
+ ++ G S VT + GR D+
Sbjct: 596 IKEMRSCGFAGDASTIGLVTNMLHD-GRLDK 625
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 149/339 (43%), Gaps = 14/339 (4%)
Query: 163 NTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGH 222
N D +VD A++L+ ++ + PF PS V + L + + L +M G
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 223 GADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMD 282
D Y+ I+ F L A + ++ + D V ++ + + ++ R +A+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 283 SYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIM 342
+++ +K T L+ L H K ++A AL DQM+ P+ T+ +
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV-----TYGTV 229
Query: 343 VNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELC 402
VN G AL+ +K K +A DV YN II C+ + +A LF E+
Sbjct: 230 VNGLCKRGDIDLALSLLKKM-EKGKIEA---DVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 403 SKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDELIKNDK 460
+K + PDV T+ +LI R DA ++ M++ + VVT + + D +K K
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF--SALIDAFVKEGK 343
Query: 461 VIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKS 499
+++ + +M +R PD Y +I G C LD++
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LVG + + +A D D A V + P + T N ++ + + +
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
+A+ +F + +S + P+I +YN +I C G+V+ EL+ ++ + P+ + Y
Sbjct: 485 AKAMVVFEYL-QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYN 542
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
+ GF G EA LL++M G +S YN LI L G+ + + EL E++
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 4/168 (2%)
Query: 339 FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 398
FN +++ + KF ++ G + + + D+ Y+ I+ FC LS A +
Sbjct: 86 FNKLLSAVAKMNKFELVISL----GEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 399 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKN 458
++ PD+ T +L++ Y +RI DA+ + +MV+ G + T + L +
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 459 DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
+K + ++ +M +R +PD Y V+ GLC +G +D +L LL ++
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/366 (19%), Positives = 141/366 (38%), Gaps = 47/366 (12%)
Query: 187 FGPSAVTYRHLTKGFIS-AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 245
F ++ YR + + +S ++ +A+DL +M+ + +N L+S ++ +
Sbjct: 43 FASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELV 102
Query: 246 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 305
L ++++ + +D + ++ F + A+ +M ++ VT + LL
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG 162
Query: 306 LLKHGKKTQAWALFDQMLD-NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGT 364
+ + A AL DQM++ + P F TF +++ F K EA+A
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTF------TFTTLIHGLFLHNKASEAVA------- 209
Query: 365 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKME 424
L +++ + PD+ T+ T+++ K
Sbjct: 210 --------------------------------LVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 425 RIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYE 484
ID AL + +M + N + D L K + D ++ ++M + +PD Y
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 485 VVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPR 544
+I LC G + LL ++ + + + F K G+ E E+L D R
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 545 YRPPQL 550
P +
Sbjct: 358 SIDPDI 363
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 192/416 (46%), Gaps = 19/416 (4%)
Query: 100 LDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYN 159
LD T S P V T +A++ + + + + A+ LF+ + I P++ Y
Sbjct: 173 LDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVS-VGIRPDVYIYT 231
Query: 160 NVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 219
VI + C+ + A E+ H+ AT + V Y L G ++ EA+ + +++
Sbjct: 232 GVIRSLCELKDLSRAKEMIAHMEATGC-DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAG 290
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD--GVVNATYMEWFFNNGRD 277
K D + Y L+ G ++ + E+ DE+ CL + ++ +E G+
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM--LCLRFSPSEAAVSSLVEGLRKRGKI 348
Query: 278 KEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 335
+EA++ K ++D F ++P N L++ L K K +A LFD+M PN
Sbjct: 349 EEALNLVKRVVD--FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN----- 401
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
T++I+++ GK AL+ G ++ + V YN++I+ C+ G +S AE
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFL---GEMVDT-GLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDEL 455
E+ +K L P V T+ +L+ Y +I+ AL+++H M G+ + L
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 456 IKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+ + D + ++M E + KP+ Y V+I G C +G + K+ E L ++ G+
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 187/458 (40%), Gaps = 60/458 (13%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
+ GD+ AA PTV T +++ + N+A+ L+H T I P+I
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM-TGKGIAPSI 507
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
++ +++ G + A++L+ + A P+ VTY + +G+ G + +A + L+
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFD-------ELKERCLVYDGVVNATYM 268
EM KG D+ Y LI G G +A D EL E C Y G+++
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC--YTGLLHG--- 621
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 328
F G+ +EA+ + ++ R + V VL++ LKH + + L +M D
Sbjct: 622 --FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK 679
Query: 329 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 388
P+ + M++ G F EA + N +V Y +I+ C+
Sbjct: 680 PD-----DVIYTSMIDAKSKTGDFKEAFGIW---DLMINEGCVPNEVT-YTAVINGLCKA 730
Query: 389 GLLSEAETLFEEL-----------------------------------CSKSLSPDVPTH 413
G ++EAE L ++ K L + T+
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGE 473
LI + + RI++A ++ RM+ G+ + +EL + + V + + M E
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 474 RDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+ +PD Y +I G C G + K+ EL +++R G+
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 20/226 (8%)
Query: 124 AIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIA 183
++I A + + EA ++ + VPN V+Y VIN C G V+ A L +
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEG-CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 184 TAPFGPSAVTY----RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLEL 239
+ P+ VTY LTKG + + VE L + KG A++ YN LI GF
Sbjct: 746 VSSV-PNQVTYGCFLDILTKGEVDMQKAVE----LHNAILKGLLANTATYNMLIRGFCRQ 800
Query: 240 GNLDKANELF-----DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 294
G +++A+EL D + C+ Y ++N K+A++ + S+ ++ +
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINE-----LCRRNDVKKAIELWNSMTEKGIRP 855
Query: 295 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 340
V N L+ G+ +A L ++ML PN + + T N
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSN 901
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 182/425 (42%), Gaps = 27/425 (6%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ +++GDL AS V + P V T +I + + R EA ++ +
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL-KRG 421
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ P+IV+Y+++I+ C G + LY +I + P V Y L G G ++ A
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG-YPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ +ML + + +V+N+LI G+ L D+A ++F + + D T M
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKM----TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 326
GR +EA+ L R FKM + L++ KH K T LFD M N
Sbjct: 541 SIMEGRLEEAL----FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596
Query: 327 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM--DVAGYNNIISR 384
+ N++++ F + +A F +N M D+ YN +I
Sbjct: 597 ISADIAVC-----NVVIHLLFKCHRIEDASKFF------NNLIEGKMEPDIVTYNTMICG 645
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-- 442
+C L EAE +FE L P+ T LI K +D A+++F M + G +
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 705
Query: 443 VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
VT C + D K+ + + +M E+ P Y ++I GLC +G +D++ +
Sbjct: 706 AVTYGC--LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 503 LYQVM 507
+Q +
Sbjct: 764 FHQAI 768
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 152/350 (43%), Gaps = 11/350 (3%)
Query: 142 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 201
FH + IVS N V+ + +++VA L ++ P P+ VT+ L GF
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGP-APNVVTFCTLINGF 296
Query: 202 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
G + A DL + M +G D + Y+ LI G+ + G L ++LF + + + D
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
VV ++ ++ + +G A YK ++ + VT +L++ L + G+ +A+ ++ Q
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
+L P+ T++ +++ G A + + DV Y +
Sbjct: 417 ILKRGMEPSIV-----TYSSLIDGFCKCGNLRSGFALYEDM----IKMGYPPDVVIYGVL 467
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+ + GL+ A ++ +S+ +V +LID + ++ R D+ALKVF M G+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 442 RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLC 491
+ V I ++ + + +M + +PD Y +I C
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 136/348 (39%), Gaps = 51/348 (14%)
Query: 166 CDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGAD 225
C G VD ALE++ + P YR MLN G+D
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYR---------------------MLNSLIGSD 195
Query: 226 SLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV-VNATYMEWFFNNGRDKEAMDSY 284
+D + FD+L + GV + ++ F G +A+D +
Sbjct: 196 ---------------RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFH 240
Query: 285 KSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN 344
+ +M+R F++ V+CN +L+ L + A L +LD PN TF ++N
Sbjct: 241 RLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVV-----TFCTLIN 294
Query: 345 ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSK 404
G+ A F+ + D+ Y+ +I + + G+L LF + K
Sbjct: 295 GFCKRGEMDRAFDLFKVM----EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 405 SLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDELIKNDKVI 462
+ DV + ID Y+K + A V+ RM+ G+ VVT + L ++ ++
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY--TILIKGLCQDGRIY 408
Query: 463 DCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
+ + ++ +R +P Y +I G C G L L +++ G
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 178/414 (42%), Gaps = 48/414 (11%)
Query: 134 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI------------ 181
++++A +LF QS +P+IV + V+ + D+ + LY +
Sbjct: 59 KFDDAFSLFCEML-QSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 117
Query: 182 ----------------------IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 219
+ F PS VT L GF R EA+ L+ M
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
G + ++YN +I+G + +L+ A E+F ++++ + D V T + N+GR +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
A + ++ R+ + L++ +K G +A L+ +M+ PN NS
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
++ C K+ L SK DV YN +I+ FC++ + + LF
Sbjct: 298 GFCIHGCLGDAKYMFDLMV---------SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--VVTNFCNRVFDELIK 457
E+ + L D T+ TLI Y + +++ A KVF+RMVD G+ +VT N + D L
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY--NILLDCLCN 406
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
N K+ ++ + + + D Y ++I+GLC L ++ L + R GV
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 160/378 (42%), Gaps = 50/378 (13%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
RP++ T +++ + R+ EA++L VPN+V YN VIN C ++ AL
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSM-DGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
E++ + + AVTY L G ++GR +A LLR+M+ + + + + LI
Sbjct: 205 EVF-YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 236 FLELGNLDKANELFDELKERCLV-----YDGVVNA------------------------- 265
F++ GNL +A L+ E+ R +V Y+ ++N
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 266 -----TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD 320
T + F + R ++ M + + + T N L+ + GK A +F+
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 321 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN 380
+M+D P+ T+NI+++ N GK +AL +D+ YN
Sbjct: 384 RMVDCGVSPDIV-----TYNILLDCLCNNGKIEKALVMVEDL----QKSEMDVDIITYNI 434
Query: 381 IISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
II C L EA LF L K + PD + T+I + +A K+ RM + G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 441 LRVVTNFCNRVFDELIKN 458
R++DE +++
Sbjct: 495 FMPS----ERIYDETLRD 508
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 2/240 (0%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L +G A+ + R P V A+I + EA L+ +S
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS- 284
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+VPN+ +YN++IN C G + A ++ +++ F P VTY L GF + R+ +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF-PDVVTYNTLITGFCKSKRVEDG 343
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ L EM +G D+ YN LI G+ + G L+ A ++F+ + + + D V ++
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
NNG+ ++A+ + L + + +T N++++ L + K +AW LF + P+
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 120/278 (43%), Gaps = 3/278 (1%)
Query: 54 NAIRPPLQHSPSRDPNAPRLPDSTSALVGPRLNLHNR-VQSLIRAGDLDAASSVARHSTF 112
N + L +S A L D + P + + + ++ G+L A ++ +
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 282
Query: 113 SSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD 172
S P VFT N++I +A +F ++ P++V+YN +I C RV+
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG-CFPDVVTYNTLITGFCKSKRVE 341
Query: 173 VALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNL 232
++L+ + G A TY L G+ AG++ A + M++ G D + YN L
Sbjct: 342 DGMKLFCEMTYQGLVG-DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 233 ISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 292
+ G ++KA + ++L++ + D + ++ + KEA ++SL +
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 293 KMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
K + ++ L + G + +A L +M ++ P+
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 154/401 (38%), Gaps = 75/401 (18%)
Query: 194 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
YR + + + +A L EML + + +++ ++ D L+ +++
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 254 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 313
+ +D + F R A+ +M F+ + VT LL + +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 314 QAWALFDQMLDNHTPPNF----------------------------QAVNSD--TFNIMV 343
+A +L D M PN + + +D T+N ++
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 344 NECFNLGKFHEA----------------------LATFRKAGTKSNSKAFAMD------- 374
+ N G++ +A + TF K G ++ +
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 375 --VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKV 432
V YN++I+ FC +G L +A+ +F+ + SK PDV T+ TLI + K +R++D +K+
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 433 FHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCA 492
F M GL N + + K+ + ++M + PD Y +++ LC
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 493 KGLLDKSLELL--------------YQVMRYGVGVTNSLRE 519
G ++K+L ++ Y ++ G+ T+ L+E
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 198/488 (40%), Gaps = 82/488 (16%)
Query: 56 IRPPLQHSPSRDPNAPR-LPDSTSALVGPRLNLHNR-VQSLIRAGDLDAASSVARHSTFS 113
I+ LQ+S R +A R L + + P + +N + L +A +D A S +
Sbjct: 459 IKTFLQNS--RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 114 STRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDV 173
+P FT A I+ A + A + ++PN V +IN +C +G+V
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEM-RECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 174 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI 233
A YR ++ G A TY L G ++ +A ++ REM KG D Y LI
Sbjct: 576 ACSAYRSMVDQGILG-DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 234 SGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK 293
+GF +LGN+ KA+ +FDE+ E L + ++ + F +G ++A + + +
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLGKF 352
VT +++ K G +A+ LFD+M L P +F + +V+ C L
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF------VYTTLVDGCCRLNDV 748
Query: 353 HEALATF--RKAGTKSNSKAF--------------------------AMDVAG------Y 378
A+ F K G S++ F + D G Y
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 379 NNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD 438
N +I C+ G L A+ LF ++ + +L P V T+ +L++ Y KM R + VF +
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 439 AGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDK 498
AG+ +PD Y V+I +G+ K
Sbjct: 869 AGI-----------------------------------EPDHIMYSVIINAFLKEGMTTK 893
Query: 499 SLELLYQV 506
+L L+ Q+
Sbjct: 894 ALVLVDQM 901
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 187/420 (44%), Gaps = 16/420 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V+ + +GDLD A ++ + S RP V +I + R+ +A+ + Q
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG- 482
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P+I YN++I R+D A ++ P+A TY G+I A A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG-LKPNAFTYGAFISGYIEASEFASA 541
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++EM G + ++ LI+ + + G + +A + + ++ ++ D M
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F N + +A + ++ + + + VL+ K G +A ++FD+M++ PN
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
+N+++ G+ +A ++ + + K + Y II +C++G
Sbjct: 662 VI-----IYNMLLGGFCRSGEIEKA----KELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
L+EA LF+E+ K L PD + TL+D ++ ++ A+ +F G T N
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNA 771
Query: 451 VFDELIKNDKVIDCAHILSKMG----ERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
+ + + K K +L+++ +R KP+ Y ++I LC +G L+ + EL +Q+
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 184/409 (44%), Gaps = 23/409 (5%)
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
+ NIV + +Y V+ C G +D A + + +IA+ P+ V Y L K F+ R
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC-RPNVVIYTTLIKTFLQNSRF 468
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
+A+ +L+EM +G D YN+LI G + +D+A E+ E L + +
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
+ + A D Y M R+ + P V C L+ K GK +A + + M+D
Sbjct: 529 ISGYIEASEFASA-DKYVKEM-RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
++ T+ +++N F K +A FR+ K A DV Y +I+ F
Sbjct: 587 GILG-----DAKTYTVLMNGLFKNDKVDDAEEIFREM----RGKGIAPDVFSYGVLINGF 637
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RV 443
+ G + +A ++F+E+ + L+P+V + L+ + + I+ A ++ M GL
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 444 VTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
VT +C + D K+ + + + +M + PD Y ++ G C +++++ +
Sbjct: 698 VT-YCT-IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT-I 754
Query: 504 YQVMRYGVGVT----NSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPP 548
+ + G + N+L +V + K + + + RL+D + R+ P
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/480 (20%), Positives = 178/480 (37%), Gaps = 79/480 (16%)
Query: 95 IRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF---TQSNI 151
I G ++ A V S P + C ++ A+ R R + LF + + N+
Sbjct: 162 IAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD----LFWDVYKGMVERNV 217
Query: 152 VPNIVSYNNVINTHCDEGRV---------------------DVALELYRHIIATAPFGPS 190
V ++ +Y+ +I HC G V D AL+L +I P
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLV-PL 276
Query: 191 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE------------ 238
TY L G R+ +A LL EM + G D+ Y+ LI G L+
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336
Query: 239 -----------------------LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
G ++KA LFD + L+ A+ +E +
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY---C 393
Query: 276 RDKEAMDSYKSLMD---RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
R+K Y+ L++ R ++P T +++ + G A+ + +M+ + PN
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
+ ++ +F +A+ ++ + A D+ YN++I + +
Sbjct: 454 -----IYTTLIKTFLQNSRFGDAMRVLKEM----KEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
EA + E+ L P+ T+ I Y++ A K M + G+ C +
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG 512
+E K KVI+ M ++ D Y V++ GL +D + E+ ++ G+
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 180/387 (46%), Gaps = 26/387 (6%)
Query: 126 IAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA 185
+ ++YR E + + P++ YN+V++T E R+ + +YR +
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM-KRD 175
Query: 186 PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 245
F P+ TY L K ++ A LL EM NKG D++ Y +IS E+G + +
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 246 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 305
EL + + VY+ ++N E + K A + + ++++ ++ + L+ V
Sbjct: 236 RELAERFEPVVSVYNALINGLCKEHDY-----KGAFELMREMVEKGISPNVISYSTLINV 290
Query: 306 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 365
L G+ A++ QML PN ++S +V CF G +AL + +
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSS-----LVKGCFLRGTTFDALDLWNQM--- 342
Query: 366 SNSKAFAM--DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKM 423
+ F + +V YN ++ FC +G + +A ++F + SP++ T+ +LI+ + K
Sbjct: 343 --IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 424 ERIDDALKVFHRMVDAG----LRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPD 479
+D A+ ++++M+ +G + V TN + + L ++ K + ++ M + + P
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTN----MVEALCRHSKFKEAESLIEIMSKENCAPS 456
Query: 480 PTCYEVVIRGLCAKGLLDKSLELLYQV 506
+ I+GLC G LD + ++ Q+
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 165/404 (40%), Gaps = 25/404 (6%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P V NA+I + + Y A L + I PN++SY+ +IN C+ G++++A
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREM-VEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA--DSLVYNNLIS 234
++ P+ T L KG G +ALDL +M+ +G G + + YN L+
Sbjct: 303 FLTQMLKRGCH-PNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQPNVVAYNTLVQ 360
Query: 235 GFLELGNLDKANELFDELKE-----RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 289
GF GN+ KA +F ++E Y ++N F G A+ + ++
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING-----FAKRGSLDGAVYIWNKMLT 415
Query: 290 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 349
V ++E L +H K +A +L + M + P+ TFN + +
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV-----PTFNAFIKGLCDA 470
Query: 350 GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 409
G+ A FR+ + ++ YN ++ + + EA L E+ + +
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPP---NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527
Query: 410 VPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILS 469
T+ TL+ AL++ +M+ G N + K K A +L
Sbjct: 528 SSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD 587
Query: 470 KM--GERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+ G R +PD Y VI GLC + + LL +++ G+
Sbjct: 588 LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGI 631
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 160/373 (42%), Gaps = 33/373 (8%)
Query: 168 EGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSL 227
E V +AL ++ I + F + +T+ + + G++ LL++M +G
Sbjct: 53 ESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSED 112
Query: 228 VYNNLISGFLELGNLDKANELFDELKE-----RCLVYDGVVNATYMEWFFNNGRDKEAMD 282
++ ++IS + ++G ++A E+F +KE +Y+ V++ R +
Sbjct: 113 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDT-----LLGENRIQMIYM 167
Query: 283 SYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIM 342
Y+ + F+ T NVLL+ L K+ K A L +M + P ++ ++ +
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP-----DAVSYTTV 222
Query: 343 VNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELC 402
++ +G E + ++ F V+ YN +I+ C+ A L E+
Sbjct: 223 ISSMCEVGLVKEG---------RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMV 273
Query: 403 SKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG----LRVVTNFCNRVFDELIKN 458
K +SP+V ++ TLI+ +I+ A +M+ G + +++ F
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF 333
Query: 459 DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLR 518
D + ++ G +P+ Y +++G C+ G + K++ + + +G + ++R
Sbjct: 334 DALDLWNQMIRGFG---LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE--IGCSPNIR 388
Query: 519 EFVTEVFKKAGRG 531
+ + + A RG
Sbjct: 389 TYGSLINGFAKRG 401
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 202/452 (44%), Gaps = 46/452 (10%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P++F N +++A+ + K+++ I+L + I N+ +YN +IN C ++ +AL
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI--- 233
L ++ + PS VT L G+ RI +A+ L+ +M+ G+ D++ + LI
Sbjct: 142 LLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 234 --------------------------------SGFLELGNLDKANELFDELKERCLVYDG 261
+G + G++D A L ++++ + +
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
V+ +T ++ + +A++ + + ++ + +T + L+ L + + + A L
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
M++ PN TFN +++ GK EA K + ++ D+ Y+++
Sbjct: 321 MIERKINPNVV-----TFNALIDAFVKEGKLVEA----EKLYDEMIKRSIDPDIFTYSSL 371
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
I+ FC + L EA+ +FE + SK P+V T+ TLI+ + K +RID+ +++F M GL
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 442 RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLE 501
T + + + + +M P+ Y ++ GLC G L+K++
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 502 LLYQVMRYGVGVTNSLREFVTEVFKKAGRGDE 533
+ + R + T + E KAG+ ++
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 176/396 (44%), Gaps = 18/396 (4%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
RP T +I ++ + +EA+AL Q PN+V+Y V+N C G +D+A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
L + A A + V Y + +AL+L EM NKG + + Y++LIS
Sbjct: 246 NLLNKMEA-AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
A+ L ++ ER + + V ++ F G+ EA Y ++ R
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
T + L+ H + +A +F+ M+ PN T+N ++N + E
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV-----TYNTLINGFCKAKRIDEG 419
Query: 356 LATFRKA---GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 412
+ FR+ G N+ + + G+ +R C+N A+ +F+++ S + P++ T
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQ--ARDCDN-----AQMVFKQMVSDGVHPNIMT 472
Query: 413 HRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMG 472
+ TL+D K +++ A+ VF + + + N + + + K KV D + +
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 473 ERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
+ KPD Y +I G C KGL +++ + L++ MR
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEA-DALFRKMR 567
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 148/322 (45%), Gaps = 11/322 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ SL + D A ++ RP V T +++I+ + +R+++A L +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI-ERK 325
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN+V++N +I+ EG++ A +LY +I + P TY L GF R+ EA
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEA 384
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ M++K + + YN LI+GF + +D+ ELF E+ +R LV + V T +
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
FF A +K ++ +T N LL+ L K+GK +A +F+ + + P
Sbjct: 445 FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 504
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
T+NIM+ GK + F + K DV YN +IS FC GL
Sbjct: 505 IY-----TYNIMIEGMCKAGKVEDGWDLF----CSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 391 LSEAETLFEELCSKSLSPDVPT 412
EA+ LF ++ PD T
Sbjct: 556 KEEADALFRKMREDGPLPDSGT 577
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 143/344 (41%), Gaps = 14/344 (4%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
Y ++ ++D A+ L+ ++ + P PS + L + + L +M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
G + YN LI+ F + A L ++ + V ++ + + + R
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
+A+ +++ ++ +T L+ L H K ++A AL D+M+ PN
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV----- 226
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
T+ ++VN G A K + +V Y+ +I C+ +A L
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKM----EAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDEL 455
F E+ +K + P+V T+ +LI ER DA ++ M++ + VVT N + D
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF--NALIDAF 340
Query: 456 IKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKS 499
+K K+++ + +M +R PD Y +I G C LD++
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 2/146 (1%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LVG + + +A D D A V + P + T N ++ + + +
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
+A+ +F + +S + P I +YN +I C G+V+ +L+ ++ P + Y
Sbjct: 487 EKAMVVFE-YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPDVIIYN 544
Query: 196 HLTKGFISAGRIVEALDLLREMLNKG 221
+ GF G EA L R+M G
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDG 570
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 202/467 (43%), Gaps = 22/467 (4%)
Query: 53 LNAIRPPLQHSPSRDPNAPRLPDSTSAL--------VGPRLNLHNR---VQSLIRAGDLD 101
L RP LQ S + D S + +G + N++ ++ L RAG ++
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 102 AASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNV 161
A + + P V T +I A+ A++ + A +F T + P+ V+Y +
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH-KPDRVTYITL 334
Query: 162 INTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG 221
++ D +D + + + P VT+ L AG EA D L M ++G
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 222 HGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAM 281
+ YN LI G L + LD A ELF ++ + +++++ +G A+
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 282 DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNI 341
++++ + + V CN L L K G+ +A +F + D P +S T+N+
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP-----DSVTYNM 508
Query: 342 MVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 401
M+ +G+ EA+ K ++ DV N++I+ + + EA +F +
Sbjct: 509 MMKCYSKVGEIDEAI----KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 402 CSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKV 461
L P V T+ TL+ K +I +A+++F MV G T N +FD L KND+V
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 462 IDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
+L KM + PD Y +I GL G + +++ +Q+ +
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 188/452 (41%), Gaps = 38/452 (8%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
+ G++D A + + P V N++I +Y+A R +EA +F + + P +
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF-MRMKEMKLKPTV 573
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
V+YN ++ G++ A+EL+ ++ P+ +T+ L + AL +L
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGC-PPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER--------CLVYDGVVNATY 267
+M++ G D YN +I G ++ G + +A F ++K+ C + GVV A+
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASL 692
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
+E D+YK + + + N+ E L+ A A D +
Sbjct: 693 IE------------DAYKIITNFLYNCADQPANLFWEDLIGS---ILAEAGIDNAVSFSE 737
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA------GYNNI 381
+ D +I+V K + +G ++ + F D+ YN +
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNV------SGARTLFEKFTKDLGVQPKLPTYNLL 791
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
I E ++ A+ +F ++ S PDV T+ L+DAY K +ID+ +++ M
Sbjct: 792 IGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHEC 851
Query: 442 RVVTNFCNRVFDELIKNDKVIDCAHILSK-MGERDPKPDPTCYEVVIRGLCAKGLLDKSL 500
T N V L+K V D + M +RD P Y +I GL G L ++
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 501 ELLYQVMRYGVGVTNSLREFVTEVFKKAGRGD 532
+L ++ YG ++ + F KAG D
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 182/422 (43%), Gaps = 38/422 (9%)
Query: 120 FTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYR 179
++ N +I + +++ EA+ ++ + P++ +Y++++ +D + L +
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEG-FRPSLQTYSSLMVGLGKRRDIDSVMGLLK 247
Query: 180 HIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLEL 239
+ T P+ T+ + AG+I EA ++L+ M ++G G D + Y LI
Sbjct: 248 EM-ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 240 GNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM-TPVT 298
LD A E+F+++K D V T ++ F +N RD +++ + S M++ + VT
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN-RDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 299 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS---------------------- 336
+L++ L K G +A+ D M D PN N+
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 337 --------DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 388
T+ + ++ G AL TF K T K A ++ N + +
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT----KGIAPNIVACNASLYSLAKA 481
Query: 389 GLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFC 448
G EA+ +F L L PD T+ ++ Y K+ ID+A+K+ M++ G
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 449 NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
N + + L K D+V + + +M E KP Y ++ GL G + +++EL +++
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 509 YG 510
G
Sbjct: 602 KG 603
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 158/365 (43%), Gaps = 51/365 (13%)
Query: 81 VGPRLNLHNR-VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAI 139
V P+L +N + L+ A ++ A V + P V T N ++ A ++ + +E
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 140 ALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTK 199
L+ T N +++N VI+ G VD AL+LY +++ F P+A TY L
Sbjct: 841 ELYKEMSTHE-CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 200 GFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVY 259
G +GR+ EA L ML+ G + +YN LI+GF + G D A LF + V
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM-----VK 954
Query: 260 DGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALF 319
+GV + + +Y +VL++ L G+ + F
Sbjct: 955 EGV---------------RPDLKTY---------------SVLVDCLCMVGRVDEGLHYF 984
Query: 320 DQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH---EALATFRKAGTKSNSKAFAMDVA 376
++ ++ P+ +N+++N LGK H EAL F + T S+ D+
Sbjct: 985 KELKESGLNPDVVC-----YNLIIN---GLGKSHRLEEALVLFNEMKT---SRGITPDLY 1033
Query: 377 GYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
YN++I G++ EA ++ E+ L P+V T LI Y + + A V+ M
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Query: 437 VDAGL 441
V G
Sbjct: 1094 VTGGF 1098
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 205/494 (41%), Gaps = 76/494 (15%)
Query: 83 PRLNLHNR-VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIAL 141
P L+ +N + L+R LD A + + +PT +T I+ Y K + AL
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT--YIVFIDYYGKSGDSVSAL 453
Query: 142 FHFFFTQSN-IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKG 200
F ++ I PNIV+ N + + GR A +++ + + P +VTY + K
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF-YGLKDIGLVPDSVTYNMMMKC 512
Query: 201 FISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 260
+ G I EA+ LL EM+ G D +V N+LI+ + +D+A ++F +KE L
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 261 GVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD 320
V T + NG+ +EA++ ++ ++ + +T N L + L K+ + T A +
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 321 QMLDNHTPPNFQAVNSDTFNIMVN------ECFNLGKFHE----------ALATFRKAGT 364
+M+D P+ N+ F ++ N CF FH+ L T
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF----FHQMKKLVYPDFVTLCTLLPGVV 688
Query: 365 KSN--------------------SKAFAMDV-------AGYNNIIS---RFCENGLLSEA 394
K++ + F D+ AG +N +S R NG+ +
Sbjct: 689 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748
Query: 395 ET--------------------LFEELCSK-SLSPDVPTHRTLIDAYMKMERIDDALKVF 433
++ LFE+ + P +PT+ LI ++ + I+ A VF
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808
Query: 434 HRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAK 493
++ G N + D K+ K+ + + +M + + + + +VI GL
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 494 GLLDKSLELLYQVM 507
G +D +L+L Y +M
Sbjct: 869 GNVDDALDLYYDLM 882
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 193/505 (38%), Gaps = 81/505 (16%)
Query: 87 LHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
+++ + +L +A +D A + +PTV T N ++A + + + EAI LF
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM- 599
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIA-----------TAPFG------- 188
Q PN +++N + + C V +AL++ ++ T FG
Sbjct: 600 VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 659
Query: 189 ---------------PSAVTYRHLTKGFISAGRIVEALDLLREML-NKGHGADSLVYNNL 232
P VT L G + A I +A ++ L N +L + +L
Sbjct: 660 KEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 233 ISGFLELGNLDKANELFDELKERCLVYDG----------------VVNA-TYMEWFFNNG 275
I L +D A + L + DG V A T E F +
Sbjct: 720 IGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDL 779
Query: 276 RDKEAMDSYKSLM-------------DRQFKMTPVTC-------NVLLEVLLKHGKKTQA 315
+ + +Y L+ D ++ C N LL+ K GK +
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 316 WALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV 375
+ L+ +M + N + T NI+++ G +AL + + + F+
Sbjct: 840 FELYKEMSTHECEAN-----TITHNIVISGLVKAGNVDDALDLYYDL---MSDRDFSPTA 891
Query: 376 AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHR 435
Y +I ++G L EA+ LFE + P+ + LI+ + K D A +F R
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 436 MVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGL 495
MV G+R + + D L +V + H ++ E PD CY ++I GL
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 496 LDKSLELLYQVMRYGVGVTNSLREF 520
L+++L +L+ M+ G+T L +
Sbjct: 1012 LEEAL-VLFNEMKTSRGITPDLYTY 1035
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 130/343 (37%), Gaps = 24/343 (6%)
Query: 154 NIVSYNNVINTHCDEGRVDVALELYRHI---IATAPFGPSAVTYRHLTKGFISAGRIVEA 210
N+V N + RVD LE ++ + TY + K G + +A
Sbjct: 113 NLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQA 172
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA--TYM 268
LR+M G ++ YN LI L+ +A E++ R ++ +G + TY
Sbjct: 173 PYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY-----RRMILEGFRPSLQTYS 227
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQ----FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
G+ ++ +DS L+ K T + + VL + GK +A+ + +M D
Sbjct: 228 SLMVGLGKRRD-IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
P+ T+ ++++ K A F K T + D Y ++ R
Sbjct: 287 EGCGPDVV-----TYTVLIDALCTARKLDCAKEVFEKMKTGRHKP----DRVTYITLLDR 337
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVV 444
F +N L + + E+ PDV T L+DA K +A M D G+
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 445 TNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVI 487
+ N + L++ ++ D + M KP Y V I
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 190/453 (41%), Gaps = 46/453 (10%)
Query: 87 LHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
+H +Q ++A +AA + S F S F CN I + + + A + F
Sbjct: 418 VHTMIQGCLKAESPEAALEIFNDS-FESWIAHGFMCNKIFLLFCKQGKVDAATS-FLKMM 475
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 206
Q I PN+V YNN++ HC +D+A ++ ++ P+ TY L GF
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG-LEPNNFTYSILIDGFFKNKD 534
Query: 207 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 266
A D++ +M A+ ++YN +I+G ++G KA E+ L
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL-------------- 580
Query: 267 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 326
+ ++++ M+ + N +++ +K G A + +M +N
Sbjct: 581 --------------------IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 327 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 386
PN TF ++N + AL + + S +D+ Y +I FC
Sbjct: 621 KSPNVV-----TFTSLINGFCKSNRMDLAL----EMTHEMKSMELKLDLPAYGALIDGFC 671
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTN 446
+ + A TLF EL L P+V + +LI + + ++D A+ ++ +MV+ G+
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 447 FCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
+ D L+K+ + + + S++ + PD + V++ GL KG K+ ++L ++
Sbjct: 732 TYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 507 MRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
+ V L V + G +E RL D
Sbjct: 792 KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHD 824
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 187/450 (41%), Gaps = 53/450 (11%)
Query: 87 LHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
++N + SL+R+ +D A + T ++ A R ++ EA+ +F
Sbjct: 207 VNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVM 266
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 206
++ P+ + ++ + C + +AL+L R + S TY + F+ G
Sbjct: 267 SRG-AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGN 325
Query: 207 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 266
+ EA+ ++ EM+ G + +L++G+ + L KA +LF+ ++E L D V+ +
Sbjct: 326 MEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSV 385
Query: 267 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 326
+EWF N ++A++ Y + + + V + +++ LK A +F+ ++
Sbjct: 386 MVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESW 445
Query: 327 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 386
F M N+ F L FC
Sbjct: 446 IAHGF----------MCNKIFLL-----------------------------------FC 460
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTN 446
+ G + A + + + K + P+V + ++ A+ +M+ +D A +F M++ GL N
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLE-PNN 519
Query: 447 FCNRVF-DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQ 505
F + D KN + ++++M + + + Y +I GLC G K+ E+L
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 506 VM---RYGVGVTNSLREFVTEVFKKAGRGD 532
++ RY + T+ + + F K G D
Sbjct: 580 LIKEKRYSMSCTS--YNSIIDGFVKVGDTD 607
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 163/416 (39%), Gaps = 80/416 (19%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
R ++D A S+ P FT + +I ++ K A + + SN N
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM-NASNFEANE 554
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
V YN +IN C G+ A E+ +++I + S +Y + GF+ G A++ R
Sbjct: 555 VIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYR 614
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
EM G + + + +LI+GF + +D A E+ E+K L D
Sbjct: 615 EMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD--------------- 659
Query: 276 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 335
+ +Y +L+D K K+ KT A+ LF ++ + PN N
Sbjct: 660 -----LPAYGALIDGFCK--------------KNDMKT-AYTLFSELPELGLMPNVSVYN 699
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
S +++ NLGK A+ ++K + + D+ Y +I ++G ++ A
Sbjct: 700 S-----LISGFRNLGKMDAAIDLYKKMV----NDGISCDLFTYTTMIDGLLKDGNINLAS 750
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDEL 455
L+ EL + PD H L++ L
Sbjct: 751 DLYSELLDLGIVPDEILHMVLVNG-----------------------------------L 775
Query: 456 IKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
K + + + +L +M ++D P+ Y VI G +G L+++ L +++ G+
Sbjct: 776 SKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 107/247 (43%), Gaps = 35/247 (14%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFF----- 145
+ ++ GD D+A R + + P V T ++I ++ R + A+ + H
Sbjct: 597 IDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMEL 656
Query: 146 -------------FTQSN----------------IVPNIVSYNNVINTHCDEGRVDVALE 176
F + N ++PN+ YN++I+ + G++D A++
Sbjct: 657 KLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAID 716
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
LY+ ++ TY + G + G I A DL E+L+ G D +++ L++G
Sbjct: 717 LYKKMVNDG-ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGL 775
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ G KA+++ +E+K++ + + ++ +T + G EA + ++++
Sbjct: 776 SKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDD 835
Query: 297 VTCNVLL 303
N+L+
Sbjct: 836 TVFNLLV 842
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 184/419 (43%), Gaps = 32/419 (7%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
R+G + A SV RP + T NA+I A + + +A F ++ + P+
Sbjct: 280 RSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDR 339
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
+++N+++ G + A L+ + +Y L G++ A ++L
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDE-MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILA 398
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
+M K + + Y+ +I GF + G D+A LF E++ + D V T + + G
Sbjct: 399 QMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG 458
Query: 276 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 335
R +EA+D + + K VT N LL K GK + +F +M H PN
Sbjct: 459 RSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLL--- 515
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
T++ +++ G + EA+ FR+ S DV Y+ +I C+NGL+ A
Sbjct: 516 --TYSTLIDGYSKGGLYKEAMEIFREF----KSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMK---MERIDD------------ALKVF-----HR 435
+L +E+ + +SP+V T+ ++IDA+ + M+R D AL +R
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNR 629
Query: 436 MVDAGLRVVTNFCNRVFDELIKNDKVIDCA-HILSKMGERDPKPDPTCYEVVIRGLCAK 493
++ ++ T NR + + + + C + KM + + KP+ + ++ C++
Sbjct: 630 VIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA-CSR 687
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 174/404 (43%), Gaps = 33/404 (8%)
Query: 84 RLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFH 143
R+ ++ + R G +AA ++ T VF+ N ++ A+ + + + A +
Sbjct: 339 RITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILA 398
Query: 144 FFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFIS 203
+ I+PN+VSY+ VI+ GR D AL L+ + V+Y L +
Sbjct: 399 QMPVK-RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTK 456
Query: 204 AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 263
GR EALD+LREM + G D + YN L+ G+ + G D+ ++F E+K ++ + +
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 264 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 323
+T ++ + G KEAM+ ++ + V + L++ L K+G A +L D+M
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 324 DNHTPPNFQAVNS--DTFNIMVN-----ECFNLGKF---HEALATFRKAGTKSNSKAFAM 373
PN NS D F + N G AL+ + + F
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQ 636
Query: 374 DVAGYNNIISRFCENGL--LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALK 431
NN ++ CE G+ LS +F ++ + P+V T +++A + +DA
Sbjct: 637 LTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASM 696
Query: 432 VFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
+ + R+FD +KV H L MG+R+
Sbjct: 697 LLEEL-------------RLFD-----NKVYGVVHGL-LMGQRE 721
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 172/415 (41%), Gaps = 57/415 (13%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ +L R G + A + + TV+ +A+I+A R+ + EAI++F+ +
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM-KEYG 298
Query: 151 IVPNIVSYNNVINTHCDEGRVDVAL------ELYRHIIATAPFGPSAVTYRHLTKGFISA 204
+ PN+V+YN VI+ C +G ++ E+ R+ + P +T+ L
Sbjct: 299 LRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQ-----PDRITFNSLLAVCSRG 352
Query: 205 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 264
G A +L EM N+ D YN L+ + G +D A E+ ++ + ++ + V
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 265 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
+T ++ F GR EA++ + + + V+ N LL + K
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTK---------------- 456
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
+G+ EAL R+ + K DV YN ++
Sbjct: 457 ------------------------VGRSEEALDILREMASVGIKK----DVVTYNALLGG 488
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVV 444
+ + G E + +F E+ + + P++ T+ TLID Y K +A+++F AGLR
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
Query: 445 TNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKS 499
+ + D L KN V ++ +M + P+ Y +I +D+S
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 173/426 (40%), Gaps = 23/426 (5%)
Query: 122 CNAIIAAMYRAKRYNEAIALFHFFFTQ---SNIVPNIVSYNNVINTHCDEGRVDVALELY 178
C II + ++A+ + F + N + S +I+T G+V +A ++
Sbjct: 199 CTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLAS--AMISTLGRYGKVTIAKRIF 256
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
A +G + + L + +G EA+ + M G + + YN +I +
Sbjct: 257 ETAFA-GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK 315
Query: 239 LG-NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 297
G + + FDE++ + D + + + G + A + + + +R+ +
Sbjct: 316 GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF 375
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
+ N LL+ + K G+ A+ + QM PN +++ +++ G+F EAL
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV-----SYSTVIDGFAKAGRFDEALN 430
Query: 358 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
F + A+D YN ++S + + G EA + E+ S + DV T+ L+
Sbjct: 431 LF----GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 418 DAYMKMERIDDALKVFHRMVDAGLRVVTNFC--NRVFDELIKNDKVIDCAHILSKMGERD 475
Y K + D+ KVF M V+ N + + D K + I +
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKRE--HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIE 535
+ D Y +I LC GL+ ++ L+ ++ + G+ + + F GR ++
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF---GRSATMD 601
Query: 536 RLLDFN 541
R D++
Sbjct: 602 RSADYS 607
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 196/472 (41%), Gaps = 41/472 (8%)
Query: 57 RPPLQHSPSRDPNAPRLP---DSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFS 113
RP + S R R+P S + L+ + H SL G L T
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKL----------TKL 170
Query: 114 STRPTVFTCNAIIAAMYRAKRYNEAIALFHFF--------------FTQSNIVPNIVSYN 159
+P V T N ++ + R +EA+ALF + + + P ++++N
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 160 NVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 219
+IN C EGRV A L ++ VTY + G G AL+LL +M
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
D ++Y+ +I + G+ A LF E+ E+ + + ++ F + GR +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
A + +++R+ +T N L+ +K GK +A L D+ML P ++ T+
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP-----DTVTY 404
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
N M+ +F +A F + DV +N II +C + E L
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASP--------DVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKND 459
E+ + L + T+ TLI + +++ ++ A +F M+ G+ T CN + +N+
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 460 KVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
K+ + + + D Y ++I G+C +D++ +L + +GV
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 182/414 (43%), Gaps = 32/414 (7%)
Query: 115 TRP--TVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD 172
+RP T CN +I R R + AI+L+ + I NI S+N +I CD ++
Sbjct: 100 SRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-RIPLNIYSFNILIKCFCDCHKLS 158
Query: 173 VALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA-----DSL 227
+L + + F P VT+ L G RI EAL L M+ G D +
Sbjct: 159 FSLSTFGKLTKLG-FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQM 217
Query: 228 V----------YNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
V +N LI+G G + +A L +++ + L D V T + G
Sbjct: 218 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 277
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
K A++ + + K V + +++ L K G + A LF +ML+ PN
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF----- 332
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
T+N M++ + G++ +A R + + DV +N +IS + G L EAE L
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINP----DVLTFNALISASVKEGKLFEAEKL 388
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
+E+ + + PD T+ ++I + K R DDA +F M A VVT N + D +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM--ASPDVVTF--NTIIDVYCR 444
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+V + +L ++ R + T Y +I G C L+ + +L +++ +GV
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 183/434 (42%), Gaps = 31/434 (7%)
Query: 85 LNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHF 144
+ + + L G + A+++ V T I+ M + A+ L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 145 FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 204
+++I P++V Y+ +I+ C +G A L+ ++ P+ TY + GF S
Sbjct: 287 M-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSF 344
Query: 205 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 264
GR +A LLR+M+ + D L +N LIS ++ G L +A +L DE+ RC+ D V
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 265 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
+ + F + R D K + D VT N +++V + + + L ++
Sbjct: 405 NSMIYGFCKHNR----FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI-- 458
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
N+ T+N +++ + + A F++ S D N ++
Sbjct: 459 ---SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM----ISHGVCPDTITCNILLYG 511
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-- 442
FCEN L EA LFE + + D + +I K ++D+A +F + G+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 443 ------VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLL 496
+++ FC + + D + KM + +PD + Y +IRG G +
Sbjct: 572 VQTYNVMISGFCGK--------SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 497 DKSLELLYQVMRYG 510
DKS+EL+ ++ G
Sbjct: 624 DKSIELISEMRSNG 637
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 144/344 (41%), Gaps = 50/344 (14%)
Query: 98 GDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVS 157
G A + R P V T NA+I+A + + EA L + I P+ V+
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVT 403
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
YN++I C R D A ++ ++A+ P VT+ + + A R+ E + LLRE+
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMF-DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
+G A++ YN LI GF E+ NL+ A +LF E+ + D + + F N +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
+EA++ ++ + + + V N+++ + K K +AW LF + + P+ Q
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT---- 574
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
YN +IS FC +S+A L
Sbjct: 575 ----------------------------------------YNVMISGFCGKSAISDANVL 594
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
F ++ PD T+ TLI +K ID ++++ M G
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LV + + +L+AA + + P TCN ++ ++
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF---GPSAV 192
EA+ LF S I + V+YN +I+ C +VD A +L+ + P P
Sbjct: 519 EEALELFE-VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF----CSLPIHGVEPDVQ 573
Query: 193 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 252
TY + GF I +A L +M + GH D+ YN LI G L+ G +DK+ EL E+
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 253 K 253
+
Sbjct: 634 R 634
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 29/291 (9%)
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 338
+A+D + ++ + T V CN ++ V ++ + A +L+ +M P N +
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS----- 143
Query: 339 FNIMVNECF-NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC----------- 386
FNI++ +CF + K +L+TF K F DV +N ++ C
Sbjct: 144 FNILI-KCFCDCHKLSFSLSTFGKL----TKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 387 -----ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
E G L EA LF+++ L+P V T TLI+ R+ +A + ++MV GL
Sbjct: 199 FGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 442 RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLE 501
+ + + + K ++LSKM E KPD Y +I LC G +
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 502 LLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLL-DFNTPRYRPPQLT 551
L +++ G+ + + F GR + +RLL D P LT
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 184/412 (44%), Gaps = 48/412 (11%)
Query: 134 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI------------ 181
++NEA+ LF +S +P+I+ + ++N + DV + L H+
Sbjct: 52 QFNEALDLFTHM-VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 182 ----------------------IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 219
+ F P VT+ L GF R+ EA+ ++ +M+
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
G D ++Y +I + G+++ A LFD+++ + D V+ + + N+GR ++
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
A + + R+ K +T N L++ +K GK A L+++M+ PN T+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF-----TY 285
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
++N G EA F TK F DV Y ++I+ FC+ + +A +F
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKG---CFP-DVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKND 459
E+ K L+ + T+ TLI + ++ + + A +VF MV G+ N + L N
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 460 KVIDCAHILSKMGERD---PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
KV I M +R+ P+ Y V++ GLC G L+K+L ++++ MR
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKAL-MVFEDMR 452
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 167/359 (46%), Gaps = 24/359 (6%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ SL + G ++ A S+ RP V +++ + + R+ +A +L T+
Sbjct: 184 IDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM-TKRK 242
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P+++++N +I+ EG+ A ELY +I + P+ TY L GF G + EA
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS-IAPNIFTYTSLINGFCMEGCVDEA 301
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ M KG D + Y +LI+GF + +D A ++F E+ ++ L + + T ++
Sbjct: 302 RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG 361
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM----LDNH 326
F G+ A + + ++ R T NVLL L +GK +A +F+ M +D
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 327 TPPNFQAVNSDTFNIMVNE-CFNLGKFHEALATF---RKAGTKSNSKAFAMDVAGYNNII 382
P N T+N++++ C+N GK +AL F RK + + + G
Sbjct: 422 AP------NIWTYNVLLHGLCYN-GKLEKALMVFEDMRKREMDIGIITYTIIIQG----- 469
Query: 383 SRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
C+ G + A LF L SK + P+V T+ T+I + +A +F +M + G+
Sbjct: 470 --MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 172/381 (45%), Gaps = 19/381 (4%)
Query: 100 LDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYN 159
++ A S+ +P V II ++ + N A++LF I P++V Y
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMYT 216
Query: 160 NVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 219
+++N C+ GR A L R + P +T+ L F+ G+ ++A +L EM+
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGM-TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
+ Y +LI+GF G +D+A ++F ++ + D V + + F + +
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
AM + + + +T L++ + GK A +F M+ PPN + T+
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR-----TY 390
Query: 340 NIMVN-ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 398
N++++ C+N GK +AL F K A ++ YN ++ C NG L +A +F
Sbjct: 391 NVLLHCLCYN-GKVKKALMIFEDM-QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Query: 399 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR----VVTNFCNRVFDE 454
E++ + + + T+ +I K ++ +A+ +F + G++ T + +F E
Sbjct: 449 EDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Query: 455 LIKNDKVIDCAHILSKMGERD 475
+K++ AH+L + + D
Sbjct: 509 GLKHE-----AHVLFRKMKED 524
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 161/355 (45%), Gaps = 53/355 (14%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V L R L+ A R S + P+V + N+I++ + + A + F +
Sbjct: 194 VDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL-KCG 252
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+VP++ S+N +IN C G + ALEL + P +VTY L KGF G I A
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+++R+ML+KG D + Y L+ G +LGN+D L
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL--------------------- 350
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVT-CNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
K ++ R F++ + C+V+L L K G+ +A +LF+QM + P
Sbjct: 351 --------------KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSP 396
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS---NSKAFAMDVAGYNNIISRFC 386
+ A ++I+++ LGKF AL + + K NS+ + G C
Sbjct: 397 DLVA-----YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG-------LC 444
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+ G+L EA +L + L S + D+ + +ID Y K I++AL++F +++ G+
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 161/393 (40%), Gaps = 47/393 (11%)
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
T + ++ + R ++ +A+ LF +I P++VS+N++++ +C G VD+A +
Sbjct: 189 TYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
++ PS ++ L G G I EAL+L +M G DS+ YN L GF LG
Sbjct: 248 VLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 306
Query: 241 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT-C 299
+ A E+ ++ ++ L D + + G + K ++ R F++ + C
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 300 NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF 359
+V+L L K G+ EAL+ F
Sbjct: 367 SVMLSGLCKTGR----------------------------------------IDEALSLF 386
Query: 360 RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDA 419
+ + + D+ Y+ +I C+ G A L++E+C K + P+ TH L+
Sbjct: 387 NQM----KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 420 YMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPD 479
+ + +A + ++ +G + N V D K+ + + + + E P
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 480 PTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG 512
+ +I G C + ++ ++L + YG+
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 139/351 (39%), Gaps = 56/351 (15%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P++++Y ++ C G +D+ L L + +++ S + + G GRI EAL
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L +M G D + Y+ +I G +LG D A L+DE+ ++ ++ + + +
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
G EA SL+ + V N++++ K G +A LF +++ P+
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS-- 502
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
VA +N++I +C+ ++
Sbjct: 503 ------------------------------------------VATFNSLIYGYCKTQNIA 520
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
EA + + + L+P V ++ TL+DAY ++ M G+ + +F
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 453 DELIKNDKVIDCAHIL-------SKMGERDPK-----PDPTCYEVVIRGLC 491
L + K +C H+L K G RD + PD Y +I+ LC
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 162/373 (43%), Gaps = 58/373 (15%)
Query: 118 TVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALEL 177
++ C+ +++ + + R +EA++LF+ + P++V+Y+ VI+ C G+ D+AL L
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 178 YRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFL 237
Y + P++ T+ L G G ++EA LL +++ G D ++YN +I G+
Sbjct: 421 YDEMCDKRIL-PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 238 ELGNLDKANELFDELKERCLVYDGVV--NATYMEWFF------NNGRDKEAMD------- 282
+ G +++A ELF + ++ G+ AT+ + N ++ +D
Sbjct: 480 KSGCIEEALELF-----KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL 534
Query: 283 -----SYKSLMD---------------RQFKM-----TPVTCNVLLEVLLKHGKKTQAWA 317
SY +LMD R+ K T VT +V+ + L + K
Sbjct: 535 APSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 318 LFDQMLDNHTPPNFQAVNSD-------TFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 370
+ + + + + S+ T+N ++ + A F + N A
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFV-FLEIMKSRNLDA 653
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
+ A YN +I C G + +A++ L +++S + TLI A+ + A+
Sbjct: 654 SS---ATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 710
Query: 431 KVFHRMVDAGLRV 443
K+FH+++ G V
Sbjct: 711 KLFHQLLHRGFNV 723
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 155/327 (47%), Gaps = 13/327 (3%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P V T +I + + + N A+ LF+ T + PN+V+YN ++ C+ GR A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS-RPNVVTYNALVTGLCEIGRWGDAA 243
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
L R ++ P+ +T+ L F+ G+++EA +L M+ D Y +LI+G
Sbjct: 244 WLLRDMMKR-RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 236 FLELGNLDKANELFDELKERCLVY-DGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 294
G LD+A ++F L ER Y + V+ T + F + R ++ M + + +
Sbjct: 303 LCMYGLLDEARQMF-YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 295 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 354
+T VL++ G+ A +F+QM PP+ + T+N++++ GK +
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR-----TYNVLLDGLCCNGKVEK 416
Query: 355 ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
AL F + +++ Y II C+ G + +A LF L SK + P+V T+
Sbjct: 417 ALMIFEYM----RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGL 441
T+I + + I +A +F +M + G
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKEDGF 499
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 146/324 (45%), Gaps = 11/324 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
++ L + L+ A + + +RP V T NA++ + R+ +A L +
Sbjct: 195 IRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM-KRR 253
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN++++ +I+ G++ A ELY +I + + P TY L G G + EA
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY-PDVFTYGSLINGLCMYGLLDEA 312
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ M G + ++Y LI GF + ++ ++F E+ ++ +V + + ++
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ GR A + + + R+ T NVLL+ L +GK +A +F+ M
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD-- 430
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
+N T+ I++ LGK +A F SK +V Y +IS FC GL
Sbjct: 431 ---INIVTYTIIIQGMCKLGKVEDAFDLF----CSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 391 LSEAETLFEELCSKSLSPDVPTHR 414
+ EA++LF+++ P+ ++
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVYK 507
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 172/411 (41%), Gaps = 12/411 (2%)
Query: 90 RVQSLI-RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQ 148
R+ S+I + D S+ P + TCN ++ + + + A + F +
Sbjct: 88 RLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRA-SCFLGKMMK 146
Query: 149 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 208
P++V++ +++N +C R++ A+ L+ I+ F P+ VTY L + +
Sbjct: 147 LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRHLN 205
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 268
A++L +M G + + YN L++G E+G A L ++ +R + + + +
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 328
+ F G+ EA + Y ++ T L+ L +G +A +F M N
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 329 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 388
P N + +++ + + + F + + K + Y +I +C
Sbjct: 326 P-----NEVIYTTLIHGFCKSKRVEDGMKIFYEM----SQKGVVANTITYTVLIQGYCLV 376
Query: 389 GLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFC 448
G A+ +F ++ S+ PD+ T+ L+D +++ AL +F M + +
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 449 NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKS 499
+ + K KV D + + + KP+ Y +I G C +GL+ ++
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
TCN+++ + + +A +M+ P+ TF ++N + + +A+A
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLV-----TFTSLLNGYCHWNRIEDAIA 174
Query: 358 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
F + F +V Y +I C+N L+ A LF ++ + P+V T+ L+
Sbjct: 175 LFDQI----LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 418 DAYMKMERIDDALKVFHRMVDAGLR--VVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
++ R DA + M+ + V+T + D +K K+++ + + M +
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITF--TALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
PD Y +I GLC GLLD++ ++ Y + R G
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/418 (19%), Positives = 156/418 (37%), Gaps = 83/418 (19%)
Query: 134 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI-IATAPFGPSAV 192
++N+A+ LF S +P+I+ + +++ R DV + L+ + I P P
Sbjct: 63 QFNDALDLFTRM-VHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIP--PLLC 119
Query: 193 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 252
T + + + A L +M+ G D + + +L++G
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG----------------- 162
Query: 253 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 312
Y W R ++A+ + ++ FK VT L+ L K+
Sbjct: 163 --------------YCHW----NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHL 204
Query: 313 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 372
A LF+QM N + PN T+N +V +G++ +A R +
Sbjct: 205 NHAVELFNQMGTNGSRPNVV-----TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP--- 256
Query: 373 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKV 432
+V + +I F + G L EA+ L+ + S+ PDV T+ +LI+ +D+A ++
Sbjct: 257 -NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 433 FHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCA 492
F+ M G P+ Y +I G C
Sbjct: 316 FYLMERNG-----------------------------------CYPNEVIYTTLIHGFCK 340
Query: 493 KGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPPQL 550
++ +++ Y++ + GV + + + GR D + + + + R PP +
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 161/355 (45%), Gaps = 53/355 (14%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V L R L+ A R S + P+V + N+I++ + + A + F +
Sbjct: 194 VDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL-KCG 252
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+VP++ S+N +IN C G + ALEL + P +VTY L KGF G I A
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+++R+ML+KG D + Y L+ G +LGN+D L
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL--------------------- 350
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVT-CNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
K ++ R F++ + C+V+L L K G+ +A +LF+QM + P
Sbjct: 351 --------------KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSP 396
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS---NSKAFAMDVAGYNNIISRFC 386
+ A ++I+++ LGKF AL + + K NS+ + G C
Sbjct: 397 DLVA-----YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG-------LC 444
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+ G+L EA +L + L S + D+ + +ID Y K I++AL++F +++ G+
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 161/393 (40%), Gaps = 47/393 (11%)
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
T + ++ + R ++ +A+ LF +I P++VS+N++++ +C G VD+A +
Sbjct: 189 TYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
++ PS ++ L G G I EAL+L +M G DS+ YN L GF LG
Sbjct: 248 VLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 306
Query: 241 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT-C 299
+ A E+ ++ ++ L D + + G + K ++ R F++ + C
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 300 NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF 359
+V+L L K G+ EAL+ F
Sbjct: 367 SVMLSGLCKTGR----------------------------------------IDEALSLF 386
Query: 360 RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDA 419
+ + + D+ Y+ +I C+ G A L++E+C K + P+ TH L+
Sbjct: 387 NQM----KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 420 YMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPD 479
+ + +A + ++ +G + N V D K+ + + + + E P
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 480 PTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG 512
+ +I G C + ++ ++L + YG+
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 139/351 (39%), Gaps = 56/351 (15%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P++++Y ++ C G +D+ L L + +++ S + + G GRI EAL
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L +M G D + Y+ +I G +LG D A L+DE+ ++ ++ + + +
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC 444
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
G EA SL+ + V N++++ K G +A LF +++ P+
Sbjct: 445 QKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS-- 502
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
VA +N++I +C+ ++
Sbjct: 503 ------------------------------------------VATFNSLIYGYCKTQNIA 520
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
EA + + + L+P V ++ TL+DAY ++ M G+ + +F
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 453 DELIKNDKVIDCAHIL-------SKMGERDPK-----PDPTCYEVVIRGLC 491
L + K +C H+L K G RD + PD Y +I+ LC
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 162/373 (43%), Gaps = 58/373 (15%)
Query: 118 TVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALEL 177
++ C+ +++ + + R +EA++LF+ + P++V+Y+ VI+ C G+ D+AL L
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 178 YRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFL 237
Y + P++ T+ L G G ++EA LL +++ G D ++YN +I G+
Sbjct: 421 YDEM-CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 238 ELGNLDKANELFDELKERCLVYDGVV--NATYMEWFF------NNGRDKEAMD------- 282
+ G +++A ELF + ++ G+ AT+ + N ++ +D
Sbjct: 480 KSGCIEEALELF-----KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL 534
Query: 283 -----SYKSLMD---------------RQFKM-----TPVTCNVLLEVLLKHGKKTQAWA 317
SY +LMD R+ K T VT +V+ + L + K
Sbjct: 535 APSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 318 LFDQMLDNHTPPNFQAVNSD-------TFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 370
+ + + + + S+ T+N ++ + A F + N A
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFV-FLEIMKSRNLDA 653
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
+ A YN +I C G + +A++ L +++S + TLI A+ + A+
Sbjct: 654 SS---ATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 710
Query: 431 KVFHRMVDAGLRV 443
K+FH+++ G V
Sbjct: 711 KLFHQLLHRGFNV 723
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 157/359 (43%), Gaps = 9/359 (2%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+IV+ N+++N C R+ A+ L ++ + P VT+ L G + EA+
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L+ M+ KG D + Y +I+G + G D A L +++++ + D V+ T ++
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
+A D + + + K T N L+ L +G+ + A L ML+ + P+
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
FN +++ GK EA + + SK DV YN +I FC+ +
Sbjct: 322 F-----FNALIDAFVKEGKLVEAEKLYDEM---VKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
E +F E+ + L + T+ TLI + + D+A VF +MV G+ N +
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
D L N V + M +RD K D Y +I LC G ++ +L + GV
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 139/337 (41%), Gaps = 55/337 (16%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L + +D A + +P VFT N +I+ + R+++A L + N
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML-EKN 315
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P++V +N +I+ EG++ A +LY ++ + P V Y L KGF R+ E
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV-----VNA 265
+++ REM +G +++ Y LI GF + + D A +F ++ V DGV
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-----VSDGVHPDIMTYN 430
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
++ NNG + A+ ++ + R K+ VT ++E L K GK W LF +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
PN V Y ++S F
Sbjct: 491 GVKPN--------------------------------------------VVTYTTMMSGF 506
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMK 422
C GL EA+ LF E+ P+ T+ TLI A ++
Sbjct: 507 CRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 179/400 (44%), Gaps = 22/400 (5%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P++ T N+++ R +EA+AL + P+ V++ +++ + A+
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQM-VEMGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L ++ P VTY + G G AL+LL +M AD ++YN +I G
Sbjct: 202 LVERMVVKGC-QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ ++D A +LF++++ + + D + N GR +A ++++
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDN-HTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
V N L++ +K GK +A L+D+M+ + H P+ A +N ++ + E
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA-----YNTLIKGFCKYKRVEEG 375
Query: 356 LATFRKA---GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 412
+ FR+ G N+ + + G+ +R C+N A+ +F+++ S + PD+ T
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQ--ARDCDN-----AQMVFKQMVSDGVHPDIMT 428
Query: 413 HRTLIDAYMKMERIDDALKVFHRMV--DAGLRVVTNFCNRVFDELIKNDKVIDCAHILSK 470
+ L+D ++ AL VF M D L +VT + + L K KV D +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY--TTMIEALCKAGKVEDGWDLFCS 486
Query: 471 MGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
+ + KP+ Y ++ G C KGL +++ L ++ G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 2/178 (1%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LVG + + +A D D A V + P + T N ++ +
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
A+ +F + + ++ +IV+Y +I C G+V+ +L+ ++ P+ VTY
Sbjct: 443 ETALVVFE-YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS-LSLKGVKPNVVTYT 500
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
+ GF G EA L EM G +S YN LI L G+ + EL E++
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 134/344 (38%), Gaps = 44/344 (12%)
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
+L++ + ++ +A+ L +M+ + ++ L+S ++ D L ++++
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 256 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 315
+ ++ + ++ +F + A+ +M + + VT N LL + ++A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 316 WALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV 375
AL DQM++ P+ + TF +V+ F K EA+A + K D+
Sbjct: 165 VALVDQMVEMGYQPD-----TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP----DL 215
Query: 376 AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHR 435
Y +I+ C+ G A L ++ + DV + T+ID K + +DDA +F+
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN- 274
Query: 436 MVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGL 495
KM + KPD Y +I LC G
Sbjct: 275 ----------------------------------KMETKGIKPDVFTYNPLISCLCNYGR 300
Query: 496 LDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
+ LL ++ + + + F K G+ E E+L D
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 171/392 (43%), Gaps = 17/392 (4%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P V ++ + +A R +AI + + S I+P+ +Y ++N C G V A+
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVS-SGIIPDASAYTYLVNQLCKRGNVGYAM 161
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
+L + + + VTY L +G G + ++L + ++ KG ++ Y+ L+
Sbjct: 162 QLVEKM-EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 236 FLELGNLDKANELFDELKERCLVYDG----VVNATYMEWFFNNGRDKEAMDSYKSLMDRQ 291
+ D+A +L DE+ +V G V + F GR +AM ++ L +
Sbjct: 221 AYKERGTDEAVKLLDEI----IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG 276
Query: 292 FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 351
FK V+ N+LL L G+ +A +L +M P+ T+NI++N G+
Sbjct: 277 FKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVV-----TYNILINSLAFHGR 331
Query: 352 FHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVP 411
+AL ++ +K N + F + YN +I+R C+ G + +E+ + P+
Sbjct: 332 TEQALQVLKEM-SKGNHQ-FRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEG 389
Query: 412 THRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKM 471
T+ + ++ +A + + + +F V L + +L +M
Sbjct: 390 TYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEM 449
Query: 472 GERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
PD Y +IRGLC +G+ ++E+L
Sbjct: 450 TRCGFDPDAHTYSALIRGLCLEGMFTGAMEVL 481
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 153/354 (43%), Gaps = 45/354 (12%)
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
T NA++ + N+++ Q + PN +Y+ ++ E D A++L
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLM-QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDE 236
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
II P+ V+Y L GF GR +A+ L RE+ KG A+ + YN L+ G
Sbjct: 237 IIVKGG-EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 295
Query: 241 NLDKANELFDELK--ER---CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM--DRQFK 293
++AN L E+ +R + Y+ ++N+ +GR ++A+ K + + QF+
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAF-----HGRTEQALQVLKEMSKGNHQFR 350
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN---FQAVNSDT-FNIMVNECFNL 349
+T + N ++ L K GK D+M+ PN + A+ S N V E F +
Sbjct: 351 VTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYI 410
Query: 350 GK------------FHEALAT--FRKAGT--------KSNSKAFAMDVAGYNNIISRFCE 387
+ F++++ T RK T + F D Y+ +I C
Sbjct: 411 IQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCL 470
Query: 388 NGLLS---EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD 438
G+ + E ++ EE S++ P V +I K+ R D A++VF MV+
Sbjct: 471 EGMFTGAMEVLSIMEE--SENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVE 522
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
LS++ + E L + P+V L+ K R+ A++V MV +G+ +
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 451 VFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
+ ++L K V ++ KM + + Y ++RGLC G L++SL+ + ++M+ G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 511 VGVTNSLREFVTEVFKKAGRGDEIERLLD 539
+ F+ E K DE +LLD
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLD 235
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 189/459 (41%), Gaps = 58/459 (12%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ +RA L+ A P V T N +I R EAI L ++
Sbjct: 284 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKG- 342
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLT------------ 198
+P+ VSY ++ C E R+ +L + + P VTY L
Sbjct: 343 CLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEA 402
Query: 199 ---------KGF--------------ISAGRIVEALDLLREMLNKGHG-ADSLVYNNLIS 234
KGF GR+ EA DL+ EML+KGH D + Y +++
Sbjct: 403 LWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVN 462
Query: 235 GFLELGNLDKANELFDEL-----KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 289
GF LG +DKA +L + K + Y ++N G+ EA + +
Sbjct: 463 GFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNG-----MCRTGKSLEAREMMNMSEE 517
Query: 290 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 349
+ +T +V++ L + GK ++A + +M+ P + N+++
Sbjct: 518 HWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI-----NLLLQSLCRD 572
Query: 350 GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 409
G+ HEA RK + +K A++V + +I FC+N L A ++ +++ + D
Sbjct: 573 GRTHEA----RKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHAD 628
Query: 410 VPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILS 469
V T+ TL+D K RI +A ++ +M+ G+ V + KV D IL
Sbjct: 629 VFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILE 688
Query: 470 KMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
KM R + T Y VI LC G L+++ LL +V+R
Sbjct: 689 KMISR--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLR 725
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 158/364 (43%), Gaps = 25/364 (6%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P V T A++ R ++A L T + PN VSY ++N C G+ A E
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH-KPNTVSYTALLNGMCRTGKSLEARE 510
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+ ++ + P+++TY + G G++ EA D++REM+ KG + N L+
Sbjct: 511 MM-NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSL 569
Query: 237 LELGNLDKANELFDE-LKERCLVYDGVVN-ATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 294
G +A + +E L + C + VVN T + F N + +D+ S++D + +
Sbjct: 570 CRDGRTHEARKFMEECLNKGCAI--NVVNFTTVIHGFCQN----DELDAALSVLDDMYLI 623
Query: 295 TP----VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLG 350
T L++ L K G+ +A L +ML P T+ +++ +G
Sbjct: 624 NKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT-----PVTYRTVIHRYCQMG 678
Query: 351 KFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 410
K + +A K ++ + YN +I + C G L EA+TL ++ + D
Sbjct: 679 KVDDLVAILEKMISRQKCRTI------YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDA 732
Query: 411 PTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSK 470
T L++ Y+K A KV RM + L C ++ L+ KV + ++ +
Sbjct: 733 KTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLR 792
Query: 471 MGER 474
+ ER
Sbjct: 793 LVER 796
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 148/353 (41%), Gaps = 19/353 (5%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V R G++D A + + +P + A++ M R + EA + + +
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS-EEHW 519
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
PN ++Y+ +++ EG++ A ++ R ++ F P V L + GR EA
Sbjct: 520 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF-PGPVEINLLLQSLCRDGRTHEA 578
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ E LNKG + + + +I GF + LD A + D++ D T ++
Sbjct: 579 RKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDT 638
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
GR EA + K ++ + TPVT ++ + GK A+ ++M+
Sbjct: 639 LGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT 698
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
+N ++ + LGK EA L + ++S++K + GY +
Sbjct: 699 I-------YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY-------LK 744
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
G+ A + + +++L PDV L + ++D+A K+ R+V+ G
Sbjct: 745 KGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 148/346 (42%), Gaps = 26/346 (7%)
Query: 201 FISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 260
+ AG++ +AL +L M G + L+ N I F+ L+KA + ++ +V +
Sbjct: 252 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 311
Query: 261 GVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD 320
V + + + R +EA++ + + + V+ ++ L K + + L
Sbjct: 312 VVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371
Query: 321 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN 380
+M H Q T+N +++ EAL + A K F +D GY+
Sbjct: 372 KMAKEHGLVPDQV----TYNTLIHMLTKHDHADEALWFLKDA----QEKGFRIDKLGYSA 423
Query: 381 IISRFCENGLLSEAETLFEELCSKSLS-PDVPTHRTLIDAYMKMERIDDALKVFHRMVDA 439
I+ C+ G +SEA+ L E+ SK PDV T+ +++ + ++ +D A K+ M
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 440 GLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKS 499
G + T + + + + K ++ +++ E P+ Y V++ GL +G L ++
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 543
Query: 500 LELLYQVMRYGV-----------------GVTNSLREFVTEVFKKA 528
+++ +++ G G T+ R+F+ E K
Sbjct: 544 CDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 198/439 (45%), Gaps = 25/439 (5%)
Query: 102 AASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNV 161
AA +++ TF P N++I ++ ++L + + P++ + N +
Sbjct: 77 AARTLSAMCTFGVV-PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVL 135
Query: 162 INTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG 221
I++ C GR+ A+ L R+ + + VTY + G G EA L EM+ G
Sbjct: 136 IHSFCKVGRLSFAISLLRNRVISI----DTVTYNTVISGLCEHGLADEAYQFLSEMVKMG 191
Query: 222 HGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAM 281
D++ YN LI GF ++GN +A L DE+ E L+ ++ ++Y +N +EA
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSY----YNLHAIEEA- 246
Query: 282 DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNI 341
Y+ ++ F VT + ++ L K GK + L +M + PN T+
Sbjct: 247 --YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHV-----TYTT 299
Query: 342 MVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 401
+V+ F + ALA + + + +D+ Y ++ + G L EAE F+ L
Sbjct: 300 LVDSLFKANIYRHALALYSQMVV----RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 355
Query: 402 CSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDELIKND 459
+ P+V T+ L+D K + A + +M++ + VVT + + + +K
Sbjct: 356 LEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY--SSMINGYVKKG 413
Query: 460 KVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLRE 519
+ + +L KM +++ P+ Y VI GL G + ++EL ++ GV N + +
Sbjct: 414 MLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILD 473
Query: 520 FVTEVFKKAGRGDEIERLL 538
+ K+ GR E++ L+
Sbjct: 474 ALVNHLKRIGRIKEVKGLV 492
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 166/439 (37%), Gaps = 48/439 (10%)
Query: 87 LHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFF- 145
L+ + S + G L A S+ R+ S T N +I+ + +EA + F
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLRNRVIS---IDTVTYNTVISGLCEHGLADEA---YQFLS 185
Query: 146 -FTQSNIVPNIVSYNNVINTHCDEGR-------VDVALEL-------------------- 177
+ I+P+ VSYN +I+ C G VD EL
Sbjct: 186 EMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEE 245
Query: 178 -YRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
YR ++ + F P VT+ + G+++E LLREM + + Y L+
Sbjct: 246 AYRDMVMSG-FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 304
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ A L+ ++ R + D VV M+ F G +EA ++K L++
Sbjct: 305 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV 364
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
VT L++ L K G + A + QML+ PN T++ M+N G EA+
Sbjct: 365 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV-----TYSSMINGYVKKGMLEEAV 419
Query: 357 ATFRKAGTKSNS-KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+ RK ++ F Y +I + G A L +E+ + +
Sbjct: 420 SLLRKMEDQNVVPNGFT-----YGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
L++ ++ RI + + MV G+ + + D K +M ER
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 476 PKPDPTCYEVVIRGLCAKG 494
D Y V+I G+ G
Sbjct: 535 MPWDVVSYNVLISGMLKFG 553
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 144/340 (42%), Gaps = 49/340 (14%)
Query: 226 SLVYNNLISGFL-ELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMD-- 282
SL+ N++ G L E G +++A + +++ ++ + N T F + + D
Sbjct: 607 SLMSCNIVVGMLCENGKMEEAIHILNQM----MLMEIHPNLTTYRIFLDTSSKHKRADAI 662
Query: 283 --SYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 340
++++L+ K++ N L+ L K G +A + M P+ + TFN
Sbjct: 663 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD-----TVTFN 717
Query: 341 IMVNECFNLGKFHEALATFR---KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
+++ F +AL+T+ +AG N VA YN II + GL+ E +
Sbjct: 718 SLMHGYFVGSHVRKALSTYSVMMEAGISPN-------VATYNTIIRGLSDAGLIKEVDKW 770
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
E+ S+ + PD T+ LI K+ + ++ ++ M+ GL T+ N + E
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLC-------------------AKGLLDK 498
K++ +L +MG+R P+ + Y +I GLC AKGLL +
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKE 890
Query: 499 SLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLL 538
+E G N +++ F K G + ER L
Sbjct: 891 MVE------EKGYIPCNQTIYWISAAFSKPGMKVDAERFL 924
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 126/330 (38%), Gaps = 50/330 (15%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
+ GD + + +P++ +CN ++ + + EAI + + I PN+
Sbjct: 585 KQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME-IHPNL 643
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
+Y ++T R D A+ H T
Sbjct: 644 TTYRIFLDTSSKHKRAD------------------AIFKTHET----------------- 668
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
+L+ G VYN LI+ +LG KA + +++ R + D V + M +F
Sbjct: 669 -LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGS 727
Query: 276 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG--KKTQAWALFDQMLDNHTPPNFQA 333
++A+ +Y +M+ T N ++ L G K+ W L + P +F
Sbjct: 728 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW-LSEMKSRGMRPDDF-- 784
Query: 334 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 393
T+N +++ +G ++ + + + + YN +IS F G + +
Sbjct: 785 ----TYNALISGQAKIGNMKGSMTIY----CEMIADGLVPKTSTYNVLISEFANVGKMLQ 836
Query: 394 AETLFEELCSKSLSPDVPTHRTLIDAYMKM 423
A L +E+ + +SP+ T+ T+I K+
Sbjct: 837 ARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 8/214 (3%)
Query: 47 LRIEPPLNAIRPPLQHSPSRDPNAPRLPDSTSALVGPRLNLHNRV-----QSLIRAGDLD 101
+ I P L R L S S+ A + + L+ + L +V +L + G
Sbjct: 637 MEIHPNLTTYRIFLDTS-SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTK 695
Query: 102 AASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNV 161
A+ V P T N+++ + +A++ + ++ I PN+ +YN +
Sbjct: 696 KAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM-EAGISPNVATYNTI 754
Query: 162 INTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG 221
I D G + ++ + + + P TY L G G + ++ + EM+ G
Sbjct: 755 IRGLSDAGLIK-EVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG 813
Query: 222 HGADSLVYNNLISGFLELGNLDKANELFDELKER 255
+ YN LIS F +G + +A EL E+ +R
Sbjct: 814 LVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 847
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 195/461 (42%), Gaps = 56/461 (12%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V S +AG ++ A P V T A+I A +AK+ + A LF ++
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE-G 583
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF---------------GPSAVTYR 195
+PNIV+Y+ +I+ HC G+V+ A +++ + + P+ VTY
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
L GF + R+ EA LL M +G + +VY+ LI G ++G LD+A E+ E+ E
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 256 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 315
++ ++ +F R A +++ V +++ L K GK +A
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 316 WALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS------- 368
+ L M + PN T+ M++ +GK L + G+K +
Sbjct: 764 YKLMQMMEEKGCQPNVV-----TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 369 -------KAFAMDV-----------------AGYNNIISRFCENGLLSEAETLFEELCSK 404
K A+DV AGY +I F N E+ L +E+
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQD 876
Query: 405 SLSPDVPTHRTLIDAYMKMERIDDALKVFHRMV--DAGLRVVTNFCNRVFDELIKNDKVI 462
+P + +R LID +K +R++ AL++ + A L ++ N + + L +KV
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936
Query: 463 DCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
+ S+M ++ P+ + +I+GL + ++L LL
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 207/508 (40%), Gaps = 77/508 (15%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+Q+ ++A LD+AS + R + ++ R FT ++ + ++ EA+ L N
Sbjct: 242 IQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE----TEN 297
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKG---------- 200
VP+ V Y +I+ C+ + A++ + AT+ P+ VTY L G
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRC 356
Query: 201 -------------------------FISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
+ ++G A LL++M+ GH +VYN LI
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 236 F------LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 289
L LD A + + E+ +V + + +++ + G+ ++A + ++
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 290 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 349
+ F T + +L L K A+ LF++M + T+ IMV+
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY-----TYTIMVDSFCKA 531
Query: 350 GKFHEALATF---RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 406
G +A F R+ G N V Y +I + + +S A LFE + S+
Sbjct: 532 GLIEQARKWFNEMREVGCTPN-------VVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 407 SPDVPTHRTLIDAYMKMERIDDALKVFHRM--------VDAGLRVVTNFCNR-------- 450
P++ T+ LID + K +++ A ++F RM VD + + R
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 451 VFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
+ D K+ +V + +L M +P+ Y+ +I GLC G LD++ E+ ++ +G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 511 VGVTNSLREFVTEVFKKAGRGDEIERLL 538
T + + + K R D ++L
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVL 732
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 164/372 (44%), Gaps = 28/372 (7%)
Query: 152 VPNIVSYNNVINTHCDEGR------VDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 205
+P V YN +I + C + +D+A + Y ++A A + + T+ SAG
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA-AGVVLNKINVSSFTRCLCSAG 462
Query: 206 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 265
+ +A ++REM+ +G D+ Y+ +++ ++ A LF+E+K LV D
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQML 323
++ F G ++A + + R+ TP VT L+ LK K + A LF+ ML
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 324 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF-RKAGTKS-----------NSKAF 371
PN T++ +++ G+ +A F R G+K + +
Sbjct: 581 SEGCLPNIV-----TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 372 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALK 431
+V Y ++ FC++ + EA L + + + P+ + LID K+ ++D+A +
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 432 VFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLC 491
V M + G + + D K + + +LSKM E P+ Y +I GLC
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 492 AKGLLDKSLELL 503
G D++ +L+
Sbjct: 756 KVGKTDEAYKLM 767
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 196/472 (41%), Gaps = 41/472 (8%)
Query: 57 RPPLQHSPSRDPNAPRLP---DSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFS 113
RP + S R R+P S + L+ + H SL G L T
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKL----------TKL 170
Query: 114 STRPTVFTCNAIIAAMYRAKRYNEAIALFHFF--------------FTQSNIVPNIVSYN 159
+P V T N ++ + R +EA+ALF + + + P ++++N
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 160 NVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 219
+IN C EGRV A L ++ VTY + G G AL+LL +M
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
D ++Y+ +I + G+ A LF E+ E+ + + ++ F + GR +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
A + +++R+ +T N L+ +K GK +A L D+ML P ++ T+
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP-----DTVTY 404
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
N M+ +F +A F + DV +N II +C + E L
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASP--------DVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKND 459
E+ + L + T+ TLI + +++ ++ A +F M+ G+ T CN + +N+
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 460 KVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
K+ + + + D Y ++I G+C +D++ +L + +GV
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 182/414 (43%), Gaps = 32/414 (7%)
Query: 115 TRP--TVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD 172
+RP T CN +I R R + AI+L+ + I NI S+N +I CD ++
Sbjct: 100 SRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-RIPLNIYSFNILIKCFCDCHKLS 158
Query: 173 VALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA-----DSL 227
+L + + F P VT+ L G RI EAL L M+ G D +
Sbjct: 159 FSLSTFGKLTKLG-FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQM 217
Query: 228 V----------YNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
V +N LI+G G + +A L +++ + L D V T + G
Sbjct: 218 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 277
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
K A++ + + K V + +++ L K G + A LF +ML+ PN
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF----- 332
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
T+N M++ + G++ +A R + + DV +N +IS + G L EAE L
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINP----DVLTFNALISASVKEGKLFEAEKL 388
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
+E+ + + PD T+ ++I + K R DDA +F M A VVT N + D +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM--ASPDVVTF--NTIIDVYCR 444
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+V + +L ++ R + T Y +I G C L+ + +L +++ +GV
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 183/434 (42%), Gaps = 31/434 (7%)
Query: 85 LNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHF 144
+ + + L G + A+++ V T I+ M + A+ L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 145 FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 204
+++I P++V Y+ +I+ C +G A L+ ++ P+ TY + GF S
Sbjct: 287 M-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYNCMIDGFCSF 344
Query: 205 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 264
GR +A LLR+M+ + D L +N LIS ++ G L +A +L DE+ RC+ D V
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 265 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
+ + F + R D K + D VT N +++V + + + L ++
Sbjct: 405 NSMIYGFCKHNR----FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI-- 458
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
N+ T+N +++ + + A F++ S D N ++
Sbjct: 459 ---SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM----ISHGVCPDTITCNILLYG 511
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-- 442
FCEN L EA LFE + + D + +I K ++D+A +F + G+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 443 ------VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLL 496
+++ FC + + D + KM + +PD + Y +IRG G +
Sbjct: 572 VQTYNVMISGFCGK--------SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 497 DKSLELLYQVMRYG 510
DKS+EL+ ++ G
Sbjct: 624 DKSIELISEMRSNG 637
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 143/339 (42%), Gaps = 50/339 (14%)
Query: 103 ASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVI 162
A + R P V T NA+I+A + + EA L + I P+ V+YN++I
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVTYNSMI 408
Query: 163 NTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGH 222
C R D A ++ ++A+ P VT+ + + A R+ E + LLRE+ +G
Sbjct: 409 YGFCKHNRFDDAKHMF-DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 223 GADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMD 282
A++ YN LI GF E+ NL+ A +LF E+ + D + + F N + +EA++
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 283 SYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIM 342
++ + + + V N+++ + K K +AW LF + + P+ Q
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT--------- 574
Query: 343 VNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELC 402
YN +IS FC +S+A LF ++
Sbjct: 575 -----------------------------------YNVMISGFCGKSAISDANVLFHKMK 599
Query: 403 SKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
PD T+ TLI +K ID ++++ M G
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LV + + +L+AA + + P TCN ++ ++
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF---GPSAV 192
EA+ LF S I + V+YN +I+ C +VD A +L+ + P P
Sbjct: 519 EEALELFE-VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF----CSLPIHGVEPDVQ 573
Query: 193 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 252
TY + GF I +A L +M + GH D+ YN LI G L+ G +DK+ EL E+
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 253 K 253
+
Sbjct: 634 R 634
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 29/291 (9%)
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 338
+A+D + ++ + T V CN ++ V ++ + A +L+ +M P N +
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS----- 143
Query: 339 FNIMVNECF-NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC----------- 386
FNI++ +CF + K +L+TF K F DV +N ++ C
Sbjct: 144 FNILI-KCFCDCHKLSFSLSTFGKL----TKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 387 -----ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
E G L EA LF+++ L+P V T TLI+ R+ +A + ++MV GL
Sbjct: 199 FGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 442 RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLE 501
+ + + + K ++LSKM E KPD Y +I LC G +
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 502 LLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLL-DFNTPRYRPPQLT 551
L +++ G+ + + F GR + +RLL D P LT
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 191/458 (41%), Gaps = 52/458 (11%)
Query: 85 LNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTV--FTCNAIIAAMYRAKRYNEAIALF 142
L + + + G++D A V T + F C+A+I+ + + A+ F
Sbjct: 135 LTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFF 194
Query: 143 HFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFI 202
+VPN+V+Y +++ C G+VD +L R + F V Y + G+
Sbjct: 195 ESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR-LEDEGFEFDCVFYSNWIHGYF 253
Query: 203 SAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV 262
G +V+AL REM+ KG D + Y+ LI G + GN+++A L + ++ +GV
Sbjct: 254 KGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGK-----MIKEGV 308
Query: 263 VNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM 322
+ +T ++ L K GK +A+ LF+++
Sbjct: 309 ------------------------------EPNLITYTAIIRGLCKMGKLEEAFVLFNRI 338
Query: 323 LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNII 382
L V+ + +++ G + A + + + YN +I
Sbjct: 339 LSVGIE-----VDEFLYVTLIDGICRKGNLNRAFSMLGDM----EQRGIQPSILTYNTVI 389
Query: 383 SRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR 442
+ C G +SEA+ + SK + DV T+ TL+D+Y+K++ ID L++ R ++A +
Sbjct: 390 NGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIP 444
Query: 443 VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
+ CN + + + + M E D PD Y +I+G C G ++++LE+
Sbjct: 445 MDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEM 504
Query: 503 LYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDF 540
++ + V + + KK E L++
Sbjct: 505 FNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIEL 542
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 114/513 (22%), Positives = 197/513 (38%), Gaps = 78/513 (15%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ + R G+L+ A S+ +P++ T N +I + A R +EA +
Sbjct: 354 IDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV------SKG 407
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT-------------------APFG--- 188
+V ++++Y+ +++++ +D LE+ R + +G
Sbjct: 408 VVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEAD 467
Query: 189 ------------PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
P TY + KG+ G+I EAL++ E L K + ++ YN +I
Sbjct: 468 ALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE-LRKSSVSAAVCYNRIIDAL 526
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ G LD A E+ EL E+ L D + T + NG DK + L +
Sbjct: 527 CKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCL 586
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQM-----------------------LD------NHT 327
N + +L K G A ++ M LD N
Sbjct: 587 GMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAG 646
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEAL--ATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
+++ + I++N G +AL +F K S+ ++ YN++I+
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAK------SRGVTLNTITYNSLINGL 700
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVT 445
C+ G L EA LF+ L + L P T+ LID K DA K+ MV GL
Sbjct: 701 CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 760
Query: 446 NFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQ 505
N + D K + D ++S+ PD +I+G C KG ++++L + +
Sbjct: 761 IIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 820
Query: 506 VMRYGVGVTNSLREFVTEVFKKAGRGDEIERLL 538
+ F+ + F GR +E LL
Sbjct: 821 FKDKNISADFFGFLFLIKGFCTKGRMEEARGLL 853
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/522 (19%), Positives = 216/522 (41%), Gaps = 77/522 (14%)
Query: 75 DSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKR 134
+ + +VG + + S I+ ++DA + R + + CN ++ A
Sbjct: 403 EVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGA 462
Query: 135 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 194
Y EA AL+ + ++ P+ +Y +I +C G+++ ALE++ + ++ +AV Y
Sbjct: 463 YGEADALYRAM-PEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV--SAAVCY 519
Query: 195 RHLTKGFISAGRIVEALDLLREMLNKG-----------------HGADS----LVY---- 229
+ G + A ++L E+ KG +G D LVY
Sbjct: 520 NRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQ 579
Query: 230 ----------NNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
N+ I + G+ + A E++ ++ + L +T ++ +N R
Sbjct: 580 LNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTV--TFPSTILKTLVDNLR--- 634
Query: 280 AMDSYKSLMD----RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 335
++D+Y +++ M + +++ L K G +A L + +N
Sbjct: 635 SLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLC-----SFAKSRGVTLN 689
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
+ T+N ++N G EAL F + N +V Y +I C+ GL +AE
Sbjct: 690 TITYNSLINGLCQQGCLVEALRLF---DSLENIGLVPSEVT-YGILIDNLCKEGLFLDAE 745
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--------RVVTNF 447
L + + SK L P++ + +++D Y K+ + +DA++V R + + ++ +
Sbjct: 746 KLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGY 805
Query: 448 CNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
C K + + + ++ +++ D + +I+G C KG ++++ LL +++
Sbjct: 806 C--------KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Query: 508 RYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPPQ 549
V+ S+ + + V + + I L + R PQ
Sbjct: 858 -----VSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQ 894
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 169/388 (43%), Gaps = 17/388 (4%)
Query: 113 SSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD 172
S PT+ + + + +YR +++N I F+ I N Y+ V + R +
Sbjct: 20 SGFSPTLNSIDRFLRYLYRLQKFN-CILQFYSQLDSKQININHRIYSIVSWAFLNLNRYE 78
Query: 173 VALELYRHIIATAPFGPSAVTYRHLTKGF-ISAGRIVEALDLLREMLNKGHGA--DSLVY 229
A + I+ A P L GF I+ + L +LR+ L + HGA SL +
Sbjct: 79 DAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCL-RNHGAFPSSLTF 137
Query: 230 NNLISGFLELGNLDKANELFDELKERCLVY--DGVVNATYMEWFFNNGRDKEAMDSYKSL 287
+LI F+E G +D A E+ + + + + Y D V + + F G+ + A+ ++S
Sbjct: 138 CSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESA 197
Query: 288 MDRQFKM-TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC 346
+D + VT L+ L + GK + L ++ D F V + ++
Sbjct: 198 VDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDE--GFEFDCVFYSNW---IHGY 252
Query: 347 FNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 406
F G +AL R+ K ++ DV Y+ +I + G + EA L ++ + +
Sbjct: 253 FKGGALVDALMQDREMVEKGMNR----DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 407 SPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAH 466
P++ T+ +I KM ++++A +F+R++ G+ V + D + + +
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 467 ILSKMGERDPKPDPTCYEVVIRGLCAKG 494
+L M +R +P Y VI GLC G
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAG 396
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 184/402 (45%), Gaps = 15/402 (3%)
Query: 95 IRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPN 154
IR LD + + H P++ + +++A+ + K+Y+ I L+ I N
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHN 115
Query: 155 IVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLL 214
+ + N ++N C ++ +AL +I PS VT+ L GF R+ +AL +
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 215 REMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNN 274
+M+ G+ + ++YN +I G + +D A +L + +++ + D V + + ++
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 275 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 334
GR +A + R+ T N L++ +K G+ ++A +++M+ P+
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV-- 292
Query: 335 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
T+++++ + EA F G + F DV Y+ +I+ +C++ +
Sbjct: 293 ---TYSLLIYGLCMYSRLDEAEEMF---GFMVSKGCFP-DVVTYSILINGYCKSKKVEHG 345
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--VVTNFCNRVF 452
LF E+ + + + T+ LI Y + +++ A ++F RMV G+ ++T N +
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY--NVLL 403
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKG 494
L N K+ IL+ M + D Y ++IRG+C G
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 162/380 (42%), Gaps = 21/380 (5%)
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
TCN ++ R + + A++ + P+IV++ +++N C RV AL ++
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
++ + P+ V Y + G + ++ ALDLL M G G D + YN+LISG G
Sbjct: 177 MVGMG-YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 241 NLDKANELFDELKER-----CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
A + + +R ++ +++A E GR EA + Y+ ++ R
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKE-----GRVSEAEEFYEEMIRRSLDPD 290
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
VT ++L+ L + + +A +F M+ P+ T++I++N K
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV-----TYSILINGYCKSKKVEHG 345
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+ F + + + + Y +I +C G L+ AE +F + + P++ T+
Sbjct: 346 MKLF----CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
L+ +I+ AL + M G+ N + + K +V D I + +
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 476 PKPDPTCYEVVIRGLCAKGL 495
PD Y ++ GL KGL
Sbjct: 462 LMPDIWTYTTMMLGLYKKGL 481
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 22/316 (6%)
Query: 54 NAIRPPLQHSPSRDPNAPRLPDSTSALVGPRLNLHNRVQS-LIRAGDLDAASSVARHSTF 112
N I L S D L +GP + +N + S L +G A+ + T
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 113 SSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD 172
P VFT NA+I A + R +EA + +S + P+IV+Y+ +I C R+D
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS-LDPDIVTYSLLIYGLCMYSRLD 308
Query: 173 VALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNL 232
A E++ +++ F P VTY L G+ + ++ + L EM +G +++ Y L
Sbjct: 309 EAEEMFGFMVSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 233 ISGFLELGNLDKANELFDELKERCLVYDGV-----VNATYMEWFFNNGRDKEAMDSYKSL 287
I G+ G L+ A E+F R +V+ GV + +NG+ ++A+ +
Sbjct: 368 IQGYCRAGKLNVAEEIF-----RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 288 MDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD--TFNIMVNE 345
VT N+++ + K G+ AW D + N Q + D T+ M+
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAW-------DIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 346 CFNLGKFHEALATFRK 361
+ G EA A FRK
Sbjct: 476 LYKKGLRREADALFRK 491
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/413 (19%), Positives = 160/413 (38%), Gaps = 84/413 (20%)
Query: 131 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 190
R + ++++ LF F Q +P+I ++ +++ + DV + L+ + +
Sbjct: 58 RFMKLDDSLDLF-FHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHN 115
Query: 191 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 250
T L F ++ AL L +M+ GH + + +L++GF
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR------------ 163
Query: 251 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 310
D V +A YM + ++ +K V N +++ L K
Sbjct: 164 --------GDRVYDALYM---------------FDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 311 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 370
+ A L ++M + P+ T+N +++ + G++ +A R + +
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVV-----TYNSLISGLCSSGRWSDAT---RMVSCMTKREI 252
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
+ DV +N +I + G +SEAE +EE+ +SL PD+ T+ LI R+D+A
Sbjct: 253 YP-DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 431 KVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
++F MV G PD Y ++I G
Sbjct: 312 EMFGFMVSKG-----------------------------------CFPDVVTYSILINGY 336
Query: 491 CAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGR---GDEIERLLDF 540
C ++ ++L ++ + GV + + + +AG+ +EI R + F
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 182/431 (42%), Gaps = 45/431 (10%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFF--FTQSNIVPNIVSYNNVINTHCDEGRVDV 173
+P + TCN ++ + R + F + + N+ ++N ++N +C EG+++
Sbjct: 163 KPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLED 222
Query: 174 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI 233
AL + +++ P VTY + K GR+ + +LL +M G + + YNNL+
Sbjct: 223 ALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLV 282
Query: 234 SGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD--RQ 291
G+ +LG+L +A ++ + +K+ ++ D + N G +E ++ LMD +
Sbjct: 283 YGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLE----LMDAMKS 338
Query: 292 FKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN----------------FQA 333
K+ P VT N L++ + G +A L +QM ++ N +A
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 334 VNSD---------------TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGY 378
V T++ ++ +G AL R+ G K M+
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG----QKGIKMNTITL 454
Query: 379 NNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD 438
N I+ C+ L EA L + D T+ TLI + + E+++ AL+++ M
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 439 AGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDK 498
+ + N + L + K ++ E PD + + +I G C +G ++K
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 499 SLELLYQVMRY 509
+ E + +++
Sbjct: 575 AFEFYNESIKH 585
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 168/426 (39%), Gaps = 78/426 (18%)
Query: 78 SALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNE 137
+ LV R+ +N V + G L A + ++ P + T N +I + A E
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328
Query: 138 AIALFHFFFTQSNIVPNIVSYNNVIN----------------------------TH---- 165
+ L + P++V+YN +I+ TH
Sbjct: 329 GLELMDAM-KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISL 387
Query: 166 ---CDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGH 222
C E + + + ++ F P VTY L K ++ G + AL+++REM KG
Sbjct: 388 KWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447
Query: 223 GADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMD 282
+++ N ++ + LD+A+ L + +R + D V T + FF + ++A++
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 283 SYKSLMDRQFKMTPV--TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD--- 337
+ + ++ K+TP T N L+ L HGK A FD++ ++ P+ NS
Sbjct: 508 MWDEM--KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565
Query: 338 ---------------------------TFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 370
T NI++N G +AL F +
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE--- 622
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYM---KMERID 427
+D YN +IS FC++ L EA L E+ K L PD T+ + I M K+ D
Sbjct: 623 --VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETD 680
Query: 428 DALKVF 433
+ LK F
Sbjct: 681 ELLKKF 686
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 174/401 (43%), Gaps = 12/401 (2%)
Query: 101 DAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNN 160
DA + R + P T N I+ AM + R ++ L ++ +VPN V+YNN
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL-LDMKKNGLVPNRVTYNN 280
Query: 161 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 220
++ +C G + A ++ + T P TY L G +AG + E L+L+ M +
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVL-PDLCTYNILINGLCNAGSMREGLELMDAMKSL 339
Query: 221 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 280
D + YN LI G ELG +A +L ++++ + + V + ++W + +
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 281 MDSYKSLMDRQ-FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
K L+D F VT + L++ LK G + A + +M +N+ T
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK-----MNTITL 454
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
N +++ K EA A + + F +D Y +I F + +A +++
Sbjct: 455 NTILDALCKERKLDEAHNLLNSA----HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWD 510
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKND 459
E+ ++P V T +LI + + A++ F + ++GL + N + K
Sbjct: 511 EMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG 570
Query: 460 KVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSL 500
+V ++ + KPD +++ GLC +G+ +K+L
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 165/393 (41%), Gaps = 56/393 (14%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFI---SAGRIVE 209
P+ ++ ++ + EG+ VAL++++ +I P+ +T L G + S+ I
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIR-LKLKPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 210 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVY-DGVVNATYM 268
A ++ +M+ G + +N L++G+ G L+ A + + + V D V T +
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 269 EWFFNNGRDKEAMDSYKSLMD-RQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
+ GR D + L+D ++ + P VT N L+ K G +A+ + + M
Sbjct: 248 KAMSKKGR---LSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
+ P+ T+NI++N N G E L S DV YN +I
Sbjct: 305 NVLPDLC-----TYNILINGLCNAGSMREGLELMDAM----KSLKLQPDVVTYNTLIDGC 355
Query: 386 CENGLLSEAETLFEE-------------------LCSKS-----------------LSPD 409
E GL EA L E+ LC + SPD
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 410 VPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILS 469
+ T+ TLI AY+K+ + AL++ M G+++ T N + D L K K+ + ++L+
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 470 KMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
+R D Y +I G + ++K+LE+
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 171/395 (43%), Gaps = 49/395 (12%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P TCN I+ + R R A +F+ + I N+ ++N +IN C EG++ A +
Sbjct: 188 PKTETCNHILTLLSRLNRIENA-WVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA-K 245
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+ I+ P+ VTY L +GF GRI A ++ EM +KG D YN ++S
Sbjct: 246 GFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW- 304
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ N +A+E+ E+KE LV D
Sbjct: 305 --MCNEGRASEVLREMKEIGLVPDS----------------------------------- 327
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
V+ N+L+ +G A+A D+M+ P F T+N +++ F K A
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFY-----TYNTLIHGLFMENKIEAAE 382
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
R+ K +D YN +I+ +C++G +A L +E+ + + P T+ +L
Sbjct: 383 ILIREI----REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438
Query: 417 IDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDP 476
I + + +A ++F ++V G++ N + D + +L +M
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI 498
Query: 477 KPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
PD Y ++RGLC +G +++ EL+ ++ R G+
Sbjct: 499 NPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 157/400 (39%), Gaps = 14/400 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L + G L A +PT+ T N ++ R E L
Sbjct: 232 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI-EGARLIISEMKSKG 290
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
P++ +YN +++ C+EGR L + I P +V+Y L +G + G + A
Sbjct: 291 FQPDMQTYNPILSWMCNEGRASEVLREMKEI----GLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
EM+ +G YN LI G ++ A L E++E+ +V D V +
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ +G K+A + +M + T T L+ VL + K +A LF++++ P+
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
+N+ +M C +G A + ++ S + D YN ++ C G
Sbjct: 467 LVMMNT----LMDGHC-AIGNMDRAFSLLKEMDMMSINP----DDVTYNCLMRGLCGEGK 517
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
EA L E+ + + PD ++ TLI Y K A V M+ G N
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 451 VFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
+ L KN + +L +M P+ + + VI +
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/502 (22%), Positives = 207/502 (41%), Gaps = 66/502 (13%)
Query: 49 IEPPLNAIRPPLQHSPSRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVAR 108
+E PL A + + +L DST L + ++S +GD D+ +
Sbjct: 51 VENPLEAPISEKMFKSAPKMGSFKLGDST---------LSSMIESYANSGDFDSVEKLLS 101
Query: 109 HSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDE 168
+ + + A +A ++A+ LFH + ++ S+N+V+N +E
Sbjct: 102 RIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINE 161
Query: 169 GRVDVALELYRHIIAT------APFG--------------------------------PS 190
G LE Y +++ + +P G P
Sbjct: 162 GLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPD 221
Query: 191 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 250
TY L G RI EA+ LL EM ++G ++YN LI G + G+L + +L D
Sbjct: 222 GYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVD 281
Query: 251 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF--KMTP--VTCNVLLEVL 306
+ + V + V T + G+ +D SL++R K P VT L+ L
Sbjct: 282 NMFLKGCVPNEVTYNTLIHGLCLKGK----LDKAVSLLERMVSSKCIPNDVTYGTLINGL 337
Query: 307 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS 366
+K + T A L M + +N ++++++ F GK EA++ +RK K
Sbjct: 338 VKQRRATDAVRLLSSMEERG-----YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 367 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERI 426
++ Y+ ++ C G +EA+ + + + P+ T+ +L+ + K
Sbjct: 393 CKP----NIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLC 448
Query: 427 DDALKVFHRMVDAGLRVVTNFCNRVF-DELIKNDKVIDCAHILSKMGERDPKPDPTCYEV 485
++A++V+ M G FC V D L +V + + SKM KPD Y
Sbjct: 449 EEAVQVWKEMDKTGCS-RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 486 VIRGLCAKGLLDKSLELLYQVM 507
+I+GLC G +D +L+L ++++
Sbjct: 508 IIKGLCGIGSMDAALKLYHEML 529
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 176/405 (43%), Gaps = 30/405 (7%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P + N +I A+ + + + AI +F + +P+ +Y +++ C E R+D A+
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGM-PERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L + + PS V Y L G G + L+ M KG + + YN LI G
Sbjct: 244 LLDEM-QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
G LDKA L + + + + V T + R +A+ S+ +R + +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
+VL+ L K GK +A +L+ +M + PN ++++V+ GK +EA
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIV-----VYSVLVDGLCREGKPNEAK 417
Query: 357 ATFRK---AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
+ +G N+ Y++++ F + GL EA +++E+ S + +
Sbjct: 418 EILNRMIASGCLPNAYT-------YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGLR--------VVTNFCNRVFDELIKNDKVIDCA 465
LID + R+ +A+ V+ +M+ G++ ++ C + D +
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCG-----IGSMDAALKLY 525
Query: 466 HILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
H + E +PD Y +++ GLC + + ++++LL ++ G
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 173/399 (43%), Gaps = 37/399 (9%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P ++ N +I + + L F + VPN V+YN +I+ C +G++D A+
Sbjct: 257 PVIY--NVLIDGLCKKGDLTRVTKLVDNMFLKG-CVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L ++++ P+ VTY L G + R +A+ LL M +G+ + +Y+ LISG
Sbjct: 314 LLERMVSSKCI-PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL 372
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ G ++A L+ ++ E+ + VV + ++ G+ EA + ++
Sbjct: 373 FKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNA 432
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
T + L++ K G +A ++ +M N ++++++ +G+ EA+
Sbjct: 433 YTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN-----KFCYSVLIDGLCGVGRVKEAM 487
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE-LCSK--SLSPDVPTH 413
+ K T D Y++II C G + A L+ E LC + PDV T+
Sbjct: 488 MVWSKMLTI----GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAG--------------LRVVTNFCN--RVFDE--- 454
L+D + I A+ + + M+D G L +N C+ R F E
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELV 603
Query: 455 --LIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLC 491
L+K +V I+ M + P + + +++R +C
Sbjct: 604 VRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREIC 642
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
++ + G + A V + + F + +I + R EA+ ++ T
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT-IG 497
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA--PFGPSAVTYRHLTKGFISAGRIV 208
I P+ V+Y+++I C G +D AL+LY ++ P VTY L G I
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDIS 557
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGN-LDKANELFDELKERCL 257
A+DLL ML++G D + N ++ E N DK +EL R L
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLL 607
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 141/348 (40%), Gaps = 45/348 (12%)
Query: 230 NNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR----DKEAMDSYK 285
+++I + G+ D +L ++ L ++ +++ F G+ DK A+D +
Sbjct: 81 SSMIESYANSGDFDSVEKLLSRIR---LENRVIIERSFIVVFRAYGKAHLPDK-AVDLFH 136
Query: 286 SLMDR-QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN 344
++D + K + + N +L V++ G + +D +++++ N N +FN+++
Sbjct: 137 RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP-NGLSFNLVIK 195
Query: 345 ECFNLGKFHEALATFRK---------------------AGTKSNSKAFAMDVAG------ 377
L A+ FR + + +D
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255
Query: 378 ----YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
YN +I C+ G L+ L + + K P+ T+ TLI ++D A+ +
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 434 HRMVDAGLRVVTNFCN--RVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLC 491
RMV + + + N + + L+K + D +LS M ER + Y V+I GL
Sbjct: 316 ERMVSS--KCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 492 AKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
+G ++++ L ++ G + + + + G+ +E + +L+
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 187/439 (42%), Gaps = 17/439 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ +++GDL AS V + P V T +I + + R EA ++ +
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL-KRG 421
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ P+IV+Y+++I+ C G + LY +I + P V Y L G G ++ A
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG-YPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD-----ELKERCLVYDGVVNA 265
+ +ML + + +V+N+LI G+ L D+A ++F +K + V+
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 266 TYME-WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
+ ME F + + + + + + CNV++ +L K + A F+ +++
Sbjct: 541 SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 600
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
P+ T+N M+ +L + EA F F + +I
Sbjct: 601 GKMEPDIV-----TYNTMICGYCSLRRLDEAERIFELLKVT----PFGPNTVTLTILIHV 651
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVV 444
C+N + A +F + K P+ T+ L+D + K I+ + K+F M + G+
Sbjct: 652 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 711
Query: 445 TNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLY 504
+ + D L K +V + +I + + PD Y ++IRG C G L ++ L
Sbjct: 712 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 771
Query: 505 QVMRYGVGVTNSLREFVTE 523
++R GV + L+ ++E
Sbjct: 772 HMLRNGVKPDDLLQRALSE 790
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 170/408 (41%), Gaps = 53/408 (12%)
Query: 142 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 201
FH + IVS N V+ + +++VA L ++ P P+ VT+ L GF
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGP-APNVVTFCTLINGF 296
Query: 202 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
G + A DL + M +G D + Y+ LI G+ + G L ++LF + + + D
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
VV ++ ++ + +G A YK ++ + VT +L++ L + G+ +A+ ++ Q
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
+L P+ T++ +++ G A + + DV Y +
Sbjct: 417 ILKRGMEPSIV-----TYSSLIDGFCKCGNLRSGFALYEDM----IKMGYPPDVVIYGVL 467
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+ + GL+ A ++ +S+ +V +LID + ++ R D+ALKVF M G+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 442 R-VVTNF----------------------------------------CNRVFDELIKNDK 460
+ V F CN V L K +
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 587
Query: 461 VIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
+ D + + + E +PD Y +I G C+ LD++ E ++++++
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA-ERIFELLK 634
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 180/450 (40%), Gaps = 72/450 (16%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
PN+V++ +IN C G +D A +L++ ++ P + Y L G+ AG +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFK-VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L + L+KG D +V+++ I +++ G+L A+ ++ + + + + V ++
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF- 331
+GR EA Y ++ R + + VT + L++ K G +AL++ M+ PP+
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 332 ---------------------------QAV--NSDTFNIMVNECFNLGKFHEALATFRKA 362
Q++ N FN +++ L +F EAL FR
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 363 GT---KSNSKAF----------------------------------AMDVAGYNNIISRF 385
G K + F + D+A N +I
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFH--RMVDAGLRV 443
+ + +A F L + PD+ T+ T+I Y + R+D+A ++F ++ G
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642
Query: 444 VTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
VT + L KN+ + + S M E+ KP+ Y ++ ++ S +L
Sbjct: 643 VT--LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700
Query: 504 YQVMRYGVGVTNSLREFVTEVFKKAGRGDE 533
++ G+ + + + K GR DE
Sbjct: 701 EEMQEKGISPSIVSYSIIIDGLCKRGRVDE 730
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 136/348 (39%), Gaps = 51/348 (14%)
Query: 166 CDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGAD 225
C G VD ALE++ + P YR MLN G+D
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYR---------------------MLNSLIGSD 195
Query: 226 SLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV-VNATYMEWFFNNGRDKEAMDSY 284
+D + FD+L + GV + ++ F G +A+D +
Sbjct: 196 ---------------RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFH 240
Query: 285 KSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN 344
+ +M+R F++ V+CN +L+ L + A L +LD PN TF ++N
Sbjct: 241 RLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVV-----TFCTLIN 294
Query: 345 ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSK 404
G+ A F+ + D+ Y+ +I + + G+L LF + K
Sbjct: 295 GFCKRGEMDRAFDLFKVM----EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 405 SLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDELIKNDKVI 462
+ DV + ID Y+K + A V+ RM+ G+ VVT + L ++ ++
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY--TILIKGLCQDGRIY 408
Query: 463 DCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
+ + ++ +R +P Y +I G C G L L +++ G
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 18/213 (8%)
Query: 305 VLLKHGKKTQAWALFDQMLDNHTPPNF--------QAVNSDTFNIMVNECFNLGKFHEAL 356
VL+++G A +FD+M+ N +F +++++D ++ C G +AL
Sbjct: 108 VLIRNGMFDVADKVFDEMITNR-GKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKAL 166
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD-VPTHRT 415
F S + +++ + + F++LC + P V H
Sbjct: 167 EIF----VYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGF 222
Query: 416 LIDAYMKMERIDDALKVFHRMV-DAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
++DA + AL FHR+V + G RV CN+V L D++ + +LS + +
Sbjct: 223 VLDALFCKGEVTKALD-FHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDC 280
Query: 475 DPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
P P+ + +I G C +G +D++ + L++VM
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFD-LFKVM 312
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 179/415 (43%), Gaps = 44/415 (10%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF--GPSAVTYRHLTKGFISAGRIVEA 210
P+++SYN++I+ HC G + A + + A+ F P V++ L GF + E
Sbjct: 89 PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV 148
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ ML K + + Y+ I F + G L A + F +K L + V ++
Sbjct: 149 FVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ G + A+ YK + + + VT L++ K G+ +A ++ +M+++ PN
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
S + +++ F G A+ K K ++ +D+ Y IIS C NG
Sbjct: 268 -----SLVYTTIIDGFFQRGDSDNAM----KFLAKMLNQGMRLDITAYGVIISGLCGNGK 318
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--------- 441
L EA + E++ L PD+ T+++AY K R+ A+ ++H++++ G
Sbjct: 319 LKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 442 ------------RVVTNFC---------NRVFDELIKNDKVIDCAHILSKMGERDPKPDP 480
+ FC + D L K I+ + SK+ E PD
Sbjct: 379 MIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDK 438
Query: 481 TCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIE 535
Y I GLC +G L + +L ++++ G+ + L + T ++ A +G +E
Sbjct: 439 FMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL--DLLAYTTLIYGLASKGLMVE 491
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 176/421 (41%), Gaps = 51/421 (12%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ + ++G+L A + P V T +I +A A++L+ +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM-RRVR 228
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ N+V+Y +I+ C +G + A E+Y ++ P+++ Y + GF G A
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED-RVEPNSLVYTTIIDGFFQRGDSDNA 287
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ L +MLN+G D Y +ISG G L +A E+ +++++ LV D V+ T M
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+F +GR K A++ Y L++R F+ V + +++ + K+
Sbjct: 348 YFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKN--------------------- 386
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
G+ HEA+ F K+N DV Y +I C+ G
Sbjct: 387 -------------------GQLHEAIVYF--CIEKAN------DVM-YTVLIDALCKEGD 418
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
E E LF ++ L PD + + I K + DA K+ RMV GL +
Sbjct: 419 FIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTT 478
Query: 451 VFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
+ L +++ + +M PD ++++IR +G + + +LL + R G
Sbjct: 479 LIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Query: 511 V 511
+
Sbjct: 539 L 539
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 166/407 (40%), Gaps = 62/407 (15%)
Query: 113 SSTRPTVFTCNAIIAAMYRAKRYNEAIALFHF--FFTQSNIVPNIVSYNNVINTHCDEGR 170
SS P FTCN I + + N I F + P+ S+N+V++ C G+
Sbjct: 15 SSNLPDPFTCNKHIHQLINS---NCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQ 71
Query: 171 VDVALELYRHIIATAP-FG--PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA--- 224
V A I+ + P FG P ++Y L G G I A L+ E L HG
Sbjct: 72 VKFA----EDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA-SLVLESLRASHGFICK 126
Query: 225 -DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDS 283
D + +N+L +GF ++ LD+ ++ + +C + V +T+++ F +G + A+ S
Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 284 YKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMV 343
+ S+ VT L++ K G A +L+ +M
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM--------------------- 224
Query: 344 NECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCS 403
R+ +++V Y +I FC+ G + AE ++ +
Sbjct: 225 ----------------RRV-------RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 404 KSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVID 463
+ P+ + T+ID + + D+A+K +M++ G+R+ + L N K+ +
Sbjct: 262 DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKE 321
Query: 464 CAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
I+ M + D PD + ++ G + ++ + ++++ G
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 124 AIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIA 183
+I A+ + + E LF +++ +VP+ Y + I C +G + A +L ++
Sbjct: 408 VLIDALCKEGDFIEVERLFSKI-SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ 466
Query: 184 TAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLD 243
+ Y L G S G +VEA + EMLN G DS V++ LI + + GN+
Sbjct: 467 EGLL-LDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMA 525
Query: 244 KANELFDELKERCLV 258
A++L +++ R LV
Sbjct: 526 AASDLLLDMQRRGLV 540
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 183/378 (48%), Gaps = 24/378 (6%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
R +T +I M R + +EA+ LF+ T+ + N+V YN ++ VD A+
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEG-LTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE---ALDLLREMLNKGHGADSLVYNNL 232
+++ ++ T P+ TY L ++ G++V +++ + + +G +Y+ L
Sbjct: 326 QVFSRMVETGC-RPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG------IYSYL 378
Query: 233 ISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 292
+ +LG++ +A+ LF ++ + + + +E G+ EA++ + ++
Sbjct: 379 VRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGV 438
Query: 293 KMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKF 352
+ N + L K + + LF++M + P+ T+NI++ +G+
Sbjct: 439 VTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF-----TYNILIASFGRVGEV 493
Query: 353 HEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 412
EA+ F + +S+ K D+ YN++I+ +NG + EA F+E+ K L+PDV T
Sbjct: 494 DEAINIFEEL-ERSDCKP---DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVT 549
Query: 413 HRTLIDAYMKMERIDDALKVFHRMVDAGLR--VVTNFCNRVFDELIKNDKVIDCAHILSK 470
+ TL++ + K ER++ A +F M+ G + +VT N + D L KN + + + SK
Sbjct: 550 YSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTY--NILLDCLEKNGRTAEAVDLYSK 607
Query: 471 MGERDPKPDPTCYEVVIR 488
M ++ PD Y V+ R
Sbjct: 608 MKQQGLTPDSITYTVLER 625
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 172/392 (43%), Gaps = 23/392 (5%)
Query: 120 FTCNAIIAAMYRAK---RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
F N II + R+ R++ ++ +SN+ NI + N +I + + + L
Sbjct: 134 FLYNRIILILSRSNLPDRFDRVRSILDSM-VKSNVHGNISTVNILIGFFGNTEDLQMCLR 192
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L + ++ TY+ L + ++ + +A D+ E+ GH D YN L+
Sbjct: 193 L----VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA- 247
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
L +KA ++F+++K+R D + G+ EA+ + ++ +
Sbjct: 248 --LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNV 305
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
V N L++VL K +A +F +M++ P N T+++++N G+
Sbjct: 306 VGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRP-----NEYTYSLLLNLLVAEGQL---- 356
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
R G SK + M Y+ ++ + G +SEA LF ++ S + + ++ ++
Sbjct: 357 --VRLDGVVEISKRY-MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSM 413
Query: 417 IDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDP 476
+++ + +A+++ ++ + G+ T N VF L K ++ + KM + P
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP 473
Query: 477 KPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
PD Y ++I G +D+++ + ++ R
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELER 505
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 179/387 (46%), Gaps = 15/387 (3%)
Query: 155 IVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLL 214
I YN ++N+ G VD ++Y ++ P+ TY + G+ G + EA +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLED-KVCPNIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 215 REMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNN 274
+++ G D Y +LI G+ + +LD A ++F+E+ + + V +
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 275 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 334
R EAMD + + D + T T VL++ L +K++A L +M + PN
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH-- 359
Query: 335 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
T+ ++++ + KF +A R+ + K +V YN +I+ +C+ G++ +A
Sbjct: 360 ---TYTVLIDSLCSQCKFEKA----RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVF 452
+ E + S+ LSP+ T+ LI Y K + A+ V ++M++ + VVT N +
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTY--NSLI 469
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG 512
D ++ +LS M +R PD Y +I LC ++++ +L + + GV
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 513 VTNSLREFVTEVFKKAGRGDEIERLLD 539
+ + + + KAG+ DE +L+
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLE 556
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 193/477 (40%), Gaps = 42/477 (8%)
Query: 91 VQSLIRAGD----LDAASSVARHSTFSSTRPTVFTC-NAIIAAMYRAKRYNEAIALFHFF 145
++S GD LD + + F + C N ++ ++ R +E ++
Sbjct: 150 IKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEM 209
Query: 146 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 205
+ + PNI +YN ++N +C G V+ A + Y I A P TY L G+
Sbjct: 210 L-EDKVCPNIYTYNKMVNGYCKLGNVEEANQ-YVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 206 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 265
+ A + EM KG + + Y +LI G +D+A +LF ++K+
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
++ + R EA++ K + + K T VL++ L K +A L QML+
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR------------------KAGTKSN 367
PN T+N ++N G +A+ K KSN
Sbjct: 388 GLMPNVI-----TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 368 S-KAFAM-----------DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
KA + DV YN++I C +G A L + + L PD T+ +
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
+ID+ K +R+++A +F + G+ + D K KV + +L KM ++
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGD 532
P+ + +I GLCA G L ++ L ++++ G+ T S + K G D
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 179/446 (40%), Gaps = 74/446 (16%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ + G ++ A V P T N +I Y ++A+ + + +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKML-ERK 457
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
++P++V+YN++I+ C G D A L ++ P TY + + R+ EA
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE-LKERCLVYDGVVNATYME 269
DL + KG + ++Y LI G+ + G +D+A+ + ++ L + CL NA +
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL-IH 575
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
+G+ KEA + ++ + T T +L+ LLK G A++ F QML + T P
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
D Y I +C G
Sbjct: 636 --------------------------------------------DAHTYTTFIQTYCREG 651
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG--------L 441
L +AE + ++ +SPD+ T+ +LI Y + + + A V RM D G L
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFL 711
Query: 442 RVVTNFCNRVFDE-------------LIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIR 488
++ + + + +++ D V++ +L KM E P+ YE +I
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVE---LLEKMVEHSVTPNAKSYEKLIL 768
Query: 489 GLCAKGLLDKSLELLYQVMRYGVGVT 514
G+C G L + E ++ M+ G++
Sbjct: 769 GICEVGNL-RVAEKVFDHMQRNEGIS 793
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 341 IMVNECFNLGKFHEALATFRKAGTKSNSK-AFAMDVAGYNNIISRFCENGLLSEAETLFE 399
+M+ C ++G L RK + + + + YN +++ GL+ E + ++
Sbjct: 148 LMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--------RVVTNFCNRV 451
E+ + P++ T+ +++ Y K+ +++A + ++V+AGL ++ +C R
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQR- 266
Query: 452 FDELIKNDKVIDCA-HILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
K +D A + ++M + + + Y +I GLC +D++++L ++
Sbjct: 267 --------KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 183/396 (46%), Gaps = 18/396 (4%)
Query: 115 TRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVA 174
+ +V + N ++ + + +R++ A+F I PNI + N ++ C + ++ A
Sbjct: 151 VKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESA 210
Query: 175 LELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLIS 234
++ I + P+ VTY + G+++ G + A +L EML++G D+ Y L+
Sbjct: 211 YKVLDEI-PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 235 GFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 294
G+ +LG +A + D++++ + + V + + EA + + +++R F
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 295 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 354
C +++ L + K +A L+ +ML N+ P+ A+ S + + E G+ E
Sbjct: 330 DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD-NALLSTLIHWLCKE----GRVTE 384
Query: 355 ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
A F + K + YN +I+ CE G L+EA L++++ + P+ T+
Sbjct: 385 ARKLFDEF-----EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYN 439
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
LI+ K + + ++V M++ G +F+ L K K D I+S M
Sbjct: 440 VLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS-MAVM 498
Query: 475 DPKPDPTCYEVVIRGLCAKGLLDKSL----ELLYQV 506
+ K D +E+ ++ G LDK + ELL+++
Sbjct: 499 NGKVDKESWELFLKKFA--GELDKGVLPLKELLHEI 532
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 167/407 (41%), Gaps = 46/407 (11%)
Query: 132 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 191
A RY ++ +F + ++ S N ++N R D+ ++++ + P+
Sbjct: 133 AGRYESSMRIF-LRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNI 191
Query: 192 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 251
T L K I A +L E+ + G + + Y ++ G++ G+++ A + +E
Sbjct: 192 FTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 252 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 311
+ +R D M+ + GR EA + + + VT V++ L K K
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 312 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 371
+A +FD+ML+ P+ ++ + + + K EA +RK K+N
Sbjct: 312 SGEARNMFDEMLERSFMPD-SSLCCKVIDALCED----HKVDEACGLWRKM-LKNNCMP- 364
Query: 372 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALK 431
D A + +I C+ G ++EA LF+E S+ P + T+ TLI + + +A
Sbjct: 365 --DNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEA-- 419
Query: 432 VFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLC 491
R++D+ M ER KP+ Y V+I GL
Sbjct: 420 -----------------GRLWDD----------------MYERKCKPNAFTYNVLIEGLS 446
Query: 492 AKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLL 538
G + + + +L +++ G + + E +K G+ ++ +++
Sbjct: 447 KNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 8/265 (3%)
Query: 275 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 334
GR + +M + + D K + + N LL VL+++ Q + L M N
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN----QRFDLVHAMFKNSKESFGITP 189
Query: 335 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
N T N++V L K ++ + + K + S ++ Y I+ + G + A
Sbjct: 190 NIFTCNLLVKA---LCKKNDIESAY-KVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDE 454
+ + EE+ + PD T+ L+D Y K+ R +A V M + +
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 455 LIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVT 514
L K K + ++ +M ER PD + VI LC +D++ L ++++
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 515 NSLREFVTEVFKKAGRGDEIERLLD 539
N+L + K GR E +L D
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFD 390
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 217/512 (42%), Gaps = 85/512 (16%)
Query: 86 NLHNRVQSL---IRAGDLDA----ASSVARHSTFSSTRPTVFTCNAIIAAMY-RAKRYNE 137
NL + QSL + +G + + +SS+ + T S T T F +I Y +++ N
Sbjct: 53 NLFSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNL 112
Query: 138 AIALFHFFFTQSNIVPNIVSYNNVIN------------THCDEGRVDVALELYRHIIATA 185
+I+ F+ + VP +N ++ + +E + V L++Y
Sbjct: 113 SISYFNEM-VDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVY------- 164
Query: 186 PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 245
FG L KG AG I ++ DLL E+ G + ++Y LI G + G ++KA
Sbjct: 165 SFGI-------LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 246 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 305
+LF E+ + LV + + F NG K+ + Y+ + + T N ++
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 306 LLKHGKKTQAWALFDQMLDNHTPPNFQAVN-----------------------SD----- 337
L K G+ A+ +FD+M + N N SD
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 338 --TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
T+N +++ +GK +AL+ R S+ + + YN ++S FC G S A
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDL----KSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--------RVVTNF 447
+ +E+ + + P T+ LID + + + ++ A+++ M + GL ++ F
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 448 CNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
C + ++ + + + M E++ +P+ Y +I G C +G ++L+LL ++
Sbjct: 454 CIK--------GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 508 RYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
+ + ++ EV K + E ERL++
Sbjct: 506 EKELAPNVASYRYMIEVLCKERKSKEAERLVE 537
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 10/294 (3%)
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
+ + PN+ +YN V+N C +GR A +++ + + VTY L G ++
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKL 319
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
EA ++ +M + G + + YN LI GF +G L KA L +LK R L V
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
+ F G A K + +R K + VT +L++ + +A L M +
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
P+ T++++++ G+ +EA F+ K+ + YN +I +C+
Sbjct: 440 VPDVH-----TYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVI----YNTMILGYCK 490
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
G A L +E+ K L+P+V ++R +I+ K + +A ++ +M+D+G+
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 162/402 (40%), Gaps = 17/402 (4%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
++ AG+++ + + T P V +I + +A LF F +
Sbjct: 170 IKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF-FEMGKLG 228
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+V N +Y +IN G E+Y + F P+ TY + GR +A
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF-PNLYTYNCVMNQLCKDGRTKDA 287
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ EM +G + + YN LI G L++AN++ D++K + + + T ++
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F G+ +A+ + L R + VT N+L+ + G + A + +M + P+
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 331 FQAVNSDTFNIMVN---ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
T+ I+++ N+ K + + + G DV Y+ +I FC
Sbjct: 408 -----KVTYTILIDTFARSDNMEKAIQLRLSMEELG-------LVPDVHTYSVLIHGFCI 455
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNF 447
G ++EA LF+ + K+ P+ + T+I Y K ALK+ M + L
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 448 CNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRG 489
+ + L K K + ++ KM + P + ++ R
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 158/355 (44%), Gaps = 34/355 (9%)
Query: 81 VGPRLNLHNRVQSLI-RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMY-RAKRYNEA 138
+ RL+LH V SLI R L S P F AI+A Y A + ++A
Sbjct: 100 IAARLHLHPTVWSLIHRMRSLRIGPS-----------PKTF---AIVAERYASAGKPDKA 145
Query: 139 IALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLT 198
+ LF + ++ S+N +++ C RV+ A EL+R + F VTY +
Sbjct: 146 VKLF-LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL--RGRFSVDTVTYNVIL 202
Query: 199 KGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV 258
G+ R +AL++L+EM+ +G + YN ++ GF G + A E F E+K+R
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 259 YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWAL 318
D V T + F G K A + + ++ + T N +++VL K A +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 319 FDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKF---HEALATFRKAGTKSNSKAFAMDV 375
F++M+ PN T+N+++ F+ G+F E + G + N +
Sbjct: 323 FEEMVRRGYEPNVT-----TYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT----- 372
Query: 376 AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
YN +I + E + +A LFE++ S P++ T+ LI +R +D +
Sbjct: 373 --YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMV 425
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 23/255 (9%)
Query: 300 NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF 359
N +L+VL K + +A+ LF + + V++ T+N+++N + + +AL
Sbjct: 165 NTILDVLCKSKRVEKAYELFRALRGRFS------VDTVTYNVILNGWCLIKRTPKALEVL 218
Query: 360 RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDA 419
++ + ++ YN ++ F G + A F E+ + DV T+ T++
Sbjct: 219 KEMV----ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHG 274
Query: 420 YMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPD 479
+ I A VF M+ G+ N + L K D V + + +M R +P+
Sbjct: 275 FGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPN 334
Query: 480 PTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV----GVTNSLREFVTE---------VFK 526
T Y V+IRGL G + EL+ ++ G N + + +E +F+
Sbjct: 335 VTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFE 394
Query: 527 KAGRGDEIERLLDFN 541
K G GD + L +N
Sbjct: 395 KMGSGDCLPNLDTYN 409
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 163/384 (42%), Gaps = 46/384 (11%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P++ + ++ A+ + +Y I+LF I ++ S+ +I+ C R+ +AL
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHL-EMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
++ F PS VT+ L GF R EA+ L+ +++ G+ + ++YN +I
Sbjct: 136 CLGKMMKLG-FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL 194
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
E G ++ A ++ +K+ + D V + + F++G + +M
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
+T + L++V K G+ +A +++M+ PN
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN-------------------------- 288
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
+ YN++I+ C +GLL EA+ + L SK P+ T+ TL
Sbjct: 289 ------------------IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Query: 417 IDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDP 476
I+ Y K +R+DD +K+ M G+ T N ++ + K +L +M
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Query: 477 KPDPTCYEVVIRGLCAKGLLDKSL 500
PD + +++ GLC G + K+L
Sbjct: 391 HPDMYTFNILLDGLCDHGKIGKAL 414
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 158/356 (44%), Gaps = 49/356 (13%)
Query: 83 PRLNLHNRV-QSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIAL 141
P + ++N + SL G ++ A V +H RP V T N++I ++ + + + +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 142 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 201
+ I P++++++ +I+ + EG++ A + Y +I + P+ VTY L G
Sbjct: 242 LSDMM-RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV-NPNIVTYNSLINGL 299
Query: 202 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV-YD 260
G + EA +L +++KG +++ YN LI+G+ KA + D +K C++ D
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC------KAKRVDDGMKILCVMSRD 353
Query: 261 GVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD 320
GV T+ T N L + + GK + A +
Sbjct: 354 GVDGDTF------------------------------TYNTLYQGYCQAGKFSAAEKVLG 383
Query: 321 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN 380
+M+ P+ TFNI+++ + GK +AL KS + + + YN
Sbjct: 384 RMVSCGVHPDMY-----TFNILLDGLCDHGKIGKALVRLEDL-QKSKT---VVGIITYNI 434
Query: 381 IISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
II C+ + +A LF L K +SPDV T+ T++ + +A +++ +M
Sbjct: 435 IIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 149/380 (39%), Gaps = 50/380 (13%)
Query: 134 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 193
++N+A+ LF +S+ +P+IV ++ ++ + + + L+RH+ +
Sbjct: 59 KFNDALTLF-CDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHL-EMLGISHDLYS 116
Query: 194 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
+ L F R+ AL L +M+ G + + +L++GF + +A L D++
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 254 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 313
+ V+ T ++ G+ A+D K + + VT N L+ L G
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 314 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 373
+ + M+ P
Sbjct: 237 VSARILSDMMRMGISP-------------------------------------------- 252
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
DV ++ +I + + G L EA+ + E+ +S++P++ T+ +LI+ +D+A KV
Sbjct: 253 DVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL 312
Query: 434 HRMVDAGL--RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLC 491
+ +V G VT N + + K +V D IL M D Y + +G C
Sbjct: 313 NVLVSKGFFPNAVTY--NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370
Query: 492 AKGLLDKSLELLYQVMRYGV 511
G + ++L +++ GV
Sbjct: 371 QAGKFSAAEKVLGRMVSCGV 390
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 151/351 (43%), Gaps = 21/351 (5%)
Query: 194 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLV-YNNLISGFLELGNLDKANELFDEL 252
YR + + + + +AL L +M + H S+V ++ L+ +L + LF L
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDM-AESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHL 105
Query: 253 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 312
+ + +D T ++ F R A+ +M F+ + VT L+ +
Sbjct: 106 EMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRF 165
Query: 313 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSK 369
+A +L DQ++ PN +N +++ G+ + AL + K G +
Sbjct: 166 YEAMSLVDQIVGLGYEPNVV-----IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRP--- 217
Query: 370 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDA 429
DV YN++I+R +G + + ++ +SPDV T LID Y K ++ +A
Sbjct: 218 ----DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 430 LKVFHRMVDAGL--RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVI 487
K ++ M+ + +VT N + + L + + + +L+ + + P+ Y +I
Sbjct: 274 KKQYNEMIQRSVNPNIVTY--NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 488 RGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLL 538
G C +D +++L + R GV + + + +AG+ E++L
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL 382
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 197/490 (40%), Gaps = 60/490 (12%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V L A D+D V+ TV NA+I + + E + ++ ++
Sbjct: 159 VDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKM-KENG 217
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P + +YN ++N VD A ++ ++ + P VTY + KG+ AG+ +A
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL-----VYDGVVNA 265
++ LR+M +GH AD + Y +I + L+ E+ E+ + + V+
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
E G+ E +++++ + K VL++ K G A L +M+D
Sbjct: 337 LCKE-----GKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
P+ T++++VN G+ EAL F A++ Y+++I
Sbjct: 392 GFKPDVV-----TYSVVVNGLCKNGRVEEALDYFHTC----RFDGLAINSMFYSSLIDGL 442
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDA---------------- 429
+ G + EAE LFEE+ K + D + LIDA+ K ++D+A
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT 502
Query: 430 --------------------LKVFHRMVDAGLRVVTNFCNRVFDE-LIKNDKVIDCAHIL 468
LK++ M+D G+ T C R L + KV IL
Sbjct: 503 VYTYTILLSGMFKEHRNEEALKLWDMMIDKGI-TPTAACFRALSTGLCLSGKVARACKIL 561
Query: 469 SKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKA 528
++ D C E +I LC G + ++ +L + G V +R + +K
Sbjct: 562 DELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKV 620
Query: 529 GRGDEIERLL 538
G+ D +L+
Sbjct: 621 GKADLAMKLM 630
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 133/346 (38%), Gaps = 85/346 (24%)
Query: 197 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 256
L K F G + E L + R+M G YN L++G + +D A +F+ ++
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 257 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAW 316
+ D V T ++ + G+ ++AM+ + + R + +T
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKIT------------------ 294
Query: 317 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS---KAFAM 373
+ M+ C+ F +A +++ K AF++
Sbjct: 295 ----------------------YMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
+ G C+ G L+E T+FE + K P+V + LID Y K ++DA+++
Sbjct: 333 VIGG-------LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 434 HRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAK 493
HRM+D G KPD Y VV+ GLC
Sbjct: 386 HRMIDEGF-----------------------------------KPDVVTYSVVVNGLCKN 410
Query: 494 GLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
G ++++L+ + G+ + + + + KAGR DE ERL +
Sbjct: 411 GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 160/369 (43%), Gaps = 34/369 (9%)
Query: 149 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 208
+ I P +YN I CD GR+D A EL + A P V+Y L G+I G+ V
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA-----PDVVSYNTLMHGYIKMGKFV 391
Query: 209 EALDLLREMLNKGHGADSLV-YNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
EA LL + L G S+V YN LI G E GNL+ A L +E+ + + D + T
Sbjct: 392 EA-SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML--DN 325
++ F NG A + Y ++ + K L+ G +A+ L ++M+ D+
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 510
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
H P + +N+ ++ +G +A+ RK D Y +I +
Sbjct: 511 HAP------DLTIYNVRIDGLCKVGNLVKAIEFQRKIF----RVGLVPDHVTYTTVIRGY 560
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--V 443
ENG A L++E+ K L P V T+ LI + K R++ A + M G+R V
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 620
Query: 444 VTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLC-----------A 492
+T+ N + + K + + L KM E P+ Y ++I C
Sbjct: 621 MTH--NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLY 678
Query: 493 KGLLDKSLE 501
K +LDK +E
Sbjct: 679 KEMLDKEIE 687
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 143/347 (41%), Gaps = 47/347 (13%)
Query: 107 ARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHC 166
AR S P V + N ++ + ++ EA LF +I P+IV+YN +I+ C
Sbjct: 362 ARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL-RAGDIHPSIVTYNTLIDGLC 420
Query: 167 DEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG----- 221
+ G ++ A L + F P +TY L KGF+ G + A ++ EML KG
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIF-PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 222 -------------------------------HGADSLVYNNLISGFLELGNLDKANELFD 250
H D +YN I G ++GNL KA E
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539
Query: 251 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 310
++ LV D V T + + NG+ K A + Y ++ ++ + +T VL+ K G
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599
Query: 311 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 370
+ QA+ +M PN N+ + + + N+ + + L + G N +
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC--KAGNIDEAYRYLCKMEEEGIPPNKYS 657
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
+ M +IS+ C+ E L++E+ K + PD THR L
Sbjct: 658 YTM-------LISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 160/362 (44%), Gaps = 53/362 (14%)
Query: 195 RHLTKGFISAGRIVE-ALDLLRE--MLNKG---------HGA--DSLVYNNLISGFLELG 240
+ + KGF+ + R L +LR+ M+NK HG + +N ++ + G
Sbjct: 193 KMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 252
Query: 241 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 300
+L++ ++++ E+K R + + V + F NG+ +EA + + F +TP + N
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 312
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN------------------------- 335
L+E K G AW + D+ML+ P N
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP 372
Query: 336 -SDTFNIMVNECFNLGKFHEALATFR--KAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
++N +++ +GKF EA F +AG S + YN +I CE+G L
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS------IVTYNTLIDGLCESGNLE 426
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-VVTNFCNRV 451
A+ L EE+ ++ + PDV T+ TL+ ++K + A +V+ M+ G++ + R
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 452 FDELIKNDKVIDCAHIL-SKMGERDP-KPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRY 509
EL D D A L +M D PD T Y V I GLC G L K++E ++ R
Sbjct: 487 VGELRLGDS--DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 510 GV 511
G+
Sbjct: 545 GL 546
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 186/462 (40%), Gaps = 41/462 (8%)
Query: 81 VGPRLNLHNRVQSLIRAGDLDAASSV-ARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAI 139
+ P L + N + ++ D+D A R S V+T ++ + R +
Sbjct: 143 IKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGF 202
Query: 140 ALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYR----------HIIATA---- 185
L T S + PN V YN +++ C G+V A L +I+ +A
Sbjct: 203 KLLQIMKT-SGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNE 261
Query: 186 ----------------PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVY 229
F P VT + + + GR+ EAL++L + +KG D +
Sbjct: 262 QKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVAC 321
Query: 230 NNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 289
N L+ G+ LG + A F E++ + + + + + + G A+D++ +
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 290 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 349
+ T N L+ L G+ + + M D+ T D +N ++ +
Sbjct: 382 DAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDT---VHGARIDPYNCVIYGFYKE 438
Query: 350 GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 409
++ +AL K K F V +IS CE G + + +T ++++ + P
Sbjct: 439 NRWEDALEFLLKM-----EKLFPRAVDRSFKLIS-LCEKGGMDDLKTAYDQMIGEGGVPS 492
Query: 410 VPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILS 469
+ LI Y + +I+++L++ + MV G ++ N V K DKV++ +
Sbjct: 493 IIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVE 552
Query: 470 KMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
M ER PD Y ++ LC KG + K+ L +++ +
Sbjct: 553 DMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 165/379 (43%), Gaps = 25/379 (6%)
Query: 124 AIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY-RHII 182
II RA+ I++ ++ I P++ +N++++ E +D+A E + R ++
Sbjct: 117 TIIRGFGRARLIKRVISVVDLV-SKFGIKPSLKVFNSILDVLVKED-IDIAREFFTRKMM 174
Query: 183 ATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNL 242
A+ G TY L KG RI + LL+ M G +++VYN L+ + G +
Sbjct: 175 ASGIHG-DVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKV 233
Query: 243 DKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVL 302
+A L E+KE V ++ + Y N + ++M + F VT +
Sbjct: 234 GRARSLMSEMKEPNDVTFNILISAYC----NEQKLIQSMVLLEKCFSLGFVPDVVTVTKV 289
Query: 303 LEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKA 362
+EVL G+ ++A + +++ + A N+ +V LGK A F
Sbjct: 290 MEVLCNEGRVSEALEVLERVESKGGKVDVVACNT-----LVKGYCALGKMRVAQRFF--- 341
Query: 363 GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMK 422
+ K + +V YN +I+ +C+ G+L A F ++ + ++ + T TLI
Sbjct: 342 -IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 423 MERIDDALKVFHRMVDA----GLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKP 478
R DD LK+ M D+ G R+ C V K ++ D L KM + P+
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARIDPYNC--VIYGFYKENRWEDALEFLLKMEKLFPRA 458
Query: 479 DPTCYEVVIRGLCAKGLLD 497
++++ LC KG +D
Sbjct: 459 VDRSFKLI--SLCEKGGMD 475
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 135/364 (37%), Gaps = 63/364 (17%)
Query: 107 ARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHC 166
AR P T N +I+A ++ +++ L F+ VP++V+ V+ C
Sbjct: 236 ARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSL-GFVPDVVTVTKVMEVLC 294
Query: 167 DEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADS 226
+EGRV ALE+ + + V L KG+ + G++ A EM KG+ +
Sbjct: 295 NEGRVSEALEVLERVESKGG-KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNV 353
Query: 227 LVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKS 286
YN LI+G+ ++G LD A + F+++K + ++ T + GR + + +
Sbjct: 354 ETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEM 413
Query: 287 LMDRQF----KMTPVTCNVL-----------LEVLLK--------------------HGK 311
+ D ++ P C + LE LLK G
Sbjct: 414 MQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGG 473
Query: 312 KTQAWALFDQMLDNHTPPNFQAVNS---------------DTFNIMVNECF--NLGKFHE 354
+DQM+ P+ + + N MV + F+
Sbjct: 474 MDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNA 533
Query: 355 ALATFRKAGTKSNSKAFAMDVA---------GYNNIISRFCENGLLSEAETLFEELCSKS 405
+ F K N F D+A YN ++ C G + +A LF + KS
Sbjct: 534 VIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKS 593
Query: 406 LSPD 409
+ PD
Sbjct: 594 IVPD 597
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 158/425 (37%), Gaps = 62/425 (14%)
Query: 125 IIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT 184
I+ + K + A+ F + T + + +Y + + C R D +L + +
Sbjct: 46 IVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDS 105
Query: 185 APFGPSAVTYRHLTKGFISA---GRIVEALDLL--------------------------- 214
P + + +GF A R++ +DL+
Sbjct: 106 IGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIA 165
Query: 215 -----REMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 269
R+M+ G D Y L+ G + +L +K + + VV T +
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
NG+ A +SLM + VT N+L+ K Q+ L ++ P
Sbjct: 226 ALCKNGKVGRA----RSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVP 281
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
+ V + ++ NE G+ EAL + SK +DV N ++ +C G
Sbjct: 282 DVVTV-TKVMEVLCNE----GRVSEALEVLERV----ESKGGKVDVVACNTLVKGYCALG 332
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCN 449
+ A+ F E+ K P+V T+ LI Y + +D AL F+ M +R NF
Sbjct: 333 KMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIR--WNFAT 390
Query: 450 RVFDELIK----NDKVIDCAHILSKMGERD----PKPDPTCYEVVIRGLCAKGLLDKSLE 501
F+ LI+ + D IL M + D + DP Y VI G + + +LE
Sbjct: 391 --FNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP--YNCVIYGFYKENRWEDALE 446
Query: 502 LLYQV 506
L ++
Sbjct: 447 FLLKM 451
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 166/361 (45%), Gaps = 9/361 (2%)
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ P++ + + V+N +C G VD A+ + ++ + VTY L G+ G +
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 280
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+LR M +G + + Y +LI G+ + G +++A +F+ LKE+ LV D + M+
Sbjct: 281 TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDG 340
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ G+ ++A+ + ++++ + CN L+ K G+ +A +F +M D P+
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
T+N +V+ G EAL K + K V YN ++ + G
Sbjct: 401 HH-----TYNTLVDGYCRAGYVDEAL----KLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
+ +L++ + + ++ D + TL++A K+ ++A+K++ ++ GL T N
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 511
Query: 451 VFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
+ L K +KV + IL + KP Y+ + G G L ++ + + R G
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 511 V 511
+
Sbjct: 572 I 572
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/482 (20%), Positives = 197/482 (40%), Gaps = 41/482 (8%)
Query: 95 IRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPN 154
+R G+ A V P VFTC+ ++ A R+ ++A+ + + N
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 155 IVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLL 214
+V+YN++IN + G V+ + R +++ + VTY L KG+ G + EA +
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLR-LMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 215 REMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNN 274
+ K AD +Y L+ G+ G + A + D + E + + + + + + +
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 275 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 334
G+ EA + + D K T N L++ + G +A L DQM P
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM-- 437
Query: 335 NSDTFNIMVNECFNLGKFHEALATFR---KAGTKSN------------------------ 367
T+NI++ +G FH+ L+ ++ K G ++
Sbjct: 438 ---TYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 368 ----SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKM 423
++ D N +IS C+ ++EA+ + + + P V T++ L Y K+
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 424 ERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCY 483
+ +A V M G+ N + K + A ++ ++ R P Y
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 484 EVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDE----IERLLD 539
+I G C G++DK+ ++++ G+ + ++ + + + DE +++++D
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Query: 540 FN 541
F+
Sbjct: 675 FD 676
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 160/387 (41%), Gaps = 48/387 (12%)
Query: 159 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 218
N++IN +C G++ A +++ + P TY L G+ AG + EAL L +M
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMC 428
Query: 219 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 278
K + YN L+ G+ +G L+ + +R + D + +T +E F G
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 488
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 338
EAM +++++ R +T NV++ L K K +A + D + P Q T
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQ-----T 543
Query: 339 FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 398
+ + + + +G EA A K M YN +IS + L++ L
Sbjct: 544 YQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEM----YNTLISGAFKYRHLNKVADLV 599
Query: 399 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKN 458
EL ++ L+P V T+ LI + + ID A M++ G+ + N C+++ + L +
Sbjct: 600 IELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRL 659
Query: 459 DKVIDCAHILSKMGERD----------------------------------PK----PDP 480
DK+ + +L K+ + D PK P+
Sbjct: 660 DKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNN 719
Query: 481 TCYEVVIRGLCAKGLLDKSLELLYQVM 507
Y V I GLC G L+ + +L ++
Sbjct: 720 IVYNVAIAGLCKAGKLEDARKLFSDLL 746
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 162/388 (41%), Gaps = 38/388 (9%)
Query: 120 FTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYR 179
+C+ ++ A+++ +NEA+ L+ + ++ + ++ N +I+ C +V+ A E+
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARG-LLTDTITLNVMISGLCKMEKVNEAKEILD 530
Query: 180 HIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLEL 239
++ P+ TY+ L+ G+ G + EA + M KG +YN LISG +
Sbjct: 531 NV-NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKY 589
Query: 240 GNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTC 299
+L+K +L EL+ R L + + N G +A + ++++ + C
Sbjct: 590 RHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNIC 649
Query: 300 NVLLEVLLKHGKKTQAWALFDQMLD---------------------------------NH 326
+ + L + K +A L +++D N
Sbjct: 650 SKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENS 709
Query: 327 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 386
TP N+ +N+ + GK +A F +S F D Y +I
Sbjct: 710 TPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL---LSSDRFIPDEYTYTILIHGCA 766
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTN 446
G +++A TL +E+ K + P++ T+ LI K+ +D A ++ H++ G+
Sbjct: 767 IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAI 826
Query: 447 FCNRVFDELIKNDKVIDCAHILSKMGER 474
N + D L+K+ V + + KM E+
Sbjct: 827 TYNTLIDGLVKSGNVAEAMRLKEKMIEK 854
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 160/355 (45%), Gaps = 19/355 (5%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFF--FTQ 148
++ +R G + + + R P+V+TCNAI+ ++ ++ E ++++ F +
Sbjct: 170 IRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS---GEDVSVWSFLKEMLK 226
Query: 149 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 208
I P++ ++N +IN C EG + + L + + + + P+ VTY + + GR
Sbjct: 227 RKICPDVATFNILINVLCAEGSFEKSSYLMQKM-EKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 268
A++LL M +KG AD YN LI + K L ++++R + + V T +
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNH 326
F N G+ A ++ F ++P VT N L++ + G +A +F M
Sbjct: 346 NGFSNEGKVLIASQLLNEML--SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 327 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 386
P + ++ ++++ +F A + + K N + Y +I C
Sbjct: 404 LTP-----SEVSYGVLLDGLCKNAEFDLARGFYMR--MKRN--GVCVGRITYTGMIDGLC 454
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+NG L EA L E+ + PD+ T+ LI+ + K+ R A ++ R+ GL
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 147/357 (41%), Gaps = 16/357 (4%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
Y+ +I + EG + +LE++R ++ F PS T + + +G V L+EM
Sbjct: 166 YDILIRVYLREGMIQDSLEIFR-LMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
L + D +N LI+ G+ +K++ L ++++ V T + W+ GR
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
K A++ + + T N+L+ L + + + + L M PN
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN-----EV 339
Query: 338 TFNIMVNECFNLGKF---HEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
T+N ++N N GK + L G N F N +I G EA
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF-------NALIDGHISEGNFKEA 392
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDE 454
+F + +K L+P ++ L+D K D A + RM G+ V + D
Sbjct: 393 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 455 LIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
L KN + + +L++M + PD Y +I G C G + E++ ++ R G+
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 150/378 (39%), Gaps = 46/378 (12%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P T NA+I + EA+ +F + + P+ VSY +++ C D+A
Sbjct: 371 PNHVTFNALIDGHISEGNFKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 429
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
Y + +TY + G G + EA+ LL EM G D + Y+ LI+GF
Sbjct: 430 FYMRM-KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
++G A E+ + L +G++ +T + G KEA+ Y++++
Sbjct: 489 CKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDH 548
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
T NVL+ L K GK +A M + P N+ +F+ ++N N G+ +A
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP-----NTVSFDCLINGYGNSGEGLKAF 603
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
+ F + + F Y +++ C+ G L EAE + L + + D + TL
Sbjct: 604 SVFDEMTKVGHHPTFFT----YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659
Query: 417 IDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDP 476
+ A K + A+ +F MV +R
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMV-----------------------------------QRSI 684
Query: 477 KPDPTCYEVVIRGLCAKG 494
PD Y +I GLC KG
Sbjct: 685 LPDSYTYTSLISGLCRKG 702
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 190/484 (39%), Gaps = 43/484 (8%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ + R G L A + FT N ++ ++ +A + EA F T
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA-EEFMRCMTSDG 578
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I+PN VS++ +IN + + G A ++ + P+ TY L KG G + EA
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH-PTFFTYGSLLKGLCKGGHLREA 637
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L+ + D+++YN L++ + GNL KA LF E+ +R ++ D + +
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKM-TPVTCNVLLEVLLKHGKKTQAWALFDQMLDN--HT 327
G+ A+ K R + V ++ + K G+ +A F + +DN HT
Sbjct: 698 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ-WKAGIYFREQMDNLGHT 756
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS---NSKAFAMDVAGYN----- 379
P + T N M++ +GK + + G ++ N + + + GY+
Sbjct: 757 P------DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 810
Query: 380 -----------------------NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
+++ CE+ +L + + + + D T L
Sbjct: 811 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 870
Query: 417 IDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDP 476
I I+ A + M G+ + + C+ + L +N + + +L +M ++
Sbjct: 871 ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 930
Query: 477 KPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIER 536
P+ Y +I GLC G + + + +++ + + N + K G+ DE
Sbjct: 931 SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 990
Query: 537 LLDF 540
LL F
Sbjct: 991 LLRF 994
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 186/459 (40%), Gaps = 58/459 (12%)
Query: 91 VQSLIRAGDLDAASSVAR--HSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQ 148
++ L + G L A + H+ ++ ++ N ++ AM ++ +A++LF Q
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY--NTLLTAMCKSGNLAKAVSLFGEM-VQ 681
Query: 149 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 208
+I+P+ +Y ++I+ C +G+ +A+ + A P+ V Y G AG+
Sbjct: 682 RSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 741
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE----------------- 251
+ +M N GH D + N +I G+ +G ++K N+L E
Sbjct: 742 AGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801
Query: 252 -------------LKERCLVYDGVV-----NATYMEWFFNNGRDKEAMDSYKSLMDRQFK 293
L R ++ +G++ + + + + + K+ + R +
Sbjct: 802 HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVE 861
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 353
+ T N+L+ +G+ A+ L M T +++ DT + MV+ +F
Sbjct: 862 VDRYTFNMLISKCCANGEINWAFDLVKVM----TSLGI-SLDKDTCDAMVSVLNRNHRFQ 916
Query: 354 EA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 410
E+ L K G S+ Y +I+ C G + A + EE+ + + P
Sbjct: 917 ESRMVLHEMSKQGISPESRK-------YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 969
Query: 411 PTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-VVTNFCNRVFDELIKNDKVIDCAHILS 469
++ A K + D+A + M+ L + +F + KN VI+ +
Sbjct: 970 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASF-TTLMHLCCKNGNVIEALELRV 1028
Query: 470 KMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
M K D Y V+I GLCAKG + + E LY+ M+
Sbjct: 1029 VMSNCGLKLDLVSYNVLITGLCAKGDMALAFE-LYEEMK 1066
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 122/313 (38%), Gaps = 41/313 (13%)
Query: 258 VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA 317
VYD ++ + G +++++ ++ + F + TCN +L ++K G+ W+
Sbjct: 165 VYDILIRV-----YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 318 LFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---------------LATF--- 359
+ML P+ TFNI++N G F ++ + T+
Sbjct: 220 FLKEMLKRKICPDVA-----TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTV 274
Query: 360 -----RKAGTKS--------NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 406
+K K+ SK DV YN +I C + +++ L ++ + +
Sbjct: 275 LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334
Query: 407 SPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAH 466
P+ T+ TLI+ + ++ A ++ + M+ GL N + D I +
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 394
Query: 467 ILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFK 526
+ M + P Y V++ GLC D + ++ R GV V + +
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 454
Query: 527 KAGRGDEIERLLD 539
K G DE LL+
Sbjct: 455 KNGFLDEAVVLLN 467
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 163/394 (41%), Gaps = 53/394 (13%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
+++++ C +G++D AL L + +I + P +T+ HL G AG I +A L+REM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVI-PGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE--------RCLV----------- 258
G + + YN LI G + N+DKA LF+ + + C +
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 259 --------------------YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 298
D V+ M+ F NG +A++ +K + + V
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 299 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 358
NV++ L G A+ M+ P+ T+N +++ GKF EA
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVF-----TYNTLISALCKEGKFDEACDL 357
Query: 359 FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLID 418
GT N A D Y II C +G ++ A + SL P+V +ID
Sbjct: 358 H---GTMQNG-GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVID 413
Query: 419 AYMKMERIDDALKVFHRMVDAGLR--VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDP 476
Y + AL V + M+ G++ V TN N + +K ++ID + ++M
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYGVKPNVYTN--NALIHGYVKGGRLIDAWWVKNEMRSTKI 471
Query: 477 KPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
PD T Y +++ C G L + +L +++R G
Sbjct: 472 HPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 39/234 (16%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
++ L +G++ AA P VFT N +I+A+ + +++EA L H
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL-HGTMQNGG 365
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALE---------------LYRHII-ATAPFG------ 188
+ P+ +SY +I C G V+ A E L+ +I +G
Sbjct: 366 VAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSAL 425
Query: 189 ------------PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
P+ T L G++ GR+++A + EM + D+ YN L+
Sbjct: 426 SVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAA 485
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 290
LG+L A +L+DE+ R D + + GR K+A +SL+ R
Sbjct: 486 CTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKA----ESLLSR 535
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 77/195 (39%), Gaps = 39/195 (20%)
Query: 378 YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMV 437
+N++++ C+ G + +A+ L E+ SP+ ++ TLI + +D AL +F+ M
Sbjct: 159 HNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMN 218
Query: 438 DAGLR-----------------VVTN----------------------FCNRVFDELIKN 458
G+R V+ N C + D KN
Sbjct: 219 KYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKN 278
Query: 459 DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLR 518
V+ + +M +++ D Y V+IRGLC+ G + + + +++ GV
Sbjct: 279 GNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTY 338
Query: 519 EFVTEVFKKAGRGDE 533
+ K G+ DE
Sbjct: 339 NTLISALCKEGKFDE 353
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 2/172 (1%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+Q L GD++ A+ SS P V N +I R + A+++ + +
Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG- 435
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ PN+ + N +I+ + GR+ A + + +T P TY L + G + A
Sbjct: 436 VKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRST-KIHPDTTTYNLLLGAACTLGHLRLA 494
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV 262
L EML +G D + Y L+ G G L KA L ++ + D V
Sbjct: 495 FQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV 546
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 160/383 (41%), Gaps = 54/383 (14%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P T +I ++ + +EA+AL Q P++V+Y V+N C G D+AL
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRM-VQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
L + A A + V Y + +AL+L EM NKG + + Y++LIS
Sbjct: 239 NLLNKMEA-AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G A+ L ++ ER K+
Sbjct: 298 LCNYGRWSDASRLLSDMIER-------------------------------------KIN 320
Query: 296 P--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 353
P VT + L++ +K GK +A L+++M+ PN T++ ++N L +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF-----TYSSLINGFCMLDRLG 375
Query: 354 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
EA ++ K +V YN +I+ FC+ + + LF E+ + L + T+
Sbjct: 376 EA----KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDELIKNDKVIDCAHILSKM 471
TLI + + D+A VF +MV G+ ++T N + D L KN K+ + +
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY--NILLDGLCKNGKLAKAMVVFEYL 489
Query: 472 GERDPKPDPTCYEVVIRGLCAKG 494
+PD Y ++I G+C G
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAG 512
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 126/262 (48%), Gaps = 7/262 (2%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ SL + D A ++ RP V T +++I+ + R+++A L +
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI-ERK 318
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN+V+++ +I+ +G++ A +LY +I + P+ TY L GF R+ EA
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS-IDPNIFTYSSLINGFCMLDRLGEA 377
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+L M+ K + + YN LI+GF + +DK ELF E+ +R LV + V T +
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
FF A +K ++ +T N+LL+ L K+GK +A +F+ + + P+
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Query: 331 FQAVNSDTFNIMVNECFNLGKF 352
T+NIM+ GK+
Sbjct: 498 IY-----TYNIMIEGMCKAGKW 514
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 167/384 (43%), Gaps = 27/384 (7%)
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
++AI LF QS P+I+ ++ +++ + D+ + + + + TY
Sbjct: 60 DDAIGLFGVM-AQSRPFPSIIEFSKLLSAIAKMNKFDLVIS-FGEKMEILGISHNLYTYN 117
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
L F R+ AL LL +M+ G+ D + N+L++GF + A L D++ E
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 256 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 315
D V T + F + + EA+ ++ R + VT ++ L K G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 316 WALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV 375
L ++M +A N ++ +++ +AL F T+ +K +V
Sbjct: 238 LNLLNKM----EAAKIEA-NVVIYSTVIDSLCKYRHEDDALNLF----TEMENKGVRPNV 288
Query: 376 AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHR 435
Y+++IS C G S+A L ++ + ++P++ T LIDA++K ++ A K++
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 436 MVDAGL--------RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVI 487
M+ + ++ FC D++ + +L M +D P+ Y +I
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCML--------DRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 488 RGLCAKGLLDKSLELLYQVMRYGV 511
G C +DK +EL ++ + G+
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGL 424
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 183/421 (43%), Gaps = 27/421 (6%)
Query: 94 LIRAGDLDAA----SSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFF--FT 147
LI G L+ A S + R F TR +CN + ++R + + + FF
Sbjct: 202 LIDLGMLEEAIQCFSKMKRFRVFPKTR----SCNGL---LHRFAKLGKTDDVKRFFKDMI 254
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
+ P + +YN +I+ C EG V+ A L+ + P VTY + GF GR+
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
+ + EM + D + YN LI+ F + G L E + E+K L + V +T
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
++ F G ++A+ Y + R+ + P T L++ K G + A+ L ++ML
Sbjct: 374 VDAFCKEGMMQQAIKFYVDM--RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
N T+ +++ + + EA F K T ++A YN +I F
Sbjct: 432 GVEWNVV-----TYTALIDGLCDAERMKEAEELFGKMDTA----GVIPNLASYNALIHGF 482
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVT 445
+ + A L EL + + PD+ + T I +E+I+ A V + M + G++ +
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 446 NFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQ 505
+ D K+ + H+L +M E D + + V+I GLC L+ K+++ +
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 506 V 506
+
Sbjct: 603 I 603
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 193/464 (41%), Gaps = 33/464 (7%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ + + GD++AA + F P T N++I + R ++ + FF +
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC---FFEEMKD 325
Query: 151 IV--PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 208
+ P++++YN +IN C G++ + LE YR + P+ V+Y L F G +
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG-LKPNVVSYSTLVDAFCKEGMMQ 384
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 268
+A+ +M G + Y +LI ++GNL A L +E+ + + ++ V +
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 328
+ + R KEA + + + + N L+ +K +A L +++
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 504
Query: 329 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 388
P+ + + + E K + ++ G K+NS Y ++ + ++
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKV--VMNEMKECGIKANSLI-------YTTLMDAYFKS 555
Query: 389 GLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMV-DAGLRVVTNF 447
G +E L +E+ + V T LID K + + A+ F+R+ D GL+
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 448 CNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRG-------LCAKGLLDKSL 500
+ D L K+++V + +M ++ PD T Y ++ G L A L DK
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 501 E-------LLYQVMRYGVGVTNSL---REFVTEVFKKAGRGDEI 534
E L Y + +G+ N L R F+ E+ + DE+
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 111/503 (22%), Positives = 209/503 (41%), Gaps = 39/503 (7%)
Query: 56 IRPPLQHSPSRDPNAPRLPDSTSA-------LV----GPRLNLHNRVQSLIRAGDLDAAS 104
IR + + DP +L D T A LV P+L S+ R G +
Sbjct: 84 IRKVVHNDLWDDPGLEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVE 143
Query: 105 S--VARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNI-VPNIVSYNNV 161
S + H F + + N+++ M +K +F ++ N+ VP ++ +
Sbjct: 144 SYCIVAHILFCA--RMYYDANSVLKEMVLSK---ADCDVFDVLWSTRNVCVPGFGVFDAL 198
Query: 162 INTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG 221
+ D G ++ A++ + + F P + L F G+ + ++M+ G
Sbjct: 199 FSVLIDLGMLEEAIQCFSKMKRFRVF-PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAG 257
Query: 222 HGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAM 281
YN +I + G+++ A LF+E+K R LV D V + ++ F GR + +
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 282 DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNI 341
++ + D + +T N L+ K GK + +M N PN +++
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV-----SYST 372
Query: 342 MVNECFNLGKFHEALATF---RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 398
+V+ G +A+ + R+ G N Y ++I C+ G LS+A L
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT-------YTSLIDANCKIGNLSDAFRLG 425
Query: 399 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFC--NRVFDELI 456
E+ + +V T+ LID ER+ +A ++F +M AG V+ N N + +
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG--VIPNLASYNALIHGFV 483
Query: 457 KNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNS 516
K + +L+++ R KPD Y I GLC+ ++ + ++ ++ G+ +
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 517 LREFVTEVFKKAGRGDEIERLLD 539
+ + + + K+G E LLD
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLD 566
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 1/175 (0%)
Query: 118 TVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALEL 177
TV T +I + + K ++A+ F+ + N + +I+ C + +V+ A L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 178 YRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFL 237
+ ++ P Y L G G ++EAL L +M G D L Y +L+ G
Sbjct: 636 FEQMVQKG-LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLS 694
Query: 238 ELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 292
L KA +E+ + D V+ + ++ + G EA++ LM Q
Sbjct: 695 HCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 156/373 (41%), Gaps = 26/373 (6%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
V++ ++I+A + RY EA+ +F + P +++YN ++N G +
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKM-EEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+ + P A TY L EA + EM G D + YN L+ +
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY-- 324
Query: 239 LGNLDKANELFDELKERCL--------VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 290
G + E L E L Y+ +++A + +G EAM+ + ++
Sbjct: 325 -GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA-----YARDGMLDEAMELKNQMAEK 378
Query: 291 QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLG 350
K T LL + GK A ++F++M + PN TFN + N G
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC-----TFNAFIKMYGNRG 433
Query: 351 KFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 410
KF E + F + N + D+ +N +++ F +NG+ SE +F+E+ P+
Sbjct: 434 KFTEMMKIFDEI----NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 489
Query: 411 PTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSK 470
T TLI AY + + A+ V+ RM+DAG+ + N V L + +L++
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 471 MGERDPKPDPTCY 483
M + KP+ Y
Sbjct: 550 MEDGRCKPNELTY 562
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 175/433 (40%), Gaps = 52/433 (12%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P +T N +I R + EA +F + + V+YN +++ + R A++
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEM-KAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+ ++ F PS VTY L + G + EA++L +M KG D Y L+SGF
Sbjct: 336 VLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
G ++ A +F+E++ + +++ + N G+ E M + +
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
VT N LL V ++G ++ +F +M P +TFN +++ G F +A+
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE-----RETFNTLISAYSRCGSFEQAM 509
Query: 357 ATFRK---AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
+R+ AG D++ YN +++ G+ ++E + E+ P+ T+
Sbjct: 510 TVYRRMLDAGVTP-------DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 414 RTLIDAYMKMERI----DDALKVFHRMVD------AGLRVVTNFCN------RVFDELI- 456
+L+ AY + I A +V+ +++ L +V + C+ R F EL
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 457 ------------------KNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDK 498
+ V +L M ER P Y ++ K
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 499 SLELLYQVMRYGV 511
S E+L +++ G+
Sbjct: 683 SEEILREILAKGI 695
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 166/422 (39%), Gaps = 58/422 (13%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
RAG +++A S+ + +P + T NA I ++ E + +F + P+I
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI-NVCGLSPDI 454
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
V++N ++ G +++ + A F P T+ L + G +A+ + R
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE-RC----LVYDGVVNATYMEW 270
ML+ G D YN +++ G +++ ++ E+++ RC L Y +++A
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA----- 568
Query: 271 FFNNGRDK------------------------------------EAMDSYKSLMDRQFKM 294
+ NG++ EA ++ L +R F
Sbjct: 569 -YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 295 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 354
T N ++ + + +A + D M + P+ NS + M + + GK E
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY--MHSRSADFGKSEE 685
Query: 355 ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
L G K D+ YN +I +C N + +A +F E+ + + PDV T+
Sbjct: 686 ILREILAKGIKP-------DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
T I +Y ++A+ V M+ G R N N + D K ++ + + +
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
Query: 475 DP 476
DP
Sbjct: 799 DP 800
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 141/338 (41%), Gaps = 48/338 (14%)
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
+ A D + + D+ V +IS + G + A +F+ L+E D +
Sbjct: 155 LRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL 214
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK-KTQAWALFDQMLDNH 326
+ F N+GR +EA++ +K + + K T +T NV+L V K G + +L ++M +
Sbjct: 215 ISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG 274
Query: 327 TPPNFQAVNSDTFNIMVNECFNLGKFH-EALATFR--KAGTKSNSK-------------- 369
P ++ T+N ++ C G H EA F KA S K
Sbjct: 275 IAP-----DAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 370 ---------------AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
F+ + YN++IS + +G+L EA L ++ K PDV T+
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK----NDKVIDCAHILSK 470
TL+ + + +++ A+ +F M +AG + N C F+ IK K + I +
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCK--PNIC--TFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 471 MGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
+ PD + ++ G +D + +++ M+
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNG-MDSEVSGVFKEMK 481
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 122/297 (41%), Gaps = 10/297 (3%)
Query: 244 KANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLL 303
+A + F + K+ + D V A + GR A + + L + F + + L+
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLI 215
Query: 304 EVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAG 363
G+ +A +F +M ++ P T+N+++N GK
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLI-----TYNVILNV---FGKMGTPWNKITSLV 267
Query: 364 TKSNSKAFAMDVAGYNNIISRFCENGLL-SEAETLFEELCSKSLSPDVPTHRTLIDAYMK 422
K S A D YN +I+ C+ G L EA +FEE+ + S D T+ L+D Y K
Sbjct: 268 EKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 423 MERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTC 482
R +A+KV + MV G N + ++ + + + ++M E+ KPD
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 483 YEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
Y ++ G G ++ ++ + ++ G +++ G+ E+ ++ D
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 167/411 (40%), Gaps = 52/411 (12%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P V CN++++ + +++R +A ++ + + V N S ++ C+EG+V+V +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDN-YSTCILVKGMCNEGKVEVGRK 226
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L P+ V Y + G+ G I A + +E+ KG + +I+GF
Sbjct: 227 LIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGF 285
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKS--------LM 288
+ G+ ++ L E+KER L WF NN D + YK ++
Sbjct: 286 CKEGDFVASDRLLSEVKERGL--------RVSVWFLNNIIDAKYRHGYKVDPAESIGWII 337
Query: 289 DRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN-------FQAVNSD---- 337
K T N+L+ L K GKK A D+ PN QA
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 338 -------------------TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGY 378
T+ I+++ G +A+ K + + D A Y
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV----NMKVKLIDRGVSPDAAIY 453
Query: 379 NNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD 438
N ++S C+ G A+ LF E+ +++ PD + TLID +++ D+A KVF V+
Sbjct: 454 NMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE 513
Query: 439 AGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRG 489
G++V N + ++ + + +++M E PD Y +I G
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 162/337 (48%), Gaps = 13/337 (3%)
Query: 87 LHNRVQSLIRAG-DLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFF 145
L+N + + R G +D A S+ + +P V T N +I + + + A+ F
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIG-WIIANDCKPDVATYNILINRLCKEGKKEVAVG-FLDE 370
Query: 146 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 205
++ ++PN +SY +I +C D+A +L + A P VTY L G + +G
Sbjct: 371 ASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM-AERGCKPDIVTYGILIHGLVVSG 429
Query: 206 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 265
+ +A+++ +++++G D+ +YN L+SG + G A LF E+ +R ++ D V A
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
T ++ F +G EA + +++ K+ V N +++ + G +A A ++M +
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
H P + T++ +++ A+ FR K+ K +V Y ++I+ F
Sbjct: 550 HLVP-----DKFTYSTIIDGYVKQQDMATAIKIFRYM-EKNKCKP---NVVTYTSLINGF 600
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMK 422
C G AE F+E+ + L P+V T+ TLI + K
Sbjct: 601 CCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 164/408 (40%), Gaps = 62/408 (15%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ + GD A+ + R +V+ N II A YR Y A + ++
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR-HGYKVDPAESIGWIIAND 340
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
P++ +YN +IN C EG+ +VA+ + P+ ++Y L + + + A
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEA-SKKGLIPNNLSYAPLIQAYCKSKEYDIA 399
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
LL +M +G D + Y LI G + G++D
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD--------------------------- 432
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+A++ L+DR N+L+ L K G+ A LF +MLD + P+
Sbjct: 433 --------DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPD 484
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
+ + +++ G F EA RK + S K +DV +N +I FC +G+
Sbjct: 485 -----AYVYATLIDGFIRSGDFDEA----RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM--------VDAGLR 442
L EA + + L PD T+ T+ID Y+K + + A+K+F M V
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 443 VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
++ FC + ++ + +M RD P+ Y +IR L
Sbjct: 596 LINGFCCQGDFKMAE--------ETFKEMQLRDLVPNVVTYTTLIRSL 635
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 127/303 (41%), Gaps = 43/303 (14%)
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 268
E D+L + N+ ++++ + E G+L KA E++D + E +YD V +
Sbjct: 117 EIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVE---LYDSVPDV--- 170
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 328
+ CN LL +L+K + A ++D+M D
Sbjct: 171 ----------------------------IACNSLLSLLVKSRRLGDARKVYDEMCDRG-- 200
Query: 329 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 388
+V++ + I+V N GK RK K ++ YN II +C+
Sbjct: 201 ---DSVDNYSTCILVKGMCNEGKVEVG----RKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253
Query: 389 GLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFC 448
G + A +F+EL K P + T T+I+ + K + ++ + + GLRV F
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 449 NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
N + D ++ +D A + + D KPD Y ++I LC +G + ++ L + +
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 509 YGV 511
G+
Sbjct: 374 KGL 376
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/452 (20%), Positives = 168/452 (37%), Gaps = 53/452 (11%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S L+ L+ +Q+ ++ + D AS + +P + T +I + +
Sbjct: 372 SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHM 431
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
++A+ + + P+ YN +++ C GR A L+ ++ P A Y
Sbjct: 432 DDAVNM-KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL-PDAYVYA 489
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
L GFI +G EA + + KG D + +N +I GF G LD+A + + E
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549
Query: 256 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 315
LV D +T ++ + A+ ++ + + K VT L+ G A
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609
Query: 316 WALFDQMLDNHTPPNF---------QAVNSDTFN--------IMVNEC------FNL--- 349
F +M PN A S T +M N+C FN
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Query: 350 ---------------GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
G H + F + + S ++ A YN+ + C +G++ A
Sbjct: 670 GFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTA 729
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYM-----KMERIDDALKVFHRMVDAGLRVVTNFCN 449
+++ K SPD + ++ + K R D F + + GL V + +
Sbjct: 730 CMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMD----FCNLGEKGLEVAVRY-S 784
Query: 450 RVFDELIKNDKVIDCAHILSKMGERDPKPDPT 481
+V ++ + + + + IL M E+ +P
Sbjct: 785 QVLEQHLPQPVICEASTILHAMVEKADTKEPV 816
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 184/430 (42%), Gaps = 40/430 (9%)
Query: 124 AIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIA 183
+++ R +A+ +F + PN VSY+ +I+ C+ GR++ A L + +
Sbjct: 235 SLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL-KDQMG 293
Query: 184 TAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLD 243
PS TY L K G I +A +L EM+ +G + Y LI G G ++
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 244 KANELFDEL-KER----CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 298
+AN + ++ K+R + Y+ ++N + +GR A + + R K T
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALING-----YCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 299 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 358
N L+E L + GK +A L +MLDN P+ ++N++++ G + A
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIV-----SYNVLIDGLCREGHMNTAY-- 461
Query: 359 FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLID 418
K + N D + II+ FC+ G A + K +S D T TLID
Sbjct: 462 --KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 419 AYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKP 478
K+ + DAL + +V + + N + D L K KV + +L K+ + P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 479 DPTCYEVVIRGLCAKGLLDKSLELLYQVMR----------YGVGVTNSLREFVTEVFKKA 528
Y ++ GL G + S +L ++M+ Y + + N L +F
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRIL-ELMKLSGCLPNVYPYTI-IINGLCQF-------- 629
Query: 529 GRGDEIERLL 538
GR +E E+LL
Sbjct: 630 GRVEEAEKLL 639
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 202/475 (42%), Gaps = 66/475 (13%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+++L G +D A ++ +P V T +I + R + EA + +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM-VKDR 366
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P++++YN +IN +C +GRV A EL ++ P+ T+ L +G G+ +A
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLT-VMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD-----ELKERCLVYDGVVNA 265
+ LL+ ML+ G D + YN LI G G+++ A +L +++ CL + ++NA
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 266 ------------------------------TYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
T ++ G+ ++A+ ++L+ + T
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
P + NV+L++L K K + A+ ++ P+ T+ +V+ L + +
Sbjct: 546 PHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV-----TYTTLVD---GLIRSGDI 597
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+FR S +V Y II+ C+ G + EAE L + +SP+ T+
Sbjct: 598 TGSFRILELMKLSGCLP-NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAH--ILSKMGE 473
++ Y+ ++D AL+ MV+ G + + + + + K ID + +S +
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIAL 716
Query: 474 RDPKPDPT-----------------CYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
R+ P+ C +V R LC +G D+S +L+ V+ GV
Sbjct: 717 RETDPECINELISVVEQLGGCISGLCIFLVTR-LCKEGRTDESNDLVQNVLERGV 770
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 145/337 (43%), Gaps = 11/337 (3%)
Query: 178 YRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFL 237
YR + A F + YR + G A + ++L G DS + +L+ GF
Sbjct: 183 YRRMEADG-FVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFC 241
Query: 238 ELGNLDKANELFDEL-KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
NL A ++FD + KE + V + + GR +EA + ++ + +
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
T VL++ L G +A+ LFD+M+ PN T+ ++++ GK EA
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH-----TYTVLIDGLCRDGKIEEAN 356
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
RK + F V YN +I+ +C++G + A L + ++ P+V T L
Sbjct: 357 GVCRKM---VKDRIFP-SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 417 IDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDP 476
++ ++ + A+ + RM+D GL N + D L + + +LS M D
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 477 KPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGV 513
+PD + +I C +G D + L ++R G+ +
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 143/349 (40%), Gaps = 13/349 (3%)
Query: 159 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 218
N V+ D G AL + + F TY + A + LL EM+
Sbjct: 335 NQVLKQMNDYGN---ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV 391
Query: 219 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 278
G +++ YN LI + L++A +F++++E D V T ++ G
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 338
AMD Y+ + T +V++ L K G A LF +M+D PN T
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV-----T 506
Query: 339 FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 398
+NIM++ + AL +R + F D Y+ ++ G L EAE +F
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDM----QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 399 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKN 458
E+ K+ PD P + L+D + K ++ A + + M+ AGLR CN + ++
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 459 DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
+K+ + +L M +P Y +++ C G + Q+M
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLL-SCCTDGRSKLDMGFCGQLM 670
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 120/291 (41%), Gaps = 42/291 (14%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V +L RA A + + +P T N +I + RA NEA+ +F+ ++
Sbjct: 371 VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM-QEAG 429
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI--- 207
P+ V+Y +I+ H G +D+A+++Y+ + A P TY + AG +
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG-LSPDTFTYSVIINCLGKAGHLPAA 488
Query: 208 --------------------------------VEALDLLREMLNKGHGADSLVYNNLISG 235
AL L R+M N G D + Y+ ++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G L++A +F E++++ + D V ++ + G ++A Y++++ +
Sbjct: 549 LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC 346
TCN LL L+ K +A+ L ML P+ Q T+ ++++ C
Sbjct: 609 VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ-----TYTLLLSCC 654
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 143/349 (40%), Gaps = 13/349 (3%)
Query: 159 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 218
N V+ D G AL + + F TY + A + LL EM+
Sbjct: 335 NQVLKQMNDYGN---ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV 391
Query: 219 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 278
G +++ YN LI + L++A +F++++E D V T ++ G
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 338
AMD Y+ + T +V++ L K G A LF +M+D PN T
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV-----T 506
Query: 339 FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 398
+NIM++ + AL +R + F D Y+ ++ G L EAE +F
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDM----QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 399 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKN 458
E+ K+ PD P + L+D + K ++ A + + M+ AGLR CN + ++
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 459 DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
+K+ + +L M +P Y +++ C G + Q+M
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLL-SCCTDGRSKLDMGFCGQLM 670
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 120/291 (41%), Gaps = 42/291 (14%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V +L RA A + + +P T N +I + RA NEA+ +F+ ++
Sbjct: 371 VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM-QEAG 429
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI--- 207
P+ V+Y +I+ H G +D+A+++Y+ + A P TY + AG +
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG-LSPDTFTYSVIINCLGKAGHLPAA 488
Query: 208 --------------------------------VEALDLLREMLNKGHGADSLVYNNLISG 235
AL L R+M N G D + Y+ ++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G L++A +F E++++ + D V ++ + G ++A Y++++ +
Sbjct: 549 LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC 346
TCN LL L+ K +A+ L ML P+ Q T+ ++++ C
Sbjct: 609 VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ-----TYTLLLSCC 654
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 143/349 (40%), Gaps = 13/349 (3%)
Query: 159 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 218
N V+ D G AL + + F TY + A + LL EM+
Sbjct: 335 NQVLKQMNDYGN---ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMV 391
Query: 219 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 278
G +++ YN LI + L++A +F++++E D V T ++ G
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 338
AMD Y+ + T +V++ L K G A LF +M+D PN T
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV-----T 506
Query: 339 FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 398
+NIM++ + AL +R + F D Y+ ++ G L EAE +F
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDM----QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 399 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKN 458
E+ K+ PD P + L+D + K ++ A + + M+ AGLR CN + ++
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 459 DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
+K+ + +L M +P Y +++ C G + Q+M
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLL-SCCTDGRSKLDMGFCGQLM 670
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 120/291 (41%), Gaps = 42/291 (14%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V +L RA A + + +P T N +I + RA NEA+ +F+ ++
Sbjct: 371 VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM-QEAG 429
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI--- 207
P+ V+Y +I+ H G +D+A+++Y+ + A P TY + AG +
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG-LSPDTFTYSVIINCLGKAGHLPAA 488
Query: 208 --------------------------------VEALDLLREMLNKGHGADSLVYNNLISG 235
AL L R+M N G D + Y+ ++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G L++A +F E++++ + D V ++ + G ++A Y++++ +
Sbjct: 549 LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC 346
TCN LL L+ K +A+ L ML P+ Q T+ ++++ C
Sbjct: 609 VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ-----TYTLLLSCC 654
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 158/367 (43%), Gaps = 71/367 (19%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATA--PFGPSAVTYRHLTKGFISAGRIVEA 210
P++V++ ++N C EGRV AL L ++ P+G + G G A
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGT-------IINGLCKMGDTESA 60
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L+LL +M A ++YN +I + G+ A LF E+ ++ + D + + ++
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F +GR +A + +++RQ VT + L+ L+K GK ++A ++ ML P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
YN++I FC+
Sbjct: 181 --------------------------------------------TITYNSMIDGFCKQDR 196
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--------R 442
L++A+ + + + SKS SPDV T TLI+ Y K +R+D+ +++F M G+
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 443 VVTNFCNRVFDELIKNDKVIDCAH-ILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLE 501
++ FC +V D +D A +L+ M P+ ++ ++ LC+K L K+
Sbjct: 257 LIHGFC-QVGD--------LDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFA 307
Query: 502 LLYQVMR 508
+L + +
Sbjct: 308 ILEDLQK 314
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 13/280 (4%)
Query: 260 DGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALF 319
D V T M GR +A+ +L+DR + ++ L K G A L
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQAL----ALVDRMVEEGHQPYGTIINGLCKMGDTESALNLL 64
Query: 320 DQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 379
+M + H + +N +++ G A F T+ + K DV Y+
Sbjct: 65 SKMEETHIKAHVV-----IYNAIIDRLCKDGHHIHAQNLF----TEMHDKGIFPDVITYS 115
Query: 380 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDA 439
+I FC +G ++AE L ++ + ++PDV T LI+A +K ++ +A +++ M+
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 440 GLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKS 499
G+ T N + D K D++ D +L M + PD + +I G C +D
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 500 LELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
+E+ ++ R G+ + F + G D + LL+
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 275
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 2/246 (0%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L + GD ++A ++ + + V NAII + + + A LF +
Sbjct: 48 INGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG- 106
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P++++Y+ +I++ C GR A +L R +I P VT+ L + G++ EA
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIER-QINPDVVTFSALINALVKEGKVSEA 165
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++ +ML +G ++ YN++I GF + L+ A + D + + D V +T +
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ R M+ + + R VT L+ + G A L + M+ + PN
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Query: 331 FQAVNS 336
+ S
Sbjct: 286 YITFQS 291
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P V T + +I + R+ R+ +A L + I P++V+++ +IN EG+V A E
Sbjct: 109 PDVITYSGMIDSFCRSGRWTDAEQLLRDMI-ERQINPDVVTFSALINALVKEGKVSEAEE 167
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+Y ++ F P+ +TY + GF R+ +A +L M +K D + ++ LI+G+
Sbjct: 168 IYGDMLRRGIF-PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ +D E+F E+ R +V + V T + F G A D ++
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNY 286
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQM 322
+T +L L + +A+A+ + +
Sbjct: 287 ITFQSMLASLCSKKELRKAFAILEDL 312
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ +L++ G + A + PT T N++I + R N+A + ++S
Sbjct: 153 INALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS- 211
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELY-----RHIIATAPFGPSAVTYRHLTKGFISAG 205
P++V+++ +IN +C RVD +E++ R I+A + VTY L GF G
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA------NTVTYTTLIHGFCQVG 265
Query: 206 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 254
+ A DLL M++ G + + + ++++ L KA + ++L++
Sbjct: 266 DLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 188/437 (43%), Gaps = 26/437 (5%)
Query: 108 RHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCD 167
+ S + + + +C ++ A+ + R + ++ + I PN+ ++N VIN C
Sbjct: 177 KRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK-IQPNVFTFNVVINALCK 235
Query: 168 EGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA---GRIVEALDLLREMLNKGHGA 224
G+++ A ++ + P+ V+Y L G+ G++ +A +L+EM+
Sbjct: 236 TGKMNKARDVMED-MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSP 294
Query: 225 DSLVYNNLISGFLELGNLDKANELFDEL-----KERCLVYDGVVNATYMEWFFNNGRDKE 279
+ +N LI GF + NL + ++F E+ K + Y+ ++N N G+ E
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING-----LCNGGKISE 349
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
A+ ++ + +T N L+ K+ +A +F + P + +
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP-----TTRMY 404
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
N++++ LGK + A + + DV YN +I+ C NG + A+ LF+
Sbjct: 405 NMLIDAYCKLGKIDDGFAL----KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKND 459
+L SK L PD+ T L++ Y + A + M GL+ N V K
Sbjct: 461 QLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 460 KVIDCAHILSKM-GERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLR 518
+ ++ ++M ER + + Y V+++G KG L+ + LL +++ G+
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Query: 519 EFVTEVFKKAGRGDEIE 535
E V E G +IE
Sbjct: 580 EIVKEEMVDQGFVPDIE 596
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 144/321 (44%), Gaps = 15/321 (4%)
Query: 98 GDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVS 157
G + A +V + + P + T N +I ++ ++ +F Q ++ PN++S
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ-DVKPNVIS 333
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
YN++IN C+ G++ A+ + R + +A P+ +TY L GF + EALD+ +
Sbjct: 334 YNSLINGLCNGGKISEAISM-RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 218 LNKGHGA--DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
KG GA + +YN LI + +LG +D L +E++ +V D + NG
Sbjct: 393 --KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 276 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 335
+ A + L + VT ++L+E + G+ +A L +M P
Sbjct: 451 NIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL--- 506
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
T+NI++ G +A R K + M+VA YN ++ + + G L +A
Sbjct: 507 --TYNIVMKGYCKEGNL-KAATNMRTQMEK--ERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 396 TLFEELCSKSLSPDVPTHRTL 416
L E+ K L P+ T+ +
Sbjct: 562 MLLNEMLEKGLVPNRITYEIV 582
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 122/266 (45%), Gaps = 12/266 (4%)
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ NN R + +++K +K++ ++C L+ LLK + ++ +M+ PN
Sbjct: 163 YANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPN 222
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE--- 387
TFN+++N GK ++A R + +V YN +I +C+
Sbjct: 223 VF-----TFNVVINALCKTGKMNKA----RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNF 447
NG + +A+ + +E+ +SP++ T LID + K + + ++KVF M+D ++
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 448 CNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
N + + L K+ + + KM +P+ Y +I G C +L ++L++ V
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 508 RYGVGVTNSLREFVTEVFKKAGRGDE 533
G T + + + + K G+ D+
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDD 419
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 14/246 (5%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L G + A S+ + +P + T NA+I + EA+ +F Q
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG- 396
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
VP YN +I+ +C G++D L + + P TY L G G I A
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFAL-KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE-----LKERCLVYDGVVNA 265
L ++ +KG D + ++ L+ G+ G KA L E LK R L Y+ V
Sbjct: 456 KKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV--- 511
Query: 266 TYMEWFFNNGRDKEAMDSYKSL-MDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
M+ + G K A + + +R+ +M + NVLL+ + GK A L ++ML+
Sbjct: 512 --MKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 325 NHTPPN 330
PN
Sbjct: 570 KGLVPN 575
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 140/304 (46%), Gaps = 11/304 (3%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P V N ++ ++ ++A+ F+ + P++ ++N +IN +C + D+AL
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALR-FYQRMGKERAKPDVCTFNILINGYCRSSKFDLAL 248
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
+L+R + P+ V++ L +GF+S+G+I E + + EM+ G L+ G
Sbjct: 249 DLFREMKEKG-CEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDG 307
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G +D A L +L + ++ + +E + AM+ + L +
Sbjct: 308 LCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPC 367
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
+ C L+E L K G+ +A ++M++ P +S TFN+++ + + +A
Sbjct: 368 FIACTTLVEGLRKSGRTEKASGFMEKMMNAGILP-----DSVTFNLLLRDLCSSDHSTDA 422
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
+ ++SK + D Y+ ++S F + G E E L E+ K + PD+ T+
Sbjct: 423 ----NRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNR 478
Query: 416 LIDA 419
L+D
Sbjct: 479 LMDG 482
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 133/337 (39%), Gaps = 44/337 (13%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
+ + I+ +C ++D AL + + P+ Y + G++ +G + +AL + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
+ D +N LI+G+ D A +LF E+KE+ + V T + F ++G+
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
+E + +++ + + TC +L++ L + G+ A L +L+ P+
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPS------- 332
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
F+ Y +++ + C A +
Sbjct: 333 EFD-------------------------------------YGSLVEKLCGENKAVRAMEM 355
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
EEL K +P TL++ K R + A +M++AG+ + N + +L
Sbjct: 356 MEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCS 415
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKG 494
+D D + + +PD T Y V++ G +G
Sbjct: 416 SDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEG 452
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 93/199 (46%), Gaps = 4/199 (2%)
Query: 335 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
N +N +VN G +AL +++ G K +K DV +N +I+ +C + A
Sbjct: 192 NVGVYNTVVNGYVKSGDMDKALRFYQRMG-KERAKP---DVCTFNILINGYCRSSKFDLA 247
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDE 454
LF E+ K P+V + TLI ++ +I++ +K+ + M++ G R C + D
Sbjct: 248 LDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDG 307
Query: 455 LIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVT 514
L + +V D ++ + + P Y ++ LC + +++E++ ++ + G
Sbjct: 308 LCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPC 367
Query: 515 NSLREFVTEVFKKAGRGDE 533
+ E +K+GR ++
Sbjct: 368 FIACTTLVEGLRKSGRTEK 386
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 192/461 (41%), Gaps = 82/461 (17%)
Query: 87 LHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
L+N + L+ ++D V + V T N +I + + + EA+++F+
Sbjct: 186 LNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRML 245
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI-IATAPF-GPSAVTYRHLTKGFISA 204
+ + PN+VS+N +I+ C G + AL+L + + + F P+AVTY + GF A
Sbjct: 246 -KCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKA 304
Query: 205 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 264
GR+ A + +M+ G + Y L+ + G+ D+A L DE+ + LV + V+
Sbjct: 305 GRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIY 364
Query: 265 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
+ + W F G + AM + + + ++ T +++ L ++G +A Q+
Sbjct: 365 NSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQI-- 422
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
+ K D+ +N ++
Sbjct: 423 ------------------------------------------SEKKLVEDIVCHNTLMHH 440
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD------ 438
F + L+ A+ + + + LS D + TLID Y+K +++ AL+++ M+
Sbjct: 441 FVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSN 500
Query: 439 ----------------AG----------LRVVTNFCNRVFDELIKNDKVIDCAHILSKMG 472
AG ++ + + N + +E +K V + ILSKM
Sbjct: 501 LVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTY-NTLLNESLKTGNVEEADDILSKMQ 559
Query: 473 ERDPKPDPTC--YEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
++D + + + ++I LC G +K+ E+L ++ GV
Sbjct: 560 KQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGV 600
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 135/333 (40%), Gaps = 64/333 (19%)
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ PN V+YN+VIN C GR+D+A E R + + + TY L + AG EA
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLA-ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEA 345
Query: 211 LDLLREMLNKGHGADSLVYNNLI-----------------------------------SG 235
L L EM +KG ++++YN+++ G
Sbjct: 346 LRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRG 405
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G + +A E ++ E+ LV D V + T M F + + A S++ + +
Sbjct: 406 LCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLD 465
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD------------------ 337
++ L++ LK GK +A ++D M+ + N NS
Sbjct: 466 AISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVN 525
Query: 338 --------TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
T+N ++NE G EA K + K+ ++ +N +I+ C+ G
Sbjct: 526 AMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSL--VTFNIMINHLCKFG 583
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMK 422
+A+ + + + + + PD T+ TLI ++ K
Sbjct: 584 SYEKAKEVLKFMVERGVVPDSITYGTLITSFSK 616
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 10/281 (3%)
Query: 228 VYNNLISGFLELGNLDKANELFDELKER--CLVYDGVVNATYMEWFFNNGRDKEAMDSYK 285
V+++L+ + G+ A E+ ++ + C+ + N +M N YK
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNN--FMGCLLNVNEIDRFWKVYK 207
Query: 286 SLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE 345
+ + T N+++ K K +A ++F +ML PN +FN+M++
Sbjct: 208 EMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVV-----SFNMMIDG 262
Query: 346 CFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS 405
G AL K G S + + + YN++I+ FC+ G L AE + ++
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFV-SPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSG 321
Query: 406 LSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCA 465
+ + T+ L+DAY + D+AL++ M GL V T N + L +
Sbjct: 322 VDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAM 381
Query: 466 HILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
+L M ++ + D +V+RGLC G + +++E Q+
Sbjct: 382 SVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQI 422
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 11/221 (4%)
Query: 330 NFQAVNS--DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
++QA S D F+ +V C G A + + ++ F + V NN +
Sbjct: 140 SYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQ----TRAEGFCVSVHALNNFMGCLLN 195
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-VVTN 446
+ +++E+ S +V T +I ++ K ++ +AL VF+RM+ G+ V +
Sbjct: 196 VNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVS 255
Query: 447 FCNRVFDELIKNDKVIDCAHILSKMGERD---PKPDPTCYEVVIRGLCAKGLLDKSLELL 503
F N + D K + +L KMG P+ Y VI G C G LD + +
Sbjct: 256 F-NMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIR 314
Query: 504 YQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPR 544
+++ GV + + + +AG DE RL D T +
Sbjct: 315 GDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 9/266 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ + G+LD + S TRP VFT +A+I A+ + + + A LF +
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFD-EMCKRG 340
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
++PN V + +I+ H G +D+ E Y+ +++ P V Y L GF G +V A
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG-LQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+++ M+ +G D + Y LI GF G+++ A E+ E+ + + D V + +
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML-DNHTPP 329
GR +A + + ++ K VT ++++ K G + L +M D H P
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEA 355
T+N+++N LG+ A
Sbjct: 520 VV------TYNVLLNGLCKLGQMKNA 539
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 143/338 (42%), Gaps = 14/338 (4%)
Query: 154 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 213
N+ +N ++N C EG + A +++ I + P+ V++ L G+ G + E L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRS-LQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 214 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 273
+M D Y+ LI+ + +D A+ LFDE+ +R L+ + V+ T +
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 274 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 333
NG +SY+ ++ + + V N L+ K+G A + D M+ P
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP---- 413
Query: 334 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 393
+ T+ +++ G AL RK + + +D G++ ++ C+ G + +
Sbjct: 414 -DKITYTTLIDGFCRGGDVETALE-IRK---EMDQNGIELDRVGFSALVCGMCKEGRVID 468
Query: 394 AETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRV 451
AE E+ + PD T+ ++DA+ K K+ M G VVT N +
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY--NVL 526
Query: 452 FDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRG 489
+ L K ++ + +L M PD Y ++ G
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 130/329 (39%), Gaps = 44/329 (13%)
Query: 182 IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGN 241
I A F + + L F G I +A + E+ + + +N LI+G+ ++GN
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 242 LDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNV 301
LD+ L K M+ ++ D T +
Sbjct: 291 LDEGFRL-----------------------------KHQMEKSRTRPD------VFTYSA 315
Query: 302 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 361
L+ L K K A LFD+M PN +++ + + + ++
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPN---------DVIFTTLIHGHSRNGEIDLMKE 366
Query: 362 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYM 421
+ K SK D+ YN +++ FC+NG L A + + + + L PD T+ TLID +
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 422 KMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPT 481
+ ++ AL++ M G+ + + + + K +VID L +M KPD
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Query: 482 CYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
Y +++ C KG +LL ++ G
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 9/255 (3%)
Query: 284 YKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMV 343
Y ++D F + N+L+ K G + A +FD++ P +FN ++
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVV-----SFNTLI 282
Query: 344 NECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCS 403
N +G E + KS ++ DV Y+ +I+ C+ + A LF+E+C
Sbjct: 283 NGYCKVGNLDEGF-RLKHQMEKSRTRP---DVFTYSALINALCKENKMDGAHGLFDEMCK 338
Query: 404 KSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVID 463
+ L P+ TLI + + ID + + +M+ GL+ N + + KN ++
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 464 CAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTE 523
+I+ M R +PD Y +I G C G ++ +LE+ ++ + G+ + +
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 524 VFKKAGRGDEIERLL 538
K GR + ER L
Sbjct: 459 GMCKEGRVIDAERAL 473
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 137/337 (40%), Gaps = 46/337 (13%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
V+ N ++ + ++A +F T+ ++ P +VS+N +IN +C G +D L
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEI-TKRSLQPTVVSFNTLINGYCKVGNLDEGFRL- 297
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEA---------------------------- 210
+H + + P TY L ++ A
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 211 ---LDLLRE----MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 263
+DL++E ML+KG D ++YN L++GF + G+L A + D + R L D +
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 264 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 323
T ++ F G + A++ K + ++ V + L+ + K G+ A +ML
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 324 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 383
P + T+ +M++ G ++ S V YN +++
Sbjct: 478 RAGIKP-----DDVTYTMMMDAFCKKGDAQTGFKLLKEM----QSDGHVPSVVTYNVLLN 528
Query: 384 RFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY 420
C+ G + A+ L + + + + PD T+ TL++ +
Sbjct: 529 GLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
Query: 370 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDA 429
F ++V +N ++++FC+ G +S+A+ +F+E+ +SL P V + TLI+ Y K+ +D+
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 430 LKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAH-ILSKMGERDPKPDPTCYEVVIR 488
++ H+M + R + + + L K +K +D AH + +M +R P+ + +I
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENK-MDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 489 GLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPR-YRP 547
G G +D E +++ G+ L + F K G ++D R RP
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 548 PQLT 551
++T
Sbjct: 414 DKIT 417
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 2/145 (1%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ R GD++ A + + + +A++ M + R +A ++
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML-RAG 480
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P+ V+Y +++ C +G +L + + + PS VTY L G G++ A
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNA 539
Query: 211 LDLLREMLNKGHGADSLVYNNLISG 235
LL MLN G D + YN L+ G
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEG 564
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 123/281 (43%), Gaps = 9/281 (3%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P++V+YN +++++C GR+ A LY+ I+ P VTY L KG GR+ EA
Sbjct: 269 PDLVTYNTLVSSYCRRGRLKEAFYLYK-IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQ 327
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
M+++G D + YN LI + + G + ++ +L E+ +V D +E F
Sbjct: 328 TFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFV 387
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
GR A++ L + + C+ L+ L + GK A L D++++
Sbjct: 388 REGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEG----H 443
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
+T+N ++ EAL K K+ ++ +D Y +I C G
Sbjct: 444 EAKPETYNNLIESLSRCDAIEEALVL--KGKLKNQNQ--VLDAKTYRALIGCLCRIGRNR 499
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
EAE+L E+ + PD L+ Y K D A ++
Sbjct: 500 EAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLL 540
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 9/281 (3%)
Query: 259 YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWAL 318
+D VV ++ + G +E ++ ++D F ++ VTCN LL LLK W +
Sbjct: 164 WDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQV 223
Query: 319 FDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGY 378
+ M PN + TFNI+ N N F E K + F D+ Y
Sbjct: 224 YSVMCRVGIHPN-----TYTFNILTNVFCNDSNFREVDDFLEKM----EEEGFEPDLVTY 274
Query: 379 NNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD 438
N ++S +C G L EA L++ + + + PD+ T+ +LI K R+ +A + FHRMVD
Sbjct: 275 NTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVD 334
Query: 439 AGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDK 498
G++ N + K + +L +M PD +V++ G +G L
Sbjct: 335 RGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLS 394
Query: 499 SLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
++ + ++ R V + + +F+ + G+ + LLD
Sbjct: 395 AVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLD 435
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 140/363 (38%), Gaps = 38/363 (10%)
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
++ P+ T+ LT F + E D L +M +G D + YN L+S + G
Sbjct: 226 VMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRG 285
Query: 241 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 300
L +A L+ + R +V D V + ++ +GR +EA ++ ++DR K ++ N
Sbjct: 286 RLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYN 345
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA----- 355
L+ K G Q+ L +ML N P + T ++V G+ A
Sbjct: 346 TLIYAYCKEGMMQQSKKLLHEMLGNSVVP-----DRFTCKVIVEGFVREGRLLSAVNFVV 400
Query: 356 ------------LATFRKAGTKSNSKAFA--------MDVAG-------YNNIISRFCEN 388
+ F K FA ++ G YNN+I
Sbjct: 401 ELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRC 460
Query: 389 GLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFC 448
+ EA L +L +++ D T+R LI ++ R +A + M D+ ++ + C
Sbjct: 461 DAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFIC 520
Query: 449 NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGL-LDKSLELLYQVM 507
+ K +LS DP Y +++ +C G K+LEL ++
Sbjct: 521 GALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQ 580
Query: 508 RYG 510
R G
Sbjct: 581 RLG 583
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 152/336 (45%), Gaps = 16/336 (4%)
Query: 170 RVDVALELYRHIIATAPFGPSAVTYRHLT---KGFISAGRIVEALDLLREMLNKGHGADS 226
R+D+ LE++R ++ + +T LT +G G + ++ L++E KG ++
Sbjct: 204 RIDLCLEIFRRMVDSGV----KITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEA 259
Query: 227 LVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKS 286
YN +I+ +++ + + +K+ +VY+ V ME NG+ +A +
Sbjct: 260 YTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 287 LMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC 346
+ +R + L+ + G +A+ LFD++ + P+ S T+ +++
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS-----SYTYGALIDGV 374
Query: 347 FNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 406
+G+ A + SK + +N +I +C G++ EA +++ + K
Sbjct: 375 CKVGEMGAAEILMNEM----QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
Query: 407 SPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAH 466
DV T T+ + +++R D+A + RM++ G+++ T + D K V +
Sbjct: 431 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 467 ILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
+ +M + +P+ Y V+I C +G + ++ +L
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 166/403 (41%), Gaps = 54/403 (13%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V+ L R G+++ + + + + +P +T N II A + + ++ + +
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM-KKDG 289
Query: 151 IVPNIVSYN-----------------------------------NVINTHCDEGRVDVAL 175
+V N V+Y ++I+ +C +G + A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
L+ + PS+ TY L G G + A L+ EM +KG +V+N LI G
Sbjct: 350 LLFDELTEKG-LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
+ G +D+A+ ++D ++++ D T F R EA +M+ K++
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLS 468
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
V+ L++V K G +A LF +M PN + T+N+M+ GK EA
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN-----AITYNVMIYAYCKQGKIKEA 523
Query: 356 LATFRKAGTKSNSKAFAMD--VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
RK ++N +A MD Y ++I C + EA LF E+ K L + T+
Sbjct: 524 ----RKL--RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTY 577
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELI 456
+I K + D+A ++ M G + N+V+ LI
Sbjct: 578 TVMISGLSKAGKSDEAFGLYDEMKRKGYTID----NKVYTALI 616
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVV 444
+ +NG+ E +F+ + K LS D + + A K RID L++F RMVD+G+++
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 445 TNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLY 504
V + L + +V ++ + + KP+ Y +I + +E +
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS-GVEGVL 282
Query: 505 QVMRY-GVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
+VM+ GV + E+ K G+ + E+L D
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFD 318
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 125/295 (42%), Gaps = 9/295 (3%)
Query: 193 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 252
TY + A + E LL EM+ G +++ YN LI + L +A +F+++
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 253 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 312
+E D V T ++ G AMD Y+ + + T +V++ L K G
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 313 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 372
A LF +M+ PN TFNIM+ + AL +R + F
Sbjct: 481 PAAHRLFCEMVGQGCTPNLV-----TFNIMIALHAKARNYETALKLYRDM----QNAGFQ 531
Query: 373 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKV 432
D Y+ ++ G L EAE +F E+ K+ PD P + L+D + K +D A +
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 433 FHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVI 487
+ M+ AGLR CN + ++ ++ + ++L M P Y +++
Sbjct: 592 YQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 117/291 (40%), Gaps = 42/291 (14%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V +L RA + + +P T N +I + RA EA+ +F+ ++
Sbjct: 366 VGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM-QEAG 424
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI--- 207
P+ V+Y +I+ H G +D+A+++Y+ + A P TY + AG +
Sbjct: 425 CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QEAGLSPDTFTYSVIINCLGKAGHLPAA 483
Query: 208 --------------------------------VEALDLLREMLNKGHGADSLVYNNLISG 235
AL L R+M N G D + Y+ ++
Sbjct: 484 HRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEV 543
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
G L++A +F E++ + V D V ++ + G +A Y++++ +
Sbjct: 544 LGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPN 603
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC 346
TCN LL L+ + ++A+ L ML P+ Q T+ ++++ C
Sbjct: 604 VPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ-----TYTLLLSCC 649
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 158/368 (42%), Gaps = 16/368 (4%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L RAG + A + S P C A++ + A++ + A + +
Sbjct: 156 INGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSAR 215
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ + V YN +I+ C GR++ A E + ++ P VTY L + + A
Sbjct: 216 VKLSTVVYNALISGFCKAGRIEKA-EALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRA 274
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA-NELFDELKERCLVYDGVVNATYME 269
++ EM+ G D+ YN L+ + + DK N + E++ R D V +T +E
Sbjct: 275 EGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIE 333
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
F ++A ++ + + M VT L++ L+ G + A L DQM + P
Sbjct: 334 TFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSP 393
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
+ + +++ G +A F + D YN++IS C +G
Sbjct: 394 -----DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP----DAISYNSLISGLCRSG 444
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCN 449
++EA LFE++ K PD T + +I ++ +++ A KV+ +M+D G + +
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRD--- 501
Query: 450 RVFDELIK 457
V D LIK
Sbjct: 502 -VSDTLIK 508
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 201/499 (40%), Gaps = 76/499 (15%)
Query: 80 LVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAI 139
L RL +R+ +L+++G +D A V SS R F N I + R R+ A
Sbjct: 5 LGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAE 64
Query: 140 ALFHFF---------FTQSNIV-------------------------PNIVSYNNVINTH 165
A++ FT S + P+I ++N ++
Sbjct: 65 AIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLL 124
Query: 166 CDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGAD 225
C E +V A++ + ++ P V+Y L G AG++ +A+++ M+ G D
Sbjct: 125 CRENKVGFAVQTFFCMVQRGR-EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Query: 226 SLVYNNLISGFLELGNLDKANELF-DELKERCLVYDGVVNATYMEWFFNNGR--DKEAMD 282
+ L+ G +D A E+ +E+K + VV + F GR EA+
Sbjct: 184 NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALK 243
Query: 283 SYKSLMDRQFKMTPVTCNVLLEV----------------LLKHGKKTQAWALFDQMLDNH 326
SY S + + + VT NVLL +++ G + A++ ++Q+L H
Sbjct: 244 SYMSKIGCEPDL--VTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYS-YNQLLKRH 300
Query: 327 TPPNFQAVNSDTFNIMVNE------CFNLGKFHEALATFRKAGTKSNS---------KAF 371
+ +N MV E C ++ + + TF +A + K
Sbjct: 301 CRVSHP---DKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGM 356
Query: 372 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALK 431
M+V Y ++I F G S A+ L +++ LSPD + T++D K +D A
Sbjct: 357 VMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYG 416
Query: 432 VFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLC 491
VF+ M++ + N + L ++ +V + + M ++ PD ++ +I GL
Sbjct: 417 VFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLI 476
Query: 492 AKGLLDKSLELLYQVMRYG 510
L + ++ Q+M G
Sbjct: 477 RGKKLSAAYKVWDQMMDKG 495
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/387 (18%), Positives = 151/387 (39%), Gaps = 15/387 (3%)
Query: 156 VSYNNVINTHCDEGRVDVALELY---RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
++Y + I G +D A++++ RH + + + Y + R A
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRH----SSYRVFSFDYNRFIGVLVRESRFELAEA 65
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
+ +M G Y+ ISG ++ D + L +++ + D Y++
Sbjct: 66 IYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLC 125
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
+ A+ ++ ++ R + V+ +L+ L + GK T A +++ M+ + P+ +
Sbjct: 126 RENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNK 185
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
A + ++V C + + + S + YN +IS FC+ G +
Sbjct: 186 ACAA----LVVGLCHA----RKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIE 237
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
+AE L + PD+ T+ L++ Y + A V MV +G+++ N++
Sbjct: 238 KAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL 297
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG 512
+ C + + K E D Y +I C K+ L ++ + G+
Sbjct: 298 KRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMV 357
Query: 513 VTNSLREFVTEVFKKAGRGDEIERLLD 539
+ + + F + G ++LLD
Sbjct: 358 MNVVTYTSLIKAFLREGNSSVAKKLLD 384
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 167/415 (40%), Gaps = 48/415 (11%)
Query: 130 YRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAP-FG 188
+++ ++A +LF+ S I ++ +N+V+ ++ V+ ++L++HI+ + P F
Sbjct: 60 FKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR 119
Query: 189 PSAVTYRHLTKGFISA--GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKAN 246
P T+ L A I +L M+N G D + + + E G +D
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD--- 176
Query: 247 ELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 306
EA D K L ++ T N LL+ L
Sbjct: 177 --------------------------------EAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 307 LKHGKKTQAWALFDQMLDN-HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 365
K + D+M D+ P+ +F I+++ N EA+ K G
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLV-----SFTILIDNVCNSKNLREAMYLVSKLG-- 257
Query: 366 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMER 425
+ F D YN I+ FC SEA +++++ + + PD T+ TLI K R
Sbjct: 258 --NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 426 IDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEV 485
+++A MVDAG T + + + + + + +L +M R P+ Y
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNT 375
Query: 486 VIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDF 540
++ GLC L+DK +EL + GV + ++ + K+G+ E + D+
Sbjct: 376 LLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDY 430
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 159/372 (42%), Gaps = 22/372 (5%)
Query: 123 NAIIAAMYRAKRYNEAIALF-HFFFTQSNIVPNIVSYNNVINTHC---DEGRVDVALELY 178
N+++ + N+ + LF H +Q N P ++ +++ C D +V L
Sbjct: 89 NSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL- 147
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+++ P VT + GR+ EA DL++E+ K D+ YN L+ +
Sbjct: 148 -NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 239 LGNLDKANELFDELKERCLVYDGVVNATYM-EWFFNNGRDKEAMDSYKSLMDRQFKMTPV 297
+L E DE+++ V +V+ T + + N+ +EAM L + FK
Sbjct: 207 CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA-- 355
N +++ K ++A ++ +M + P+ T+N ++ G+ EA
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD-----QITYNTLIFGLSKAGRVEEARM 321
Query: 356 -LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
L T AG + D A Y ++++ C G A +L EE+ ++ +P+ T+
Sbjct: 322 YLKTMVDAG-------YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYN 374
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
TL+ K +D ++++ M +G+++ +N + L+K+ KV + + +
Sbjct: 375 TLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDS 434
Query: 475 DPKPDPTCYEVV 486
D + Y +
Sbjct: 435 KSLSDASAYSTL 446
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 127/301 (42%), Gaps = 12/301 (3%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P T + + ++ R +EA L T+ + P+ +YN ++ C + V E
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKEL-TEKHSPPDTYTYNFLLKHLCKCKDLHVVYE 215
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+ P V++ L ++ + EA+ L+ ++ N G D +YN ++ GF
Sbjct: 216 FVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
L +A ++ ++KE + D + T + GR +EA K+++D ++
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDT 335
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
T L+ + + G+ A +L ++M PN N+ + + G E
Sbjct: 336 ATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG--MELY 393
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE-ELCSKSLSPDVPTHRT 415
+ +G K S GY ++ ++G ++EA +F+ + SKSLS D + T
Sbjct: 394 EMMKSSGVKLESN-------GYATLVRSLVKSGKVAEAYEVFDYAVDSKSLS-DASAYST 445
Query: 416 L 416
L
Sbjct: 446 L 446
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 160/359 (44%), Gaps = 46/359 (12%)
Query: 189 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA-DSLVYNNLISGFLELGNLDKANE 247
P++ TY + + G+ + ++ EM N+G D++ Y+ LIS + +LG D A
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 248 LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL 307
LFDE+K+ C+ + T + +F G+ ++A+D ++ + T T L++ L
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 308 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 367
K G+ +A+ + ML + P+ +N+ ++N +G+ E F + G
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVVFLNN-----LMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 368 SKAFAMDVAGYNNIISRFCENGL-LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERI 426
+ V YN +I E+ +SE + F+++ + S+SP T+ LID Y K R+
Sbjct: 370 TPT----VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 427 DDALKVFHRMVDAGL----------------------------RVVTNFCN---RVFDEL 455
+ AL + M + G + NF N RV+ +
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485
Query: 456 IKN----DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
IK+ K+ + + ++M + PD Y ++ G+ G+++++ LL ++ G
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 199/460 (43%), Gaps = 25/460 (5%)
Query: 87 LHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
L V++L RA + A SV + +PT T N++I + + ++ + ++
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMC 224
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 206
+ + P+ ++Y+ +I+++ GR D A+ L+ + P+ Y L + G+
Sbjct: 225 NEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNC-MQPTEKIYTTLLGIYFKVGK 283
Query: 207 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 266
+ +ALDL EM G Y LI G + G +D+A + ++ L D V
Sbjct: 284 VEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNN 343
Query: 267 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK---HGKKTQAWALFDQM- 322
M GR +E + + + + T V+ N +++ L + H + +W FD+M
Sbjct: 344 LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW--FDKMK 401
Query: 323 LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNII 382
D+ +P F T++I+++ + +AL + + K F A Y ++I
Sbjct: 402 ADSVSPSEF------TYSILIDGYCKTNRVEKALLLLEEM----DEKGFPPCPAAYCSLI 451
Query: 383 SRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR 442
+ + A LF+EL + + +I + K ++ +A+ +F+ M + G
Sbjct: 452 NALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
Query: 443 VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
N + ++K + + +L KM E + D + +++ G G+ +++E+
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 503 LYQVMRYGV---GVT-NSLREFVTEVFKKAGRGDEIERLL 538
+ G+ GVT N+L F AG +E R++
Sbjct: 572 FETIKHSGIKPDGVTYNTL----LGCFAHAGMFEEAARMM 607
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 164/408 (40%), Gaps = 53/408 (12%)
Query: 66 RDPNAPRLPDSTSA-LVGPRLNLHNRVQSL-IRAGDLDAASSVARHSTFSSTRPTVFTCN 123
R+ +A RL D + P ++ + + + G ++ A + + PTV+T
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307
Query: 124 AIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI-- 181
+I + +A R +EA F+ + + P++V NN++N GRV+ ++ +
Sbjct: 308 ELIKGLGKAGRVDEAYG-FYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGM 366
Query: 182 ------------IATAPF---------------------GPSAVTYRHLTKGFISAGRIV 208
+ A F PS TY L G+ R+
Sbjct: 367 WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 426
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 268
+AL LL EM KG Y +LI+ + + ANELF ELKE V A +
Sbjct: 427 KALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMI 486
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 328
+ F G+ EA+D + + ++ N L+ ++K G +A +L +M +N
Sbjct: 487 KHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCR 546
Query: 329 PNFQAVNSDTFNIMVNECFNLG---KFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
+ ++ NI++N G + E T + +G K D YN ++ F
Sbjct: 547 ADI-----NSHNIILNGFARTGVPRRAIEMFETIKHSGIKP-------DGVTYNTLLGCF 594
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
G+ EA + E+ K D T+ +++DA ++ D + F
Sbjct: 595 AHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 141/361 (39%), Gaps = 52/361 (14%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P + YN +++ G D+AL +Y S T+ L KG AGRI E L+
Sbjct: 226 PRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEEST-TFMILVKGLCKAGRIEEMLE 284
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
+L+ M D Y +I + GNLD + ++DE++ + D + T +
Sbjct: 285 ILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLC 344
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
+GR + + + + +Q + VL+E + GK A L++ ++D+
Sbjct: 345 KDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDS------- 397
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
+ D+ YN +I C +
Sbjct: 398 -------------------------------------GYIADIGIYNAVIKGLCSVNQVD 420
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRV---VTNFCN 449
+A LF+ + L PD T ++ AY+ M R+ D V R+ + G V +T F
Sbjct: 421 KAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFK 480
Query: 450 RVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRY 509
+ + KN +D +IL G + Y +++ L G + KSL L Y++ +
Sbjct: 481 LLCADEEKNAMALDVFYILKTKGH----GSVSVYNILMEALYKMGDIQKSLSLFYEMRKL 536
Query: 510 G 510
G
Sbjct: 537 G 537
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 172/410 (41%), Gaps = 48/410 (11%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P VF N I+ A+ + ++ A+A++ F + +V ++ ++ C GR++ L
Sbjct: 225 KPRVFLYNRIMDALVKNGYFDLALAVYEDF-KEDGLVEESTTFMILVKGLCKAGRIEEML 283
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
E+ + + P Y + K +S G + +L + EM D + Y L+ G
Sbjct: 284 EILQRMRENLC-KPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVG 342
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
+ G +++ ELF E+K + ++ D + +E F +G+ + A + ++ L+D +
Sbjct: 343 LCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIAD 402
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
N +++ L + +A+ LF ++ P+F+ ++ IMV A
Sbjct: 403 IGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSP----IMV-----------A 447
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL-LSEAET-LFEELCS----KSLSPD 409
+ ++ ++N++ R E G +S+ T F+ LC+ +++ D
Sbjct: 448 YVVMNR-------------LSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALD 494
Query: 410 ------------VPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
V + L++A KM I +L +F+ M G ++ + ++
Sbjct: 495 VFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVE 554
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
V K+ E P Y + +GLC G +D + L+ + +
Sbjct: 555 KGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECL 604
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVF----TCNAIIAAMYRAKRYNEAIALFHFFF 146
+++L + GD+ + S+ F R F + +I + K +A FH
Sbjct: 514 MEALYKMGDIQKSLSL-----FYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKI 568
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS----AVTYRHLTKGFI 202
+ + VP+I +Y ++ C G +D + L R + GP A+T H+ KG
Sbjct: 569 IEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKG-S 627
Query: 203 SAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV 262
+A ++++ +D EM +G + ++Y +ISG + G + A E+F ELK+R ++ +
Sbjct: 628 NAEKVMKVVD---EMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEAD 684
Query: 263 VNATYMEWFFNNGRDKEA 280
+ Y E + K A
Sbjct: 685 M-VVYEEMLIEQTKKKTA 701
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 95/234 (40%), Gaps = 10/234 (4%)
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
+N R Y+ + FK N +++ L+K+G A A+++ ++
Sbjct: 205 DNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEE-- 262
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
S TF I+V G+ E L ++ DV Y +I G L
Sbjct: 263 ---STTFMILVKGLCKAGRIEEMLEILQRM----RENLCKPDVFAYTAMIKTLVSEGNLD 315
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
+ +++E+ + PDV + TL+ K R++ ++F M + + +
Sbjct: 316 ASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLI 375
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
+ + + KV ++ + + D Y VI+GLC+ +DK+ + L+QV
Sbjct: 376 EGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYK-LFQV 428
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 165/394 (41%), Gaps = 60/394 (15%)
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
TC I+ A+ N AI F PN++++ ++I+ C +G + A E+
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMI-DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEE 312
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML-NKGHGADSLVYNNLISGFLEL 239
++ + P+ T+ L G G +A L +++ + + + Y ++I G+ +
Sbjct: 313 MVRNG-WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKE 371
Query: 240 GNLDKANELFDELKERCL-----VYDGVVNATYMEWFFNNGRDKEAMDSYKSLM-DRQFK 293
L++A LF +KE+ L Y ++N F GR E M+ LM D F
Sbjct: 372 DKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF--GRAYELMN----LMGDEGFM 425
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 353
T N ++ L K + +A+ ++L+ +A + T+ I++ E +
Sbjct: 426 PNIYTYNAAIDSLCKKSRAPEAY----ELLNKAFSCGLEA-DGVTYTILIQEQCKQNDIN 480
Query: 354 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
+ALA F + N F D+ N +I+ FC + E+E LF+ + S L P T+
Sbjct: 481 QALAFF----CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETY 536
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGE 473
++I Y K ID ALK FH M G C
Sbjct: 537 TSMISCYCKEGDIDLALKYFHNMKRHG-----------------------CV-------- 565
Query: 474 RDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
PD Y +I GLC K ++D++ + LY+ M
Sbjct: 566 ----PDSFTYGSLISGLCKKSMVDEACK-LYEAM 594
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 168/411 (40%), Gaps = 48/411 (11%)
Query: 173 VALELYRH-----------IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG 221
V E +RH ++A + R + + F GR+ EA+ ++ +M N+G
Sbjct: 118 VGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQG 177
Query: 222 HGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAM 281
S+ N ++ +ELG ++ A +FDE+ R +V D + F +G+ +EA
Sbjct: 178 LTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEAD 237
Query: 282 DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNI 341
++ R F TC ++L L ++G +A F +M+D PN +N F
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNL--IN---FTS 292
Query: 342 MVNECFNLGKFHEA---LATFRKAGTKSN-----------------SKAFAM-------- 373
+++ G +A L + G K N KAF +
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 374 ----DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDA 429
+V Y ++I +C+ L+ AE LF + + L P+V T+ TLI+ + K A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 430 LKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRG 489
++ + M D G N D L K + + +L+K + D Y ++I+
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 490 LCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDF 540
C + ++++L ++ + G L + F + + E ERL
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 155/397 (39%), Gaps = 17/397 (4%)
Query: 85 LNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHF 144
+N + + L + G + A + + +P V+T A+I + + +A LF
Sbjct: 288 INFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLK 347
Query: 145 FFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISA 204
PN+ +Y ++I +C E +++ A L+ + F P+ TY L G A
Sbjct: 348 LVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF-PNVNTYTTLINGHCKA 406
Query: 205 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 264
G A +L+ M ++G + YN I + +A EL ++ L DGV
Sbjct: 407 GSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTY 466
Query: 265 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
++ +A+ + + F+ N+L+ + K ++ LF ++
Sbjct: 467 TILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVS 526
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM--DVAGYNNII 382
P +T+ M++ G AL F N K D Y ++I
Sbjct: 527 LGLIP-----TKETYTSMISCYCKEGDIDLALKYFH------NMKRHGCVPDSFTYGSLI 575
Query: 383 SRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR 442
S C+ ++ EA L+E + + LSP T TL Y K +A+ + +D L
Sbjct: 576 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM-ILLEPLDKKLW 634
Query: 443 VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPD 479
+ T + +L KV A K+ E+D D
Sbjct: 635 IRT--VRTLVRKLCSEKKVGVAALFFQKLLEKDSSAD 669
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 158/370 (42%), Gaps = 11/370 (2%)
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
T +II+A+ + R EA ALF QS I P +YN ++ + G + A +
Sbjct: 306 TLVSIISALADSGRTLEAEALFEEL-RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSE 364
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
+ P TY L +++AGR A +L+EM +S V++ L++GF + G
Sbjct: 365 M-EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG 423
Query: 241 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 300
K ++ E+K + D ++ F AM ++ ++ + VT N
Sbjct: 424 EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 360
L++ KHG+ A +F+ M P + T+NIM+N + E +
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEAMERRGCLPC-----ATTYNIMINSYGD----QERWDDMK 534
Query: 361 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY 420
+ K S+ +V + ++ + ++G ++A EE+ S L P + LI+AY
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 421 MKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDP 480
+ + A+ F M GL+ N + + ++ + + +L M E KPD
Sbjct: 595 AQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDV 654
Query: 481 TCYEVVIRGL 490
Y +++ L
Sbjct: 655 VTYTTLMKAL 664
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 176/431 (40%), Gaps = 29/431 (6%)
Query: 125 IIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT 184
+I A+ R+++ EA F +Q + + +YN +I ++ AL L +
Sbjct: 173 LIHALGRSEKLYEA-----FLLSQKQTLTPL-TYNALIGACARNNDIEKALNLIAKMRQD 226
Query: 185 APFGPSAVTYRHLTKGFISAGRI--VEALDLLREMLNKGHGADSLVYNNLISGFLELGNL 242
+ V Y + + + +I V L L +E+ D + N++I GF + G+
Sbjct: 227 G-YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 243 DKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT--CN 300
KA +L + L + + ++GR EA ++ L RQ + P T N
Sbjct: 286 SKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL--RQSGIKPRTRAYN 343
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---LA 357
LL+ +K G A ++ +M P+ T++++++ N G++ A L
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPD-----EHTYSLLIDAYVNAGRWESARIVLK 398
Query: 358 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
+ NS F+ +AG F + G + + +E+ S + PD + +I
Sbjct: 399 EMEAGDVQPNSFVFSRLLAG-------FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI 451
Query: 418 DAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPK 477
D + K +D A+ F RM+ G+ N + D K+ + I + M R
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 478 PDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGR-GDEIER 536
P T Y ++I + D LL ++ G+ + +V+ K+GR D IE
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 537 LLDFNTPRYRP 547
L + + +P
Sbjct: 572 LEEMKSVGLKP 582
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 166/423 (39%), Gaps = 23/423 (5%)
Query: 118 TVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD--VAL 175
T T NA+I A R +A+ L Q + V+Y+ VI + ++D + L
Sbjct: 196 TPLTYNALIGACARNNDIEKALNLIAKM-RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLL 254
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
LY+ I + GF +G +AL LL G A + ++IS
Sbjct: 255 RLYKEI-ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 236 FLELGNLDKANELFDELKE-----RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 290
+ G +A LF+EL++ R Y+ ++ + G K+A + R
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKG-----YVKTGPLKDAESMVSEMEKR 368
Query: 291 QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLG 350
T ++L++ + G+ A + +M PN S F+ ++ + G
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPN-----SFVFSRLLAGFRDRG 423
Query: 351 KFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 410
++ + ++ S D YN +I F + L A T F+ + S+ + PD
Sbjct: 424 EWQKTFQVLKEM----KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDR 479
Query: 411 PTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSK 470
T TLID + K R A ++F M G N + + ++ D +L K
Sbjct: 480 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGK 539
Query: 471 MGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGR 530
M + P+ + ++ G + ++E L ++ G+ ++++ + + + G
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 531 GDE 533
++
Sbjct: 600 SEQ 602
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/352 (17%), Positives = 135/352 (38%), Gaps = 46/352 (13%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ + + AG ++A V + +P F + ++A + + +
Sbjct: 381 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM-KSIG 439
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ P+ YN VI+T +D A+ + +++ P VT+ L GR + A
Sbjct: 440 VKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG-IEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++ M +G + YN +I+ + + D L ++K + ++ + V + T ++
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 558
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ +GR +A++ + + K + N L+ + G QA F M + P+
Sbjct: 559 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 618
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
A+NS +I+ F E+
Sbjct: 619 LLALNS--------------------------------------------LINAFGEDRR 634
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR 442
+EA + + + + PDV T+ TL+ A +++++ V+ M+ +G +
Sbjct: 635 DAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 155/346 (44%), Gaps = 11/346 (3%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
+ G++ A + + + P V ++ +A+ A +LF + + PN+
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLF-VHMVKFGVDPNL 339
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
YN +I+ HC G + A+ L + + P TY L G ++ EA L +
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEM-ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ 398
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
+M N+ S YN+LI G+ + N+++A +L E+ + + + +T ++ + N
Sbjct: 399 KMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVR 458
Query: 276 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 335
K AM Y + + VT L++ K +A L+ ML+ P N
Sbjct: 459 DIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP-----N 513
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
TF +V+ + G+ A+ ++ ++N + + G+ +I C+NG + A
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQ----ENNQQRSCWNHVGFTCLIEGLCQNGYILRAS 569
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
F ++ S ++PD+ ++ +++ +++ +RI D + + M+ G+
Sbjct: 570 RFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 178/453 (39%), Gaps = 75/453 (16%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+Q +AG A SV + +S T N ++AA RA EA + T+
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM-TKKG 381
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
++PN ++Y VI+ + G+ D AL+L+ + + A P+ TY + R E
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLF-YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM 440
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ +L +M + G + +N +++ G N +F E+K D T +
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ G + +A Y + F T N LL L + G W + ++ +
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGD----WRSGENVISDMKSKG 556
Query: 331 FQAVNSDTFNIMVNECFNLG-----------KFHEA-------------LATFRKAGTKS 366
F+ + ++++M+ +C+ G + E LA F+
Sbjct: 557 FKPTET-SYSLML-QCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAG 614
Query: 367 NSKAFAM--------DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLID 418
+ +AF + D+ +N+++S F N + +AE + E + LSPD+ T+ +L+D
Sbjct: 615 SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 419 AYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKP 478
Y ++ + IL + + KP
Sbjct: 675 MY-----------------------------------VRRGECWKAEEILKTLEKSQLKP 699
Query: 479 DPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
D Y VI+G C +GL+ +++ +L ++ G+
Sbjct: 700 DLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 153/380 (40%), Gaps = 50/380 (13%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
PT+ T N I+ + R I + + + + V++ EG + A E
Sbjct: 243 PTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKE 302
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+ + + + P VTY L + F AG EAL +L+EM ADS+ YN L++ +
Sbjct: 303 FFAEL-KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ G +A + + + ++ ++ + + T ++ + G++ EA+ + S+ ++ P
Sbjct: 362 VRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM--KEAGCVP 419
Query: 297 VTC--NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 354
TC N +L +L K + + + M N P N T+N M+ C N
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP-----NRATWNTMLALCGN------ 468
Query: 355 ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
G + ++R +F E+ S PD T
Sbjct: 469 ---------------------KGMDKFVNR------------VFREMKSCGFEPDRDTFN 495
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
TLI AY + DA K++ M AG N + + L + +++S M +
Sbjct: 496 TLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK 555
Query: 475 DPKPDPTCYEVVIRGLCAKG 494
KP T Y ++++ AKG
Sbjct: 556 GFKPTETSYSLMLQCY-AKG 574
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 130/318 (40%), Gaps = 50/318 (15%)
Query: 194 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG-NLDKANELFDEL 252
Y + + G+ +A+DL M G + YN ++ F ++G + K + DE+
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 253 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 312
+ + L +D +T + G +EA + + L ++ VT N LL+V K G
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 313 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 372
T+A ++ +M +N P
Sbjct: 333 TEALSVLKEMEENSCPA------------------------------------------- 349
Query: 373 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKV 432
D YN +++ + G EA + E + K + P+ T+ T+IDAY K + D+ALK+
Sbjct: 350 -DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 433 FHRMVDAGLRVVTNFC--NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
F+ M +AG V N C N V L K + + +L M P+ + ++ L
Sbjct: 409 FYSMKEAG--CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-AL 465
Query: 491 CAKGLLDKSLELLYQVMR 508
C +DK + +++ M+
Sbjct: 466 CGNKGMDKFVNRVFREMK 483
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 166/413 (40%), Gaps = 22/413 (5%)
Query: 131 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 190
R +Y+ A L Q ++ ++ +Y +++ + G+ + A++L+ + P P+
Sbjct: 187 RESQYSVAAKLLDKIPLQEYLL-DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP-SPT 244
Query: 191 AVTYRHLTKGFISAGR-IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 249
VTY + F GR + L +L EM +KG D + ++S G L +A E F
Sbjct: 245 LVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFF 304
Query: 250 DELKERCLVYDGVVNA-TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 308
ELK C G V ++ F G EA+ K + + VT N L+ ++
Sbjct: 305 AELKS-CGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363
Query: 309 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF---RKAGTK 365
G +A + + M PN + T+ +++ GK EAL F ++AG
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPN-----AITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418
Query: 366 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMER 425
N+ YN ++S + +E + ++ S SP+ T T++ A +
Sbjct: 419 PNT-------CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKG 470
Query: 426 IDDAL-KVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYE 484
+D + +VF M G + N + + +D + + +M T Y
Sbjct: 471 MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYN 530
Query: 485 VVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERL 537
++ L KG ++ + G T + + + + K G IER+
Sbjct: 531 ALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 179/455 (39%), Gaps = 66/455 (14%)
Query: 89 NRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQ 148
N V+ L R LD A + R S P T N II + + A+ L +
Sbjct: 144 NLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM-SL 202
Query: 149 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA--PFGPSAVTYRHLTKGFISAGR 206
S P++++YN VI D G + A+ ++ + PF + L + + R
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 207 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 266
A+++L +M +G D + YN+L++ GNL++ + + L + V T
Sbjct: 263 ---AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 267 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 326
+ ++ E + + + T +T N+L+ L K ++A F QML+
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 327 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 386
P D+ YN ++
Sbjct: 380 CLP--------------------------------------------DIVTYNTVLGAMS 395
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL----- 441
+ G++ +A L L + P + T+ ++ID K + AL+++H+M+DAG+
Sbjct: 396 KEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDI 455
Query: 442 ---RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDK 498
++ FC + + V + +L + R + Y +VI+GLC K ++
Sbjct: 456 TRRSLIYGFC--------RANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEM 507
Query: 499 SLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDE 533
++E++ ++ G ++ + + ++ G G E
Sbjct: 508 AIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSE 542
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 165/392 (42%), Gaps = 22/392 (5%)
Query: 159 NNVINTHCDEGRVDVALELY----RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLL 214
N +++ C G++ A +L RH P PS +L +G ++ +A+ +L
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARH--NQVPHFPSC---SNLVRGLARIDQLDKAMCIL 162
Query: 215 REMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNN 274
R M+ G D++ YN +I + G++ A L +++ D + T + F+
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 275 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 334
G ++A+ +K + +T VL+E++ ++ +A + + M P+
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV-- 280
Query: 335 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
T+N +VN G E + + S ++ YN ++ C + E
Sbjct: 281 ---TYNSLVNYNCRRGNLEEVASVIQHI----LSHGLELNTVTYNTLLHSLCSHEYWDEV 333
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVF 452
E + + S P V T+ LI+ K + A+ F++M++ +VT N V
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTY--NTVL 391
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG 512
+ K V D +L + P Y VI GL KGL+ K+LEL +Q++ G+
Sbjct: 392 GAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451
Query: 513 VTNSLREFVTEVFKKAGRGDEIERLLDFNTPR 544
+ R + F +A +E ++L + R
Sbjct: 452 PDDITRRSLIYGFCRANLVEEAGQVLKETSNR 483
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 46/340 (13%)
Query: 101 DAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNN 160
DA H F S T T N +I + + +A+ L + P+IV+YN
Sbjct: 189 DAMKLFDEHLRFQSCNDTK-TFNILIRGLCGVGKAEKALELLGVM-SGFGCEPDIVTYNT 246
Query: 161 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 220
+I C ++ A E+++ + + + P VTY + G+ AG++ EA LL +ML
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 221 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 280
G ++ +N L+ G+ + G + A E+ +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEI-----------------------------RGK 337
Query: 281 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 340
M S+ D VT L++ + G+ +Q + L+++M P N+ T++
Sbjct: 338 MISFGCFPD------VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP-----NAFTYS 386
Query: 341 IMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 400
I++N N + +A R+ + SK YN +I FC+ G ++EA + EE
Sbjct: 387 ILINALCNENRLLKA----RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 401 LCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
+ K PD T LI + R+ +A+ +FH+MV G
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 158/375 (42%), Gaps = 44/375 (11%)
Query: 159 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 218
N+++NT RV+ A++L+ + + T+ L +G G+ +AL+LL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK-TFNILIRGLCGVGKAEKALELLGVMS 233
Query: 219 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 278
G D + YN LI GF + L+KA+E+F ++K + VV T M
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM---------- 283
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 338
+ Y K GK +A +L D ML P + T
Sbjct: 284 --ISGY----------------------CKAGKMREASSLLDDMLRLGIYPT-----NVT 314
Query: 339 FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 398
FN++V+ K E L G + F DV + ++I +C G +S+ L+
Sbjct: 315 FNVLVD---GYAKAGEMLTAEEIRGKMISFGCFP-DVVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 399 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKN 458
EE+ ++ + P+ T+ LI+A R+ A ++ ++ + N V D K
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKA 430
Query: 459 DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLR 518
KV + I+ +M ++ KPD + ++I G C KG + +++ + ++++ G
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITV 490
Query: 519 EFVTEVFKKAGRGDE 533
+ KAG E
Sbjct: 491 SSLLSCLLKAGMAKE 505
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 122/272 (44%), Gaps = 8/272 (2%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
++ L G + A + + P + T N +I ++ N+A +F + S
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
P++V+Y ++I+ +C G++ A L ++ + P+ VT+ L G+ AG ++ A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIY-PTNVTFNVLVDGYAKAGEMLTA 331
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++ +M++ G D + + +LI G+ +G + + L++E+ R + + + +
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
N R +A + L + P N +++ K GK +A + ++M P
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP- 450
Query: 331 FQAVNSDTFNIM-VNECFNLGKFHEALATFRK 361
+ TF I+ + C G+ EA++ F K
Sbjct: 451 ----DKITFTILIIGHCMK-GRMFEAVSIFHK 477
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 46/340 (13%)
Query: 101 DAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNN 160
DA H F S T T N +I + + +A+ L + P+IV+YN
Sbjct: 189 DAMKLFDEHLRFQSCNDTK-TFNILIRGLCGVGKAEKALELLGVM-SGFGCEPDIVTYNT 246
Query: 161 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 220
+I C ++ A E+++ + + + P VTY + G+ AG++ EA LL +ML
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 221 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 280
G ++ +N L+ G+ + G + A E+ +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEI-----------------------------RGK 337
Query: 281 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 340
M S+ D VT L++ + G+ +Q + L+++M P N+ T++
Sbjct: 338 MISFGCFPD------VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP-----NAFTYS 386
Query: 341 IMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 400
I++N N + +A R+ + SK YN +I FC+ G ++EA + EE
Sbjct: 387 ILINALCNENRLLKA----RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 401 LCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
+ K PD T LI + R+ +A+ +FH+MV G
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 158/375 (42%), Gaps = 44/375 (11%)
Query: 159 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 218
N+++NT RV+ A++L+ + + T+ L +G G+ +AL+LL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK-TFNILIRGLCGVGKAEKALELLGVMS 233
Query: 219 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 278
G D + YN LI GF + L+KA+E+F ++K + VV T M
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM---------- 283
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 338
+ Y K GK +A +L D ML P + T
Sbjct: 284 --ISGY----------------------CKAGKMREASSLLDDMLRLGIYPT-----NVT 314
Query: 339 FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 398
FN++V+ K E L G + F DV + ++I +C G +S+ L+
Sbjct: 315 FNVLVD---GYAKAGEMLTAEEIRGKMISFGCFP-DVVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 399 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKN 458
EE+ ++ + P+ T+ LI+A R+ A ++ ++ + N V D K
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKA 430
Query: 459 DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLR 518
KV + I+ +M ++ KPD + ++I G C KG + +++ + ++++ G
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITV 490
Query: 519 EFVTEVFKKAGRGDE 533
+ KAG E
Sbjct: 491 SSLLSCLLKAGMAKE 505
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 122/272 (44%), Gaps = 8/272 (2%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
++ L G + A + + P + T N +I ++ N+A +F + S
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
P++V+Y ++I+ +C G++ A L ++ + P+ VT+ L G+ AG ++ A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIY-PTNVTFNVLVDGYAKAGEMLTA 331
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++ +M++ G D + + +LI G+ +G + + L++E+ R + + + +
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
N R +A + L + P N +++ K GK +A + ++M P
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP- 450
Query: 331 FQAVNSDTFNIM-VNECFNLGKFHEALATFRK 361
+ TF I+ + C G+ EA++ F K
Sbjct: 451 ----DKITFTILIIGHCMK-GRMFEAVSIFHK 477
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 154/350 (44%), Gaps = 26/350 (7%)
Query: 172 DVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML-----NKGHGADS 226
D +E++ I A PS I +G + +L R++L N G ++
Sbjct: 141 DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEV----NLSRKLLLYAKHNLGLQPNT 196
Query: 227 LVYNNLISGFLELGNLDKANELFDELKERCLVY-DGVVNATYMEWFFNNGRDKEAMDSYK 285
++N L+ + G+++ A + +E+K + Y + + +T M+ F + R KEA++ ++
Sbjct: 197 CIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFE 256
Query: 286 SLMDRQ-FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN 344
++ ++ PVT NV++ + G+ +A + D M N PN ++ ++N
Sbjct: 257 DMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVY-----NYSALMN 311
Query: 345 ECFNLGKFHEALATF---RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 401
+GK EA TF +K G K +D GY +++ FC NG EA L E+
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLK-------LDTVGYTTLMNCFCRNGETDEAMKLLGEM 364
Query: 402 CSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKV 461
+ D T+ ++ R ++AL++ + G+ + + + L N ++
Sbjct: 365 KASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGEL 424
Query: 462 IDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
LS M ER P + ++ LC G + + +L +R G+
Sbjct: 425 EKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGL 474
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 9/237 (3%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
PN ++Y+ +++ R A+EL+ +I+ P VT+ + GF AG + A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
+L M G + Y+ L++GF ++G + +A + FDE+K+ L D V T M F
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
NG EAM + + + +T NV+L L G+ +A QMLD
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL----QMLDQWGSEGVH 405
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
+N ++ I++N G+ +A+ K + + + A +N ++ R CE+G
Sbjct: 406 -LNKGSYRIILNALCCNGELEKAV----KFLSVMSERGIWPHHATWNELVVRLCESG 457
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 163/418 (38%), Gaps = 15/418 (3%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
R G + V +F +P+ NA+I A+ ++ + A F P+
Sbjct: 157 RLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQM-RSDGCKPDR 215
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
+YN +I+ C +G VD A+ L + + P+ TY L GF+ AGR+ EAL L
Sbjct: 216 FTYNILIHGVCKKGVVDEAIRLVKQMEQEGN-RPNVFTYTILIDGFLIAGRVDEALKQLE 274
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
M + + + G KA E+ E+ V + NN
Sbjct: 275 MMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNS 334
Query: 276 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 335
KE + + +R + T N + LLK + +FD + P F
Sbjct: 335 MAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNG-- 392
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
+ ++V N +F E ++ G V YN +I C+ + A
Sbjct: 393 ---YLVLVQALLNAQRFSEGDRYLKQMGVD----GLLSSVYSYNAVIDCLCKARRIENAA 445
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--VVTNFCNRVFD 453
E+ + +SP++ T T + Y + V +++ G + V+T + + +
Sbjct: 446 MFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVIT--FSLIIN 503
Query: 454 ELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
L + ++ D +M E +P+ Y ++IR C+ G D+S++L ++ G+
Sbjct: 504 CLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGL 561
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 189/491 (38%), Gaps = 54/491 (10%)
Query: 83 PRLNLHNRV-QSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIAL 141
P L+N V +L+++ LD A + +P FT N +I + + +EAI L
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 142 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 201
+ N PN+ +Y +I+ GRVD AL+ ++ P+ T R G
Sbjct: 238 VKQMEQEGN-RPNVFTYTILIDGFLIAGRVDEALKQL-EMMRVRKLNPNEATIRTFVHGI 295
Query: 202 ISAGRIVEALDLLREMLNKGH-----GADSLVY---NNLISGFLELGN-LDKANE----- 247
+A ++L + K G D+++Y NN ++ E G L K E
Sbjct: 296 FRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAK--ETGQFLRKIGERGYIP 353
Query: 248 ---LFD----------ELKERCLVYDGVVN----------ATYMEWFFNNGRDKEAMDSY 284
F+ +L E C ++DG V+ ++ N R E D Y
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG-DRY 412
Query: 285 KSLMDRQFKMTPV-TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMV 343
M ++ V + N +++ L K + A +M D PN N+ V
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 344 NECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCS 403
++ K H L G F DV ++ II+ C + +A F+E+
Sbjct: 473 RG--DVKKVHGVLEKLLVHG-------FKPDVITFSLIINCLCRAKEIKDAFDCFKEMLE 523
Query: 404 KSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVID 463
+ P+ T+ LI + D ++K+F +M + GL N K KV
Sbjct: 524 WGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKK 583
Query: 464 CAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTE 523
+L M KPD Y +I+ L G ++ E+ + R+G + + V E
Sbjct: 584 AEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEE 643
Query: 524 V-FKKAGRGDE 533
+ +K+G E
Sbjct: 644 LDLRKSGLSRE 654
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 151/356 (42%), Gaps = 18/356 (5%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V + ++GD + A + P +FT N +I+ + + EA+++ +S
Sbjct: 210 VHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSV-QDRMERSG 268
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ PNIV+YN+ I+ EGR+ A L+R I + VTY L G+ I EA
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREI--KDDVTANHVTYTTLIDGYCRMNDIDEA 326
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L L M ++G + YN+++ E G + +AN L E+ + + D + T +
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
+ A+ K +++ K+ + L+ K + A M++ P
Sbjct: 387 YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPG 446
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
+ T++ +V+ +N K E L F K G DVA Y +I R C+
Sbjct: 447 YA-----TYSWLVDGFYNQNKQDEITKLLEEFEKRG-------LCADVALYRGLIRRICK 494
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRV 443
+ A+ LFE + K L D T+ AY + ++ +A +F M + L V
Sbjct: 495 LEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMV 550
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 145/329 (44%), Gaps = 49/329 (14%)
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
+ ++M+ G A+ VYN L+ + G+ +KA +L E++E+ + D T + +
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
EA+ S + M+R + P VT N + + G+ +A LF ++ D+ T
Sbjct: 250 KKSMHFEAL-SVQDRMERS-GVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTA-- 305
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
N T+ +++ + EAL + S+ F+ V YN+I+ + CE+G
Sbjct: 306 ----NHVTYTTLIDGYCRMNDIDEAL----RLREVMESRGFSPGVVTYNSILRKLCEDGR 357
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
+ EA L E+ K + PD T TLI+AY K+E + A+KV +M+++GL
Sbjct: 358 IREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL--------- 408
Query: 451 VFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
K D Y+ +I G C L+ + E L+ ++ G
Sbjct: 409 --------------------------KLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 511 VGVTNSLREFVTEVFKKAGRGDEIERLLD 539
+ ++ + F + DEI +LL+
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLE 471
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/543 (20%), Positives = 212/543 (39%), Gaps = 105/543 (19%)
Query: 66 RDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTC--- 122
++ N P+ D + ++ R ++ + S I + + F R T +
Sbjct: 338 KNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRV 397
Query: 123 --NAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
N A+ + + EAI LF T I P++++Y +I C +G+ A +L
Sbjct: 398 CYNVAFDALGKLGKVEEAIELFREM-TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIE 456
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
+ T P V Y L G + G EA + L+ M N+G + +N +I G ++ G
Sbjct: 457 MDGTGK-TPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAG 515
Query: 241 NLDKANELFDELKER----------------CL--VYDGVV-------NATYMEWFFNNG 275
LDKA ++ L+ + CL ++ + + Y F +
Sbjct: 516 ELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLC 575
Query: 276 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA----------LFDQMLDN 325
+K+ + + L+DR +K+ + +GK AW F+ ++
Sbjct: 576 AEKDYISKAQDLLDRMWKLGVEPEKSM------YGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR----------------------KAG 363
P+ T+ IM+N L + +A A F +
Sbjct: 630 KIVPDLF-----TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELD 684
Query: 364 TKSNSKAFAM--DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI---- 417
K +AF + DV Y +I+R+C L + LF+++ + + PDV T+ L+
Sbjct: 685 MKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKP 744
Query: 418 --DAYMKMERIDDALKVFHR--MVDAGLRV-VTNFCNRVFDELIKN---------DKVID 463
+ +M+ D VF+ ++D ++ R+FD++I++ +I
Sbjct: 745 ERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Query: 464 CA----------HILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGV 513
C I +M E KPD Y +I G C G + K+++L+ +++ G+
Sbjct: 805 CCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Query: 514 TNS 516
T +
Sbjct: 865 TKA 867
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 182/475 (38%), Gaps = 55/475 (11%)
Query: 64 PSRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCN 123
P RD N L D + + R V+ L ++ A SV P V+ +
Sbjct: 277 PLRDANI--LVDKSDLGIAYR----KVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYS 330
Query: 124 AIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIA 183
AII + +A+ +F+ + + N V ++++ +C G A +L++
Sbjct: 331 AIIEGHRKNMNIPKAVDVFNKMLKKRKRI-NCVIVSSILQCYCQMGNFSEAYDLFKEFRE 389
Query: 184 TAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLD 243
T V Y G++ EA++L REM KG D + Y LI G G
Sbjct: 390 T-NISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCS 448
Query: 244 KANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLL 303
A +L E+ D V+ NG +EA ++ K + +R K T VT N+++
Sbjct: 449 DAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVI 508
Query: 304 EVLLKHGKKTQAWALFDQM--------------------LDNHTPPNF--------QAVN 335
E L+ G+ +A A ++ + LD H F ++V
Sbjct: 509 EGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLD-HAFERFIRLEFPLPKSVY 567
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
F + E + K + L K G + + Y +I +C + +A
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEK-------SMYGKLIGAWCRVNNVRKAR 620
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--VVTNFCNRVFD 453
FE L +K + PD+ T+ +I+ Y ++ A +F M ++ VVT +
Sbjct: 621 EFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT------YS 674
Query: 454 ELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
L+ +D +D +M D PD Y ++I C L K L + R
Sbjct: 675 VLLNSDPELDMKR---EMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKR 726
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 18/301 (5%)
Query: 156 VSYNNVINTHCDEGRVDVA---LELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
V Y N I C D+A L+ R + YR + +G RI +A
Sbjct: 253 VFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAES 312
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
++ +M G D VY+ +I G + N+ KA ++F+++ ++ + V+ ++ ++ +
Sbjct: 313 VVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYC 372
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
G EA D +K + + V NV + L K GK +A LF +M P+
Sbjct: 373 QMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPD-- 430
Query: 333 AVNSDTFNIMVNECFNLGKFHEAL-ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 391
+N T ++ C GK +A GT D+ YN + NGL
Sbjct: 431 VINYTT---LIGGCCLQGKCSDAFDLMIEMDGTGKTP-----DIVIYNVLAGGLATNGLA 482
Query: 392 SEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF----HRMVDAGLRVVTNF 447
EA + + ++ + P TH +I+ + +D A + H+ + +V F
Sbjct: 483 QEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGF 542
Query: 448 C 448
C
Sbjct: 543 C 543
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/453 (19%), Positives = 172/453 (37%), Gaps = 58/453 (12%)
Query: 93 SLIRAGDLDAASSV-----ARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFT 147
L+R GD SV A S + A++ A ++EAI +F +
Sbjct: 115 ELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAYY 174
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY------------- 194
P+I + N +I+ GR D+ + + I A TY
Sbjct: 175 SLGRAPDIKALNFLISRMIASGRSDMVVGFFWE-IERLGLDADAHTYVLVVQALWRNDDK 233
Query: 195 ----RHLTKGFISAGR--------IVEAL------DLLREMLNKGHGADSLV-------- 228
+ L++ IS R +E L D+ +L A+ LV
Sbjct: 234 EELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIA 293
Query: 229 YNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM 288
Y ++ G ++ A + ++++ + D V + +E N +A+D + ++
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKML 353
Query: 289 DRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFN 348
++ ++ V + +L+ + G ++A+ LF + + + +++ +N+ +
Sbjct: 354 KKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNI-----SLDRVCYNVAFDALGK 408
Query: 349 LGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 408
LGK EA+ FR+ K A DV Y +I C G S+A L E+ +P
Sbjct: 409 LGKVEEAIELFREM----TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTP 464
Query: 409 DVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHIL 468
D+ + L +A + M + G++ N V + LI ++
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFY 524
Query: 469 SKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLE 501
+ + + D + +++G CA G LD + E
Sbjct: 525 ESLEHKSRENDAS----MVKGFCAAGCLDHAFE 553
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 379 NNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD 438
++I+ +C+ G SEA LF+E ++S D + DA K+ ++++A+++F M
Sbjct: 365 SSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTG 424
Query: 439 AGLR-VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLD 497
G+ V N+ + ++ K D ++ +M PD Y V+ GL GL
Sbjct: 425 KGIAPDVINYTTLIGGCCLQG-KCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQ 483
Query: 498 KSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIE 535
++ E L + GV T V E AG D+ E
Sbjct: 484 EAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAE 521
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 182/438 (41%), Gaps = 13/438 (2%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P +I+ + R ++ + +F +Q + ++ SY +IN + GR + +L
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQG-VSRSVFSYTALINAYGRNGRYETSL 196
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA-LDLLREMLNKGHGADSLVYNNLIS 234
EL + PS +TY + G E L L EM ++G D + YN L+S
Sbjct: 197 ELLDR-MKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 255
Query: 235 GFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 294
G D+A +F + + +V D + +E F R ++ D +
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 295 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 354
+ NVLLE K G +A +F QM P N++T+++++N G++ +
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP-----NANTYSVLLNLFGQSGRYDD 370
Query: 355 ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
F + + SN+ D A YN +I F E G E TLF ++ +++ PD+ T+
Sbjct: 371 VRQLFLEMKS-SNTDP---DAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE 426
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
+I A K +DA K+ M + + V + + + + M E
Sbjct: 427 GIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEV 486
Query: 475 DPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDE- 533
P + ++ GL+ +S +L +++ G+ E +K+ G+ +E
Sbjct: 487 GSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Query: 534 IERLLDFNTPRYRPPQLT 551
++ +D R P + T
Sbjct: 547 VKTYVDMEKSRCDPDERT 564
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 171/427 (40%), Gaps = 18/427 (4%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P++ T N +I A R E + I P+IV+YN +++ G D A
Sbjct: 209 PSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEM 268
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
++R + P TY HL + F R+ + DLL EM + G D YN L+ +
Sbjct: 269 VFR-TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAY 327
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ G++ +A +F +++ + + + F +GR + + +
Sbjct: 328 AKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDA 387
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
T N+L+EV + G + LF M++ + P+ + T+ ++ C G HE
Sbjct: 388 ATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME-----TYEGIIFAC-GKGGLHEDA 441
Query: 357 ATFRKAGTKSN----SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 412
+ T ++ SKA Y +I F + L EA F + +P + T
Sbjct: 442 RKILQYMTANDIVPSSKA-------YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 413 HRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMG 472
+L+ ++ + + ++ + R+VD+G+ + N + + K + M
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 473 ERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGD 532
+ PD E V+ L+D+ E ++ + + + V+ K R D
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWD 614
Query: 533 EIERLLD 539
++ LL+
Sbjct: 615 DVNELLE 621
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 169/405 (41%), Gaps = 30/405 (7%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P + + N ++ A ++ EA+ +FH + PN +Y+ ++N GR D +
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQM-QAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L+ + ++ P A TY L + F G E + L +M+ + D Y +I
Sbjct: 374 LFLEM-KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 237 LELGNLDKANELFDELKERCLV-----YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ 291
+ G + A ++ + +V Y GV+ A F +EA+ ++ ++ +
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEA-----FGQAALYEEALVAFNTMHEVG 487
Query: 292 FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 351
+ T + LL + G ++ A+ +++D+ P N DTFN + GK
Sbjct: 488 SNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRN-----RDTFNAQIEAYKQGGK 542
Query: 352 FHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVP 411
F EA+ T+ KS D ++S + L+ E FEE+ + + P +
Sbjct: 543 FEEAVKTYVDM-EKSRCDP---DERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIM 598
Query: 412 THRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVID-----CAH 466
+ ++ Y K ER DD ++ M+ V+N ++V ++IK D D +
Sbjct: 599 CYCMMLAVYGKTERWDDVNELLEEMLS---NRVSNI-HQVIGQMIKGDYDDDSNWQIVEY 654
Query: 467 ILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+L K+ Y ++ L G +++ +L + + G+
Sbjct: 655 VLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGL 699
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 149/336 (44%), Gaps = 24/336 (7%)
Query: 113 SSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD 172
S P +++ N +++ ++ R+ EA + H + +VP I +YN +++ C G D
Sbjct: 112 SGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTD 171
Query: 173 VALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNL 232
A+EL++H+ + P +TY L G + R+ ++RE+ G+ +++ Y +
Sbjct: 172 NAIELFKHL--KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTM 229
Query: 233 ISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 292
+ + + ++K +LF ++K+ +DG N + GR +EA + L+
Sbjct: 230 LKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGT 289
Query: 293 K-MTPVTCNVLLEVLLKHGKKTQAWALFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLG 350
+ V+ N LL + K G L +++ + P ++ T I+VN N+G
Sbjct: 290 RSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDY------THTIIVNGLLNIG 343
Query: 351 KFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 407
A LA + G + + V N +I C+ G + A LF + +
Sbjct: 344 NTGGAEKHLACIGEMGMQPS-------VVTCNCLIDGLCKAGHVDRAMRLFASMEVR--- 393
Query: 408 PDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRV 443
D T+ +++ K R+ A K+ + G+++
Sbjct: 394 -DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKI 428
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 185/448 (41%), Gaps = 40/448 (8%)
Query: 87 LHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
L+ V SL + +L+ A ++ P V T N +I R +EA A+
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM- 74
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 206
++ I P++ +YN++I+ ++ L+L+ ++ + P +Y L + GR
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSG-LSPDMWSYNTLMSCYFKLGR 133
Query: 207 IVEALDLLREMLNKGH---GADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 263
EA +L E ++ G D+ YN L+ + G+ D A ELF LK R V
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDT--YNILLDALCKSGHTDNAIELFKHLKSR-------V 184
Query: 264 NATYMEW-FFNNGRDKEAMDSYKSLMDRQFKMT-----PVTCNVLLEVLLKHGKKTQAWA 317
M + NG K M R+ K + VT +L++ K + +
Sbjct: 185 KPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQ 244
Query: 318 LFDQML-DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAM 373
LF +M + +T F +V+ G+ EA + ++GT+S
Sbjct: 245 LFLKMKKEGYTFDGFANCA------VVSALIKTGRAEEAYECMHELVRSGTRSQ------ 292
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
D+ YN +++ + ++G L + L EE+ K L PD TH +++ + + A K
Sbjct: 293 DIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Query: 434 HRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAK 493
+ + G++ CN + D L K V + + M RD Y V+ LC
Sbjct: 353 ACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFT----YTSVVHNLCKD 408
Query: 494 GLLDKSLELLYQVMRYGVGVTNSLREFV 521
G L + +LL G+ + +S R V
Sbjct: 409 GRLVCASKLLLSCYNKGMKIPSSARRAV 436
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 142/323 (43%), Gaps = 52/323 (16%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P V T +++I + ++ R +A H ++ I PN+++++ +I+ + G++
Sbjct: 81 PNVVTYSSLITGLCKSGRLADAERRLHEMDSKK-INPNVITFSALIDAYAKRGKLSKVDS 139
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+Y+ +I + P+ TY L G R+ EA+ +L M++KG + + Y+ L +GF
Sbjct: 140 VYKMMIQMS-IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ +D +L D++ +R GV T
Sbjct: 199 FKSSRVDDGIKLLDDMPQR-----GVAANT------------------------------ 223
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
V+CN L++ + GK A +F M N PN + ++NI++ F G+ +AL
Sbjct: 224 VSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIR-----SYNIVLAGLFANGEVEKAL 278
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
+ F N +D+ Y +I C+ ++ EA LF +L K + PD + +
Sbjct: 279 SRFEHMQKTRND----LDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 334
Query: 417 I----DAYMKMERIDDALKVFHR 435
I A M+ E DAL F++
Sbjct: 335 IAELNRAGMRTEA--DALNRFYQ 355
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 130/282 (46%), Gaps = 9/282 (3%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L ++G L A P V T +A+I A + + ++ +++ Q +
Sbjct: 90 ITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI-QMS 148
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I PN+ +Y+++I C RVD A+++ +I+ P+ VTY L GF + R+ +
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC-TPNVVTYSTLANGFFKSSRVDDG 207
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ LL +M +G A+++ N LI G+ + G +D A +F + L+ + +
Sbjct: 208 IKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAG 267
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F NG ++A+ ++ + + + +T +++ + K +A+ LF ++ P+
Sbjct: 268 LFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPD 327
Query: 331 FQAVNSDTFNIMVNECFNLGKFHE--ALATFRKAGTKSNSKA 370
F+A + IM+ E G E AL F + + N A
Sbjct: 328 FKA-----YTIMIAELNRAGMRTEADALNRFYQKHVRQNESA 364
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 125/285 (43%), Gaps = 9/285 (3%)
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
+M+ G D + ++L++GF ++ A + ++++ + D VV+ ++ N
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 276 RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 335
A++ K + DR VT + L+ L K G+ A +M PN
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI--- 119
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
TF+ +++ GK + + ++ S +V Y+++I C + + EA
Sbjct: 120 --TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDP----NVFTYSSLIYGLCMHNRVDEAI 173
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDEL 455
+ + + SK +P+V T+ TL + + K R+DD +K+ M G+ T CN +
Sbjct: 174 KMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233
Query: 456 IKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSL 500
+ K+ + M P+ Y +V+ GL A G ++K+L
Sbjct: 234 FQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKAL 278
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 134/318 (42%), Gaps = 9/318 (2%)
Query: 189 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 248
P VT L GF + I +A+ + +M G D +V LI + + A E+
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 249 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 308
+K+R + + V ++ + +GR +A + ++ +T + L++ K
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 309 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 368
GK ++ +++ M+ PN +S + + C + + EA+ K S
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGL----CMH-NRVDEAI----KMLDLMIS 181
Query: 369 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDD 428
K +V Y+ + + F ++ + + L +++ + ++ + + TLI Y + +ID
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Query: 429 ALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIR 488
AL VF M GL N V L N +V M + D Y ++I
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 301
Query: 489 GLCAKGLLDKSLELLYQV 506
G+C ++ ++ +L Y++
Sbjct: 302 GMCKACMVKEAYDLFYKL 319
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 141/306 (46%), Gaps = 20/306 (6%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
PN++SY ++ ++ G+ + A ++R + ++ P PSA+TY+ + K F+ + EA +
Sbjct: 172 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGP-EPSAITYQIILKTFVEGDKFKEAEE 230
Query: 213 LLREMLNKGHGA---DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV--VNATY 267
+ +L++ D +Y+ +I + + GN +KA ++F +V GV TY
Sbjct: 231 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFS-----SMVGKGVPQSTVTY 285
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
KE Y + + V+ +L++ + ++ +A ++F++MLD
Sbjct: 286 NSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
P +A +NI+++ G +A F+ + + F D+ Y ++S +
Sbjct: 346 RPTHKA-----YNILLDAFAISGMVEQAKTVFK---SMRRDRIFP-DLWSYTTMLSAYVN 396
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNF 447
+ AE F+ + P++ T+ TLI Y K ++ ++V+ +M +G++
Sbjct: 397 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTI 456
Query: 448 CNRVFD 453
+ D
Sbjct: 457 LTTIMD 462
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 107/256 (41%), Gaps = 9/256 (3%)
Query: 232 LISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ 291
LI+ + +LGN + A + L + + + ME + G+ A ++ +
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 292 FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 351
+ + +T ++L+ ++ K +A +F+ +LD P + +++M+ G
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP--LKPDQKMYHMMIYMYKKAGN 262
Query: 352 FHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVP 411
+ +A RK + K YN+++S E +++++ + PDV
Sbjct: 263 YEKA----RKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVV 315
Query: 412 THRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKM 471
++ LI AY + R ++AL VF M+DAG+R N + D + V + M
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 472 GERDPKPDPTCYEVVI 487
PD Y ++
Sbjct: 376 RRDRIFPDLWSYTTML 391
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 158/410 (38%), Gaps = 62/410 (15%)
Query: 77 TSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYN 136
T G +NL+ +V G + A V+R + + T + +I + K +
Sbjct: 483 TVVTYGCLINLYTKV------GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 137 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALEL------YRHIIATAPFGP- 189
A A+F + + P+++ YNN+I+ C G +D A++ RH T F P
Sbjct: 537 NAFAVFEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPI 595
Query: 190 ---------------------------SAVTYRHLTKGFISAGRIVEALDLLREMLNKGH 222
+ T+ L G + ++ +A+++L EM G
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV 655
Query: 223 GADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMD 282
A+ Y ++ G+ +G+ KA E F L+ L D ++ +GR + A+
Sbjct: 656 SANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 283 SYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIM 342
K + R N+L++ + G +A L QM P+ T+
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIH-----TYTSF 770
Query: 343 VNECFNLGKFHEALATFRKA---GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
++ C G + A T + G K N K Y +I + L +A + +E
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKT-------YTTLIKGWARASLPEKALSCYE 823
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDA------LKVFHRMVDAGLRV 443
E+ + + PD + L+ + + I +A + + MV+AGL V
Sbjct: 824 EMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIV 873
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 159/384 (41%), Gaps = 18/384 (4%)
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I P Y ++I+ + +D AL R + S VTY + GF AG EA
Sbjct: 340 ITPTSRIYTSLIHAYAVGRDMDEALSCVRKM-KEEGIEMSLVTYSVIVGGFSKAGH-AEA 397
Query: 211 LDLLREMLNKGHGA-DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 269
D + + H ++ +Y +I + N+++A L E++E + + T M+
Sbjct: 398 ADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMD 457
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
+ +K+ + +K L + F T VT L+ + K GK ++A + M +
Sbjct: 458 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKSNSKAFAMDVAGYNNIISRFC 386
N + T+++M+N L + A A F K G K DV YNNIIS FC
Sbjct: 518 NLK-----TYSMMINGFVKLKDWANAFAVFEDMVKEGMKP-------DVILYNNIISAFC 565
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTN 446
G + A +E+ P T +I Y K + +L+VF M G +
Sbjct: 566 GMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVH 625
Query: 447 FCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
N + + L++ ++ IL +M + Y +++G + G K+ E ++
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 507 MRYGVGVTNSLREFVTEVFKKAGR 530
G+ V E + + K+GR
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGR 709
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 162/371 (43%), Gaps = 20/371 (5%)
Query: 146 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 205
+ P +V+Y +IN + G++ ALE+ R ++ + TY + GF+
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSR-VMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 206 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 265
A + +M+ +G D ++YNN+IS F +GN+D+A + E+++ +
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK---LRHRPTTR 590
Query: 266 TYM---EWFFNNGRDKEAMDSYKSLMDRQFKMTPV--TCNVLLEVLLKHGKKTQAWALFD 320
T+M + +G + +++ + M R+ P T N L+ L++ + +A + D
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFD--MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILD 648
Query: 321 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN 380
+M T A N T+ ++ ++G +A F T+ ++ +D+ Y
Sbjct: 649 EM----TLAGVSA-NEHTYTKIMQGYASVGDTGKAFEYF----TRLQNEGLDVDIFTYEA 699
Query: 381 IISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
++ C++G + A + +E+ ++++ + + LID + + + +A + +M G
Sbjct: 700 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 759
Query: 441 LRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSL 500
++ + K + + +M KP+ Y +I+G L +K+L
Sbjct: 760 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 819
Query: 501 ELLYQVMRYGV 511
++ G+
Sbjct: 820 SCYEEMKAMGI 830
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 141/324 (43%), Gaps = 20/324 (6%)
Query: 125 IIAAMYRAKRYNEAIALFHFFFTQSNIV--PNIVSYNNVINTHC-DEGRVDVALELYRHI 181
++A + + N A F F+ I P + S N +I C ++G VD L+++ +
Sbjct: 127 VLAILVEENQLNLA---FKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEM 183
Query: 182 IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGN 241
P + TY L G GRI EA L EM+ K + Y +LI+G N
Sbjct: 184 -PKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 242 LDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNV 301
+D+A +E+K + + + ++ M+ +GR +AM+ ++ +M R + VT
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 302 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT--FNIMVNECFNLGKFHEA---L 356
L+ L K K +A L D+M N Q + D + +++ + KF EA L
Sbjct: 303 LITGLCKEQKIQEAVELLDRM-------NLQGLKPDAGLYGKVISGFCAISKFREAANFL 355
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
G N + + V N ++ C N S A TL+ + S+ +S +V T +L
Sbjct: 356 DEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYLSMRSRGISVEVETLESL 414
Query: 417 IDAYMKMERIDDALKVFHRMVDAG 440
+ K A+++ +V G
Sbjct: 415 VKCLCKKGEFQKAVQLVDEIVTDG 438
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 302 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR- 360
+L +L++ + A+ + M + PP ++N ++ C N G L F
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNV----LIKALCRNDGTVDAGLKIFLE 182
Query: 361 --KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLID 418
K G +S Y +IS C G + EA+ LF E+ K +P V T+ +LI+
Sbjct: 183 MPKRGCDPDSYT-------YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 235
Query: 419 AYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKP 478
+ +D+A++ M G+ + + D L K+ + + + M R +P
Sbjct: 236 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 295
Query: 479 DPTCYEVVIRGLCAKGLLDKSLELL 503
+ Y +I GLC + + +++ELL
Sbjct: 296 NMVTYTTLITGLCKEQKIQEAVELL 320
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 17/249 (6%)
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
T L+ L + G+ +A LF +M++ P T+ ++N EA+
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV-----TYTSLINGLCGSKNVDEAMR 248
Query: 358 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
+ SK +V Y++++ C++G +A LFE + ++ P++ T+ TLI
Sbjct: 249 YLEEM----KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 418 DAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPK 477
K ++I +A+++ RM GL+ +V K + A+ L +M
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT 364
Query: 478 PDPTCYEV-------VIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGR 530
P+ + + V+RGLCA ++ L + G+ V E + + K G
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGE 423
Query: 531 GDEIERLLD 539
+ +L+D
Sbjct: 424 FQKAVQLVD 432
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 176/386 (45%), Gaps = 16/386 (4%)
Query: 157 SYNNVINTHCDEGRVDVALELYRHIIATA-PFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
++N +I+ + GR++ A L+ ++ + P VT+ + + G + EA LL+
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPI--DTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
+M KG D+ YN L+S + G+++ A E + ++++ L D V + +
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 276 RDKEAMDSYKSLMDR-QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM-LDNHTPPNFQA 333
E +++ + MDR ++ + V++++ + G QA ALF++ LD
Sbjct: 425 MVAE-VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDC-------V 476
Query: 334 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 393
++S T +++ G + EA F K N DV YN +I + + L +
Sbjct: 477 LSSTTLAAVIDVYAEKGLWVEAETVFY---GKRNMSGQRNDVLEYNVMIKAYGKAKLHEK 533
Query: 394 AETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFD 453
A +LF+ + ++ PD T+ +L ++ +D+A ++ M+D+G + +
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 454 ELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGV 513
++ + D + M + KP+ Y +I G G+++++++ + +GV
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 514 TNSLREFVTEVFKKAGRGDEIERLLD 539
+ + + + + K G +E R+ D
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYD 679
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 142/320 (44%), Gaps = 17/320 (5%)
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
T A+I + EA +F+ S +++ YN +I + + AL L++
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
+ + P TY L + + EA +L EML+ G Y +I+ ++ LG
Sbjct: 541 MKNQGTW-PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLG 599
Query: 241 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 300
L A +L++ +++ + + VV + + F +G +EA+ ++ + + + +
Sbjct: 600 LLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLT 659
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF- 359
L++ K G +A ++D+M D+ P+ A NS M++ C +LG EA + F
Sbjct: 660 SLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNS-----MLSLCADLGIVSEAESIFN 714
Query: 360 --RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
R+ GT DV + ++ + G+L EA + EE+ L D + ++
Sbjct: 715 ALREKGT--------CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM 766
Query: 418 DAYMKMERIDDALKVFHRMV 437
Y ++ + ++FH M+
Sbjct: 767 ACYAADGQLSECCELFHEML 786
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 191/463 (41%), Gaps = 36/463 (7%)
Query: 54 NAIRPPLQHSPSRD--PNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHST 111
N I L + D P PRL + + L+ +L+ + AG L+ A+++
Sbjct: 283 NPIEKSLHFASGSDSSPRKPRLTSTFNTLI----DLYGK------AGRLNDAANLFSEML 332
Query: 112 FSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRV 171
S T N +I +EA +L + I P+ +YN +++ H D G +
Sbjct: 333 KSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM-EEKGISPDTKTYNILLSLHADAGDI 391
Query: 172 DVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNN 231
+ ALE YR I F P VT+R + + E ++ EM D
Sbjct: 392 EAALEYYRKIRKVGLF-PDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPV 450
Query: 232 LISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY--KSLMD 289
++ ++ G + +A LF+ + C V A ++ + G EA + K M
Sbjct: 451 IMQMYVNEGLVVQAKALFERFQLDC-VLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMS 509
Query: 290 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 349
Q + + NV+++ K +A +LF M + T P+ NS F ++ +
Sbjct: 510 GQ-RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS-LFQMLAGVDL-V 566
Query: 350 GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 409
+ LA +G K K +A +A Y + GLLS+A L+E + + P+
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRL-------GLLSDAVDLYEAMEKTGVKPN 619
Query: 410 VPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAH--- 466
+ +LI+ + + +++A++ F M + G++ +N + V LIK + C
Sbjct: 620 EVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ--SN--HIVLTSLIKAYSKVGCLEEAR 675
Query: 467 -ILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
+ KM + + PD ++ LCA + E ++ +R
Sbjct: 676 RVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAESIFNALR 717
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 168/408 (41%), Gaps = 32/408 (7%)
Query: 134 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFG--PSA 191
R+ + +F FF + + VPN++ YN V+ G+ D EL I A G P+
Sbjct: 124 RWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWD---ELRLCWIEMAHNGVLPTN 180
Query: 192 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 251
TY L + AG + EAL ++ M + H D + ++ F G D+A+ F
Sbjct: 181 NTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFF-- 238
Query: 252 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV-LLKHG 310
K C G+ +DS +PV L + L K G
Sbjct: 239 -KGWC-----------------AGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVG 280
Query: 311 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 370
+ + + P + S TFN +++ G+ ++A F ++
Sbjct: 281 ARNPIEKSLHFASGSDSSPRKPRLTS-TFNTLIDLYGKAGRLNDAANLF----SEMLKSG 335
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
+D +N +I +G LSEAE+L +++ K +SPD T+ L+ + I+ AL
Sbjct: 336 VPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAAL 395
Query: 431 KVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
+ + ++ GL T V L + V + ++++M + D V+++
Sbjct: 396 EYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY 455
Query: 491 CAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLL 538
+GL+ ++ + L++ + ++++ V +V+ + G E E +
Sbjct: 456 VNEGLVVQA-KALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVF 502
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 166/413 (40%), Gaps = 38/413 (9%)
Query: 88 HNRVQSLIRAGDL-DAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
+N + ++ DL D A + S +P T A+IA+ R ++A+ L+
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM- 611
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 206
++ + PN V Y ++IN + G V+ A++ +R ++ + + L K + G
Sbjct: 612 EKTGVKPNEVVYGSLINGFAESGMVEEAIQYFR-MMEEHGVQSNHIVLTSLIKAYSKVGC 670
Query: 207 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 266
+ EA + +M + G D N+++S +LG + +A +F+ L+E+ D + AT
Sbjct: 671 LEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFAT 729
Query: 267 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 326
M + G EA++ + + + + N ++ G+ ++ LF +ML
Sbjct: 730 MMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVER 789
Query: 327 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN----------------SKA 370
++ TF + G EA++ + A ++ A
Sbjct: 790 KL----LLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYA 845
Query: 371 FAMDVA-------------GYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
+A++ YN +I + +G + A + + K L PD+ T L+
Sbjct: 846 YALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
Query: 418 DAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSK 470
Y K ++ +V R+ L + V D + ++ D A ++ K
Sbjct: 906 GIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQ-DLADVVKK 957
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 147/378 (38%), Gaps = 58/378 (15%)
Query: 72 RLPDSTSALVGPRLNLHNR-----------VQSLIRAGDLDAASSVARHSTFSSTRPTVF 120
RL ++ LV R+ L R + RAG L+ A V +P V
Sbjct: 385 RLKEAEELLV--RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
T N I+ M R N A+ F + + N+V+Y +I+ C V+ A+ Y
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFF-MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
++ A P A Y L G R +A+ ++ ++ G D L YN LI F +
Sbjct: 502 MLE-AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 241 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 300
N +K E+ ++++ G+ K +T N
Sbjct: 561 NAEKVYEMLTDMEK-------------------EGK----------------KPDSITYN 585
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 360
L+ KH + +QM ++ P T+ +++ ++G+ EAL F+
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTVT-----TYGAVIDAYCSVGELDEALKLFK 640
Query: 361 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY 420
G S + YN +I+ F + G +A +L EE+ K + P+V T+ L
Sbjct: 641 DMGLHSKVNP---NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 421 MKMERIDDALKVFHRMVD 438
+ + + LK+ MV+
Sbjct: 698 NEKTQGETLLKLMDEMVE 715
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 20/329 (6%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVS-----YNNVINTHCDEGR 170
RP V T +I + +++R +EA+ +F + N++ +N +I+ C GR
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 171 VDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYN 230
+ A EL + P+AVTY L G+ AG++ A +++ M + + N
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 231 NLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 290
++ G L+ A F ++++ + + V T + + ++AM Y+ +++
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 291 QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN---ECF 347
L+ L + + A + +++ + + A +N+++ +
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA-----YNMLIGLFCDKN 560
Query: 348 NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 407
N K +E L K G K +S YN +IS F ++ E + E++ L
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDS-------ITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 408 PDVPTHRTLIDAYMKMERIDDALKVFHRM 436
P V T+ +IDAY + +D+ALK+F M
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 177/431 (41%), Gaps = 31/431 (7%)
Query: 123 NAIIAAMYR---AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYR 179
NA+++ + R R N+ + + I P++V+ +INT C RVD ALE++
Sbjct: 298 NALLSCLGRNMDISRMNDLV----LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 180 HIIATAP-----FGPSAVTYRHLTKGFISAGRIVEALDLLREM-LNKGHGADSLVYNNLI 233
+ ++ + L G GR+ EA +LL M L + +++ YN LI
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLI 413
Query: 234 SGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK 293
G+ G L+ A E+ +KE + + V T + + A+ + + K
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 353
VT L+ +A +++ML+ P ++ + +++ + + H
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP-----DAKIYYALISGLCQVRRDH 528
Query: 354 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
+A+ K F++D+ YN +I FC+ + + ++ + PD T+
Sbjct: 529 DAIRVVEKL----KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMG- 472
TLI + K + + ++ +M + GL V D ++ + + MG
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 473 ERDPKPDPTCYEVVIRGLCAKGLLDKSL----ELLYQVMRYGVGVTNSLREFVTEVFKKA 528
P+ Y ++I G ++L E+ +++R V N+L + + E
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE----K 700
Query: 529 GRGDEIERLLD 539
+G+ + +L+D
Sbjct: 701 TQGETLLKLMD 711
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 121/298 (40%), Gaps = 39/298 (13%)
Query: 243 DKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVL 302
DK L++ KE+ + V + WF G +++ Y+ L D K + V NV+
Sbjct: 134 DKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL-DSNMKNSQVR-NVV 191
Query: 303 LEVLLKHGKKTQAWALFDQMLDNHT--PPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 360
++VLL++G A+ + D+ML + PPN + + K ++ F
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFS 251
Query: 361 KAGTKSNSKAF---------------AMDVAG-------------YNNIISRFCENGLLS 392
G NS A D+ +N ++S N +S
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM----VDAG--LRVVTN 446
L ++ + PDV T LI+ K R+D+AL+VF +M D G ++ +
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 447 FCNRVFDELIKNDKVIDCAHILSKMG-ERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
N + D L K ++ + +L +M E P+ Y +I G C G L+ + E++
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/366 (19%), Positives = 151/366 (41%), Gaps = 32/366 (8%)
Query: 189 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 248
P++V R A D+L +++ ++ +N L+S ++ + N+L
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 249 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ------FKMTPVTCNVL 302
++ E + D V + + R EA++ ++ + ++ K + N L
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTL 376
Query: 303 LEVLLKHGKKTQAWALFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 361
++ L K G+ +A L +M L+ P N+ T+N +++ GK L T ++
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEERCVP-----NAVTYNCLIDGYCRAGK----LETAKE 427
Query: 362 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYM 421
++ +V N I+ C + L+ A F ++ + + +V T+ TLI A
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 422 KMERIDDALKVFHRMVDAGLR--------VVTNFCNRVFDELIKNDKVIDCAHILSKMGE 473
+ ++ A+ + +M++AG +++ C ++ D D ++ K+ E
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ------VRRDH--DAIRVVEKLKE 539
Query: 474 RDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDE 533
D Y ++I C K +K E+L + + G + + F K +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFES 599
Query: 534 IERLLD 539
+ER+++
Sbjct: 600 VERMME 605
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 146/378 (38%), Gaps = 58/378 (15%)
Query: 72 RLPDSTSALVGPRLNLHNR-----------VQSLIRAGDLDAASSVARHSTFSSTRPTVF 120
RL ++ LV R+ L R + RAG L+ A V +P V
Sbjct: 385 RLKEAEELLV--RMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
T N I+ M R N A+ F + + N+V+Y +I+ C V+ A+ Y
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFF-MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
++ A P A Y L G R +A+ ++ ++ G D L YN LI F +
Sbjct: 502 MLE-AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 241 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 300
N +K E+ ++ +KE K +T N
Sbjct: 561 NTEKVYEMLTDM------------------------EKEGK-----------KPDSITYN 585
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 360
L+ KH + +QM ++ P T+ +++ ++G+ EAL F+
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTVT-----TYGAVIDAYCSVGELDEALKLFK 640
Query: 361 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY 420
G S + YN +I+ F + G +A +L EE+ K + P+V T+ L
Sbjct: 641 DMGLHSKVNP---NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 421 MKMERIDDALKVFHRMVD 438
+ + + LK+ MV+
Sbjct: 698 NEKTQGETLLKLMDEMVE 715
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 20/329 (6%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVS-----YNNVINTHCDEGR 170
RP V T +I + +++R +EA+ +F + N++ +N +I+ C GR
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 171 VDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYN 230
+ A EL + P+AVTY L G+ AG++ A +++ M + + N
Sbjct: 386 LKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 231 NLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 290
++ G L+ A F ++++ + + V T + + ++AM Y+ +++
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 291 QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN---ECF 347
L+ L + + A + +++ + + A +N+++ +
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA-----YNMLIGLFCDKN 560
Query: 348 NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 407
N K +E L K G K +S YN +IS F ++ E + E++ L
Sbjct: 561 NTEKVYEMLTDMEKEGKKPDS-------ITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 408 PDVPTHRTLIDAYMKMERIDDALKVFHRM 436
P V T+ +IDAY + +D+ALK+F M
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 177/431 (41%), Gaps = 31/431 (7%)
Query: 123 NAIIAAMYR---AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYR 179
NA+++ + R R N+ + + I P++V+ +INT C RVD ALE++
Sbjct: 298 NALLSCLGRNMDISRMNDLV----LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 180 HIIATAP-----FGPSAVTYRHLTKGFISAGRIVEALDLLREM-LNKGHGADSLVYNNLI 233
+ ++ + L G GR+ EA +LL M L + +++ YN LI
Sbjct: 354 KMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLI 413
Query: 234 SGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK 293
G+ G L+ A E+ +KE + + V T + + A+ + + K
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 353
VT L+ +A +++ML+ P ++ + +++ + + H
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP-----DAKIYYALISGLCQVRRDH 528
Query: 354 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
+A+ K F++D+ YN +I FC+ + + ++ + PD T+
Sbjct: 529 DAIRVVEKL----KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITY 584
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMG- 472
TLI + K + + ++ +M + GL V D ++ + + MG
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 473 ERDPKPDPTCYEVVIRGLCAKGLLDKSL----ELLYQVMRYGVGVTNSLREFVTEVFKKA 528
P+ Y ++I G ++L E+ +++R V N+L + + E
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE----K 700
Query: 529 GRGDEIERLLD 539
+G+ + +L+D
Sbjct: 701 TQGETLLKLMD 711
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 121/298 (40%), Gaps = 39/298 (13%)
Query: 243 DKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVL 302
DK L++ KE+ + V + WF G +++ Y+ L D K + V NV+
Sbjct: 134 DKLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERL-DSNMKNSQVR-NVV 191
Query: 303 LEVLLKHGKKTQAWALFDQMLDNHT--PPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 360
++VLL++G A+ + D+ML + PPN + + K ++ F
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFS 251
Query: 361 KAGTKSNSKAF---------------AMDVAG-------------YNNIISRFCENGLLS 392
G NS A D+ +N ++S N +S
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM----VDAG--LRVVTN 446
L ++ + PDV T LI+ K R+D+AL+VF +M D G ++ +
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSI 371
Query: 447 FCNRVFDELIKNDKVIDCAHILSKMG-ERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
N + D L K ++ + +L +M E P+ Y +I G C G L+ + E++
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVV 429
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/435 (18%), Positives = 180/435 (41%), Gaps = 36/435 (8%)
Query: 123 NAIIAAMYRAKRYNEAIALFHFFFTQSNIVP-NIVSYNNVINTHCDEGRVDVALELYRHI 181
N ++ + R ++A + + ++ P N ++ + V++ +GR+ ++ I
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH-EVWKGRLLTEEKIIALI 247
Query: 182 IATAPFG--PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLEL 239
+ G P++V R A D+L +++ ++ +N L+S
Sbjct: 248 SRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 240 GNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ------FK 293
++ + N+L ++ E + D V + + R EA++ ++ + ++ K
Sbjct: 308 MDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIK 367
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLGKF 352
+ N L++ L K G+ +A L +M L+ P N+ T+N +++ GK
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAP-----NAVTYNCLIDGYCRAGK- 421
Query: 353 HEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 412
L T ++ ++ +V N I+ C + L+ A F ++ + + +V T
Sbjct: 422 ---LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 413 HRTLIDAYMKMERIDDALKVFHRMVDAGLR--------VVTNFCNRVFDELIKNDKVIDC 464
+ TLI A + ++ A+ + +M++AG +++ C ++ D D
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ------VRRDH--DA 530
Query: 465 AHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEV 524
++ K+ E D Y ++I C K +K E+L + + G + +
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 525 FKKAGRGDEIERLLD 539
F K + +ER+++
Sbjct: 591 FGKHKDFESVERMME 605
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 162/389 (41%), Gaps = 34/389 (8%)
Query: 69 NAPRLPDSTSAL--------VGPRLNLHNRVQSLIRAGDLDAASSVARHSTFS-STRPTV 119
A RL D+ S V L+ +Q +++ +L+AA + R + +
Sbjct: 93 RAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRI 152
Query: 120 FTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYR 179
N ++ + + R + A +F Q P+ SY ++ C EG+++ A L
Sbjct: 153 TALNLLMKVLCQVNRSDLASQVFQEMNYQ-GCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 180 HI---IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+ I+ G V YR L AG + +A+++L ++L KG A Y+++ +G
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH 271
Query: 237 LELGN--LDKANELFDELKER----CL-VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 289
E + +++ L E R CL Y + F G+ E + ++
Sbjct: 272 WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD-----LFEEGKLVEGEEVLLAMRS 326
Query: 290 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFD-QMLDNHTPPNFQAVNSDTFNIMVNECFN 348
+ F+ TP ++ L + GK +A ++ + +M+ H P +N+++ +
Sbjct: 327 KGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTV-----GVYNVLIKGLCD 381
Query: 349 LGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 408
GK EA+ +K + + A + Y ++ C +G EA + EE+ KS P
Sbjct: 382 DGKSMEAVGYLKKMSKQVSCVA---NEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 409 DVPTHRTLIDAYMKMERIDDALKVFHRMV 437
V T+ +I M+R +A+ MV
Sbjct: 439 GVETYHMMIKGLCDMDRRYEAVMWLEEMV 467
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 162/389 (41%), Gaps = 34/389 (8%)
Query: 69 NAPRLPDSTSAL--------VGPRLNLHNRVQSLIRAGDLDAASSVARHSTFS-STRPTV 119
A RL D+ S V L+ +Q +++ +L+AA + R + +
Sbjct: 93 RAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRI 152
Query: 120 FTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYR 179
N ++ + + R + A +F Q P+ SY ++ C EG+++ A L
Sbjct: 153 TALNLLMKVLCQVNRSDLASQVFQEMNYQ-GCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 180 HI---IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+ I+ G V YR L AG + +A+++L ++L KG A Y+++ +G
Sbjct: 212 SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH 271
Query: 237 LELGN--LDKANELFDELKER----CL-VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 289
E + +++ L E R CL Y + F G+ E + ++
Sbjct: 272 WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD-----LFEEGKLVEGEEVLLAMRS 326
Query: 290 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFD-QMLDNHTPPNFQAVNSDTFNIMVNECFN 348
+ F+ TP ++ L + GK +A ++ + +M+ H P +N+++ +
Sbjct: 327 KGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTV-----GVYNVLIKGLCD 381
Query: 349 LGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 408
GK EA+ +K + + A + Y ++ C +G EA + EE+ KS P
Sbjct: 382 DGKSMEAVGYLKKMSKQVSCVA---NEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 409 DVPTHRTLIDAYMKMERIDDALKVFHRMV 437
V T+ +I M+R +A+ MV
Sbjct: 439 GVETYHMMIKGLCDMDRRYEAVMWLEEMV 467
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 141/306 (46%), Gaps = 20/306 (6%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
PN++SY ++ ++ G+ + A ++R + ++ P PSA+TY+ + K F+ + EA +
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGP-EPSAITYQIILKTFVEGDKFKEAEE 237
Query: 213 LLREMLNKGHGA---DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV--VNATY 267
+ +L++ D +Y+ +I + + GN +KA ++F +V GV TY
Sbjct: 238 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFS-----SMVGKGVPQSTVTY 292
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
KE Y + + V+ +L++ + ++ +A ++F++MLD
Sbjct: 293 NSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
P +A +NI+++ G +A F+ + + F D+ Y ++S +
Sbjct: 353 RPTHKA-----YNILLDAFAISGMVEQAKTVFK---SMRRDRIFP-DLWSYTTMLSAYVN 403
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNF 447
+ AE F+ + P++ T+ TLI Y K ++ ++V+ +M +G++
Sbjct: 404 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTI 463
Query: 448 CNRVFD 453
+ D
Sbjct: 464 LTTIMD 469
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 107/256 (41%), Gaps = 9/256 (3%)
Query: 232 LISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ 291
LI+ + +LGN + A + L + + + ME + G+ A ++ +
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 292 FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 351
+ + +T ++L+ ++ K +A +F+ +LD P + +++M+ G
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP--LKPDQKMYHMMIYMYKKAGN 269
Query: 352 FHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVP 411
+ +A RK + K YN+++S E +++++ + PDV
Sbjct: 270 YEKA----RKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVV 322
Query: 412 THRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKM 471
++ LI AY + R ++AL VF M+DAG+R N + D + V + M
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 472 GERDPKPDPTCYEVVI 487
PD Y ++
Sbjct: 383 RRDRIFPDLWSYTTML 398
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 146/378 (38%), Gaps = 58/378 (15%)
Query: 72 RLPDSTSALVGPRLNLHNR-----------VQSLIRAGDLDAASSVARHSTFSSTRPTVF 120
RL ++ LV R+ L R + RAG L+ A V +P V
Sbjct: 385 RLKEAEELLV--RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
T N I+ M R N A+ F + + N+V+Y +I+ C V+ A+ Y
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFF-MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
++ A P A Y L G R +A+ ++ ++ G D L YN LI F +
Sbjct: 502 MLE-AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 241 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 300
N +K E+ ++ +KE K +T N
Sbjct: 561 NAEKVYEMLTDM------------------------EKEGK-----------KPDSITYN 585
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 360
L+ KH + +QM ++ P T+ +++ ++G+ EAL F+
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTVT-----TYGAVIDAYCSVGELDEALKLFK 640
Query: 361 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY 420
G S + YN +I+ F + G +A +L EE+ K + P+V T+ L
Sbjct: 641 DMGLHSKVNP---NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 421 MKMERIDDALKVFHRMVD 438
+ + + LK+ MV+
Sbjct: 698 NEKTQGETLLKLMDEMVE 715
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 20/329 (6%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVS-----YNNVINTHCDEGR 170
RP V T +I + +++R +EA+ +F + N++ +N +I+ C GR
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 171 VDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYN 230
+ A EL + P+AVTY L G+ AG++ A +++ M + + N
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 231 NLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 290
++ G L+ A F ++++ + + V T + + ++AM Y+ +++
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 291 QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN---ECF 347
L+ L + + A + +++ + + A +N+++ +
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA-----YNMLIGLFCDKN 560
Query: 348 NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 407
N K +E L K G K +S YN +IS F ++ E + E++ L
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDS-------ITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 408 PDVPTHRTLIDAYMKMERIDDALKVFHRM 436
P V T+ +IDAY + +D+ALK+F M
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 166/403 (41%), Gaps = 24/403 (5%)
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAP-----FGPSAVTYRHLTKGFI 202
+ I P++V+ +INT C RVD ALE++ + ++ + L G
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 203 SAGRIVEALDLLREM-LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
GR+ EA +LL M L + +++ YN LI G+ G L+ A E+ +KE + +
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
V T + + A+ + + K VT L+ +A +++
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
ML+ P ++ + +++ + + H+A+ K F++D+ YN +
Sbjct: 502 MLEAGCSP-----DAKIYYALISGLCQVRRDHDAIRVVEKL----KEGGFSLDLLAYNML 552
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
I FC+ + + ++ + PD T+ TLI + K + + ++ +M + GL
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 442 RVVTNFCNRVFDELIKNDKVIDCAHILSKMG-ERDPKPDPTCYEVVIRGLCAKGLLDKSL 500
V D ++ + + MG P+ Y ++I G ++L
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 501 ----ELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
E+ +++R V N+L + + E +G+ + +L+D
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNE----KTQGETLLKLMD 711
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 121/298 (40%), Gaps = 39/298 (13%)
Query: 243 DKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVL 302
DK L++ KE+ + V + WF G +++ Y+ L D K + V NV+
Sbjct: 134 DKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERL-DSNMKNSQVR-NVV 191
Query: 303 LEVLLKHGKKTQAWALFDQMLDNHT--PPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 360
++VLL++G A+ + D+ML + PPN + + K ++ F
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFS 251
Query: 361 KAGTKSNSKAF---------------AMDVAG-------------YNNIISRFCENGLLS 392
G NS A D+ +N ++S N +S
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM----VDAG--LRVVTN 446
L ++ + PDV T LI+ K R+D+AL+VF +M D G ++ +
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 447 FCNRVFDELIKNDKVIDCAHILSKMG-ERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
N + D L K ++ + +L +M E P+ Y +I G C G L+ + E++
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/367 (19%), Positives = 151/367 (41%), Gaps = 32/367 (8%)
Query: 188 GPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANE 247
P++V R A D+L +++ ++ +N L+S ++ + N+
Sbjct: 256 SPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMND 315
Query: 248 LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ------FKMTPVTCNV 301
L ++ E + D V + + R EA++ ++ + ++ K + N
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 302 LLEVLLKHGKKTQAWALFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 360
L++ L K G+ +A L +M L+ P N+ T+N +++ GK L T +
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVP-----NAVTYNCLIDGYCRAGK----LETAK 426
Query: 361 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY 420
+ ++ +V N I+ C + L+ A F ++ + + +V T+ TLI A
Sbjct: 427 EVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486
Query: 421 MKMERIDDALKVFHRMVDAGLR--------VVTNFCNRVFDELIKNDKVIDCAHILSKMG 472
+ ++ A+ + +M++AG +++ C ++ D D ++ K+
Sbjct: 487 CSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ------VRRDH--DAIRVVEKLK 538
Query: 473 ERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGD 532
E D Y ++I C K +K E+L + + G + + F K +
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 533 EIERLLD 539
+ER+++
Sbjct: 599 SVERMME 605
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 7/157 (4%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P T N +I+ + K + E++ + + P + +Y VI+ +C G +D AL
Sbjct: 578 KPDSITYNTLISFFGKHKDF-ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEAL 636
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
+L++ + + P+ V Y L F G +AL L EM K + YN L
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKC 696
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
E + +L DE+ E +VN +W F
Sbjct: 697 LNEKTQGETLLKLMDEMVEH------LVNQIRSQWRF 727
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 195/477 (40%), Gaps = 30/477 (6%)
Query: 73 LPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRA 132
+ S+ V R L N LI G A +V + + RP++ + ++AAM
Sbjct: 37 VEGSSCRTVRSRTKLMN---VLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQ 93
Query: 133 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 192
K+Y +I+ QS + + +N VIN + G ++ A++ + P+
Sbjct: 94 KQYG-SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLK-MKELGLNPTTS 151
Query: 193 TYRHLTKGFISAG---RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 249
TY L KG+ AG R E LDL+ E N G + +N L+ + + +++A E+
Sbjct: 152 TYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVV 211
Query: 250 DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY--KSLMDRQFKMTPVTCNVLLEVLL 307
+++E + D V T + G A K +M + K TC +++
Sbjct: 212 KKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYC 271
Query: 308 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN---ECFNLGKFHEALATFRKAGT 364
+ G+ +M + N FN ++N E + E L ++
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVV-----FNSLINGFVEVMDRDGIDEVLTLMKECNV 326
Query: 365 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKME 424
K+ DV Y+ +++ + G + +A +F+E+ + PD + L Y++ +
Sbjct: 327 KA-------DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 425 RIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYE 484
A ++ ++ V F V N + D + +KM + P+ +E
Sbjct: 380 EPKKAEELLETLIVESRPNVVIF-TTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFE 438
Query: 485 VVIRGLCAKGLLDKSLELLYQVMRYGVGVT--NSLREFVTEVFKKAGRGDEIERLLD 539
++ G K+ E+L Q+MR G GV NS + E ++ AG DE + ++
Sbjct: 439 TLMWGYLEVKQPWKAEEVL-QMMR-GCGVKPENSTFLLLAEAWRVAGLTDESNKAIN 493
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 180/429 (41%), Gaps = 20/429 (4%)
Query: 91 VQSLIRAGDLDA-ASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQS 149
+++LI+AG L+ A + + S VF N+++ + + + + +
Sbjct: 328 IRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRG 387
Query: 150 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 209
+ PN + N + C G VD ALELYR + F P+A++Y +L + + +
Sbjct: 388 -VSPNKKTMNAALCFFCKAGFVDEALELYRSR-SEIGFAPTAMSYNYLIHTLCANESVEQ 445
Query: 210 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 269
A D+L+ +++GH ++ L + G D A EL ER L+ + +
Sbjct: 446 AYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIIS 505
Query: 270 WFFNNGRDKEAMDS----YKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
+ G+ ++A+ KS +D FKM T + + L G A L +M +
Sbjct: 506 ALCDVGKVEDALMINELFNKSGVDTSFKM--FTSLIYGSITLMRGD--IAAKLIIRMQEK 561
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
P S N++ C + F K + V YN I
Sbjct: 562 GYTPT----RSLYRNVIQCVC----EMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGA 613
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVT 445
G A +++ + ++P V ++ ++ +Y+K E+I DAL FH + + G +
Sbjct: 614 GFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKK 672
Query: 446 NFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQ 505
+ L K +K+ D H L +M +P CYEV I+ LC + D+++ L+ +
Sbjct: 673 RLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNE 732
Query: 506 VMRYGVGVT 514
+ G +T
Sbjct: 733 FRKSGRRIT 741
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 147/398 (36%), Gaps = 35/398 (8%)
Query: 111 TFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGR 170
S TR + C R ++ A FH F I+ ++ D
Sbjct: 118 VLSHTRYDILCCLKFFDWAARQPGFHHTRATFHAIF-------KILRGAKLVTLMIDFLD 170
Query: 171 VDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYN 230
V E RH + L G+ AGR AL M +G DS Y+
Sbjct: 171 RSVGFESCRHSLRLCD---------ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYH 221
Query: 231 NLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 290
L++ +E D + +FD++ R V V ++ ++ F G+ EA D ++L+
Sbjct: 222 VLLNALVEEKCFDSFDVIFDQISVRGFVC-AVTHSILVKKFCKQGKLDEAEDYLRALLPN 280
Query: 291 QFKMTPVTCN----VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD-TFNIMVNE 345
P C +L++ L K +A L D++ VN D +NI +
Sbjct: 281 D----PAGCGSGLGILVDALCSKRKFQEATKLLDEI------KLVGTVNMDRAYNIWIRA 330
Query: 346 CFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS 405
G + +K S + ++V YN+++ + + L + E+ +
Sbjct: 331 LIKAGFLNNPADFLQKI---SPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRG 387
Query: 406 LSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCA 465
+SP+ T + + K +D+AL+++ + G N + L N+ V
Sbjct: 388 VSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAY 447
Query: 466 HILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
+L +R + + LC KG D + EL+
Sbjct: 448 DVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELV 485
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/470 (19%), Positives = 188/470 (40%), Gaps = 12/470 (2%)
Query: 73 LPDSTSALVGP-RLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYR 131
+ D A + P R +N + + +G+ A V + T + P + T N +++A
Sbjct: 201 MDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKS 260
Query: 132 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT-APFGPS 190
++Y++A++ F + + P+ ++N +I G+ AL+L+ + A P
Sbjct: 261 GRQYSKALSYFELM-KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 319
Query: 191 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 250
VT+ + + G I + M+ +G + + YN L+ + G A +
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 251 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 310
++K+ ++ D V + + + + +A + + + + K VT N L++ +G
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 311 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 370
+A +F QM + PN +V + ++ C K A S+
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCT-----LLAACSRSKKKVNVDTVLSAA----QSRG 490
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
++ A YN+ I + L +A L++ + K + D T LI +M + +A+
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 550
Query: 431 KVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
M D + + + V K +V + I ++M +PD Y ++
Sbjct: 551 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Query: 491 CAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDF 540
A K+ EL ++ G+ + + F K G+ + L+D
Sbjct: 611 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDL 660
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 160/401 (39%), Gaps = 36/401 (8%)
Query: 139 IALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLT 198
+ +F + Q N YN +I H VD A L+ + P A TY L
Sbjct: 127 VNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM-QKWSCKPDAETYDALI 185
Query: 199 KGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV 258
AG+ A++L+ +ML YNNLI+ GN +A E+ ++ + +
Sbjct: 186 NAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVG 245
Query: 259 YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAW 316
D V + + + +GR SY LM + K+ P T N+++ L K G+ +QA
Sbjct: 246 PDLVTHNIVLS-AYKSGRQYSKALSYFELM-KGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 317 ALFDQMLDNHTP--PNFQAVNS---------------DTFNIMVNECF--NLGKFHEALA 357
LF+ M + P+ S F MV E N+ ++ +
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMG 363
Query: 358 TFRKAGTKSNS---------KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 408
+ G + DV Y +++ + + +A+ +F + + P
Sbjct: 364 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 423
Query: 409 DVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-VVTNFCNRVFDELIKNDKVIDCAHI 467
+V T+ LIDAY + +A+++F +M G++ V + C + ++ K ++ +
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT-LLAACSRSKKKVNVDTV 482
Query: 468 LSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
LS R + Y I L+K++ LYQ MR
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA-LYQSMR 522
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 187/458 (40%), Gaps = 30/458 (6%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSST--RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQ 148
+ L RAG + A +V +T P V + ++ + +EA+ +FH ++
Sbjct: 251 IDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSR 310
Query: 149 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHII----ATAPFGPSAVTYRHLTKGFISA 204
+ PN V+YN +I + R D E+ +I A F P A T+ L K A
Sbjct: 311 G-LKPNAVTYNTLIKGLSEAHRYD---EIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 205 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL--KERCLVYDGV 262
G + A+ + +EMLN DS Y+ LI D+A LF+EL KE L D
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426
Query: 263 --VNATY---MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA 317
+ A Y E+ NG+ K+A ++ LM R + P + L+ + GK A+
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYE 485
Query: 318 LFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAG 377
L ML P+ + T+ ++++ +G+ A T ++ S +
Sbjct: 486 LLVLMLRREFVPDLE-----TYELLIDGLLKIGEALLAHDTLQRMLRSS----YLPVATT 536
Query: 378 YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMV 437
++++++ + +E+ L + K + ++ ++ + + A + +
Sbjct: 537 FHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLY 596
Query: 438 DAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLD 497
D G V + L +N K++D ++ E+ D VI GLC
Sbjct: 597 DNGYLVKME---ELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHS 653
Query: 498 KSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIE 535
++ L +++ G S + + AG+ +E++
Sbjct: 654 EAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQ 691
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 166/408 (40%), Gaps = 62/408 (15%)
Query: 123 NAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHII 182
N++I + A + E++ LF Q I P+++++N++++ GR +A +L+ +
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTM-KQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 183 ATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNL 242
T P + T+ L GF + EA + ++M D + YN +I G G +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 243 DKA-NELFDELKERCLVYDGVVN-ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 300
A N L LK+ V+ VV+ T + + EA+ + ++ R K VT N
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR 360
L++ L + + +D++ D N D F
Sbjct: 321 TLIKGLSEAHR-------YDEIKDILIGGN------DAFT-------------------- 347
Query: 361 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY 420
FA D +N +I C+ G L A +F+E+ + L PD ++ LI
Sbjct: 348 ---------TFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 421 MKMERIDDALKVFHRMVDAGLRVVTNFC-------NRVFDELIKNDKVIDCAHILSKMGE 473
D A +F+ + + + + + C N +F+ L N K + ++ +
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK 458
Query: 474 RDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFV 521
R + DP Y+ +I G C +G + ELL ++R REFV
Sbjct: 459 RGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLR---------REFV 496
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 168/412 (40%), Gaps = 24/412 (5%)
Query: 109 HSTFSSTR------PTVFTCNAIIAAMYRAKRYNEAIALFH-FFFTQSNIVPNIVSYNNV 161
H F R P +T N +I + +EA +F N P++V+YN +
Sbjct: 193 HDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCN--PDVVTYNTI 250
Query: 162 INTHCDEGRVDVALELYRHIIATAP-FGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 220
I+ C G+V +A + ++ A P+ V+Y L +G+ I EA+ + +ML++
Sbjct: 251 IDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSR 310
Query: 221 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVY--DGVVNATYMEWFFNNGRDK 278
G +++ YN LI G E D+ ++ + + D ++ + G
Sbjct: 311 GLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLD 370
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN--S 336
AM ++ +++ + + +VL+ L + +A LF+++ + +
Sbjct: 371 AAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLA 430
Query: 337 DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAET 396
+N M GK +A FR+ + D Y +I+ C G A
Sbjct: 431 AAYNPMFEYLCANGKTKQAEKVFRQLMKRG-----VQDPPSYKTLITGHCREGKFKPAYE 485
Query: 397 LFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG-LRVVTNFCNRVFDEL 455
L + + PD+ T+ LID +K+ A RM+ + L V T F + V EL
Sbjct: 486 LLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTF-HSVLAEL 544
Query: 456 IKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKS---LELLY 504
K + +++ M E+ + + V+R L + +K+ + LLY
Sbjct: 545 AKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLY 596
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 339 FNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLF 398
FN ++ N G F E++ F+ S + V +N+++S + G A LF
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPS----VLTFNSLLSILLKRGRTGMAHDLF 196
Query: 399 EELC-SKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM--VDAGLRVVTNFCNRVFDEL 455
+E+ + ++PD T TLI+ + K +D+A ++F M VVT N + D L
Sbjct: 197 DEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTY--NTIIDGL 254
Query: 456 IKNDKVIDCAHILSKMGER--DPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV-- 511
+ KV ++LS M ++ D P+ Y ++RG C K +D+++ + + ++ G+
Sbjct: 255 CRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Query: 512 -GVT-NSLREFVTEVFKKAGRGDEIERLL 538
VT N+L + ++E A R DEI+ +L
Sbjct: 315 NAVTYNTLIKGLSE----AHRYDEIKDIL 339
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 169/398 (42%), Gaps = 54/398 (13%)
Query: 133 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 192
K+++ I + + +S+ P+++ +N +I+ + + + A LY ++ + + P+
Sbjct: 133 KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLES-RYVPTED 191
Query: 193 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSL---VYNNLISGFLEL-GNLDKANEL 248
TY L K + AG I A +L EM N ++ VYN I G ++ GN ++A ++
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 249 FDELK-ERCL----VYDGVVN------ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 297
F +K +RC Y+ ++N +YM W Y + Q K
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKL-----------YCEMRSHQCKPNIC 300
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
T L+ + G +A +F+Q+ ++ P+ N+ +
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNA------------------LME 342
Query: 358 TFRKAGT-KSNSKAFAM--------DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 408
++ +AG ++ F++ D A YN ++ + GL S+AE +FEE+ ++P
Sbjct: 343 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 402
Query: 409 DVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHIL 468
+ +H L+ AY K + + M + G+ T N + + + + IL
Sbjct: 403 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 462
Query: 469 SKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
++M D + Y ++I G L++ EL ++
Sbjct: 463 AEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 183/474 (38%), Gaps = 97/474 (20%)
Query: 49 IEPPLNAIRPPLQHSPSRDPNAPRLPDSTSAL------------VGPRLNLHNRVQSLIR 96
I P L+ I + ++ + ++ D AL V +L L+ + S+I
Sbjct: 81 IFPVLSPIAQKILSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIIL 140
Query: 97 AGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIV 156
+ + R S+F +P V N +I A + +Y EA +L+ +S VP
Sbjct: 141 VCEW-----ILRKSSF---QPDVICFNLLIDAYGQKFQYKEAESLY-VQLLESRYVPTED 191
Query: 157 SYNNVINTHCDEGRVD----VALELYRHIIATAPFGPSAVTYRHLTKGFIS-AGRIVEAL 211
+Y +I +C G ++ V +E+ H ++ G + Y +G + G EA+
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVT--VYNAYIEGLMKRKGNTEEAI 249
Query: 212 DLLREMLNK----------------GHGADSLV-------------------YNNLISGF 236
D+ + M G + S + Y L++ F
Sbjct: 250 DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 309
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
G +KA E+F++L+E L D V ME + G A + + + +
Sbjct: 310 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 369
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA----------------------- 333
+ N++++ + G + A A+F++M P ++
Sbjct: 370 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 429
Query: 334 -----VNSDTF--NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 386
V DTF N M+N LG+F K + + D++ YN +I+ +
Sbjct: 430 MSENGVEPDTFVLNSMLNLYGRLGQF----TKMEKILAEMENGPCTADISTYNILINIYG 485
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
+ G L E LF EL K+ PDV T + I AY + + L+VF M+D+G
Sbjct: 486 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 132/342 (38%), Gaps = 13/342 (3%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
R G+ + A V + +PT T N +I +A + + L+ + PNI
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH-QCKPNI 299
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
+Y ++N EG + A E++ + P Y L + + AG A ++
Sbjct: 300 CTYTALVNAFAREGLCEKAEEIFEQL-QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 358
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
M + G D YN ++ + G A +F+E+K R + + + + ++
Sbjct: 359 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK-RLGIAPTMKSHMLLLSAYSKA 417
Query: 276 RDKEAMDSY-KSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 334
RD ++ K + + + N +L + + G+ T+ + +M + +
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI--- 474
Query: 335 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
T+NI++N G F + K F DV + + I + L +
Sbjct: 475 --STYNILINIYGKAGFLERIEELF----VELKEKNFRPDVVTWTSRIGAYSRKKLYVKC 528
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
+FEE+ +PD T + L+ A E+++ V M
Sbjct: 529 LEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 185/414 (44%), Gaps = 28/414 (6%)
Query: 120 FTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYR 179
T + II R YN+AI F + ++ ++P+ V+Y+ +++ + G+V+ L LY
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMY-KTGLMPDEVTYSAILDVYSKSGKVEEVLSLYE 280
Query: 180 HIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLEL 239
+AT + P A+ + L K F AG +L+EM + + +VYN L+
Sbjct: 281 RAVATG-WKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRA 339
Query: 240 GNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTC 299
G A LF+E+ E L + ++ + ++A+ ++ + +++ M +
Sbjct: 340 GKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILY 399
Query: 300 NVLLEVLLKHGKKTQAWALFDQMLDNHT--PPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
N LL + G + +A LF+ M ++ P NF ++ M+N + GK +A+
Sbjct: 400 NTLLNMCADIGLEEEAERLFNDMKESVQCRPDNF------SYTAMLNIYGSGGKAEKAME 453
Query: 358 TFR---KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
F KAG + N V G ++ + + + +F+ + + PD
Sbjct: 454 LFEEMLKAGVQVN-------VMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCG 506
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
L+ E +DA KV + A ++VT F N + DE + + V + ++ +
Sbjct: 507 CLLSVMALCESSEDAEKVMACLERANKKLVT-FVNLIVDEKTEYETVKEEFKLVINATQV 565
Query: 475 DP-KPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV--GVTN-SLREFVTEV 524
+ +P C + RG +++ ELLY +G+ G+ N +++E+ +V
Sbjct: 566 EARRPFCNCLIDICRG---NNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDV 616
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 148/381 (38%), Gaps = 70/381 (18%)
Query: 182 IATAPFGPSAVTYRHLTKGFISAGR---IVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+ + P + ++T + GR ++E + L EM+ G D++ Y+ +I+
Sbjct: 176 VKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMAL--EMVKDGVELDNITYSTIIT---- 229
Query: 239 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKS-LMDRQFKMTPV 297
+RC +Y+ + EWF E M YK+ LM + V
Sbjct: 230 -------------CAKRCNLYNKAI-----EWF-------ERM--YKTGLMPDE-----V 257
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
T + +L+V K GK + +L+++ + P+ A+ M E + L
Sbjct: 258 TYSAILDVYSKSGKVEEVLSLYERAVATGWKPD--AIAFSVLGKMFGEAGDYDGIRYVLQ 315
Query: 358 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
+ K N V YN ++ G A +LF E+ L+P+ T L+
Sbjct: 316 EMKSMDVKPN-------VVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALV 368
Query: 418 DAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHI-LSKMGER-- 474
Y K DAL+++ M + D ++ N + CA I L + ER
Sbjct: 369 KIYGKARWARDALQLWEEMKAKKWPM---------DFILYNTLLNMCADIGLEEEAERLF 419
Query: 475 -------DPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKK 527
+PD Y ++ + G +K++EL ++++ GV V + + K
Sbjct: 420 NDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGK 479
Query: 528 AGRGDEIERLLDFNTPRYRPP 548
A R D++ + D + R P
Sbjct: 480 AKRIDDVVYVFDLSIKRGVKP 500
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 158/406 (38%), Gaps = 59/406 (14%)
Query: 146 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 205
F NI + V YN + GRV+ A EL + + P + Y L G+ G
Sbjct: 379 FRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM-KDRGIVPDVINYTTLIDGYCLQG 437
Query: 206 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 265
++V+ALDL+ EM+ G D + YN L+SG G+ ++ E+++ +K + V N+
Sbjct: 438 KVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNS 497
Query: 266 TYMEWFFNNGRDKEAMD----------------------------SYKSLMDRQFKMTPV 297
+E + KEA D +YK+ + ++ +
Sbjct: 498 VIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKS 557
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
L L G +A + +M P M+ L EA
Sbjct: 558 VYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGK-----MIGAFCKLNNVREAQV 612
Query: 358 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
F + D+ Y +I +C L +AE+LFE++ + + PDV T+ L+
Sbjct: 613 LF----DTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Query: 418 DAYMKME----------------RIDDALKVFHRMVDAGLRVVTNFCNRVF-DELIKNDK 460
D Y+K++ + + L+ F GL VV C V D K +
Sbjct: 669 DRYLKLDPEHHETCSVQGEVGKRKASEVLREFS-AAGIGLDVV---CYTVLIDRQCKMNN 724
Query: 461 VIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
+ A + +M + +PD Y +I KG +D ++ L+ ++
Sbjct: 725 LEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTEL 770
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 152/374 (40%), Gaps = 26/374 (6%)
Query: 124 AIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIA 183
A++ A ++EA + F + + V +I + N ++N + G++ + + L++ +
Sbjct: 151 ALVKAYVSLGMFDEATDVL-FQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQL-K 208
Query: 184 TAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLD 243
+ TY + K G + EA LL E Y I+G G +
Sbjct: 209 QLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLCVTGETE 262
Query: 244 KANELFDELKER-CLVYDGV--VNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 300
KA L EL +R L D + V + F N + K A + + F + C
Sbjct: 263 KAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACL 322
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECF-NLGKFHEALATF 359
+++ K+ +A D+ML N V+ ++ +C+ + EAL F
Sbjct: 323 AVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVS------LILQCYCKMDMCLEALEKF 376
Query: 360 RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDA 419
++ +D YN + G + EA L +E+ + + PDV + TLID
Sbjct: 377 KEF----RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDG 432
Query: 420 YMKMERIDDALKVFHRMVDAGLR--VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPK 477
Y ++ DAL + M+ G+ ++T N + L +N + I +M PK
Sbjct: 433 YCLQGKVVDALDLIDEMIGNGMSPDLITY--NVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Query: 478 PDPTCYEVVIRGLC 491
P+ V+I GLC
Sbjct: 491 PNAVTNSVIIEGLC 504
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 98/493 (19%), Positives = 191/493 (38%), Gaps = 52/493 (10%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
V++ + G D A+ V S + CN ++ M + + LF Q
Sbjct: 153 VKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQL-KQLG 211
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ N +Y V+ C +G ++ A L I + FG Y+ G G +A
Sbjct: 212 LCANEYTYAIVVKALCRKGNLEEAAMLL--IENESVFG-----YKTFINGLCVTGETEKA 264
Query: 211 LDLLREMLNKGHGA-DSL--VYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
+ L+ E++++ + A D L V ++ GF + A + E++E D
Sbjct: 265 VALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAV 324
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
++ + N EA+ ++ + K+ V +++L+ K +A F + D +
Sbjct: 325 IDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNI 384
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
++ +N+ + LG+ EA ++ + DV Y +I +C
Sbjct: 385 -----FLDRVCYNVAFDALSKLGRVEEAFELLQEM----KDRGIVPDVINYTTLIDGYCL 435
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--VVT 445
G + +A L +E+ +SPD+ T+ L+ + ++ L+++ RM G + VT
Sbjct: 436 QGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVT 495
Query: 446 NFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPT-------------CYEVVIR---- 488
N + + + L KV + S + ++ P+ + Y+ +R
Sbjct: 496 N--SVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYP 553
Query: 489 -----------GLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERL 537
LC +G L+K+ ++L ++ Y V S+ + F K E + L
Sbjct: 554 LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVL 613
Query: 538 LDFNTPRYRPPQL 550
D R P L
Sbjct: 614 FDTMVERGLIPDL 626
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 169/433 (39%), Gaps = 50/433 (11%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
V+ C A+I + EA+ + + N V + ++ +C ALE +
Sbjct: 318 VYACLAVIDRYCKNMNLPEALGFLDKMLGKG-LKVNCVIVSLILQCYCKMDMCLEALEKF 376
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+ F V Y GR+ EA +LL+EM ++G D + Y LI G+
Sbjct: 377 KEFRDMNIF-LDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCL 435
Query: 239 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 298
G + A +L DE+ + D + + NG ++E ++ Y+ + K VT
Sbjct: 436 QGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVT 495
Query: 299 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 358
+V++E L K +A F L+ P N +F E K ++A
Sbjct: 496 NSVIIEGLCFARKVKEAEDFFSS-LEQKCPE-----NKASFVKGYCEAGLSKKAYKAFVR 549
Query: 359 FRKAGTKSN--SKAFAMDVAGY-----------------------NNIISRFCENGLLSE 393
KS F++ + GY +I FC+ + E
Sbjct: 550 LEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVRE 609
Query: 394 AETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--VVTNFCNRV 451
A+ LF+ + + L PD+ T+ +I Y ++ + A +F M G++ VVT +
Sbjct: 610 AQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTY--TVL 667
Query: 452 FDELIKND-KVIDCAHILSKMGERDPKP------------DPTCYEVVIRGLCAKGLLDK 498
D +K D + + + ++G+R D CY V+I C L++
Sbjct: 668 LDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQ 727
Query: 499 SLELLYQVMRYGV 511
+ EL +++ G+
Sbjct: 728 AAELFDRMIDSGL 740
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/482 (20%), Positives = 192/482 (39%), Gaps = 22/482 (4%)
Query: 73 LPDSTSALVGP-RLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYR 131
+ D A + P R +N + + +G+ A V + T + P + T N +++A
Sbjct: 69 MDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKS 128
Query: 132 AKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT-APFGPS 190
++Y++A++ F + + P+ ++N +I G+ AL+L+ + A P
Sbjct: 129 GRQYSKALSYFELM-KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 187
Query: 191 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 250
VT+ + + G I + M+ +G + + YN L+ + G A +
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 251 ELKERCLVYDGVVNATYMEWFFNN---GRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEV 305
++K+ ++ D V + + + G+ KE LM R+ + P VT N L++
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF-----LMMRKERRKPNVVTYNALIDA 302
Query: 306 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 365
+G +A +F QM + PN +V + ++ C K A
Sbjct: 303 YGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT-----LLAACSRSKKKVNVDTVLSAA--- 354
Query: 366 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMER 425
S+ ++ A YN+ I + L +A L++ + K + D T LI +M +
Sbjct: 355 -QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 413
Query: 426 IDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEV 485
+A+ M D + + + V K +V + I ++M +PD Y
Sbjct: 414 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 473
Query: 486 VIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRY 545
++ A K+ EL ++ G+ + + F K G+ + L+D +
Sbjct: 474 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE 533
Query: 546 RP 547
P
Sbjct: 534 IP 535
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 154/382 (40%), Gaps = 36/382 (9%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
YN +I H VD A L+ + P A TY L AG+ A++L+ +M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEM-QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
L YNNLI+ GN +A E+ ++ + + D V + + + +GR
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS-AYKSGRQ 131
Query: 278 KEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP--PNFQA 333
SY LM + K+ P T N+++ L K G+ +QA LF+ M + P+
Sbjct: 132 YSKALSYFELM-KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 334 VNS---------------DTFNIMVNECF--NLGKFHEALATFRKAGTKSNS-------- 368
S F MV E N+ ++ + + G +
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 250
Query: 369 -KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERID 427
DV Y +++ + + +A+ +F + + P+V T+ LIDAY +
Sbjct: 251 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 310
Query: 428 DALKVFHRMVDAGLR-VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVV 486
+A+++F +M G++ V + C + ++ K ++ +LS R + Y
Sbjct: 311 EAVEIFRQMEQDGIKPNVVSVCT-LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 369
Query: 487 IRGLCAKGLLDKSLELLYQVMR 508
I L+K++ LYQ MR
Sbjct: 370 IGSYINAAELEKAIA-LYQSMR 390
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 180/413 (43%), Gaps = 69/413 (16%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
+ TCNA++ + +R NEA LF + N+VS+ ++ CD+GR + A+EL+
Sbjct: 108 IVTCNAMLTGYVKCRRMNEAWTLFR------EMPKNVVSWTVMLTALCDDGRSEDAVELF 161
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+ + V++ L G I G + +A + M ++ D + +N +I G++E
Sbjct: 162 DEMPE-----RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIE 212
Query: 239 LGNLDKANELFDELKERCLVYDGVVNATYMEW-FFNNGRDKEAMDSYKSLMDRQFKMTPV 297
+++A LF ++ E+ VV T M + + G +EA + + +R V
Sbjct: 213 NDGMEEAKLLFGDMSEK-----NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI----V 263
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV--NSDTFNIMVNECFNLG----- 350
+ ++ + +A LF +M + AV N +T + C LG
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEM-----KKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 351 ---KFHEALAT-------------------FRKAGTKSNSKAF---AMDVAGYNNIISRF 385
+ H + + + +G +++++ + D+ N II+R+
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRY 378
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVT 445
+NG L AETLFE + KSL V + ++ID Y++ + A +F ++ D T
Sbjct: 379 LKNGDLERAETLFERV--KSLHDKV-SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWT 435
Query: 446 NFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDK 498
+ L++N+ + A +LS M KP + Y V++ A LD+
Sbjct: 436 ----VMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 154/381 (40%), Gaps = 43/381 (11%)
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
+CN II + A LF + + + VS+ ++I+ + + G V A L++
Sbjct: 370 SCNIIINRYLKNGDLERAETLFE----RVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK 425
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
+ VT+ + G + EA LL +M+ G + Y+ L+S
Sbjct: 426 L-----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATS 480
Query: 241 NLDKANELFDELKERCLVY--DGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 298
NLD+ + + + Y D ++ + + + G ++A + + ++ + V+
Sbjct: 481 NLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD----TVS 536
Query: 299 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 358
N ++ L HG +A LF +MLD+ P NS TF +++ C + G L
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGKKP-----NSVTFLGVLSACSHSGLITRGLEL 591
Query: 359 FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLID 418
F KA ++ S +D Y ++I G L EAE L +PD + L+
Sbjct: 592 F-KAMKETYSIQPGID--HYISMIDLLGRAGKLKEAEEFISAL---PFTPDHTVYGALLG 645
Query: 419 AYMKMERIDDALKVFHRMVDAGLRVV----------TNFCNRVFDELIKNDKVIDCAHIL 468
R DA + R A +R++ CN V+ L ++D +
Sbjct: 646 LCGLNWRDKDAEGIAER---AAMRLLELDPVNAPGHVALCN-VYAGLGRHDME---KEMR 698
Query: 469 SKMGERDPKPDPTCYEVVIRG 489
+MG + K P C VV+ G
Sbjct: 699 KEMGIKGVKKTPGCSWVVVNG 719
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 30/235 (12%)
Query: 202 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
+S G +V A LL ++ +G + + +L+S + + G LD+A LF+ + ER +V
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
+ Y++ R EA + R+ V+ V+L L G+ A LFD+
Sbjct: 113 AMLTGYVK----CRRMNEAWTLF-----REMPKNVVSWTVMLTALCDDGRSEDAVELFDE 163
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
M P V ++N +V G +A F ++ DV +N +
Sbjct: 164 M------PERNVV---SWNTLVTGLIRNGDMEKAKQVFDAMPSR--------DVVSWNAM 206
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
I + EN + EA+ LF ++ K +V T +++ Y + + +A ++F M
Sbjct: 207 IKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEM 257
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 166/422 (39%), Gaps = 34/422 (8%)
Query: 101 DAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNN 160
D A + RP +++I ++ A R++EA F F S +P+ + N
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRF-LLFLASGFIPDERTCNV 130
Query: 161 VI-NTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 219
+I V ++R I F PS Y L + R+++A L+ +M N
Sbjct: 131 IIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRN 190
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
+GH D + + LI G+ E+ L+ A+++FDE++ C + + + + F RD E
Sbjct: 191 RGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRV-CGIRPNSLTLSVLIGGFLKMRDVE 249
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
+ + LM L E + + A F ++D+ + +D F
Sbjct: 250 ---TGRKLMKE-----------LWEYMKNETDTSMKAAAFANLVDSMCREGYF---NDIF 292
Query: 340 NIM--------VNECFNLGKFHEALATFRKAGTKS------NSKAFAMDVAGYNNIISRF 385
I VN F G ++L +R+ + SK YN II
Sbjct: 293 EIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGL 352
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVT 445
C++G A L EE P T++ L+++ K A V M+ T
Sbjct: 353 CKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRT 412
Query: 446 NFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQ 505
N L D + ++L M + D +PD VI GLC G +D ++++L
Sbjct: 413 RIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDD 472
Query: 506 VM 507
+M
Sbjct: 473 MM 474
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 124/544 (22%), Positives = 210/544 (38%), Gaps = 101/544 (18%)
Query: 66 RDPN-APRLPDSTSALVGPR---LNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFT 121
R+P+ A R+ D L G R LNL + + SL AG D A S P T
Sbjct: 69 RNPDEALRILDGL-CLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERT 127
Query: 122 CNAIIAAMYRAKRYNEAIALFHFFFT-QSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
CN IIA + ++ + + H + VP++ +YN ++N C RV ++ ++
Sbjct: 128 CNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRV---IDAHKL 184
Query: 181 IIATAPFG--PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+ G P VT+ L G+ + A + EM G +SL + LI GFL+
Sbjct: 185 VFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLK 244
Query: 239 LGNLDKANELFDELKE----------RCLVYDGVVNATYMEWFFNN-------------- 274
+ +++ +L EL E + + +V++ E +FN+
Sbjct: 245 MRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESV 304
Query: 275 ------GRDKEAMDSYKS----------LMDRQFKMTPVTCNVLLEVLLKHGKKTQAWAL 318
G +++ Y+ + + K + N ++ L K G +A+ L
Sbjct: 305 NVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQL 364
Query: 319 FDQMLDNHTPPNFQAVNSD-TFNIMVNE-CFNL--GKFHEALA-TFRKAGTKSNSKAFAM 373
++ F+ S+ T+ +++ C L GK L RK G
Sbjct: 365 LEE------GSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRI---- 414
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
YN + C +E + + PD T T+I+ KM R+DDA+KV
Sbjct: 415 ----YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVL 470
Query: 434 HRMVDAGLRVVTNFC-------NRVFDELIKNDKVIDCAHILSK-MGERDPKPDPTCYEV 485
M+ FC N V L+ + + +L++ M E KP Y
Sbjct: 471 DDMMTG------KFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNA 524
Query: 486 VIRGLCAKGLLDKSLELL--------------YQVMRYGVGVTNSL---REFVTEVFKKA 528
VIRGL D+++ + Y ++ G+ VTN + ++F +V +
Sbjct: 525 VIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPS 584
Query: 529 GRGD 532
GR D
Sbjct: 585 GRHD 588
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 91/215 (42%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
RP +T N +I + + R ++A+ + T P+ V+ N V+ +GR + AL
Sbjct: 444 RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEAL 503
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
++ ++ P V Y + +G + EA+ + ++ ADS Y +I G
Sbjct: 504 DVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDG 563
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
+D A + +D++ +D V A +++ +G +A L D
Sbjct: 564 LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPN 623
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
V N ++ + G K +A+ + ++M N P+
Sbjct: 624 VVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPD 658
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 164/426 (38%), Gaps = 52/426 (12%)
Query: 89 NRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQ 148
N V S+ R G + +A + + + F +I ++ R +R N A +
Sbjct: 277 NLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRR-NHGAARIVYIMKS 335
Query: 149 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 208
+ P SYN +I+ C +G A +L + F PS TY+ L +
Sbjct: 336 KGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG-SEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 209 EALDLLREMLNKGHGAD-SLVYNNLISGFLELGN-LDKANELFDELKERCLVYDGVVNAT 266
+A ++L ML K GAD + +YN + G + N + N L L+ C + +N T
Sbjct: 395 KARNVLELMLRK-EGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLN-T 452
Query: 267 YMEWFFNNGRDKEAMDSYKSLMDRQFKM-TPVTCNVLLEVLLKHGKKTQAWALFDQML-D 324
+ GR +AM +M +F VT N ++ LL G+ +A + ++++ +
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE 512
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
N P A +N ++ F L K EA+
Sbjct: 513 NKIKPGVVA-----YNAVIRGLFKLHKGDEAM---------------------------- 539
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVV 444
++F +L S++ D T+ +ID ++D A K + ++ R
Sbjct: 540 -----------SVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHD 588
Query: 445 TNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLY 504
L ++ + D H L + + P+ CY VI GL ++ ++L
Sbjct: 589 AFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILE 648
Query: 505 QVMRYG 510
++ + G
Sbjct: 649 EMRKNG 654
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 169/398 (42%), Gaps = 54/398 (13%)
Query: 133 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 192
K+++ I + + +S+ P+++ +N +I+ + + + A LY ++ + + P+
Sbjct: 155 KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLES-RYVPTED 213
Query: 193 TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSL---VYNNLISGFLEL-GNLDKANEL 248
TY L K + AG I A +L EM N ++ VYN I G ++ GN ++A ++
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 249 FDELK-ERCL----VYDGVVN------ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 297
F +K +RC Y+ ++N +YM W Y + Q K
Sbjct: 274 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSW-----------KLYCEMRSHQCKPNIC 322
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
T L+ + G +A +F+Q+ ++ P+ N+ +
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNA------------------LME 364
Query: 358 TFRKAGT-KSNSKAFAM--------DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 408
++ +AG ++ F++ D A YN ++ + GL S+AE +FEE+ ++P
Sbjct: 365 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 424
Query: 409 DVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHIL 468
+ +H L+ AY K + + M + G+ T N + + + + IL
Sbjct: 425 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 484
Query: 469 SKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
++M D + Y ++I G L++ EL ++
Sbjct: 485 AEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 183/474 (38%), Gaps = 97/474 (20%)
Query: 49 IEPPLNAIRPPLQHSPSRDPNAPRLPDSTSAL------------VGPRLNLHNRVQSLIR 96
I P L+ I + ++ + ++ D AL V +L L+ + S+I
Sbjct: 103 IFPVLSPIAQKILSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIIL 162
Query: 97 AGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIV 156
+ + R S+F +P V N +I A + +Y EA +L+ +S VP
Sbjct: 163 VCEW-----ILRKSSF---QPDVICFNLLIDAYGQKFQYKEAESLY-VQLLESRYVPTED 213
Query: 157 SYNNVINTHCDEGRVD----VALELYRHIIATAPFGPSAVTYRHLTKGFIS-AGRIVEAL 211
+Y +I +C G ++ V +E+ H ++ G + Y +G + G EA+
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVT--VYNAYIEGLMKRKGNTEEAI 271
Query: 212 DLLREMLNK----------------GHGADSLV-------------------YNNLISGF 236
D+ + M G + S + Y L++ F
Sbjct: 272 DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 331
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
G +KA E+F++L+E L D V ME + G A + + + +
Sbjct: 332 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 391
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA----------------------- 333
+ N++++ + G + A A+F++M P ++
Sbjct: 392 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 451
Query: 334 -----VNSDTF--NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 386
V DTF N M+N LG+F K + + D++ YN +I+ +
Sbjct: 452 MSENGVEPDTFVLNSMLNLYGRLGQF----TKMEKILAEMENGPCTADISTYNILINIYG 507
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
+ G L E LF EL K+ PDV T + I AY + + L+VF M+D+G
Sbjct: 508 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 132/342 (38%), Gaps = 13/342 (3%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
R G+ + A V + +PT T N +I +A + + L+ + PNI
Sbjct: 263 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH-QCKPNI 321
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
+Y ++N EG + A E++ + P Y L + + AG A ++
Sbjct: 322 CTYTALVNAFAREGLCEKAEEIFEQL-QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 380
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNG 275
M + G D YN ++ + G A +F+E+K R + + + + ++
Sbjct: 381 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK-RLGIAPTMKSHMLLLSAYSKA 439
Query: 276 RDKEAMDSY-KSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 334
RD ++ K + + + N +L + + G+ T+ + +M + +
Sbjct: 440 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI--- 496
Query: 335 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
T+NI++N G F + K F DV + + I + L +
Sbjct: 497 --STYNILINIYGKAGFLERIEELF----VELKEKNFRPDVVTWTSRIGAYSRKKLYVKC 550
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
+FEE+ +PD T + L+ A E+++ V M
Sbjct: 551 LEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 177/428 (41%), Gaps = 22/428 (5%)
Query: 110 STFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEG 169
S S+ + + +++ + R + ++AL + ++ P++ +YN V+
Sbjct: 110 SLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAK 169
Query: 170 RVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVY 229
+ D+A L+ + A P TY L F G AL L++M D ++Y
Sbjct: 170 QFDIAHGLFDEMRQRA-LAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLY 228
Query: 230 NNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD 289
+NLI L + KA +F LK + D V + + + +EA K + +
Sbjct: 229 SNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNE 288
Query: 290 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 349
V+ + LL V +++ K +A ++F +M + + A++ T NIM++ L
Sbjct: 289 AGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC-----ALDLTTCNIMIDVYGQL 343
Query: 350 GKFHEALATF---RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 406
EA F RK + N V YN I+ + E L EA LF + K +
Sbjct: 344 DMVKEADRLFWSLRKMDIEPN-------VVSYNTILRVYGEAELFGEAIHLFRLMQRKDI 396
Query: 407 SPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAH 466
+V T+ T+I Y K + A + M G+ + + K K+ A
Sbjct: 397 EQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAAT 456
Query: 467 ILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSL-REFVTEVF 525
+ K+ + D Y+ +I GL+ + LL++ + + +++ RE +
Sbjct: 457 LFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHE-----LKLPDNIPRETAITIL 511
Query: 526 KKAGRGDE 533
KAGR +E
Sbjct: 512 AKAGRTEE 519
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 146/353 (41%), Gaps = 44/353 (12%)
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
TCN +I + EA LF + + +I PN+VSYN ++ + + A+ L+R
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLF-WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR- 389
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
++ + VTY + K + +A +L++EM ++G +++ Y+ +IS + + G
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 241 NLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM-TPVTC 299
LD+A LF +L+ + D V+ T + + G M K L+ + K+ +
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG----LMGHAKRLL-HELKLPDNIPR 504
Query: 300 NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF 359
+ +L K G+ +A +F Q ++ + F M+N ++ + F
Sbjct: 505 ETAITILAKAGRTEEATWVFRQAFESGEVKDI-----SVFGCMINLYSRNQRYVNVIEVF 559
Query: 360 ---RKAGTKSNSKAFAMDVAGYNN----------------------------IISRFCEN 388
R AG +S AM + Y ++S +
Sbjct: 560 EKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSK 619
Query: 389 GLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
E+LF+ L S H + Y + ++++DA +V +RM + G+
Sbjct: 620 KDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 156/329 (47%), Gaps = 44/329 (13%)
Query: 113 SSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD 172
SS+RP V +I + + + EA LF + ++V++ +VI + G +
Sbjct: 40 SSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER-----DVVTWTHVITGYIKLGDMR 94
Query: 173 VALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNL 232
A EL+ + + + VT+ + G++ + ++ A L +EM + + + +N +
Sbjct: 95 EARELFDRVDSR----KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTM 146
Query: 233 ISGFLELGNLDKANELFDELKERCLV-YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ 291
I G+ + G +DKA ELFDE+ ER +V ++ +V A GR EAM+ L +R
Sbjct: 147 IDGYAQSGRIDKALELFDEMPERNIVSWNSMVKA-----LVQRGRIDEAMN----LFERM 197
Query: 292 FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 351
+ V+ +++ L K+GK +A LFD M + N ++N M+ +
Sbjct: 198 PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER---------NIISWNAMITGYAQNNR 248
Query: 352 FHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVP 411
EA F+ + D A +N +I+ F N +++A LF+ + K +V
Sbjct: 249 IDEADQLFQVMPER--------DFASWNTMITGFIRNREMNKACGLFDRMPEK----NVI 296
Query: 412 THRTLIDAYMKMERIDDALKVFHRMVDAG 440
+ T+I Y++ + ++AL VF +M+ G
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDG 325
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 28/202 (13%)
Query: 302 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 361
L+ L K GK +A LFD + P V T+ ++ LG EA F +
Sbjct: 52 LIGELCKVGKIAEARKLFDGL------PERDVV---TWTHVITGYIKLGDMREARELFDR 102
Query: 362 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYM 421
++ N V + ++S + + LS AE LF+E+ + +V + T+ID Y
Sbjct: 103 VDSRKN-------VVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYA 151
Query: 422 KMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPT 481
+ RID AL++F M + R + ++ N + L++ ++ + ++ +M P+ D
Sbjct: 152 QSGRIDKALELFDEMPE---RNIVSW-NSMVKALVQRGRIDEAMNLFERM----PRRDVV 203
Query: 482 CYEVVIRGLCAKGLLDKSLELL 503
+ ++ GL G +D++ L
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLF 225
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 32/336 (9%)
Query: 97 AGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIV 156
+G+LD A + S +PT T N +I + + E+ L + PN
Sbjct: 402 SGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDR 461
Query: 157 SYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR- 215
+ N ++ C++ +++ A + + + + P VT+ L K + G A D++
Sbjct: 462 TCNILVQAWCNQRKIEEAWNIV-YKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIP 520
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE-----RCLVYDGVVNATYMEW 270
ML+ + +++G+ E G +++A F +KE V++ ++
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG----- 575
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 328
F N D + + LM+ +F + P VT + L+ G + ++ ML+
Sbjct: 576 -FLNINDMDGVGEVVDLME-EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGID 633
Query: 329 PNFQAVNSDTFNIMVNECFNLG---KFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
P+ A F+I+ G K + L RK G + N V Y IIS +
Sbjct: 634 PDIHA-----FSILAKGYARAGEPEKAEQILNQMRKFGVRPN-------VVIYTQIISGW 681
Query: 386 CENGLLSEAETLFEELCS-KSLSPDVPTHRTLIDAY 420
C G + +A +++++C LSP++ T+ TLI +
Sbjct: 682 CSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGF 717
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 153/365 (41%), Gaps = 22/365 (6%)
Query: 154 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 213
++ S ++N + GR A ++ +I PS +TY L L L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEG-HKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 214 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 273
+ ++ G D++++N +I+ E GNLD+A ++F+++KE T ++ +
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 274 NGRDKEAMDSYKSLM-DRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
G+ +E+ ++ D + TCN+L++ K +AW + +M P+
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
TFN + +G A + K +V I++ +CE G +
Sbjct: 497 -----TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKP---NVRTCGTIVNGYCEEGKME 548
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--VVTNFCNR 450
EA F + + P++ +LI ++ + +D +V M + G++ VVT
Sbjct: 549 EALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVT----- 603
Query: 451 VFDELIKNDKVID----CAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
F L+ + C I + M E PD + ++ +G G +K+ ++L Q+
Sbjct: 604 -FSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQM 662
Query: 507 MRYGV 511
++GV
Sbjct: 663 RKFGV 667
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 157/381 (41%), Gaps = 24/381 (6%)
Query: 167 DEGRVDVALELYRHIIATAPFGPSAVTYR-HLTKGFISAGRIVEALDLLREMLNKGHGAD 225
+EGRV L + +I + V R L G I GR EA + ++ +GH
Sbjct: 296 EEGRVQ--LRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPS 353
Query: 226 SLVYNNLISGFLELGNLDKANELFDE-----LKERCLVYDGVVNATYMEWFFNNGRDKEA 280
+ Y L++ + L + LK ++++ ++NA+ +G +A
Sbjct: 354 LITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS-----ESGNLDQA 408
Query: 281 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML-DNHTPPNFQAVNSDTF 339
M ++ + + K T T N L++ K GK ++ L D ML D PN T
Sbjct: 409 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPN-----DRTC 463
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE-TLF 398
NI+V N K EA K S DV +N + + G AE +
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKM----QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMII 519
Query: 399 EELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKN 458
+ + P+V T T+++ Y + ++++AL+ F+RM + G+ N + +
Sbjct: 520 PRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNI 579
Query: 459 DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLR 518
+ + ++ M E KPD + ++ + G + + E+ ++ G+
Sbjct: 580 NDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF 639
Query: 519 EFVTEVFKKAGRGDEIERLLD 539
+ + + +AG ++ E++L+
Sbjct: 640 SILAKGYARAGEPEKAEQILN 660
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/458 (19%), Positives = 187/458 (40%), Gaps = 19/458 (4%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
+T V R L N LI G A S+ +P++ T ++ A+ R K +
Sbjct: 314 TTCGDVRSRTKLMN---GLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHF 370
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
+ ++L ++ + P+ + +N +IN + G +D A++++ + + P+A T+
Sbjct: 371 HSLLSLISKV-EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKM-KESGCKPTASTFN 428
Query: 196 HLTKGFISAGRIVEALDLLREML-NKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 254
L KG+ G++ E+ LL ML ++ + N L+ + +++A + +++
Sbjct: 429 TLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS 488
Query: 255 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYK-SLMDRQFKMTPVTCNVLLEVLLKHGKKT 313
+ D V T + + G A D ++ + K TC ++ + GK
Sbjct: 489 YGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKME 548
Query: 314 QAWALFDQMLDNHTPPNFQAVNSDTFNIM-VNECFNLGKFHEALATFRKAGTKSNSKAFA 372
+A F +M + PN NS + +N+ +G+ + + F G K
Sbjct: 549 EALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF---GVKP------ 599
Query: 373 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKV 432
DV ++ +++ + G + E ++ ++ + PD+ L Y + + A ++
Sbjct: 600 -DVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQI 658
Query: 433 FHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKM-GERDPKPDPTCYEVVIRGLC 491
++M G+R ++ ++ + KM G P+ T YE +I G
Sbjct: 659 LNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFG 718
Query: 492 AKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAG 529
K+ ELL + V T + + + +K G
Sbjct: 719 EAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 159/364 (43%), Gaps = 23/364 (6%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
PN + ++ C G V A ++ +I + S + L GF +G +A+D
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSG-ISVSVNVWSMLVSGFFRSGEPQKAVD 268
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L +M+ G + + Y +LI GF++LG +D+A + +++ L D V+ + +
Sbjct: 269 LFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYT 328
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQM--LDNHTPPN 330
GR +EA + SL R+ T +L L GK FD + + + +
Sbjct: 329 RLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGK-------FDLVPRITHGIGTD 381
Query: 331 FQAVNSDTFNIMVNECFN-LGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
F V + +++ CF+ +G AL K + + K FA+D Y +S C G
Sbjct: 382 FDLVTGN----LLSNCFSKIGYNSYAL----KVLSIMSYKDFALDCYTYTVYLSALCRGG 433
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG--LRVVTNF 447
A +++ + + D H +ID+ +++ + + A+ +F R + L VV+
Sbjct: 434 APRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSY- 492
Query: 448 CNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
L++ ++ + + M E P+ Y +I GLC + +K ++L + +
Sbjct: 493 -TVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECI 551
Query: 508 RYGV 511
+ GV
Sbjct: 552 QEGV 555
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 121/304 (39%), Gaps = 46/304 (15%)
Query: 174 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI 233
A++L+ +I P+ VTY L KGF+ G + EA +L ++ ++G D ++ N +I
Sbjct: 266 AVDLFNKMIQIGC-SPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMI 324
Query: 234 SGFLELGNLDKANELFDELKERCLV--------------------------------YDG 261
+ LG ++A ++F L++R LV +D
Sbjct: 325 HTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDL 384
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
V F G + A+ + + F + T V L L + G A ++
Sbjct: 385 VTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKI 444
Query: 322 MLD--NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 379
++ H +F + +++ LGK++ A+ F++ + + +DV Y
Sbjct: 445 IIKEKKHLDAHFHSA-------IIDSLIELGKYNTAVHLFKRCILEK----YPLDVVSYT 493
Query: 380 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDA 439
I + EA +L ++ + P+ T+RT+I K + + K+ +
Sbjct: 494 VAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQE 553
Query: 440 GLRV 443
G+ +
Sbjct: 554 GVEL 557
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 115/247 (46%), Gaps = 9/247 (3%)
Query: 225 DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY 284
D + +I E+ L+ A + ++ E+ + +D + +E + G +E++ +
Sbjct: 149 DRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIF 208
Query: 285 KSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVN 344
+ + D + T + N L +V+L+ G+ A F++M+ P T+N+M+
Sbjct: 209 QKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRH-----TYNLMLW 263
Query: 345 ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSK 404
F + AL F T+ + D A +N +I+ FC + EAE LF E+
Sbjct: 264 GFFLSLRLETALRFFEDMKTR----GISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGN 319
Query: 405 SLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDC 464
+ P V ++ T+I Y+ ++R+DD L++F M +G+ + + L K+++
Sbjct: 320 KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA 379
Query: 465 AHILSKM 471
+IL M
Sbjct: 380 KNILKNM 386
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 145/344 (42%), Gaps = 29/344 (8%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P T N +I R K+ +EA LF + I P++VSY +I + RVD L
Sbjct: 288 PDDATFNTMINGFCRFKKMDEAEKLF-VEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLR 346
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA--DSLVYNNLIS 234
++ + ++ P+A TY L G AG++VEA ++L+ M+ K H A D+ ++ L+
Sbjct: 347 IFEEM-RSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK-HIAPKDNSIFLKLLV 404
Query: 235 GFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ--- 291
+ G++ A E+ + + + +E A+ +L++++
Sbjct: 405 SQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIIL 464
Query: 292 -----FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC 346
+M P N ++E L +G+ +A LF Q++ + D N ++
Sbjct: 465 RHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ------DQDALNNLIRGH 518
Query: 347 FNLGK---FHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCS 403
G +E L + G S A+ + +I + G +A+T + +
Sbjct: 519 AKEGNPDSSYEILKIMSRRGVPRESNAYEL-------LIKSYMSKGEPGDAKTALDSMVE 571
Query: 404 KSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNF 447
PD R++I++ + R+ A +V M+D + + N
Sbjct: 572 DGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNM 615
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/429 (18%), Positives = 160/429 (37%), Gaps = 38/429 (8%)
Query: 124 AIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIA 183
+I + +A E++ +F + I SYN++ GR +A + +++
Sbjct: 190 VLIESYGKAGIVQESVKIFQKM-KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS 248
Query: 184 TAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLD 243
P+ TY + GF + R+ AL +M +G D +N +I+GF +D
Sbjct: 249 EG-VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 244 KANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLL 303
+A +LF E+K + V T ++ + R + + ++ + + T + LL
Sbjct: 308 EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
Query: 304 EVLLKHGKKTQAWALFDQMLDNHTPPNFQAV----------------------------- 334
L GK +A + M+ H P ++
Sbjct: 368 PGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNV 427
Query: 335 --NSDTFNIMVNECFNLGKFHEALATF----RKAGTKSNSKAFAMDVAGYNNIISRFCEN 388
+ + +++ ++ A+ K + M+ + YN II C N
Sbjct: 428 PAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNN 487
Query: 389 GLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFC 448
G ++AE LF +L + + D LI + K D + ++ M G+ +N
Sbjct: 488 GQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAY 546
Query: 449 NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
+ + + D L M E PD + + VI L G + + ++ ++
Sbjct: 547 ELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMID 606
Query: 509 YGVGVTNSL 517
VG+ +++
Sbjct: 607 KNVGIEDNM 615
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/439 (19%), Positives = 182/439 (41%), Gaps = 26/439 (5%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
PT T N ++ + + R A+ F T+ I P+ ++N +IN C ++D A +
Sbjct: 253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRG-ISPDDATFNTMINGFCRFKKMDEAEK 311
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L+ + GPS V+Y + KG+++ R+ + L + EM + G ++ Y+ L+ G
Sbjct: 312 LFVEMKGN-KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE---AMDSYKSLMDRQFK 293
+ G + +A + + + + N+ +++ + + + A + K++
Sbjct: 371 CDAGKMVEAKNILKNMMAKHIAPKD--NSIFLKLLVSQSKAGDMAAATEVLKAMATLNVP 428
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ---AVNSDTFNIMVNECFNLG 350
VL+E K +A L D +++ Q + +N ++ N G
Sbjct: 429 AEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNG 488
Query: 351 KFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 410
+ +A FR+ K D NN+I + G + + + + + + +
Sbjct: 489 QTAKAEVLFRQL-----MKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRES 543
Query: 411 PTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSK 470
+ LI +YM DA MV+ G ++ V + L ++ +V + ++
Sbjct: 544 NAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMI 603
Query: 471 MGERDP--KPDPTCYEVVIRGLCAKGLLDKSL---ELLYQVMRYGVGVTNSLREFVTEVF 525
M +++ + + ++ L +G ++++L +LL Q G T L ++ V
Sbjct: 604 MIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQ-----NGHTADLDSLLS-VL 657
Query: 526 KKAGRGDEIERLLDFNTPR 544
+ G+ +LLDF R
Sbjct: 658 SEKGKTIAALKLLDFGLER 676
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 165/364 (45%), Gaps = 29/364 (7%)
Query: 98 GDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVS 157
G DAA + + VFT A+I+ + +A+ +F F + +VPN V+
Sbjct: 296 GKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL-AGVVPNAVT 354
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
+ ++ ++ E++ I F + L + G++ +A + +
Sbjct: 355 IMSAVSACSCLKVINQGSEVH-SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
NK D +N++I+G+ + G KA ELF +++ L + + T + + NG +
Sbjct: 414 KNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDE 469
Query: 278 KEAMDSYKSL-MDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 336
EAMD ++ + D + + T N+++ +++GKK +A LF +M + PN + S
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 337 ---DTFNI----MVNE---CF---NLGKFH---EALA-TFRKAGTKSNSKAFAM-----D 374
N+ MV E C NL H AL T+ K+G S+ + D
Sbjct: 530 LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 589
Query: 375 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFH 434
+ +N++I + +G A LF ++ ++ ++P+ T ++I A+ M +D+ KVF+
Sbjct: 590 IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFY 649
Query: 435 RMVD 438
+ +
Sbjct: 650 SIAN 653
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/465 (21%), Positives = 190/465 (40%), Gaps = 74/465 (15%)
Query: 111 TFSSTRP-TVFTCNAIIAAMYRAKRYNEAIALFH-----------FFF------------ 146
F S R +FT +A+I A R R+ E LF F F
Sbjct: 137 VFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGD 196
Query: 147 -TQSNIVPNIV----------SYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
++ ++V N+++ + G +D A + +R + + +
Sbjct: 197 VEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRE-----RDVIAWN 251
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
+ + G+ EA++L++EM +G + +N LI G+ +LG D A +L +++
Sbjct: 252 SVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETF 311
Query: 256 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM------DRQFKMTPVTCNVLLEVLLKH 309
+ D + +NG +A+D ++ + + M+ V+ L+V+
Sbjct: 312 GITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVI-NQ 370
Query: 310 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSK 369
G + + A+ +D+ N + M ++C GK +A F K
Sbjct: 371 GSEVHSIAVKMGFIDDVLVGN-------SLVDMYSKC---GKLEDARKVFDSVKNK---- 416
Query: 370 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDA 429
DV +N++I+ +C+ G +A LF + +L P++ T T+I Y+K +A
Sbjct: 417 ----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 430 LKVFHRM-VDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIR 488
+ +F RM D ++ T N + I+N K + + KM P+ V I
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNS----VTIL 528
Query: 489 GL---CAKGLLDKSLELLYQ-VMRYGVGVTNSLREFVTEVFKKAG 529
L CA L K + ++ V+R + ++++ +T+ + K+G
Sbjct: 529 SLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSG 573
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 157/355 (44%), Gaps = 32/355 (9%)
Query: 114 STRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDV 173
ST+ V+ CN+I++ + + + + I LF + + P++V+YN ++ G + V
Sbjct: 161 STKINVYICNSILSCLVKNGKLDSCIKLFDQM-KRDGLKPDVVTYNTLL-----AGCIKV 214
Query: 174 ------ALELYRHIIATAP---FGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA 224
A+EL I P +V Y + S GR EA + +++M +GH
Sbjct: 215 KNGYPKAIEL----IGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSP 270
Query: 225 DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY 284
+ Y++L++ + G+ KA+EL E+K LV + V+ T ++ + G + +
Sbjct: 271 NIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELL 330
Query: 285 KSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF--NIM 342
L + + +L++ L K GK +A ++FD M + V SD + +IM
Sbjct: 331 SELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDM-------KGKGVRSDGYANSIM 383
Query: 343 VNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELC 402
++ +F EA R + T D+ N ++ +C G + + +++
Sbjct: 384 ISALCRSKRFKEAKELSRDSETTYEK----CDLVMLNTMLCAYCRAGEMESVMRMMKKMD 439
Query: 403 SKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
+++SPD T LI ++K + A + M G R+ C+ + L K
Sbjct: 440 EQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGK 494
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 124/527 (23%), Positives = 216/527 (40%), Gaps = 86/527 (16%)
Query: 72 RLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPT-------VFT--- 121
RL D+ + + +H SLI+ G + + +R F P+ VFT
Sbjct: 29 RLIDTQCSTMRELKQIH---ASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRIN 85
Query: 122 ------CNAIIAAMYRAKRYNEAIALFHFFFTQS-NIVPNIVSYNNVINTHCDEGRVDVA 174
N II R+ AI++F S ++ P ++Y +V + G+
Sbjct: 86 HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDG 145
Query: 175 LELYRHIIATAPFGPSAV--TYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNL 232
+L+ +I S + T H+ +++ G ++EA + M+ G D + +N++
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHM---YVTCGCLIEAWRIFLGMI----GFDVVAWNSM 198
Query: 233 ISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 292
I GF + G +D+A LFDE+ +R +GV + + F NGR K+A+D ++ + ++
Sbjct: 199 IMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDV 254
Query: 293 KMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKF 352
K T LL G Q + + ++ N +NS +++ G
Sbjct: 255 KPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFE-----LNSIVVTALIDMYCKCGCI 309
Query: 353 HEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 412
E L F A K ++ +N++I NG A LF EL L PD +
Sbjct: 310 EEGLNVFECAPKK--------QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
Query: 413 HRTLIDAYM---KMERIDDALKVFHR--MVDAGLRVVTNFCNRV--------FDELIKN- 458
++ A ++ R D+ ++ M++ ++ T N + + LIKN
Sbjct: 362 FIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM 421
Query: 459 ----DKVI------DCAHILS-KMGERDPK------PDPTC-YEVVIRGLCAKGLLDKSL 500
D VI C I + +M +R K PD TC Y ++ + GL ++++
Sbjct: 422 PVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAV 481
Query: 501 E--LLYQ--VMRYGVGVTNSLREFVTEVFKKAG----RGDEIERLLD 539
E LL + M VG ++ +F F G + EI LLD
Sbjct: 482 EQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLD 528
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 162/400 (40%), Gaps = 57/400 (14%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
RP + I + +A EA ++ F I + VS ++VI+ C G+ + A+
Sbjct: 303 RPDIVAFTVFIDKLCKAGFLKEATSVL-FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
+L I + P+ Y S G ++ A + +E+ G D + Y +I G
Sbjct: 362 KL----IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 236 FLELGNLDKANELFDELKER----CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ 291
+ LG DKA + F L + L ++ + G +A ++++
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF----GSISDAESVFRNMKTEG 473
Query: 292 FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 351
K+ VT N L+ K + + + L D+M P+ T+NI+++ G
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA-----TYNILIHSMVVRGY 528
Query: 352 FHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVP 411
EA + ++ + F + ++I F + G EA L+ + + PDV
Sbjct: 529 IDEA----NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV 584
Query: 412 THRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKM 471
T L+ Y K +R++ A+ +F++++DAGL
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGL------------------------------ 614
Query: 472 GERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
KPD Y +I G C+ G ++K+ EL+ +++ G+
Sbjct: 615 -----KPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 125/336 (37%), Gaps = 79/336 (23%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
RP +F ++ ++ + A +F F + ++P+ V Y +I+ +C+ GR D A
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIF-ELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 176 ELYRHII----------------ATAPFGP------------------SAVTYRHLTKGF 201
+ + ++ A + FG VTY +L G+
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 202 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
++ + +L+ EM + G D YN LI + G +D+ANE+ EL R V
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
+ + F G +EA + + D + K VTC+ LL K + +A LF++
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNK 608
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
+LD P DV YN +
Sbjct: 609 LLDAGLKP--------------------------------------------DVVLYNTL 624
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
I +C G + +A L + + + P+ TH L+
Sbjct: 625 IHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 136/353 (38%), Gaps = 13/353 (3%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
++ +I+ E +V++AL+L + F PS L K + + A + + M
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIF-PSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
L++G ++ V + I + G DK EL +K + D V +++ G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
KEA L V+ + +++ K GK +A L PN +S
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSF 379
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
NI + G A F++ D Y +I +C G +A
Sbjct: 380 LSNIC-----STGDMLRASTIFQEI----FELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
F L P + T LI A + I DA VF M GL++ N + K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
++ ++ +M PD Y ++I + +G +D++ E++ +++R G
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRG 543
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 162/400 (40%), Gaps = 57/400 (14%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
RP + I + +A EA ++ F I + VS ++VI+ C G+ + A+
Sbjct: 303 RPDIVAFTVFIDKLCKAGFLKEATSVL-FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
+L I + P+ Y S G ++ A + +E+ G D + Y +I G
Sbjct: 362 KL----IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 236 FLELGNLDKANELFDELKER----CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ 291
+ LG DKA + F L + L ++ + G +A ++++
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF----GSISDAESVFRNMKTEG 473
Query: 292 FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 351
K+ VT N L+ K + + + L D+M P+ T+NI+++ G
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA-----TYNILIHSMVVRGY 528
Query: 352 FHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVP 411
EA + ++ + F + ++I F + G EA L+ + + PDV
Sbjct: 529 IDEA----NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV 584
Query: 412 THRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKM 471
T L+ Y K +R++ A+ +F++++DAGL
Sbjct: 585 TCSALLHGYCKAQRMEKAIVLFNKLLDAGL------------------------------ 614
Query: 472 GERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
KPD Y +I G C+ G ++K+ EL+ +++ G+
Sbjct: 615 -----KPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 125/336 (37%), Gaps = 79/336 (23%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
RP +F ++ ++ + A +F F + ++P+ V Y +I+ +C+ GR D A
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIF-ELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 176 ELYRHII----------------ATAPFGP------------------SAVTYRHLTKGF 201
+ + ++ A + FG VTY +L G+
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 202 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
++ + +L+ EM + G D YN LI + G +D+ANE+ EL R V
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
+ + F G +EA + + D + K VTC+ LL K + +A LF++
Sbjct: 549 LAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNK 608
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
+LD P DV YN +
Sbjct: 609 LLDAGLKP--------------------------------------------DVVLYNTL 624
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
I +C G + +A L + + + P+ TH L+
Sbjct: 625 IHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 136/353 (38%), Gaps = 13/353 (3%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
++ +I+ E +V++AL+L + F PS L K + + A + + M
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIF-PSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
L++G ++ V + I + G DK EL +K + D V +++ G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
KEA L V+ + +++ K GK +A L PN +S
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSF 379
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
NI + G A F++ D Y +I +C G +A
Sbjct: 380 LSNIC-----STGDMLRASTIFQEI----FELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
F L P + T LI A + I DA VF M GL++ N + K
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
++ ++ +M PD Y ++I + +G +D++ E++ +++R G
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRG 543
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 146/354 (41%), Gaps = 22/354 (6%)
Query: 175 LELYRHIIATAP-FGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI 233
L+ +R + P + SA Y + + G + E DLL M G D + L+
Sbjct: 75 LDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILL 134
Query: 234 SGFLELGNLDKANELFDELKE--RCL---VYDGVVNATY--------MEWFFN--NGRDK 278
+ G + A + D ++E CL VYD V+ A + F D
Sbjct: 135 DSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDN 194
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 338
+ D ++ + V N LL L + +++ +F+++ F+ ++ +
Sbjct: 195 HSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKL---KGMKRFK-FDTWS 250
Query: 339 FNIMVNECFNLGKFHEALATFRKAGTKSN--SKAFAMDVAGYNNIISRFCENGLLSEAET 396
+NI ++ G AL+ F++ +S+ +F D+ YN++I C G +A
Sbjct: 251 YNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI 310
Query: 397 LFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELI 456
+++EL PD T+R LI K R+DDA++++ M G T N + D +
Sbjct: 311 VWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTL 370
Query: 457 KNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
K KV + + KM + + Y ++I GL G + L + + G
Sbjct: 371 KARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKG 424
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 8/245 (3%)
Query: 98 GDLDAASSV-----ARHSTF-SSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNI 151
GDLDAA S+ R S + SS P + T N++I + + +A+ ++ S
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDEL-KVSGH 320
Query: 152 VPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEAL 211
P+ +Y +I C R+D A+ +Y + F P + Y L G + A ++ EA
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNG-FVPDTIVYNCLLDGTLKARKVTEAC 379
Query: 212 DLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWF 271
L +M+ +G A YN LI G G + LF +LK++ D + +
Sbjct: 380 QLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQL 439
Query: 272 FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 331
G+ + A+ + + R F + VT + LL K G+ L + + + PN
Sbjct: 440 CREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNV 499
Query: 332 QAVNS 336
N+
Sbjct: 500 LRWNA 504
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 353
+T T N ++ +K G A + DQM +N F A + T+N+++ +G+
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFEN-----FCAADIATYNVIIQGLGKMGRAD 682
Query: 354 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
A A + + +D+ YN +I+ + L EA LF+ + S ++PDV ++
Sbjct: 683 LASAVLDRLTKQGG----YLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSY 738
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAG 440
T+I+ K ++ +A K M+DAG
Sbjct: 739 NTMIEVNSKAGKLKEAYKYLKAMLDAG 765
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%)
Query: 159 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 218
N ++ + +G + +A +L+ ++ TY + F+ G A +L +M
Sbjct: 598 NTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 219 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 278
AD YN +I G ++G D A+ + D L ++ D V+ T + R
Sbjct: 658 ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLD 717
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
EA + + V+ N ++EV K GK +A+ MLD PN
Sbjct: 718 EATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN 769
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 162/400 (40%), Gaps = 35/400 (8%)
Query: 137 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 196
EA ALF V ++ Y ++ +C + + +A+ LY ++ + F +
Sbjct: 255 EAEALFDHMEVDGYYVDKVM-YTCLMKEYCKDNNMTMAMRLYLRMVERS-FELDPCIFNT 312
Query: 197 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF------D 250
L GF+ G + + + +M+ KG ++ Y+ +I + + GN+D A LF +
Sbjct: 313 LIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSE 372
Query: 251 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 310
++ Y ++ F+ G +A+D ++D +T VLL++L K
Sbjct: 373 DISRNVHCYTNLIFG-----FYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCH 427
Query: 311 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 370
+ A + +LDN N ++ D NI V LG+ A G + A
Sbjct: 428 ELKYAMVILQSILDNGCGINPPVID-DLGNIEVKVESLLGEIARKDANLAAVGLAVVTTA 486
Query: 371 FAMD---VAG------------------YNNIISRFCENGLLSEAETLFEELCSKSLSPD 409
+A YN++I + ++ + +L + PD
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPD 546
Query: 410 VPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILS 469
V T+ +++ K D A + M + GLR + + L K +V++ +
Sbjct: 547 VDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFA 606
Query: 470 KMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRY 509
KM E +PD Y ++I G +D++ EL+ +V+++
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKH 646
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 169/428 (39%), Gaps = 54/428 (12%)
Query: 102 AASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNV 161
A S + + T P F+ N++I +++ + +L + + + VP++ +Y V
Sbjct: 496 ALSRIEKMVNLGCT-PLPFSYNSVIKCLFQENIIEDLASLVNII-QELDFVPDVDTYLIV 553
Query: 162 INTHCDEGRVDVALELYRHIIATAPFG--PSAVTYRHLTKGFISAGRIVEALDLLREMLN 219
+N C + D A + I A G P+ Y + GR+VEA + +ML
Sbjct: 554 VNELCKKNDRDAAFAI---IDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE 610
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
G D + Y +I+ + G +D+ANEL +E+ + L + F G ++
Sbjct: 611 SGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEK 670
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN---HTPPNFQAVNS 336
+++ V L+ LK G ++ LF M +N H + + S
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLS 730
Query: 337 DTFNIMVNE-----CFNLGKFHEALATFRKAGTKS--------NSKAFAMDVAG------ 377
+ M + GK R S SK+FAM+V G
Sbjct: 731 GLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSI 790
Query: 378 ------YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALK 431
+N II+ +C G L EA E + + + P++ T+ L+ ++++ I+ A+
Sbjct: 791 IPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAID 850
Query: 432 VF--------HRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCY 483
+F M L+ + +F + +D ++ +M + P+ Y
Sbjct: 851 LFEGTNCEPDQVMYSTLLKGLCDF-----------KRPLDALALMLEMQKSGINPNKDSY 899
Query: 484 EVVIRGLC 491
E +++ LC
Sbjct: 900 EKLLQCLC 907
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 162/436 (37%), Gaps = 53/436 (12%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ ++ G LD + + VFT + +I + + + A+ LF +
Sbjct: 314 IHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSED 373
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I N+ Y N+I +G +D A++L ++ P +TY L K + A
Sbjct: 374 ISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIV-PDHITYFVLLKMLPKCHELKYA 432
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLD-KANELFDELKER-------------- 255
+ +L+ +L+ G G + V + +LGN++ K L E+ +
Sbjct: 433 MVILQSILDNGCGINPPVID-------DLGNIEVKVESLLGEIARKDANLAAVGLAVVTT 485
Query: 256 --CLVYDGVVNATYMEWFFNNG---------------RDKEAMDSYKSLMD--RQFKMTP 296
C + + + +E N G + ++ SL++ ++ P
Sbjct: 486 ALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVP 545
Query: 297 VTCNVLLEV--LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 354
L+ V L K + A+A+ D M + P +S ++ G+ E
Sbjct: 546 DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSS-----IIGSLGKQGRVVE 600
Query: 355 ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
A TF K D Y +I+ + NG + EA L EE+ L P T+
Sbjct: 601 AEETF----AKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYT 656
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
LI ++KM ++ + +M++ GL + +K + MGE
Sbjct: 657 VLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEN 716
Query: 475 DPKPDPTCYEVVIRGL 490
D K D Y ++ GL
Sbjct: 717 DIKHDHIAYITLLSGL 732
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 83/210 (39%), Gaps = 43/210 (20%)
Query: 302 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 361
L K G +A ALFD H + V+ + ++ E A+ + +
Sbjct: 243 LFYCFCKRGCAAEAEALFD-----HMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLR 297
Query: 362 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYM 421
+S F +D +N +I F + G+L + +F ++ K + +V T+ +I +Y
Sbjct: 298 MVERS----FELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYC 353
Query: 422 KMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPT 481
K +D AL++F ++ G D +
Sbjct: 354 KEGNVDYALRLF----------------------------------VNNTGSEDISRNVH 379
Query: 482 CYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
CY +I G KG +DK+++LL +++ G+
Sbjct: 380 CYTNLIFGFYKKGGMDKAVDLLMRMLDNGI 409
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 138/317 (43%), Gaps = 23/317 (7%)
Query: 131 RAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPS 190
RA++ +EAI F+ + ++ PN+V++N +++ C V A E++ ++ F P
Sbjct: 180 RAQKVDEAIYAFNVM-EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM--RDRFTPD 236
Query: 191 AVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 250
+ TY L +G+ + +A ++ REM++ G D + Y+ ++ + G +D+A +
Sbjct: 237 SKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVR 296
Query: 251 EL-----KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV 305
+ K +Y +V+ + R +EA+D++ + K N L+
Sbjct: 297 SMDPSICKPTTFIYSVLVHT-----YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGA 351
Query: 306 LLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 365
K + + + +M PN S + NI++ G+ EA FRK
Sbjct: 352 FCKANRMKNVYRVLKEMKSKGVTPN-----SKSCNIILRHLIERGEKDEAFDVFRKM--- 403
Query: 366 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMER 425
K D Y +I FCE + A+ +++ + K + P + T LI+ +
Sbjct: 404 --IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERT 461
Query: 426 IDDALKVFHRMVDAGLR 442
A + M++ G+R
Sbjct: 462 TQKACVLLEEMIEMGIR 478
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 57/287 (19%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+IV+Y+ +++ C GRVD AL + R + + P+ Y L + + R+ EA+D
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC-KPTTFIYSVLVHTYGTENRLEEAVD 328
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
EM G AD V+N+LI F + + + E+K + GV
Sbjct: 329 TFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK-----GV---------- 373
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
TP +CN++L L++ G+K +A+ +F +M+ P
Sbjct: 374 ----------------------TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEP-- 409
Query: 331 FQAVNSDTFNIMVN---ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
++DT+ +++ E + + RK G + F++ +I+ CE
Sbjct: 410 ----DADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSV-------LINGLCE 458
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFH 434
+A L EE+ + P T L +K ER +D LK +
Sbjct: 459 ERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFLN 504
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 143/308 (46%), Gaps = 29/308 (9%)
Query: 227 LVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKS 286
+ +N L+S + N+ KA E+F+ +++R D + +E + +A + ++
Sbjct: 204 VAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFRE 262
Query: 287 LMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC 346
++D VT ++++++L K G+ +A + M P+ + ++++V+
Sbjct: 263 MIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM-----DPSICKPTTFIYSVLVHTY 317
Query: 347 FNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 406
+ EA+ TF + +S KA DVA +N++I FC+ + + +E+ SK +
Sbjct: 318 GTENRLEEAVDTFLEM-ERSGMKA---DVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 407 SPDVPTHRTLIDAYMKMERIDDALKVFHRMV-------DAGLRVVTNFCNRVFDELIKND 459
+P+ + ++ ++ D+A VF +M+ D V+ FC + E+ D
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEK--KEMETAD 431
Query: 460 KVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV---GVT-N 515
KV M ++ P + V+I GLC + K+ LL +++ G+ GVT
Sbjct: 432 KV------WKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFG 485
Query: 516 SLREFVTE 523
LR+ + +
Sbjct: 486 RLRQLLIK 493
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 191/434 (44%), Gaps = 39/434 (8%)
Query: 90 RVQSLIR-AGDLDAASSVARHSTFSSTRP------TVFTCNAIIAAMYRAKRYNEAIALF 142
R+ SL+R D AA + R+ ST P ++ + II + +K ++E +
Sbjct: 11 RLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVL 70
Query: 143 HFFFTQSNIVPNIVSYNNVINTHCDEGRVDV---ALELYRHIIATAPFGPSAVTYRHLTK 199
T + IVP + + NVIN GR + AL H+ P T + L
Sbjct: 71 LHLKTDTRIVPTEIIFCNVINFF---GRGKLPSRAL----HMFDEMPQYRCQRTVKSLNS 123
Query: 200 GFISAGRIVEALDLLREML---NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERC 256
+ + E L+ ++E L ++ D+ YN LI G + G D A +LFDE+ ++
Sbjct: 124 LLSALLKCGE-LEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKK 182
Query: 257 LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNV---LLEVLLKHGKKT 313
+ GV T + + R KEA+ K M + + + P T ++ L++ L + G+ +
Sbjct: 183 VKPTGVTFGTLIHGLCKDSRVKEAL-KMKHDMLKVYGVRP-TVHIYASLIKALCQIGELS 240
Query: 314 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 373
A+ L D+ + V++ ++ +++ G+ +E + + K
Sbjct: 241 FAFKLKDEAYEGKIK-----VDAAIYSTLISSLIKAGRSNEVSMILEEM----SEKGCKP 291
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
D YN +I+ FC A + +E+ K L PDV ++ ++ + ++++ ++A +F
Sbjct: 292 DTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLF 351
Query: 434 HRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAK 493
M G T VFD L + + + A IL +M + KP E ++ LC
Sbjct: 352 EDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCES 411
Query: 494 GLLDKSLELLYQVM 507
G LE+L +V+
Sbjct: 412 G----KLEILSKVI 421
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%)
Query: 364 TKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKM 423
T+ + K +V YN +I FC +G S+A+ L + K ++PD+ T LI+A++K
Sbjct: 34 TEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKE 93
Query: 424 ERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCY 483
++ +A +++ M+ + T N + D K D+V D +L M + PD +
Sbjct: 94 RKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTF 153
Query: 484 EVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
+I G C +D +E+ ++ R G+ + F + G D + LL+
Sbjct: 154 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 209
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 2/206 (0%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P V T N +I + + R+++A L + I P+IV+++ +IN E +V A E
Sbjct: 43 PNVLTYNCMIDSFCHSGRWSDADQLLRHMI-EKQINPDIVTFSALINAFVKERKVSEAEE 101
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+Y+ ++ + F P+ +TY + GF R+ +A +L M +KG D + ++ LI+G+
Sbjct: 102 IYKEMLRWSIF-PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGY 160
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ +D E+F E+ R +V + V T + F G A D ++
Sbjct: 161 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY 220
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQM 322
+T + +L L + +A+A+ + +
Sbjct: 221 ITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 2/219 (0%)
Query: 113 SSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD 172
S + V AI+ + + + A LF + I PN+++YN +I++ C GR
Sbjct: 4 SHIKADVVISTAIVDRLCKDGNHINAQNLFTEMH-EKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 173 VALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNL 232
A +L RH+I P VT+ L F+ ++ EA ++ +EML ++ YN++
Sbjct: 63 DADQLLRHMIE-KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 233 ISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 292
I GF + +D A + D + + D V +T + + R M+ + + R
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 293 KMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 331
VT L+ + G A L ++M+ P++
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY 220
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 27/258 (10%)
Query: 260 DGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALF 319
D V++ ++ +G A + + + ++ +T N +++ G+ + A L
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 320 DQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 379
M++ P+ TF+ ++N K EA +++ S F + YN
Sbjct: 69 RHMIEKQINPDIV-----TFSALINAFVKERKVSEAEEIYKEMLRWS---IFPTTIT-YN 119
Query: 380 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDA 439
++I FC+ + +A+ + + + SK SPDV T TLI+ Y K +R+D+ +++F M
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 440 GL--------RVVTNFCNRVFDELIKNDKVIDCAH-ILSKMGERDPKPDPTCYEVVIRGL 490
G+ ++ FC +V D +D A +L++M PD + ++ GL
Sbjct: 180 GIVANTVTYTTLIHGFC-QVGD--------LDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Query: 491 CAKGLLDKSLELLYQVMR 508
C+K L K+ +L + +
Sbjct: 231 CSKKELRKAFAILEDLQK 248
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 12/169 (7%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ + ++ + A + + S PT T N++I + R ++A + ++
Sbjct: 87 INAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG- 145
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELY-----RHIIATAPFGPSAVTYRHLTKGFISAG 205
P++V+++ +IN +C RVD +E++ R I+A + VTY L GF G
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA------NTVTYTTLIHGFCQVG 199
Query: 206 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 254
+ A DLL EM++ G D + ++ +++G L KA + ++L++
Sbjct: 200 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 9/213 (4%)
Query: 205 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 264
G + A +L EM KG + L YN +I F G A++L + E+ + D V
Sbjct: 24 GNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTF 83
Query: 265 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
+ + F + EA + YK ++ T +T N +++ K + A + D M
Sbjct: 84 SALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMAS 143
Query: 325 NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISR 384
P+ TF+ ++N + + F + + + + Y +I
Sbjct: 144 KGCSPDVV-----TFSTLINGYCKAKRVDNGMEIF----CEMHRRGIVANTVTYTTLIHG 194
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
FC+ G L A+ L E+ S ++PD T ++
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 133/290 (45%), Gaps = 21/290 (7%)
Query: 157 SYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLRE 216
S+N ++ C+ V A ++ PF + +Y + G+ G + E +L+E
Sbjct: 223 SFNALLRCLCERSHVSAAKSVFNAKKGNIPF--DSCSYNIMISGWSKLGEVEEMEKVLKE 280
Query: 217 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG-VVNATYMEWFFNNG 275
M+ G G D L Y++LI G G ++ + E+FD +K + V D V NA M F +
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNA--MICNFISA 338
Query: 276 RD-KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 334
RD E+M Y+ ++D + + T + L+ L+K K + A +F++ML P V
Sbjct: 339 RDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLV 398
Query: 335 NSDTFNIMVNECFNLGKFHEALATF---RKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 391
S + + G H A+ + RKAG + + A+ + + +SRF + G+L
Sbjct: 399 TS-----FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKR----LSRFGKCGML 449
Query: 392 SEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+++E+ DV + ++D + +++A+ V + G
Sbjct: 450 L---NVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGF 496
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 165/390 (42%), Gaps = 36/390 (9%)
Query: 135 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 194
+ +A+ F++ +S ++N VI+ +++ L +I P+ VT+
Sbjct: 61 WQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTF 120
Query: 195 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL------ 248
R + K +++A + EA+D + L+ + D + NL+ E ++ +A EL
Sbjct: 121 RIVFKRYVTAHLVQEAIDAY-DKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNV 179
Query: 249 ------FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ-FKMTPVTCNV 301
K L+ G + + W+ G+ KE Y MD + + ++
Sbjct: 180 IGNGFSVSNTKIHNLILRG---WSKLGWW---GKCKE----YWKKMDTEGVTKDLFSYSI 229
Query: 302 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 361
++++ K GK +A L+ +M + A N+ I ++ G R+
Sbjct: 230 YMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG--IRVFREMRE 287
Query: 362 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYM 421
G + N VA +N II CE+G + +A + +E+ + PD T+ L +
Sbjct: 288 RGCEPN-------VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FS 337
Query: 422 KMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPT 481
++E+ + L +F RM+ +G+R + + + + + ++ M E PD
Sbjct: 338 RLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSA 397
Query: 482 CYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
Y VI L KG+LD + E +++ G+
Sbjct: 398 AYNAVIDALIQKGMLDMAREYEEEMIERGL 427
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 146/342 (42%), Gaps = 26/342 (7%)
Query: 107 ARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHC 166
AR + VF + A RA +EA F+ + I P + + ++++ C
Sbjct: 128 AREYNYFEISSKVFW--IVFRAYSRANLPSEACRAFNRM-VEFGIKPCVDDLDQLLHSLC 184
Query: 167 DEGRVDVALELYRHIIATAPFG--PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA 224
D+ V+ A E + FG PSA TY L +G+ A + EML +
Sbjct: 185 DKKHVNHAQEFFG---KAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVV 241
Query: 225 DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY 284
D L YN L+ + G++D ++F E+ L D A ++ + + G + +Y
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAG---DVHSAY 298
Query: 285 KSLMDR--QFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 340
K ++DR ++ + P T N +++ L K+ K A+ L D+M+ P+ NS
Sbjct: 299 K-VLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNS---- 353
Query: 341 IMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 400
IM C H + K ++ + D YN ++ G A ++E
Sbjct: 354 IMAYHC-----DHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG 408
Query: 401 LCSKSLSPDVPTHRTLIDAYMKME-RIDDALKVFHRMVDAGL 441
+ + P V T+ +I ++ + ++++A + F M+D G+
Sbjct: 409 MSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI 450
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+ S+ I+ +CD G V A ++ + P+ T+ H+ K ++ +A
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRM-KRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL-KERCLVYDGVVNATYMEWF 271
LL EM+ KG D+ YN++++ + +++A +L + + +CL N ++
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMV-LKLL 393
Query: 272 FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL-KHGKKTQAWALFDQMLDNHTPP 329
GR A + ++ + +R+F T T V++ L+ K GK +A F+ M+D PP
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%)
Query: 360 RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDA 419
RK + + +D+ YN ++ C++G + +F+E+ + L PD + I A
Sbjct: 228 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 287
Query: 420 YMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPD 479
Y + A KV RM L N + L KN+KV D +L +M ++ PD
Sbjct: 288 YCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD 347
Query: 480 PTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGD 532
Y ++ C ++++ +LL ++ R V ++ + GR D
Sbjct: 348 TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFD 400
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 139/332 (41%), Gaps = 32/332 (9%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGR-VDVAL 175
P + T N ++ A + K+ EA + + + P+ V+YN + + +G V
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKM-EECGVRPDTVTYNTIATCYVQKGETVRAES 244
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
E+ ++ P+ T + G+ GR+ + L +R M A+ +V+N+LI+G
Sbjct: 245 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNN-----GRDKEAMDSYKSLMDR 290
F+E+ + D +E V T + FN G K + + +
Sbjct: 305 FVEVMDRDGIDE---------------VTLTLLLMSFNEEVELVGNQKMKVQVLTLMKEC 349
Query: 291 QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLG 350
K +T + ++ G +A +F +M+ P+ A ++I+
Sbjct: 350 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA-----YSILAKGYVRAK 404
Query: 351 KFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 410
+ +A +S +V + +IS +C NG + +A +F ++C +SP++
Sbjct: 405 EPKKAEELLETLIVESRP-----NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 459
Query: 411 PTHRTLIDAYMKMERIDDALKVFHRMVDAGLR 442
T TL+ Y+++++ A +V M G++
Sbjct: 460 KTFETLMWGYLEVKQPWKAEEVLQMMRGCGVK 491
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/444 (20%), Positives = 185/444 (41%), Gaps = 30/444 (6%)
Query: 73 LPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRA 132
+ S+ V R L N LI G A +V + + RP++ + ++AAM
Sbjct: 37 VEGSSCRTVRSRTKLMN---VLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQ 93
Query: 133 KRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV 192
K+Y +I+ QS + + +N VIN + G ++ A++ + P+
Sbjct: 94 KQYG-SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM-KELGLNPTTS 151
Query: 193 TYRHLTKGFISAG---RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 249
TY L KG+ AG R E LDL+ E N G + +N L+ + + +++A E+
Sbjct: 152 TYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVV 211
Query: 250 DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSY--KSLMDRQFKMTPVTCNVLLEVLL 307
+++E + D V T + G A K +M + K TC +++
Sbjct: 212 KKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYC 271
Query: 308 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 367
+ G+ +M + N FN ++N F E + + G +
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVV-----FNSLIN------GFVEVM---DRDGI--D 315
Query: 368 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERID 427
+ + +N + + + TL +E ++ DV T+ T+++A+ ++
Sbjct: 316 EVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKEC---NVKADVITYSTVMNAWSSAGYME 372
Query: 428 DALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVI 487
A +VF MV AG++ + + + ++ + +L + + +P+ + VI
Sbjct: 373 KAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVI 431
Query: 488 RGLCAKGLLDKSLELLYQVMRYGV 511
G C+ G +D ++ + ++ ++GV
Sbjct: 432 SGWCSNGSMDDAMRVFNKMCKFGV 455
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 159/425 (37%), Gaps = 79/425 (18%)
Query: 155 IVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLL 214
+ S ++N + GR A +++ + T PS ++Y L + ++
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETG-HRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 215 REMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNN 274
E+ G DS+ +N +I+ F E GN++ A + ++KE L
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGL----------------- 146
Query: 275 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN---HTPPNF 331
T T N L++ GK ++ L D ML+ PN
Sbjct: 147 ------------------NPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 332 QAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG-- 389
+ TFN++V K EA +K D YN I + + + G
Sbjct: 189 R-----TFNVLVQAWCKKKKVEEAWEVVKKM----EECGVRPDTVTYNTIATCYVQKGET 239
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM----VDAGLRVVT 445
+ +E+E + + + + P+ T ++ Y + R+ D L+ RM V+A L V
Sbjct: 240 VRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFN 299
Query: 446 NFCN---RVFD--------------------ELIKNDKVIDCAHILSKMGERDPKPDPTC 482
+ N V D EL+ N K+ +L+ M E + K D
Sbjct: 300 SLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMK--VQVLTLMKECNVKADVIT 357
Query: 483 YEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNT 542
Y V+ + G ++K+ ++ ++++ GV + + + +A + E LL+
Sbjct: 358 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 417
Query: 543 PRYRP 547
RP
Sbjct: 418 VESRP 422
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 176/439 (40%), Gaps = 59/439 (13%)
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
NE A+ + F ++++ + V N VI++ EG V A E+ II T
Sbjct: 619 NETKAILNLMF-KTDLGSSAV--NRVISSFVREGDVSKA-EMIADIIIRLGLRMEEETIA 674
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGAD--SLVYNNLISGFLELGNLDKANELFDELK 253
L + ++ EA L L G V ++I ++ G L+ A LF E
Sbjct: 675 TLIAVYGRQHKLKEAKRLY---LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESA 731
Query: 254 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 313
E+ V + + N G+ +EA ++ +++ ++ V N L++ +L+ GK
Sbjct: 732 EKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQ 791
Query: 314 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVN---ECFNLGKFHEALATFRKAGTKSNSKA 370
A ++++M + P + Q T+N M++ L K E + R++G
Sbjct: 792 CASEIYERMHTSGVPCSIQ-----TYNTMISVYGRGLQLDKAIEIFSNARRSG------- 839
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP---------------------- 408
+D Y N+I + + G +SEA +LF E+ K + P
Sbjct: 840 LYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVD 899
Query: 409 -------------DVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDEL 455
D+ T+ TLI Y + + +A K + + G+ + + + + L
Sbjct: 900 ELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSAL 959
Query: 456 IKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTN 515
+K + + KM E PD C +++G G +K + +++R V
Sbjct: 960 VKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDR 1019
Query: 516 SLREFVTEVFKKAGRGDEI 534
+ V +++K G+ ++
Sbjct: 1020 FVSSVVEDLYKAVGKEQDV 1038
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 149/341 (43%), Gaps = 20/341 (5%)
Query: 202 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
+ G + E +L M G+ ++ N +IS F+ G++ KA + D + L +
Sbjct: 613 LKEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLGLRMEE 670
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNV--LLEVLLKHGKKTQAWALF 319
AT + + + KEA Y + + + TP + +++ ++ G A+ LF
Sbjct: 671 ETIATLIAVYGRQHKLKEAKRLYLAAGESK---TPGKSVIRSMIDAYVRCGWLEDAYGLF 727
Query: 320 DQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 379
+ + P + T +I+VN N GK EA R K+ +D GYN
Sbjct: 728 MESAEKGCDPG-----AVTISILVNALTNRGKHREAEHISRTCLEKN----IELDTVGYN 778
Query: 380 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDA 439
+I E G L A ++E + + + + T+ T+I Y + ++D A+++F +
Sbjct: 779 TLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRS 838
Query: 440 GLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKS 499
GL + + K K+ + + S+M ++ KP Y ++++ +CA L
Sbjct: 839 GLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHE 897
Query: 500 LELLYQVMRYGVGVTNSLREFVT--EVFKKAGRGDEIERLL 538
++ L Q M G L ++T +V+ ++ + E E+ +
Sbjct: 898 VDELLQAMERN-GRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/393 (18%), Positives = 162/393 (41%), Gaps = 19/393 (4%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+ V+ ++ T+ GR L Y+ + ++V Y + + +D
Sbjct: 221 PDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSV-YNFMLSSLQKKSFHGKVID 279
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L EM+ +G + Y ++S + + G ++A + F E+K V + V ++ +
Sbjct: 280 LWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSV 339
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
G ++A+ Y+ + + + TC +L + K +A +LF M N P + +
Sbjct: 340 KAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPAD-E 398
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
+ +++ LG FH+A + F ++ D Y + +G +
Sbjct: 399 VIR----GLIIRIYGKLGLFHDAQSMFE----ETERLNLLADEKTYLAMSQVHLNSGNVV 450
Query: 393 EAETLFEELCSKSLSPDVPTHR----TLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFC 448
+A + E + ++ D+P R ++ Y K++ +D A + F + GL ++ C
Sbjct: 451 KALDVIEMMKTR----DIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASS-C 505
Query: 449 NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
N + + + + + ++ D Y+ +R C +G++ ++ +L+ ++ R
Sbjct: 506 NDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGR 565
Query: 509 YGVGVTNSLREFVTEVFKKAGRGDEIERLLDFN 541
N + + E + D+ E +L+ +
Sbjct: 566 EARVKDNRFVQTLAESMHIVNKHDKHEAVLNVS 598
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 153/370 (41%), Gaps = 59/370 (15%)
Query: 112 FSSTRPTVF----TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCD 167
F+ PTV NA++ R+ ++++A L Q VP+++S+N +IN
Sbjct: 214 FTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAM-RQRGCVPDLISFNTLINARLK 272
Query: 168 EGRV--DVALELYRHIIATAPFGPSAVTYRHLTKG------------------------- 200
G + ++A+EL ++ + P A+TY L
Sbjct: 273 SGGLTPNLAVELL-DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPD 331
Query: 201 ----------FISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFD 250
+ G EA L E+ KG D++ YN+L+ F N +K E++
Sbjct: 332 LWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQ 391
Query: 251 ELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM-TPVTCNVLLEVLLKH 309
++++ D + T + + G+ A+ YK + + +T VL++ L K
Sbjct: 392 QMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA 451
Query: 310 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFR---KAGTKS 366
+ +A AL +MLD P Q T++ ++ GK EA TF ++GTK
Sbjct: 452 NRTVEAAALMSEMLDVGIKPTLQ-----TYSALICGYAKAGKREEAEDTFSCMLRSGTKP 506
Query: 367 NSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERI 426
++ A+++ + +++ R E +A L+ ++ S +P + +I MK R
Sbjct: 507 DNLAYSVML----DVLLRGNET---RKAWGLYRDMISDGHTPSYTLYELMILGLMKENRS 559
Query: 427 DDALKVFHRM 436
DD K M
Sbjct: 560 DDIQKTIRDM 569
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 160/407 (39%), Gaps = 18/407 (4%)
Query: 135 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 194
+ A+ +F + + PN ++ + +A+E++ A G Y
Sbjct: 171 WQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTR--AEPTVGDRVQVY 228
Query: 195 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNL--DKANELFDEL 252
+ + +G+ +A +L+ M +G D + +N LI+ L+ G L + A EL D +
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 253 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 312
+ L D + T + + A+ ++ + + + T N ++ V + G
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 313 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 372
+A LF ++ P+ NS + N K E +K G F
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARER--NTEKVKEVYQQMQKMG-------FG 399
Query: 373 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS---PDVPTHRTLIDAYMKMERIDDA 429
D YN II + + G L A L++++ K LS PD T+ LID+ K R +A
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDM--KGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 430 LKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRG 489
+ M+D G++ + + K K + S M KPD Y V++
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDV 517
Query: 490 LCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIER 536
L K+ L ++ G + +L E + K R D+I++
Sbjct: 518 LLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQK 564
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 54/257 (21%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFT--QSNIVPNIVSYNNVINTHCDEGRVDV 173
+P+ T I+ M ++YN L H FF Q + +PN ++Y ++NT EG+ D
Sbjct: 625 KPSPVTYGLIMEVMLACEKYN----LVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDE 680
Query: 174 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI 233
A+ + + G +A+ Y L + SAGR E L++L+++ + + Y LI
Sbjct: 681 AVHTVEDMESRGIVGSAALYY-DLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLI 739
Query: 234 SGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK 293
++ GN+ A +FD++K+ C
Sbjct: 740 QACVDSGNIKNAAYIFDQMKKVC------------------------------------- 762
Query: 294 MTP--VTCNVLLEVLLKHGKKTQAWALFDQMLD--NHTP--PNFQAV---NSDTFNIMVN 344
+P VTCN++L+ L+ G +A LF +M + NH +F++ ++ TFN M++
Sbjct: 763 -SPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLD 821
Query: 345 ECFNLGKFHEALATFRK 361
C K+ + +R+
Sbjct: 822 TCAEQEKWDDFGYAYRE 838
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 123/309 (39%), Gaps = 37/309 (11%)
Query: 161 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 220
+I + G VD A+EL+ + T + Y L A L+R M+ K
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 221 GHGADSLVYNNLISGFLELGNLDKANELFDELKERC---------LVYDGVVNATYMEWF 271
G D Y L++G+ G + +A E DE+ R L+ +G++NA Y+E
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLE-- 269
Query: 272 FNNGRDKEAMDSYKSLMDRQFKMTPV----TCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
S K ++ + K V T N+L+E + K G+ ++ +T
Sbjct: 270 -----------SAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMY------YT 312
Query: 328 PPNFQ-AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 386
V+ DT+ ++ +GK EA + K F + Y II C
Sbjct: 313 ACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC-VEDGHKPFP---SLYAPIIKGMC 368
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTN 446
NG+ +A + F ++ K+ P+ P + LI + + DA M + GL ++
Sbjct: 369 RNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISR 428
Query: 447 FCNRVFDEL 455
+ V D L
Sbjct: 429 CFDMVTDGL 437
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 154/362 (42%), Gaps = 30/362 (8%)
Query: 187 FGPSAVTYRHLTKGFISAGRIVEALDLLREM--LNKGHGADSLVYNNLISGFLELGNLDK 244
+ P+++ Y L K S + +L++M L+ ++L + +I + + G++D+
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCF--IIEQYGKNGHVDQ 164
Query: 245 ANELFDEL------KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 298
A ELF+ + ++ VY+ +++A F+ A + ++ + K T
Sbjct: 165 AVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHG-----AYALIRRMIRKGLKPDKRT 219
Query: 299 CNVLLEVLLKHGKKTQAWALFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
+L+ GK +A D+M PP + ++++ N G A
Sbjct: 220 YAILVNGWCSAGKMKEAQEFLDEMSRRGFNPP------ARGRDLLIEGLLNAGYLESA-- 271
Query: 358 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
++ +K F D+ +N +I ++G + ++ C L D+ T++TLI
Sbjct: 272 --KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLI 329
Query: 418 DAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPK 477
A K+ +ID+A ++ + V+ G + + + + +N D S M +
Sbjct: 330 PAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHP 389
Query: 478 PDPTCYEVVIRGLCAKG--LLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIE 535
P+ Y ++I +C +G +D + L ++ G+ + + VT+ K G+ D
Sbjct: 390 PNRPVYTMLIT-MCGRGGKFVDAA-NYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAM 447
Query: 536 RL 537
R+
Sbjct: 448 RI 449
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 96/238 (40%), Gaps = 8/238 (3%)
Query: 302 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 361
L + L H K W + QM D ++ +T ++ + G +A+ F
Sbjct: 117 LAKSLASHKKYESMWKILKQMKDLSLD-----ISGETLCFIIEQYGKNGHVDQAVELFNG 171
Query: 362 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYM 421
K+ +DV YN+++ C+ + A L + K L PD T+ L++ +
Sbjct: 172 V-PKTLGCQQTVDV--YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 422 KMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPT 481
++ +A + M G + + + L+ + ++SKM + PD
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 482 CYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
+ ++I + G ++ +E+ Y + G+ V + + K G+ DE RLL+
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLN 346
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Query: 100 LDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYN 159
++ S+ R S P VF N ++ + N+A+ +FH + PN +Y+
Sbjct: 269 METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYD 328
Query: 160 NVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 219
+I+ C +GR A EL + F P+ +Y L F +G I +A+ L EM+
Sbjct: 329 YLIHGLCAQGRTINARELLSEMKGKG-FVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE 387
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV----YDGVVNATYME 269
G D + Y L+ G D+A L + L+E+ LV YD +VN + +
Sbjct: 388 NGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKD 441
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 11/218 (5%)
Query: 86 NLHNRVQ-SLIRAGDLDAASSVARHSTFSST---RPTVFTCNAIIAAM-------YRAKR 134
NL+N + +AG L A ++ RH S RPT+ T + + A+ Y
Sbjct: 208 NLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHV 267
Query: 135 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 194
Y E + S I P++ + N ++ + V+ AL ++ + P++ TY
Sbjct: 268 YMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTY 327
Query: 195 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 254
+L G + GR + A +LL EM KG + YN+L++ F G +D A + E+ E
Sbjct: 328 DYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE 387
Query: 255 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQF 292
V D + T ++ G+ EA + L ++Q
Sbjct: 388 NGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL 425
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 30/249 (12%)
Query: 311 KKTQAWALFDQMLD--NHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 368
+K A ++ +M D N N + +N ++ GK A+ FR T N
Sbjct: 180 RKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNL 239
Query: 369 KA----------FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLID 418
+ F + NN + + + +LF ++ + PDV L+
Sbjct: 240 ECRPTIRTYHILFKALLGRGNN---SYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVK 296
Query: 419 AYMKMERIDDALKVFHRMVDAGLRVVTNFC---NRVFDELI----KNDKVIDCAHILSKM 471
Y+ ++DAL++FH+M V C + +D LI + I+ +LS+M
Sbjct: 297 GYVLSLHVNDALRIFHQM------SVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEM 350
Query: 472 GERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTN-SLREFVTEVFKKAGR 530
+ P+ Y ++ G +D +++ L++++ G V S R V E +K G+
Sbjct: 351 KGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRK-GK 409
Query: 531 GDEIERLLD 539
DE RLL+
Sbjct: 410 YDEATRLLE 418
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 167/423 (39%), Gaps = 41/423 (9%)
Query: 150 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 209
VPN+V + + VD AL L+R + PS Y L G V
Sbjct: 167 QFVPNMVHITQSLKIVKE---VDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVG 223
Query: 210 ALDLLREML--NKGHGADSL-VYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 266
L EM+ + HG S YN +I + L+ A F + +E D
Sbjct: 224 IQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNN 283
Query: 267 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 326
M F N G +A + Y+S+ + T +++ L K G+ A+ LF QM +
Sbjct: 284 LMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERK 343
Query: 327 TPPNFQAVNS-----------DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV 375
P+F +S DT + E G H AT + S +KA +D
Sbjct: 344 LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG--HRPSATMFVSLIDSYAKAGKLDT 401
Query: 376 A-----------------GYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLID 418
A Y II ++G L A T+F+++ P T+ L++
Sbjct: 402 ALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLE 461
Query: 419 AYMKMERIDDALKVFHRMVDAGLR-VVTNFCNRVFDELIKNDKVIDCA-HILSKMGERDP 476
+ ++D A+K+++ M +AGLR ++++ + + L+ N +++D A IL +M
Sbjct: 462 MHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL--TLLANKRLVDVAGKILLEMKAMGY 519
Query: 477 KPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIER 536
D C V+ +D +L+ L + G+ N + + E K G D
Sbjct: 520 SVD-VCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARP 578
Query: 537 LLD 539
LL+
Sbjct: 579 LLE 581
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/420 (19%), Positives = 162/420 (38%), Gaps = 48/420 (11%)
Query: 85 LNLHNRV-QSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFH 143
N +N+V Q L +A L+ A + + S + T N ++ +A ++
Sbjct: 243 FNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYE 302
Query: 144 FFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFIS 203
+++ + + +Y +I + GR+D A +L++ + PS + L
Sbjct: 303 SM-EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM-KERKLRPSFSVFSSLVDSMGK 360
Query: 204 AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 263
AGR+ ++ + EM GH + ++ +LI + + G LD A L+DE+K+ + +
Sbjct: 361 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL 420
Query: 264 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 323
+E +G+ + AM +K + F TP T + LLE+ G+ A +++ M
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT 480
Query: 324 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 383
+ P ++ Y ++++
Sbjct: 481 NAGLRPG--------------------------------------------LSSYISLLT 496
Query: 384 RFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRV 443
L+ A + E+ + S DV L+ Y+K +D ALK M +G++
Sbjct: 497 LLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIKDASVDLALKWLRFMGSSGIKT 555
Query: 444 VTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
++F+ +KN +L + K D Y ++ L DK +L+
Sbjct: 556 NNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLM 615
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 149/349 (42%), Gaps = 53/349 (15%)
Query: 197 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLEL----GNLDKANELFDEL 252
L FI R + + E+L D + + + + L G + A++LFDE+
Sbjct: 89 LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEM 148
Query: 253 KE-RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKH 309
E C NA + + N+ + EAM ++K L ++ +TP VT N +++ L +
Sbjct: 149 PELNCERTVKSFNA-LLSAYVNSKKLDEAMKTFKELPEK-LGITPDLVTYNTMIKALCRK 206
Query: 310 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSK 369
G ++F+++ N P+ + FN ++ E + F E + SK
Sbjct: 207 GSMDDILSIFEELEKNGFEPDLIS-----FNTLLEEFYRRELFVEG----DRIWDLMKSK 257
Query: 370 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDA 429
+ ++ YN+ + N ++A L + + ++ +SPDV T+ LI AY +++
Sbjct: 258 NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEV 317
Query: 430 LKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRG 489
+K ++ M + GL PD Y ++I
Sbjct: 318 MKCYNEMKEKGL-----------------------------------TPDTVTYCMLIPL 342
Query: 490 LCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLL 538
LC KG LD+++E+ + +++ + ++ + V E AG+ DE +L+
Sbjct: 343 LCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 34/235 (14%)
Query: 118 TVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL-- 175
TV + NA+++A +K+ +EA+ F + I P++V+YN +I C +G +D L
Sbjct: 156 TVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSI 215
Query: 176 ---------------------ELYRH-----------IIATAPFGPSAVTYRHLTKGFIS 203
E YR ++ + P+ +Y +G
Sbjct: 216 FEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTR 275
Query: 204 AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 263
+ +AL+L+ M +G D YN LI+ + NL++ + ++E+KE+ L D V
Sbjct: 276 NKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVT 335
Query: 264 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWAL 318
+ G A++ + + + P ++E L+ GK +A L
Sbjct: 336 YCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 3/172 (1%)
Query: 81 VGPRLNLHNR-VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAI 139
+ P L +N +++L R G +D S+ + P + + N ++ YR + + E
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 248
Query: 140 ALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTK 199
++ ++ N+ PNI SYN+ + + AL L ++ T P TY L
Sbjct: 249 RIWDLMKSK-NLSPNIRSYNSRVRGLTRNKKFTDALNLI-DVMKTEGISPDVHTYNALIT 306
Query: 200 GFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 251
+ + E + EM KG D++ Y LI + G+LD+A E+ +E
Sbjct: 307 AYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 180/487 (36%), Gaps = 102/487 (20%)
Query: 68 PNAPRLPDSTSALVGPRLNLHNRVQSLIRA----GDLDAASSVARHSTFSSTRPTVFTCN 123
P +P +P ++S N H R+ SL L + +T+ T+F
Sbjct: 28 PLSPHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYG 87
Query: 124 AIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHC--DEGRVDVALELYRHI 181
I+ N A +F S+ + +N +I C D R + A LYR +
Sbjct: 88 KILQLSSSFSDVNYAFRVFDSIENHSSFM-----WNTLIRA-CAHDVSRKEEAFMLYRKM 141
Query: 182 IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGN 241
+ P T+ + K E + +++ G G D V N LI + G
Sbjct: 142 LERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 201
Query: 242 LDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNV 301
LD A ++FDE+ ER LV W N
Sbjct: 202 LDLARKVFDEMPERSLV----------SW-----------------------------NS 222
Query: 302 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 361
+++ L++ G+ A LF +M + P + T +++ C LG +L T+
Sbjct: 223 MIDALVRFGEYDSALQLFREMQRSFEPDGY------TMQSVLSACAGLGSL--SLGTWAH 274
Query: 362 AGTKSNSKA-FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY 420
A AMDV N++I +C+ G L AE +F+ + + D+ + +I +
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR----DLASWNAMILGF 330
Query: 421 MKMERIDDALKVFHRMVD------------AGLRVVTN---FCNR---VFDELIKN---- 458
R ++A+ F RMVD GL + N F N+ FD ++++
Sbjct: 331 ATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIE 390
Query: 459 ----------DKVIDCAHI---LSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQ 505
D + +I + + KPD + ++ C KG S+EL +
Sbjct: 391 PALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG---ASVELSEE 447
Query: 506 VMRYGVG 512
+ R +G
Sbjct: 448 IARNIIG 454
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 12/301 (3%)
Query: 144 FFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFIS 203
F Q ++ YN +I + + A EL+ +++ P TY L + S
Sbjct: 494 FICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYG-VTPDKCTYNTLVQILAS 552
Query: 204 AGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 263
A + L +M G+ +D + Y +IS F++LG L+ A E++ E+ E + D VV
Sbjct: 553 ADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVV 612
Query: 264 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 323
+ F + G ++AM +++ + V N L+++ K G +A A++ ++L
Sbjct: 613 YGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL 672
Query: 324 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF--RKAGTKSNSKAFAMDVAGYNNI 381
+ + V T N M+N +A A F K ++N FAM + Y
Sbjct: 673 QSCNKTQYPDVY--TSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYK-- 728
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+NG EA + +++ + D ++ +++ + R +A++ F MV +G+
Sbjct: 729 -----KNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGI 783
Query: 442 R 442
+
Sbjct: 784 Q 784
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 178/422 (42%), Gaps = 23/422 (5%)
Query: 124 AIIAAMYR-AKRYNEAIALFHFFFTQSN-----IVPNIVSYNNVINTHCDEGRVDVALEL 177
I+ MY+ A+ + +A F + N + + +YN +I+T+ G++ A E
Sbjct: 261 GIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASET 320
Query: 178 YRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA-DSLVYNNLISGF 236
++ ++ P+ VT+ + + + G++ E L++ M K H A D+ YN LIS
Sbjct: 321 FKRMLEEGIV-PTTVTFNTMIHIYGNNGQLGEVTSLMKTM--KLHCAPDTRTYNILISLH 377
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ ++++A F E+K+ L D V T + F +EA + D ++
Sbjct: 378 TKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDE 437
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
T + L + ++ ++W+ F + H N ++S+ ++ ++ G EA
Sbjct: 438 YTQSALTRMYVEAEMLEKSWSWFKRF---HVAGN---MSSEGYSANIDAYGERGYLSEAE 491
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
F + +V IS+ CE +A LFE + S ++PD T+ TL
Sbjct: 492 RVFICCQEVNKRTVIEYNVMIKAYGISKSCE-----KACELFESMMSYGVTPDKCTYNTL 546
Query: 417 IDAYMKMERIDDALKVFHRMVDAG-LRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
+ + +M + G + +C V +K ++ + +M E +
Sbjct: 547 VQILASADMPHKGRCYLEKMRETGYVSDCIPYC-AVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIE 535
+PD Y V+I G + +++ + + G+ + + + +++ K G DE E
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 536 RL 537
+
Sbjct: 666 AI 667
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 118/309 (38%), Gaps = 40/309 (12%)
Query: 135 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 194
+ A+ +F +F ++ N++ YN ++ + L+ +I P TY
Sbjct: 167 WERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKG-IKPINSTY 225
Query: 195 RHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE 254
L + G V AL L +M G D + ++ + + KA E F K
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFK--KW 283
Query: 255 RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQ 314
C D+ DS+ L + T N +++ K G+ +
Sbjct: 284 SC--------------------DENKADSHVCL-------SSYTYNTMIDTYGKSGQIKE 316
Query: 315 AWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMD 374
A F +ML+ P + TFN M++ N G+ E + K+ A D
Sbjct: 317 ASETFKRMLEEGIVPT-----TVTFNTMIHIYGNNGQLGEVTSLM-----KTMKLHCAPD 366
Query: 375 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFH 434
YN +IS +N + A F+E+ L PD ++RTL+ A+ +++A +
Sbjct: 367 TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426
Query: 435 RMVDAGLRV 443
M D + +
Sbjct: 427 EMDDDNVEI 435
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 156/377 (41%), Gaps = 19/377 (5%)
Query: 72 RLPDSTSALVGPRLNLHNRVQSLIR----AGDLDAASSV-ARHSTFSSTRPTVFTCNAII 126
R+ + + G +L N V ++R AG+ + A + R F + T + N ++
Sbjct: 139 RMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE-SMNLLL 197
Query: 127 AAMYRAKRYNEA-IALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA 185
+ + KR +A + L +S+I PN ++N I+ C RV+ AL + +
Sbjct: 198 DTLCKEKRVEQARVVLLQL---KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 186 PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 245
F P ++Y + + + ++ ++L EM G +S+ Y ++S ++A
Sbjct: 255 -FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 246 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM-DRQFKMTPVTCNVLLE 304
+ +K D + + GR +EA ++ M + + T N ++
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 305 VLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGT 364
+ H ++ +A L +M N + T+ ++ CF G E ++ T
Sbjct: 374 MYCHHDEEDKAIELLKEM----ESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 365 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKME 424
K + ++D + Y +I R C + A LFEE+ S+ ++P T L++ K
Sbjct: 430 KHH---LSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKN 486
Query: 425 RIDDALKVFHRMVDAGL 441
+ A ++ H M L
Sbjct: 487 MHESAERIEHIMKTVKL 503
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 156/377 (41%), Gaps = 19/377 (5%)
Query: 72 RLPDSTSALVGPRLNLHNRVQSLIR----AGDLDAASSV-ARHSTFSSTRPTVFTCNAII 126
R+ + + G +L N V ++R AG+ + A + R F + T + N ++
Sbjct: 139 RMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE-SMNLLL 197
Query: 127 AAMYRAKRYNEA-IALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATA 185
+ + KR +A + L +S+I PN ++N I+ C RV+ AL + +
Sbjct: 198 DTLCKEKRVEQARVVLLQL---KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 186 PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 245
F P ++Y + + + ++ ++L EM G +S+ Y ++S ++A
Sbjct: 255 -FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 246 NELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLM-DRQFKMTPVTCNVLLE 304
+ +K D + + GR +EA ++ M + + T N ++
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 305 VLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGT 364
+ H ++ +A L +M N + T+ ++ CF G E ++ T
Sbjct: 374 MYCHHDEEDKAIELLKEM----ESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 365 KSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKME 424
K + ++D + Y +I R C + A LFEE+ S+ ++P T L++ K
Sbjct: 430 KHH---LSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKN 486
Query: 425 RIDDALKVFHRMVDAGL 441
+ A ++ H M L
Sbjct: 487 MHESAERIEHIMKTVKL 503
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 130/347 (37%), Gaps = 62/347 (17%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRA-------KRYNEAIALFH 143
++S + + ++D A V R + TCNA+I + R K Y E L
Sbjct: 169 IKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDD 228
Query: 144 FFFTQSN-----IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLT 198
++ I PN ++N+++ + EG ++ ++R + P+ +Y L
Sbjct: 229 VSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLM 288
Query: 199 KGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER--- 255
+ + + G + EA + EM +G D + YN +I G + KA ELF ++ +
Sbjct: 289 EAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIE 348
Query: 256 --CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 313
CL Y+ +VN + G + Y+ + + F+ +T L+E L
Sbjct: 349 CTCLTYEHLVNG-----YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQ 403
Query: 314 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 373
+ D + D AV F N C+ L
Sbjct: 404 RVVEAADIVKD--------AVREAMFYPSRN-CYEL------------------------ 430
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY 420
++ R CE+G + A + E+ K P T+R ID Y
Sbjct: 431 -------LVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGY 470
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 144/355 (40%), Gaps = 50/355 (14%)
Query: 167 DEGRVDVALELYRHIIATA-PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGAD 225
DE RV L+++R +I + G + + L K + + I A+ ++R++ ++G A
Sbjct: 140 DEDRV---LKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINA- 195
Query: 226 SLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYK 285
+ N L E+ R +G Y E F G D ++D K
Sbjct: 196 ---------------QISTCNALITEVSRRRGASNGY--KMYREVF---GLDDVSVDEAK 235
Query: 286 SLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN-HTPPNFQAVNSDTFNIMVN 344
++ + K T N ++ + G+ ++ +M + PN ++N+++
Sbjct: 236 KMIGK-IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY-----SYNVLME 289
Query: 345 ECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSK 404
G EA K + + D+ YN +I C N + +A+ LF ++ K
Sbjct: 290 AYCARGLMSEA----EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLK 345
Query: 405 SLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--------VVTNFCNRVFDELI 456
+ T+ L++ Y K +D L V+ M G +V C+
Sbjct: 346 GIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDR----- 400
Query: 457 KNDKVIDCAHILSK-MGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
+V++ A I+ + E P CYE++++ LC G +D++L + +++ G
Sbjct: 401 DGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG 455
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
++ P+IV Y N+++ + + G++ A +L R + F P+A Y L + R+
Sbjct: 280 EAGFEPDIVDYTNLLSGYANAGKMADAYDLLRD-MRRRGFEPNANCYTVLIQALCKVDRM 338
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
EA+ + EM AD + Y L+SGF + G +DK + D++ ++ L+ + TY
Sbjct: 339 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL---TY 395
Query: 268 MEWFFNNGRDKEAMDSYKSLMD--RQFKMTPV--TCNVLLEVLLKHGKKTQAWALFDQML 323
M + + KE+ + LM+ RQ + P NV++ + K G+ +A L+++M
Sbjct: 396 MHIMVAHEK-KESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEME 454
Query: 324 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 365
+N P DTF IM+N + G EA F++ T+
Sbjct: 455 ENGLSPGV-----DTFVIMINGLASQGCLLEASDHFKEMVTR 491
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 121/298 (40%), Gaps = 17/298 (5%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+ + +++ C G V A +L+ + P T L G+ G+++EA
Sbjct: 216 PDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFT--SLLYGWCRVGKMMEAKY 273
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
+L +M G D + Y NL+SG+ G + A +L +++ R + ++
Sbjct: 274 VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 333
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
R +EAM + + + + VT L+ K GK + + + D M+ P+
Sbjct: 334 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPS-- 391
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKA---GTKSNSKAFAMDVAGYNNIISRFCENG 389
+IMV HE +F + K + D+ YN +I C+ G
Sbjct: 392 --ELTYMHIMVA--------HEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLG 441
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNF 447
+ EA L+ E+ LSP V T +I+ + +A F MV GL V+ +
Sbjct: 442 EVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQY 499
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 99/236 (41%), Gaps = 45/236 (19%)
Query: 302 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 361
LL+ L KHG A LF+ M P N + S ++ C +GK EA +
Sbjct: 224 LLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTS----LLYGWC-RVGKMMEA----KY 273
Query: 362 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYM 421
+ N F D+ Y N++S + G +++A L ++ + P+ + LI A
Sbjct: 274 VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 333
Query: 422 KMERIDDALKVFHRM--------VDAGLRVVTNFCNR--------VFDELIKN------- 458
K++R+++A+KVF M V +V+ FC V D++IK
Sbjct: 334 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393
Query: 459 ------------DKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
+ +C ++ KM + + PD Y VVIR C G + +++ L
Sbjct: 394 TYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 17/287 (5%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
YNN++++ G V+ LY ++ P T+ L G+ G +VEA + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDL-VSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
+ G D Y + I+G +D A ++F E+ + + V + F +
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
EA+ + D T VL++ L G+K++A LF QM ++ P +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP-----DDC 296
Query: 338 TFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
+ +++ + EA L + G N V YN +I FC+ + +A
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPN-------VITYNALIKGFCKKN-VHKA 348
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
L ++ ++L PD+ T+ TLI +D A ++ M ++GL
Sbjct: 349 MGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 123/315 (39%), Gaps = 55/315 (17%)
Query: 194 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
Y +L G + E L EML D +N L++G+ +LG + +A +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQ------ 176
Query: 254 ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT 313
Y+ W G D + +Y S + + V
Sbjct: 177 -------------YVTWLIQAGCDPDYF-TYTSFITGHCRRKEVD--------------- 207
Query: 314 QAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM 373
A+ +F +M N N ++ ++ F K EAL+ K +
Sbjct: 208 AAFKVFKEMTQNGCHRN-----EVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCP---- 258
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
+V Y +I C +G SEA LF+++ + PD + LI ++ + +D+A +
Sbjct: 259 NVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL 318
Query: 434 HRMVDAGL--RVVTNFCNRVFDELIK---NDKVIDCAHILSKMGERDPKPDPTCYEVVIR 488
M++ GL V+T ++ LIK V +LSKM E++ PD Y +I
Sbjct: 319 EHMLENGLMPNVIT------YNALIKGFCKKNVHKAMGLLSKMLEQNLVPDLITYNTLIA 372
Query: 489 GLCAKGLLDKSLELL 503
G C+ G LD + LL
Sbjct: 373 GQCSSGNLDSAYRLL 387
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
R ++DAA V + T + + +I ++ AK+ +EA++L N PN+
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLL-VKMKDDNCCPNV 260
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
+Y +I+ C G+ A+ L++ ++ + P Y L + F S + EA LL
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQ-MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 268
ML G + + YN LI GF + N+ KA L ++ E+ LV D + T +
Sbjct: 320 HMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLI 371
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 15/224 (6%)
Query: 291 QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLG 350
++K+TP N LL L + G + L+ +ML++ P+ TFN +VN LG
Sbjct: 115 KYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIY-----TFNTLVNGYCKLG 169
Query: 351 KFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 407
EA + +AG D Y + I+ C + A +F+E+
Sbjct: 170 YVVEAKQYVTWLIQAGCDP-------DYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCH 222
Query: 408 PDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHI 467
+ ++ LI + ++ID+AL + +M D + D L + + + ++
Sbjct: 223 RNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNL 282
Query: 468 LSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+M E KPD Y V+I+ C+ LD++ LL ++ G+
Sbjct: 283 FKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGL 326
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
D+ +N +++ +C+ G + EA+ L PD T+ + I + + + +D A KVF
Sbjct: 154 DIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVF 213
Query: 434 HRMVDAGL-RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCA 492
M G R ++ ++ L + K+ + +L KM + + P+ Y V+I LC
Sbjct: 214 KEMTQNGCHRNEVSYTQLIYG-LFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 493 KGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLD 539
G +++ L Q+ G+ + + + + F DE LL+
Sbjct: 273 SGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 3/218 (1%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P FT + I R K + A +F TQ+ N VSY +I + ++D AL
Sbjct: 188 PDYFTYTSFITGHCRRKEVDAAFKVFKEM-TQNGCHRNEVSYTQLIYGLFEAKKIDEALS 246
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L + P+ TY L +G+ EA++L ++M G D +Y LI F
Sbjct: 247 LLVKM-KDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSF 305
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
LD+A+ L + + E L+ + + ++ F K AM ++++
Sbjct: 306 CSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHK-AMGLLSKMLEQNLVPDL 364
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 334
+T N L+ G A+ L M ++ PN + V
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 17/249 (6%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+ VS+N+VI + G++D+AL L+R + +A+++ + G++ A EAL
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMAE-----KNAISWTTMISGYVQADMNKEALQ 233
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L EM N D++ N +S +LG L++ + L + + D V+ ++ +
Sbjct: 234 LFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYA 293
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
G +EA++ +K++ + + L+ HG +A + F +M PN
Sbjct: 294 KCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVI 349
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
TF ++ C G E F N K + Y I+ GLL
Sbjct: 350 -----TFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP---TIEHYGCIVDLLGRAGLLD 401
Query: 393 EAETLFEEL 401
EA+ +E+
Sbjct: 402 EAKRFIQEM 410
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 128/347 (36%), Gaps = 46/347 (13%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L ++ + DA + R + + R +I +A ++AI +FH T +
Sbjct: 88 IYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI-TSFD 146
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
V I S N +IN D G ++ A + P++V++ L KGF+ A
Sbjct: 147 CVRTIQSLNTLINVLVDNGELEKAKSFFDGA-KDMRLRPNSVSFNILIKGFLDKCDWEAA 205
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+ EML + YN+LI ++ KA L +++ ++ + + V M+
Sbjct: 206 CKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKG 265
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
G EA + R K V +L+ L K G+ +A L +M P
Sbjct: 266 LCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP- 324
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
DV YN +++ C
Sbjct: 325 -------------------------------------------DVVIYNILVNHLCTECR 341
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMV 437
+ EA + E+ K P+ T+R +ID + ++E D L V + M+
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAML 388
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 132/307 (42%), Gaps = 19/307 (6%)
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 268
EAL L + G D Y++LI + N D +++ ++ R + + +
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 328
+ + G +A+D + + T + N L+ VL+ +G+ +A + FD D
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 329 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV----AGYNNIISR 384
PN S +FNI++ + + A F + M+V YN++I
Sbjct: 184 PN-----SVSFNILIKGFLDKCDWEAACKVF--------DEMLEMEVQPSVVTYNSLIGF 230
Query: 385 FCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR-V 443
C N + +A++L E++ K + P+ T L+ ++A K+ M G +
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 444 VTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
+ N+ + +L K ++ + +L +M +R KPD Y +++ LC + + ++ +L
Sbjct: 291 LVNY-GILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVL 349
Query: 504 YQVMRYG 510
++ G
Sbjct: 350 TEMQMKG 356
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 129/303 (42%), Gaps = 10/303 (3%)
Query: 202 ISAGRIVEALD-LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 260
++ R +A+D +LR + + ++ LI + + G++DKA ++F ++ V
Sbjct: 91 LAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRT 150
Query: 261 GVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD 320
T + +NG ++A + D + + V+ N+L++ L A +FD
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFD 210
Query: 321 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN 380
+ML+ P+ NS + N+ ++GK L K + N+ F + + G
Sbjct: 211 EMLEMEVQPSVVTYNSLIGFLCRND--DMGKAKSLLEDMIKKRIRPNAVTFGLLMKG--- 265
Query: 381 IISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
C G +EA+ L ++ + P + + L+ K RID+A + M
Sbjct: 266 ----LCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRR 321
Query: 441 LRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSL 500
++ N + + L +V + +L++M + KP+ Y ++I G C D L
Sbjct: 322 IKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGL 381
Query: 501 ELL 503
+L
Sbjct: 382 NVL 384
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 123/314 (39%), Gaps = 19/314 (6%)
Query: 86 NLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFF 145
+L+ + L+ G+L+ A S + RP + N +I + A +F
Sbjct: 153 SLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM 212
Query: 146 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 205
+ + P++V+YN++I C + A L +I P+AVT+ L KG G
Sbjct: 213 L-EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMI-KKRIRPNAVTFGLLMKGLCCKG 270
Query: 206 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 265
EA L+ +M +G + Y L+S + G +D+A L E+K+R + D V+
Sbjct: 271 EYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYN 330
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP---VTCNVLLEVLLKHGKKTQAWALFDQM 322
+ R EA Y+ L + Q K T ++++ + + + M
Sbjct: 331 ILVNHLCTECRVPEA---YRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAM 387
Query: 323 LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNII 382
L + P TF MV G A G K+ + + N++
Sbjct: 388 LASRHCP-----TPATFVCMVAGLIKGGNLDHACFVLEVMGKKN----LSFGSGAWQNLL 438
Query: 383 SRFC--ENGLLSEA 394
S C + G+ EA
Sbjct: 439 SDLCIKDGGVYCEA 452
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 375 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFH 434
+ N +I+ +NG L +A++ F+ L P+ + LI ++ + A KVF
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFD 210
Query: 435 RMVDAGLR--VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCA 492
M++ ++ VVT N + L +ND + +L M ++ +P+ + ++++GLC
Sbjct: 211 EMLEMEVQPSVVTY--NSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCC 268
Query: 493 KGLLDKSLELLYQVMRYGV--GVTNSLREFVTEVFKKAGRGDEIERLL-DFNTPRYRP 547
KG +++ +L++ + G G+ N + K GR DE + LL + R +P
Sbjct: 269 KGEYNEAKKLMFDMEYRGCKPGLVNY--GILMSDLGKRGRIDEAKLLLGEMKKRRIKP 324
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 140/358 (39%), Gaps = 48/358 (13%)
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+P + S N +++ +GRVD+AL YR + P+ T + G+ +G++ +
Sbjct: 199 FLPTVESCNAYMSSLLGQGRVDIALRFYREM-RRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++LL++M G A + YN LI+G E G L A +L
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL---------------------- 295
Query: 271 FFNNGRDKEAMDSYKSLMDRQ-FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
K++M + + VT N L+ + K +A +F +M + P
Sbjct: 296 --------------KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
N+ T+N ++N G HE F + D+ YN +I C+
Sbjct: 342 -----NTVTYNTLINGYSQQGD-HEMAFRFYEDMV---CNGIQRDILTYNALIFGLCKQA 392
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCN 449
+A +EL ++L P+ T LI + D +++ M+ +G N
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFN 452
Query: 450 RVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
+ +N+ + +L +M R D V GL +G D+ ++ L Q M
Sbjct: 453 MLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG-KDQLVKKLLQEM 509
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 15/286 (5%)
Query: 228 VYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSL 287
V+++L F L A + F ++K+ + YM GR A+ Y+ +
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 288 MDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECF 347
+ P T N+++ + GK + L M F+A + ++ C
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM----ERLGFRATDVSYNTLIAGHC- 284
Query: 348 NLGKFHEALA---TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSK 404
G AL K+G + N V +N +I FC L EA +F E+ +
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPN-------VVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 405 SLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDC 464
+++P+ T+ TLI+ Y + + A + + MV G++ N + L K K
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 465 AHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
A + ++ + + P+ + + +I G C + D+ EL ++R G
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 140/358 (39%), Gaps = 48/358 (13%)
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+P + S N +++ +GRVD+AL YR + P+ T + G+ +G++ +
Sbjct: 199 FLPTVESCNAYMSSLLGQGRVDIALRFYREM-RRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++LL++M G A + YN LI+G E G L A +L
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL---------------------- 295
Query: 271 FFNNGRDKEAMDSYKSLMDRQ-FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
K++M + + VT N L+ + K +A +F +M + P
Sbjct: 296 --------------KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
N+ T+N ++N G HE F + D+ YN +I C+
Sbjct: 342 -----NTVTYNTLINGYSQQGD-HEMAFRFYEDMV---CNGIQRDILTYNALIFGLCKQA 392
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCN 449
+A +EL ++L P+ T LI + D +++ M+ +G N
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFN 452
Query: 450 RVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
+ +N+ + +L +M R D V GL +G D+ ++ L Q M
Sbjct: 453 MLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG-KDQLVKKLLQEM 509
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 15/286 (5%)
Query: 228 VYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSL 287
V+++L F L A + F ++K+ + YM GR A+ Y+ +
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 288 MDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECF 347
+ P T N+++ + GK + L M F+A + ++ C
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM----ERLGFRATDVSYNTLIAGHC- 284
Query: 348 NLGKFHEALA---TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSK 404
G AL K+G + N V +N +I FC L EA +F E+ +
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPN-------VVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 405 SLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDC 464
+++P+ T+ TLI+ Y + + A + + MV G++ N + L K K
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 465 AHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
A + ++ + + P+ + + +I G C + D+ EL ++R G
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 148/355 (41%), Gaps = 19/355 (5%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV-EALDLLRE 216
YN I+ R D A E+Y + + P VT L AGR E ++ +
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVY-PDNVTCAILITTLRKAGRSAKEVWEIFEK 334
Query: 217 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 276
M KG V+ L+ F + G ++A + E++++ + + +V T M+ + +
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH 394
Query: 277 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 336
+E + + D+ K + T N+L++ + + L +M D PN +
Sbjct: 395 IEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK---- 450
Query: 337 DTFNIMVNECFNLGKFHE----ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
++ +++ K + A +K G K +S + Y +I + +G
Sbjct: 451 -SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHS-------YTALIHAYSVSGWHE 502
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
+A FEE+C + + P V T+ +++DA+ + ++++ M+ ++ N +
Sbjct: 503 KAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLL 562
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVM 507
D K I+ ++S+ + +P Y +++ A+G D L L + M
Sbjct: 563 DGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAY-ARGGQDAKLPQLLKEM 616
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 120/324 (37%), Gaps = 52/324 (16%)
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L LL + +K D +YN ISG D A E++
Sbjct: 258 LLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVY--------------------- 296
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKT-QAWALFDQMLDNHTPP 329
EAMD D VTC +L+ L K G+ + W +F++M +
Sbjct: 297 --------EAMDKINVYPDN------VTCAILITTLRKAGRSAKEVWEIFEKMSEKGVK- 341
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALAT---FRKAGTKSNSKAFAMDVAGYNNIISRFC 386
+ D F +V + G EAL K G +SN+ YN ++ +
Sbjct: 342 ----WSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIV-------YNTLMDAYN 390
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTN 446
++ + E E LF E+ K L P T+ L+DAY + + D + M D GL
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 447 FCNRVFDELIKNDKVID-CAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQ 505
+ + K+ D A +M + KP Y +I G +K+ +
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 506 VMRYGVGVTNSLREFVTEVFKKAG 529
+ + G+ + V + F+++G
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSG 534
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 147/362 (40%), Gaps = 83/362 (22%)
Query: 201 FISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 260
++ GR EAL + + M S+ YN +ISG+L G + A +LFDE+ ER LV
Sbjct: 74 YMRTGRCNEALRVFKRMPR----WSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSW 129
Query: 261 GVVNATYMEWFFNNGRDKE------------------------AMDSYKSLMDRQFKMTP 296
V+ Y+ N G+ +E +D +S+ DR +
Sbjct: 130 NVMIKGYVR-NRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND 188
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
V+ N LL +++ K +A LF + N+ V ++N ++ K EA
Sbjct: 189 VSWNALLSAYVQNSKMEEACMLF------KSRENWALV---SWNCLLGGFVKKKKIVEAR 239
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
F + DV +N II+ + ++G + EA LF+E S DV T +
Sbjct: 240 QFFDSMNVR--------DVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAM 287
Query: 417 IDAYMKMERIDDALKVFHRM----------VDAG------------------LRVVTNFC 448
+ Y++ +++A ++F +M + AG R V+ +
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW- 346
Query: 449 NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
N + + K+ + ++ KM PK DP + +I G G ++L L Q+ R
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKM----PKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 509 YG 510
G
Sbjct: 403 EG 404
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 160/400 (40%), Gaps = 83/400 (20%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
+ + N ++ + K+ EA FF N V ++VS+N +I + G++D A
Sbjct: 219 LVSWNCLLGGFVKKKKIVEA----RQFFDSMN-VRDVVSWNTIITGYAQSGKIDEA---- 269
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
R + +P T+ + G+I + EA RE+ +K + + +N +++G+++
Sbjct: 270 RQLFDESPV-QDVFTWTAMVSGYIQNRMVEEA----RELFDKMPERNEVSWNAMLAGYVQ 324
Query: 239 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 298
++ A ELFD + R + + Y + G+ EA K+L D+ K PV+
Sbjct: 325 GERMEMAKELFDVMPCRNVSTWNTMITGYAQ----CGKISEA----KNLFDKMPKRDPVS 376
Query: 299 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC-----FNLGK-F 352
++ + G +A LF QM +N +F+ ++ C LGK
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQM-----EREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 353 HEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 412
H L K G ++ G N ++ +C+ G + EA LF+E+ K D+ +
Sbjct: 432 HGRLV---KGGYETGC------FVG-NALLLMYCKCGSIEEANDLFKEMAGK----DIVS 477
Query: 413 HRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMG 472
T+I Y + + AL+ F M GL
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFESMKREGL------------------------------- 506
Query: 473 ERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR-YGV 511
KPD V+ GL+DK + Y + + YGV
Sbjct: 507 ----KPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 126/320 (39%), Gaps = 49/320 (15%)
Query: 89 NRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQ 148
N V+ RAG++ A V + + P V+T + +I A+ R + + A +F
Sbjct: 260 NLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML-D 318
Query: 149 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 208
S PN +++NN++ H GR + L++Y
Sbjct: 319 SGCAPNAITFNNLMRVHVKAGRTEKVLQVY------------------------------ 348
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL-KERCLVYDGVVNATY 267
+M G D++ YN LI NL+ A ++ + + K++C V N +
Sbjct: 349 ------NQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIF 402
Query: 268 MEWFFNNGRDKE-AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 326
+ RD A Y +M+ + + VT N+L+ + + + +M D
Sbjct: 403 R--YIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKE 460
Query: 327 TPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFC 386
PN +T+ ++V +G ++ A F++ K ++ Y ++++
Sbjct: 461 VEPNV-----NTYRLLVTMFCGMGHWNNAYKLFKEM---VEEKCLTPSLSLYEMVLAQLR 512
Query: 387 ENGLLSEAETLFEELCSKSL 406
G L + E L E++ K L
Sbjct: 513 RAGQLKKHEELVEKMIQKGL 532
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 139/345 (40%), Gaps = 46/345 (13%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREM 217
YN +I+ + D+A L ++ + S T+ L + ++ AG EA+ M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLI-DLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 218 LNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD 277
+ G D + ++ +IS +A FD LK+R D +V + + G
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEI 271
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
EA +K + + T +++++ L + G+ ++A +F MLD+ PN +
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPN-----AI 326
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
TFN NL + H KAG + YN + CE
Sbjct: 327 TFN-------NLMRVHV------KAGRTEKV------LQVYNQMKKLGCE---------- 357
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
PD T+ LI+A+ + E +++A+KV + M+ V + N +F + K
Sbjct: 358 ----------PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEK 407
Query: 458 NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
V + SKM E +P+ Y +++R D L++
Sbjct: 408 KRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 16/230 (6%)
Query: 290 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 349
R +++ T +L+ ++ G ++A F++M D P+ A F+I+++
Sbjct: 180 RNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIA-----FSIVISNLSRK 234
Query: 350 GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 409
+ EA + F S F DV Y N++ +C G +SEAE +F+E+ + P+
Sbjct: 235 RRASEAQSFF-----DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPN 289
Query: 410 VPTHRTLIDAYMKMERIDDALKVFHRMVDAGL---RVVTNFCNRVFDELIKNDKVIDCAH 466
V T+ +IDA + +I A VF M+D+G + N RV + + +KV+ +
Sbjct: 290 VYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYN 349
Query: 467 ILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNS 516
+ K+G +PD Y +I C L+ ++++L +++ V S
Sbjct: 350 QMKKLG---CEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAS 396
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/397 (19%), Positives = 157/397 (39%), Gaps = 52/397 (13%)
Query: 118 TVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALEL 177
++ T +I RA +EA+ F+ VP+ ++++ VI+ + R A
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRM-EDYGCVPDKIAFSIVISNLSRKRRASEAQSF 243
Query: 178 YRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFL 237
+ + F P + Y +L +G+ AG I EA + +EM G + Y+ +I
Sbjct: 244 FDSL--KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC 301
Query: 238 ELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 297
G + +A+++F ++ + + + M GR ++ + Y + + +
Sbjct: 302 RCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTI 361
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIM---VNECFNLGKFHE 354
T N L+E + A + + M+ VN+ TFN + + + ++ H
Sbjct: 362 TYNFLIEAHCRDENLENAVKVLNTMIKKKCE-----VNASTFNTIFRYIEKKRDVNGAHR 416
Query: 355 ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
+ +A + N+ YN ++ F + + +E+ K + P+V T+R
Sbjct: 417 MYSKMMEAKCEPNT-------VTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYR 469
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGER 474
L+ + M ++A K+F MV+ E+
Sbjct: 470 LLVTMFCGMGHWNNAYKLFKEMVE----------------------------------EK 495
Query: 475 DPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
P + YE+V+ L G L K EL+ ++++ G+
Sbjct: 496 CLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 147/363 (40%), Gaps = 56/363 (15%)
Query: 122 CNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI 181
C + + ++ ++ + + +F + Q +P+ Y+ +I+ +G+ +A+ L+ +
Sbjct: 100 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM 159
Query: 182 IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADS-----LVYNNLISGF 236
+ P A Y L + +AL+ +R L+K G + + YN L+ F
Sbjct: 160 -KNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 237 LELGNLDKANELFDELKER-----CLVYDGVVNA-------TYMEWFFNNGRDKEA---- 280
+ G +D+ N LF +L ++GV++A ME R E
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 281 ------MDSY-------------KSLMDRQFKMTPVTCNVLLEVLLKHGKKT---QAWAL 318
+DSY KSLM + K T T N ++ + +GK +A +
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMI---INYGKARMIDKAEWV 335
Query: 319 FDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGY 378
F +M D + P+F + + +M C G A F + G + +
Sbjct: 336 FKKMNDMNYIPSF--ITYECMIMMYGYC---GSVSRAREIFEEVGESDR----VLKASTL 386
Query: 379 NNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD 438
N ++ +C NGL EA+ LF + + PD T++ L AY K + + + +M
Sbjct: 387 NAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEK 446
Query: 439 AGL 441
G+
Sbjct: 447 DGI 449
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 185/495 (37%), Gaps = 85/495 (17%)
Query: 68 PNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAI-- 125
P++ R D S++ P+ H ++ + GD AR ST T TC AI
Sbjct: 8 PSSLRFSDFISSI--PKETDHKWLRFSVNLGD-------ARRST-----RTRITCGAISS 53
Query: 126 ---IAAMYRAKRYNEAI--ALFHFFFTQSNIVPNIVSYNNVINT-HC-----DEGRVDV- 173
+A A+R N + +L + +V + Y V+ HC + G+ D
Sbjct: 54 RRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKW 113
Query: 174 --ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNN 231
LE++R + + P Y L G+ A+ L EM N G D+ VYN
Sbjct: 114 LQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNA 173
Query: 232 LISGFLELGN----LDKANELFDELK--ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYK 285
LI+ L + L+K D++K ERC
Sbjct: 174 LITAHLHTRDKAKALEKVRGYLDKMKGIERC----------------------------- 204
Query: 286 SLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE 345
+ VT N+LL + GK Q ALF + + P+ TFN +++
Sbjct: 205 -------QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY-----TFNGVMDA 252
Query: 346 CFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS 405
G E A T+ S D+ +N +I + + + E F+ L
Sbjct: 253 YGKNGMIKEMEAVL----TRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 406 LSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDELIKNDKVID 463
P +PT ++I Y K ID A VF +M D +T C + + V
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS--VSR 366
Query: 464 CAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTE 523
I ++GE D + ++ C GL ++ +L + + V S +F+ +
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 524 VFKKAGRGDEIERLL 538
+ KA ++++ L+
Sbjct: 427 AYTKADMKEQVQILM 441
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 185/431 (42%), Gaps = 78/431 (18%)
Query: 113 SSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVD 172
++T +F CN+ I+ R EA A+F +S IVS+ +I+ + + G++
Sbjct: 44 TTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRS-----IVSWIAMISAYAENGKMS 98
Query: 173 VALELYRHI----------IATAPFG-----------------PSAVTYRHLTKGFISAG 205
A +++ + + TA +AV+Y + GF+ AG
Sbjct: 99 KAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAG 158
Query: 206 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 265
R EA L E K DS+ N L+SG+L G ++A +F + V + V +
Sbjct: 159 RFDEAEFLYAETPVKFR--DSVASNVLLSGYLRAGKWNEAVRVFQGMA----VKEVVSCS 212
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
+ + + GR +A +SL DR + +T +++ K G + LF +M
Sbjct: 213 SMVHGYCKMGRIVDA----RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQE 268
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAM----DVAGYNNI 381
VNS+T +M C + ++ E G++ + M D+ N++
Sbjct: 269 GDVK----VNSNTLAVMFKACRDFVRYRE--------GSQIHGLVSRMPLEFDLFLGNSL 316
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+S + + G + EA+ +F + +K D + +LI ++ ++I +A ++F +M G
Sbjct: 317 MSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEKM--PGK 370
Query: 442 RVVTNFCNRVFDELIK----NDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLD 497
+V+ + ++IK ++ C + M P+ D + +I + G +
Sbjct: 371 DMVS------WTDMIKGFSGKGEISKCVELFGMM----PEKDNITWTAMISAFVSNGYYE 420
Query: 498 KSLELLYQVMR 508
++L +++++
Sbjct: 421 EALCWFHKMLQ 431
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 103/258 (39%), Gaps = 25/258 (9%)
Query: 183 ATAPFG----PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
A A FG +V++ L G + +I EA +L +M G D + + ++I GF
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVSWTDMIKGFSG 384
Query: 239 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVT 298
G + K ELF + E+ D + + F +NG +EA+ + ++ ++ T
Sbjct: 385 KGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT 440
Query: 299 CNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 358
+ +L + + +++ + + NS M +C N ++ +
Sbjct: 441 FSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNS--LVSMYCKCGNTNDAYKIFSC 498
Query: 359 FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLID 418
+ ++ YN +IS + NG +A LF L S P+ T L+
Sbjct: 499 ISEP-----------NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLS 547
Query: 419 AYMKMERIDDALKVFHRM 436
A + + +D K F M
Sbjct: 548 ACVHVGYVDLGWKYFKSM 565
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 30/243 (12%)
Query: 274 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 333
NG +EA ++ + +R + V+ ++ ++GK ++AW +FD+M P
Sbjct: 63 NGNLQEAEAIFRQMSNR----SIVSWIAMISAYAENGKMSKAWQVFDEM-----PVRVTT 113
Query: 334 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 393
+ M+ +LGK +E + S Y +I+ F G E
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNAVS-----------YATMITGFVRAGRFDE 162
Query: 394 AETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFD 453
AE L+ E K D L+ Y++ + ++A++VF M A VV+ C+ +
Sbjct: 163 AEFLYAETPVK--FRDSVASNVLLSGYLRAGKWNEAVRVFQGM--AVKEVVS--CSSMVH 216
Query: 454 ELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGV 513
K +++D + +M ER + + +I G G + L ++ + G
Sbjct: 217 GYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVK 272
Query: 514 TNS 516
NS
Sbjct: 273 VNS 275
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 114/257 (44%), Gaps = 10/257 (3%)
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKH-GKKTQAWALFDQMLDNHTPPNFQAVNS 336
++ + ++ +++ F P N +L+VL+ H G +A+ LF + PN ++ N
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 337 DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAET 396
+M C N + L+ + K + DV Y +I FC G ++ A
Sbjct: 196 ----LMQAFCLN-----DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAME 246
Query: 397 LFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELI 456
L +++ +K PD ++ TL+++ + ++ +A K+ RM G N +
Sbjct: 247 LLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFC 306
Query: 457 KNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNS 516
+ D+ +D +L M P+ Y +I GLC +G+ D+ + L +++ G S
Sbjct: 307 REDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS 366
Query: 517 LREFVTEVFKKAGRGDE 533
+ + + F G+ +E
Sbjct: 367 VSNCLVKGFCSFGKVEE 383
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 45/249 (18%)
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
++PN SYN ++ C + +A +L+ ++ P +Y+ L +GF G++ A
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV-PDVDSYKILIQGFCRKGQVNGA 244
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
++LL +MLNKG D L Y L++ L +A +L +K + D V T +
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
F R+ AMD+ K L D ML N P
Sbjct: 305 F---CREDRAMDARKVL--------------------------------DDMLSNGCSP- 328
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
NS ++ ++ + G F E +K + SK F+ + N ++ FC G
Sbjct: 329 ----NSVSYRTLIGGLCDQGMFDEG----KKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 380
Query: 391 LSEAETLFE 399
+ EA + E
Sbjct: 381 VEEACDVVE 389
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 9/257 (3%)
Query: 89 NRVQSLIRA--GDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
NR+ ++ + G L A + + S P + N ++ A + A LF
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 206
+ ++VP++ SY +I C +G+V+ A+EL ++ F P ++Y L +
Sbjct: 218 -ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG-FVPDRLSYTTLLNSLCRKTQ 275
Query: 207 IVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNAT 266
+ EA LL M KG D + YN +I GF A ++ D++ + V T
Sbjct: 276 LREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 335
Query: 267 YMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH 326
+ + G E + ++ + F N L++ GK +A + + ++ N
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Query: 327 TPPNFQAVNSDTFNIMV 343
+ ++SDT+ +++
Sbjct: 396 -----ETLHSDTWEMVI 407
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 107/249 (42%), Gaps = 27/249 (10%)
Query: 300 NVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF 359
N+L++ + + A+ LF +ML+ P+ D++ I++ G+ + A+
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV-----DSYKILIQGFCRKGQVNGAMELL 248
Query: 360 RKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDA 419
+K F D Y +++ C L EA L + K +PD+ + T+I
Sbjct: 249 ----DDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 420 YMKMERIDDALKVFHRMVDAGLR--------VVTNFCNR-VFDELIKNDKVIDCAHILSK 470
+ + +R DA KV M+ G ++ C++ +FDE K L +
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKK---------YLEE 355
Query: 471 MGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGR 530
M + P + +++G C+ G ++++ +++ VM+ G + + E V +
Sbjct: 356 MISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE 415
Query: 531 GDEIERLLD 539
++I+ L+
Sbjct: 416 SEKIKLFLE 424
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 15/239 (6%)
Query: 205 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVN 264
G + +A +L + G ++ YN L+ F +L A +LF ++ ER +V D
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 265 ATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLD 324
++ F G+ AM+ ++++ F ++ LL L + + +A+ L +M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRM-- 286
Query: 325 NHTPPNFQAVNSDT--FNIMVNECFNLGKFHEALAT-FRKAGTKSNSKAFAMDVAGYNNI 381
+ N D +N M+ LG E A RK S + + Y +
Sbjct: 287 -----KLKGCNPDLVHYNTMI-----LGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
I C+ G+ E + EE+ SK SP L+ + ++++A V ++ G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 10/218 (4%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+Q+ DL A + P V + +I R + N A+ L +
Sbjct: 197 MQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNK-G 255
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
VP+ +SY ++N+ C + ++ A +L + P V Y + GF R ++A
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRM-KLKGCNPDLVHYNTMILGFCREDRAMDA 314
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
+L +ML+ G +S+ Y LI G + G D+ + +E+ + V+ ++
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 271 FFNNGRDKEAMDSYKSLM--------DRQFKMTPVTCN 300
F + G+ +EA D + +M D + P+ CN
Sbjct: 375 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 412
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 160/399 (40%), Gaps = 50/399 (12%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P T + + K+ ++A LF ++ + P I Y ++I+ + +D A
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSE-GLKPTIDVYTSLISVYGKSELLDKAFS 200
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
++ + + P T+ L GR ++ EM G G ++ YN +I G+
Sbjct: 201 TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY 260
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKS---LMDRQFK 293
+ G ++ + ++ E V + + NGR+ M+S+ S LM Q
Sbjct: 261 GKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPD 320
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 353
+T T N+L+ K G + ++ D M F ++ + T+NI++
Sbjct: 321 IT--TFNILILSFGKAGMYKKMCSVMDFM-----EKRFFSLTTVTYNIVIE--------- 364
Query: 354 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
TF KAG + + + +F ++ + + P+ T+
Sbjct: 365 ----TFGKAGR--------------------------IEKMDDVFRKMKYQGVKPNSITY 394
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGE 473
+L++AY K + V ++V++ + + T F N + + + + + +M E
Sbjct: 395 CSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEE 454
Query: 474 RDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG 512
R KPD + +I+ A G+ D EL Q++ +G
Sbjct: 455 RKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDIG 493
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 144/347 (41%), Gaps = 21/347 (6%)
Query: 101 DAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNN 160
D AS + +PT+ ++I+ +++ ++A + + + S+ P++ ++
Sbjct: 161 DQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTV 220
Query: 161 VINTHCDEGRVDVALELYRHIIATAPF---GPSAVTYRHLTKGFISAGRIVEALDLLREM 217
+I+ C GR D L + I+ + G S VTY + G+ AG E +L +M
Sbjct: 221 LISCCCKLGRFD----LVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADM 276
Query: 218 LNKGHGA-DSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 276
+ G D N++I + N+ K + + + D + F G
Sbjct: 277 IEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGM 336
Query: 277 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV-- 334
K+ + R F +T VT N+++E K G+ ++M D +Q V
Sbjct: 337 YKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGR-------IEKMDDVFRKMKYQGVKP 389
Query: 335 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
NS T+ +VN G + + R+ NS +D +N II+ + + G L+
Sbjct: 390 NSITYCSLVNAYSKAGLVVKIDSVLRQI---VNSDV-VLDTPFFNCIINAYGQAGDLATM 445
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL 441
+ L+ ++ + PD T T+I Y D ++ +M+ + +
Sbjct: 446 KELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDI 492
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 154/387 (39%), Gaps = 44/387 (11%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVAL 175
+P V +I + + K+ +A LF + +V + V Y +++ + GR D A
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEV-YTALVSAYSRSGRFDAAF 205
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
L + ++ P TY L K F+ + DLL +M +G +++ YN LI
Sbjct: 206 TLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
Query: 236 FLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT 295
+ KA ++F E++ +T ++ G D DS+
Sbjct: 266 Y------GKA-KMFVEME-----------STLIQML---GEDDCKPDSW----------- 293
Query: 296 PVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
T N L +G+ +++ + PN + TFNI+++ G + +
Sbjct: 294 --TMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIR-----TFNILLDSYGKSGNYKKM 346
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
A ++ + YN +I F G L + E LF + S+ + P T +
Sbjct: 347 SAVMEYM----QKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCS 402
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERD 475
L+ AY + + D V + ++ +R+ F N + D + +K + +L M ++
Sbjct: 403 LVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKG 462
Query: 476 PKPDPTCYEVVIRGLCAKGLLDKSLEL 502
KPD Y +++ G+ EL
Sbjct: 463 FKPDKITYRTMVKAYRISGMTTHVKEL 489
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 145/390 (37%), Gaps = 47/390 (12%)
Query: 138 AIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHL 197
++ F + + + P VS N + D V A + + T F P
Sbjct: 96 SLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAA----KSFLDTTGFKPEPTLLEQY 151
Query: 198 TKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL--------F 249
K G + EA+++ + + G + + N+++ G L+ LD+ EL F
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF 211
Query: 250 DELKERCLVY----DGVVNATYMEWFFNNGRDKEAMD----SYKSLMDRQFKMTPVTCNV 301
D + RCL+ G V+ Y G K+ +D Y L+ ++ C
Sbjct: 212 DSERIRCLIRALCDGGDVSEGYE--LLKQGL-KQGLDPGQYVYAKLISGFCEIGNYAC-- 266
Query: 302 LLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRK 361
+ EVL AW NH P + I+ C N K EA F+
Sbjct: 267 MSEVL----HTMIAW--------NHFPSMYIYQK-----IIKGLCMN-KKQLEAYCIFKN 308
Query: 362 AGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYM 421
K +A D Y +I FCE G L A L+ E+ K + P+ + +I +
Sbjct: 309 L----KDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHF 364
Query: 422 KMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPT 481
K I ++ M+ G CN + + K + I M E P+
Sbjct: 365 KRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAI 424
Query: 482 CYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
Y +I+G C + ++K L+L ++ G+
Sbjct: 425 TYNALIKGFCKENKVEKGLKLYKELKALGL 454
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 132/373 (35%), Gaps = 49/373 (13%)
Query: 70 APRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAM 129
A D+T P L L V+ L G ++ A V +V TCN+++
Sbjct: 132 AKSFLDTTGFKPEPTL-LEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGC 190
Query: 130 YRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGP 189
+A++ + L H +S + +I CD G V EL + + P
Sbjct: 191 LKARKLDRFWEL-HKEMVESEFDSERI--RCLIRALCDGGDVSEGYELLKQGLKQG-LDP 246
Query: 190 SAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELF 249
Y L GF G ++L M+ H +Y +I G +A +F
Sbjct: 247 GQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIF 306
Query: 250 DELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKH 309
LK++ D VV T + F G A + ++ + + NV++ K
Sbjct: 307 KNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKR 366
Query: 310 GKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSK 369
G+ + A +++ML N + N+
Sbjct: 367 GEISLVEAFYNEMLRNGYGGTMLSCNT--------------------------------- 393
Query: 370 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDA 429
+I FC +G EA +F+ + ++P+ T+ LI + K +++
Sbjct: 394 -----------MIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKG 442
Query: 430 LKVFHRMVDAGLR 442
LK++ + GL+
Sbjct: 443 LKLYKELKALGLK 455
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 133/359 (37%), Gaps = 58/359 (16%)
Query: 137 EAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRH 196
EAI +++ I ++V+ N+V+ ++D EL++ ++ + F + R
Sbjct: 163 EAIEVYNVL-KDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES-EFDSERI--RC 218
Query: 197 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKE-- 254
L + G + E +LL++ L +G VY LISGF E+GN +E+ +
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 255 ---RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 311
+Y ++ M N + EA +K+L D+ + V ++ + G
Sbjct: 279 HFPSMYIYQKIIKGLCM-----NKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGW 333
Query: 312 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 371
A L+ +M+ K G + N A
Sbjct: 334 LGSARKLWFEMI-------------------------------------KKGMRPNEFA- 355
Query: 372 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALK 431
YN +I + G +S E + E+ + + T+I + + D+A +
Sbjct: 356 ------YNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFE 409
Query: 432 VFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
+F M + G+ N + K +KV + ++ KP Y ++R L
Sbjct: 410 IFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 147/363 (40%), Gaps = 56/363 (15%)
Query: 122 CNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI 181
C + + ++ ++ + + +F + Q +P+ Y+ +I+ +G+ +A+ L+ +
Sbjct: 100 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM 159
Query: 182 IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADS-----LVYNNLISGF 236
+ P A Y L + +AL+ +R L+K G + + YN L+ F
Sbjct: 160 -KNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 237 LELGNLDKANELFDELKER-----CLVYDGVVNA-------TYMEWFFNNGRDKEA---- 280
+ G +D+ N LF +L ++GV++A ME R E
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 281 ------MDSY-------------KSLMDRQFKMTPVTCNVLLEVLLKHGKKT---QAWAL 318
+DSY KSLM + K T T N ++ + +GK +A +
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMI---INYGKARMIDKAEWV 335
Query: 319 FDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGY 378
F +M D + P+F + + +M C G A F + G + +
Sbjct: 336 FKKMNDMNYIPSF--ITYECMIMMYGYC---GSVSRAREIFEEVGESDR----VLKASTL 386
Query: 379 NNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD 438
N ++ +C NGL EA+ LF + + PD T++ L AY K + + + +M
Sbjct: 387 NAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEK 446
Query: 439 AGL 441
G+
Sbjct: 447 DGI 449
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 185/495 (37%), Gaps = 85/495 (17%)
Query: 68 PNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAI-- 125
P++ R D S++ P+ H ++ + GD AR ST T TC AI
Sbjct: 8 PSSLRFSDFISSI--PKETDHKWLRFSVNLGD-------ARRST-----RTRITCGAISS 53
Query: 126 ---IAAMYRAKRYNEAI--ALFHFFFTQSNIVPNIVSYNNVINT-HC-----DEGRVDV- 173
+A A+R N + +L + +V + Y V+ HC + G+ D
Sbjct: 54 RRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKW 113
Query: 174 --ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNN 231
LE++R + + P Y L G+ A+ L EM N G D+ VYN
Sbjct: 114 LQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNA 173
Query: 232 LISGFLELGN----LDKANELFDELK--ERCLVYDGVVNATYMEWFFNNGRDKEAMDSYK 285
LI+ L + L+K D++K ERC
Sbjct: 174 LITAHLHTRDKAKALEKVRGYLDKMKGIERC----------------------------- 204
Query: 286 SLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE 345
+ VT N+LL + GK Q ALF + + P+ TFN +++
Sbjct: 205 -------QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY-----TFNGVMDA 252
Query: 346 CFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS 405
G E A T+ S D+ +N +I + + + E F+ L
Sbjct: 253 YGKNGMIKEMEAVL----TRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 406 LSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGL--RVVTNFCNRVFDELIKNDKVID 463
P +PT ++I Y K ID A VF +M D +T C + + V
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS--VSR 366
Query: 464 CAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTE 523
I ++GE D + ++ C GL ++ +L + + V S +F+ +
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 524 VFKKAGRGDEIERLL 538
+ KA ++++ L+
Sbjct: 427 AYTKADMKEQVQILM 441
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 171/431 (39%), Gaps = 70/431 (16%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P+ + +++ C G V A +++ + F P+ + L G+ G+++EA +
Sbjct: 200 PDEYVFGCLLDALCKNGSVKEASKVFEDM--REKFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL-----VYDGVVNATY 267
+L +M G D +V+ NL+SG+ G + A +L +++++R Y ++ A
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
R EAM + + + VT L+ K G + +++ D M
Sbjct: 318 R----TEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
P+ IMV +F E L K + D+ YN +I C+
Sbjct: 374 MPS----QVTYMQIMVAH-EKKEQFEECLELIEKMKRRGCHP----DLLIYNVVIRLACK 424
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNF 447
G + EA L+ E+ + LSP V T +I+ + + +A F MV G+ +
Sbjct: 425 LGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQY 484
Query: 448 --CNRVFDELIKNDKV--------------------------------------IDCAHI 467
+ + L+++DK+ C++
Sbjct: 485 GTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYC 544
Query: 468 LSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSL--ELLYQVMRYGVGVTNSLREFVTEVF 525
L M E D P P Y +++GL L ++++ E+ +V++ S RE +++
Sbjct: 545 LDMM-EMDLMPQPNTYAKLMKGL--NKLYNRTIAAEITEKVVKMA-----SEREMSFKMY 596
Query: 526 KKAGRGDEIER 536
KK G D IE+
Sbjct: 597 KKKGEEDLIEK 607
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 361 KAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY 420
KA +SK + ++ Y+ +IS C+ G + E+ T +E+ + L+PDV + LI+A
Sbjct: 383 KAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEAC 442
Query: 421 MKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDP 480
K E I A K++ M G ++ N + +L + + + + KM ER +PD
Sbjct: 443 CKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDE 502
Query: 481 TCYEVVIRGLCAKGLLDKSLELLYQVMR--YGVGVTNSLREFVTEVFKKAGRGD 532
T Y +I GLC + ++ ++E+ + M + L EFV + G+
Sbjct: 503 TIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGE 556
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 159/402 (39%), Gaps = 32/402 (7%)
Query: 138 AIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHL 197
A+ F++ Q + +SY+++ + + L++ + + S+V YR L
Sbjct: 65 ALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSV-YRSL 123
Query: 198 TKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL 257
+ + A +L E + G V N L++G G D A +LF +++ + +
Sbjct: 124 IDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGV 183
Query: 258 VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMT-PVTCNVLLEVLLKHGKKTQAW 316
+ + Y+ WF + + + + + + ++L L K ++ A+
Sbjct: 184 SLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAF 243
Query: 317 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECF----NLGKFHEALATFRKAGT---KSNSK 369
+ +++ + P+F A ++ E F NL + L RK G S+ +
Sbjct: 244 YILEELRNIDCKPDFMAYR------VIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYR 297
Query: 370 AFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDA 429
AF +D+ L+EA+ + E + S D LI + ++ D A
Sbjct: 298 AFILDLISAKR----------LTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDP-DSA 346
Query: 430 LKVFHRMVDAGLRVVTNFCNRVFDELIKNDK---VIDCAHILSKMGERDPKPDPTCYEVV 486
++ MV G +++ L ++DK +I +LS G + Y ++
Sbjct: 347 VEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKG---YFSELQSYSLM 403
Query: 487 IRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKA 528
I LC G + +S L ++ + G+ SL + E KA
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKA 445
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 159/363 (43%), Gaps = 40/363 (11%)
Query: 158 YNNVINTHCDEGRVDVALELYRHIIATAPFG--PSAVTYRHLTKGFISAGRIVEALDLLR 215
+N++I++ G ++ AL Y ++ FG P T+ L K + A + + +D L
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLC---FGVSPDVSTFPCLVKACV-ALKNFKGIDFLS 161
Query: 216 EMLNK-GHGADSLVYNNLISGFLELGNLDKANELFDE-LKERCLVYDGVVNATYMEWFFN 273
+ ++ G + V ++LI +LE G +D ++LFD L++ C++++ ++N +
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNG-----YAK 216
Query: 274 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEV-----LLKHGKKTQAWALFDQMLDNHTP 328
G + + + Q VT + +L V L+ G + + +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVV-------SG 269
Query: 329 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 388
+F+ ++ M ++C G+F +A FR S+A D +N +IS + ++
Sbjct: 270 VDFEGSIKNSLLSMYSKC---GRFDDASKLFRMM-----SRA---DTVTWNCMISGYVQS 318
Query: 389 GLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFC 448
GL+ E+ T F E+ S + PD T +L+ + K E ++ ++ ++ + +
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 449 NRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
+ + D K V +I S+ D + +I G GL SLE+ +++
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNS----VDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 509 YGV 511
+
Sbjct: 435 VKI 437
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
+ G+L AA +V + + + + N+IIAA + +++ LFH +S I P+
Sbjct: 589 KCGNLKAAMNVFK----TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
+++ +I++ C G VD + +R + P Y + F AGR+ EA + ++
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVK 704
Query: 216 EM 217
M
Sbjct: 705 SM 706
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 104/226 (46%), Gaps = 12/226 (5%)
Query: 194 YRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
Y L + + A A+ +M G ++ +N L++ L N DK +LFDE+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 254 ERC--LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 311
+R ++ D + ++ + ++G ++A++ + + + ++T + +L L K G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 312 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAF 371
A L+++M+ + A N IM + + + E + G K
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYN---VRIMSAQKESPERVKELIEEMSSMGLKP----- 276
Query: 372 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
D YN +++ +CE G+L EA+ ++E L + +P+ T RTLI
Sbjct: 277 --DTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 107/246 (43%), Gaps = 18/246 (7%)
Query: 123 NAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHI- 181
+ +I + +A +N A+ F Q + VS+N ++N D +L+ I
Sbjct: 106 STLIRSYGQASMFNHAMRTFEQM-DQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 182 IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGN 241
P ++Y L K + +G +A++++R+M KG ++ + ++S + G
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 242 LDKANELFDEL-KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM----TP 296
L+ A+ L++E+ K+ C + + N M KE+ + K L++ M
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIM------SAQKESPERVKELIEEMSSMGLKPDT 278
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
++ N L+ + G +A +++ + N+ PN + F++ + + G
Sbjct: 279 ISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQG-----Y 333
Query: 357 ATFRKA 362
A F+K+
Sbjct: 334 AIFKKS 339
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 160/405 (39%), Gaps = 111/405 (27%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVP--NIVSYNNVINTHCDEGRVDVALE 176
+ + N +++ + +EA +F +++P N+VS+ ++ + G+VDVA
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVF-------DLMPERNVVSWTALVKGYVHNGKVDVAES 131
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L+ + P + V++ + GF+ GRI +A L + +K D++ ++I G
Sbjct: 132 LFWKM----P-EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGL 182
Query: 237 LELGNLDKANELFDELKERCL---------------------VYDGVVNATYMEW----- 270
+ G +D+A E+FDE+ ER + ++D + T + W
Sbjct: 183 CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLM 242
Query: 271 -FFNNGRDKEAMDSYKSLMDRQFKMTPV----TCNVLLEVLLKHGKKTQAWALFDQMLDN 325
+ NGR ++A + F++ PV CN ++ L + G+ +A +FD M +
Sbjct: 243 GYVQNGRIEDA--------EELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKER 294
Query: 326 -----------HTPPNFQAVNSDTFNIMVNE---------------CFNLGKFHEA---- 355
H F+ D F +M + C +L H
Sbjct: 295 NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVH 354
Query: 356 ------------------LATFRKAGTKSNSKAF-----AMDVAGYNNIISRFCENGLLS 392
+ + K G SK + D+ +N+IIS + +GL
Sbjct: 355 AQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGE 414
Query: 393 EAETLFEEL-CSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
EA +F E+ S S P+ T + A +++ LK++ M
Sbjct: 415 EALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 166/434 (38%), Gaps = 50/434 (11%)
Query: 110 STFSSTRP-TVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDE 168
S F S + V +A + + + Y+ I +F + P+ Y ++ H
Sbjct: 163 SVFRSDKSLAVSASDAAMKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKI 222
Query: 169 GRVDVALELYRHIIA---TAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGAD 225
G +EL++ + + S Y + +GR EAL++L EM +KG
Sbjct: 223 GENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPES 282
Query: 226 SLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYK 285
S +Y+ LI F E + +LF E + L+ D + + + G + ++
Sbjct: 283 SELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVA 342
Query: 286 SLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNE 345
++ + K+T ++ K +A +++ + T+ I +N
Sbjct: 343 AMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEA-----GQVTYAIAINA 397
Query: 346 CFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKS 405
L K+++A F + K F V Y+NI+ + + LS+A L ++ +
Sbjct: 398 YCRLEKYNKAEMLF----DEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRG 453
Query: 406 LSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCA 465
P++ + +LID + + + A K++ M K KV+
Sbjct: 454 CKPNIWIYNSLIDMHGRAMDLRRAEKIWKEM--------------------KRAKVL--- 490
Query: 466 HILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG-VTNSLREFVTEV 524
PD Y +I L++ +E LYQ R G + ++ + V
Sbjct: 491 ------------PDKVSYTSMISAYNRSKELERCVE-LYQEFRMNRGKIDRAMAGIMVGV 537
Query: 525 FKKAGRGDEIERLL 538
F K R DE+ RLL
Sbjct: 538 FSKTSRIDELMRLL 551
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 135/323 (41%), Gaps = 28/323 (8%)
Query: 227 LVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKS 286
++YN + F + +L+K+ +LFDE+ ER + D T + NG K A++ ++
Sbjct: 176 ILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEK 235
Query: 287 LMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMV--- 343
+ + VT +++ + G A +L+D+ +++ TF+ ++
Sbjct: 236 MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK-----WRIDAVTFSTLIRIY 290
Query: 344 ------NECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
+ C N+ + +AL G K N + YN +I +A+ +
Sbjct: 291 GVSGNYDGCLNIYEEMKAL------GVKPN-------LVIYNRLIDSMGRAKRPWQAKII 337
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIK 457
+++L + +P+ T+ L+ AY + DDAL ++ M + GL + N +
Sbjct: 338 YKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCAD 397
Query: 458 NDKVIDCAHILSKMGERDP-KPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNS 516
N V + I M + PD + +I G + ++ L Q+ G T
Sbjct: 398 NRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLF 457
Query: 517 LREFVTEVFKKAGRGDEIERLLD 539
+ V + + KA + D++ R D
Sbjct: 458 VLTSVIQCYGKAKQVDDVVRTFD 480
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 11/240 (4%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNI 155
RAG++D A S+ + R T + +I + Y+ + ++ + PN+
Sbjct: 257 RAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEM-KALGVKPNL 315
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
V YN +I++ R A +Y+ +I T F P+ TY L + + A +AL + R
Sbjct: 316 VIYNRLIDSMGRAKRPWQAKIIYKDLI-TNGFTPNWSTYAALVRAYGRARYGDDALAIYR 374
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK--ERCLVYDGVVNATYMEWFFN 273
EM KG ++YN L+S + +D+A E+F ++K E C D ++ + +
Sbjct: 375 EMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETC-DPDSWTFSSLITVYAC 433
Query: 274 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWAL---FDQMLDNHTPPN 330
+GR EA + + + F+ T VL V+ +GK Q + FDQ+L+ P+
Sbjct: 434 SGRVSEAEAALLQMREAGFEPTLF---VLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/387 (18%), Positives = 155/387 (40%), Gaps = 25/387 (6%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
V N + ++K ++ LF + I P+ ++ +I+ G A+E +
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEML-ERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 179 RHIIATAPFG--PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+ + FG P VT + + AG + AL L + D++ ++ LI +
Sbjct: 234 EKM---SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIY 290
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
GN D +++E+K + + V+ ++ R +A YK L+ F
Sbjct: 291 GVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNW 350
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
T L+ + A A++ +M + ++ +N +++ C + EA
Sbjct: 351 STYAALVRAYGRARYGDDALAIYREMKEKGL-----SLTVILYNTLLSMCADNRYVDEAF 405
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTL 416
F+ N + D ++++I+ + +G +SEAE ++ P + ++
Sbjct: 406 EIFQDM---KNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSV 462
Query: 417 IDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKN-----DKVIDCAHILSKM 471
I Y K +++DD ++ F ++++ G+ FC + + + + K+I C
Sbjct: 463 IQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVE----- 517
Query: 472 GERDPKPDPTCYEVVIRGLCAKGLLDK 498
+ PK +V C +G+ K
Sbjct: 518 -KAKPKLGQVVKMLVEEQNCEEGVFKK 543
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 150 NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 209
+I P ++YN++I+ C + RVD A + + A+ P VT+ L G+ A R+
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM-ASKGCSPDVVTFSTLINGYCKAKRVDN 63
Query: 210 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 252
+++ EM +G A+++ Y LI GF ++G+LD A +L +E+
Sbjct: 64 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 66/131 (50%)
Query: 378 YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMV 437
YN++I FC+ + +A+ + + + SK SPDV T TLI+ Y K +R+D+ +++F M
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 438 DAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLD 497
G+ T + + + +L++M PD + ++ GLC+K L
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 498 KSLELLYQVMR 508
K+ +L + +
Sbjct: 133 KAFAILEDLQK 143
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 114 STRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDV 173
S PT T N++I + R ++A + ++ P++V+++ +IN +C RVD
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-CSPDVVTFSTLINGYCKAKRVDN 63
Query: 174 ALELY-----RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLV 228
+E++ R I+A + VTY L GF G + A DLL EM++ G D +
Sbjct: 64 GMEIFCEMHRRGIVA------NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 117
Query: 229 YNNLISGFLELGNLDKANELFDELKE 254
++ +++G L KA + ++L++
Sbjct: 118 FHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 62/134 (46%)
Query: 189 PSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANEL 248
P+ +TY + GF R+ +A +L M +KG D + ++ LI+G+ + +D E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 249 FDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLK 308
F E+ R +V + V T + F G A D ++ +T + +L L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 309 HGKKTQAWALFDQM 322
+ +A+A+ + +
Sbjct: 128 KKELRKAFAILEDL 141
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 144/350 (41%), Gaps = 50/350 (14%)
Query: 161 VINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 220
+I H R+D A E++ + P P Y + G+ + R+V+AL+L EM +
Sbjct: 41 LICNHLLSRRIDEAREVFNQV----P-SPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR 95
Query: 221 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV-YDGVVNATYMEWFFNNGRDKE 279
D + +N++ISG +E G+++ A +LFDE+ ER +V + +VN F +G+ +
Sbjct: 96 ----DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGC-----FRSGKVDQ 146
Query: 280 AMDSYKSLMDRQFKMTPV----TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVN 335
A +R F PV N ++ L+ GK A LF QM P ++
Sbjct: 147 A--------ERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQM------PGKNVIS 192
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNN---IISRFCENGLLS 392
T +++ G+ + + KS S+ F + N +GL+
Sbjct: 193 WTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII 252
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
+ L+EE S S LI Y +RI D+ KVF V + V T +
Sbjct: 253 KLGFLYEEYVSAS----------LITFYANCKRIGDSRKVFDEKVHEQVAVWTA----LL 298
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
N K D I S M P+ + + + A G LD E+
Sbjct: 299 SGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 144/347 (41%), Gaps = 81/347 (23%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKG------------ 200
PN ++N+VI + + +VAL ++R ++ P P ++ + K
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREML-LGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 201 ----FISAGRIVEAL---------------DLLREMLNKGHGADSLVYNNLISGFLELGN 241
FI +G + + ++ R++L++ D++ +N+L+S +LE G
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 242 LDKANELFDELKERCLVYDGVVNATYM-EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCN 300
+D+A LFDE++ER V + +M + G KEA + + S+ R V+ N
Sbjct: 222 VDEARALFDEMEER-----NVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV----VSWN 272
Query: 301 VLLEVLLKHGKKTQAWALFDQMLDNHT--PPNFQAVNS--------------------DT 338
++ G + +F++MLD+ T P F V+ D
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 339 FNI---------MVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
I +V+ GK +AL FR + DV+ +N+IIS +G
Sbjct: 333 HGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR--------DVSTWNSIISDLSVHG 384
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
L +A +F E+ + P+ T ++ A + +D A K+F M
Sbjct: 385 LGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMM 431
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 156/386 (40%), Gaps = 36/386 (9%)
Query: 178 YRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFL 237
Y H I P+ T+ + + + ++ AL + REML D + ++
Sbjct: 92 YAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACA 151
Query: 238 ELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 297
++ ++ + LV D V T + + +G + A + ++DR V
Sbjct: 152 AFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIA----RKVLDRMPVRDAV 207
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP-NFQ---------------------AVN 335
+ N LL L+ G +A ALFD+M + + NF +
Sbjct: 208 SWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRD 267
Query: 336 SDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
++N MV ++G ++E L F K S K + +++S G LS+ E
Sbjct: 268 VVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLV---SVLSACASLGSLSQGE 324
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDEL 455
+ + + + L+D Y K +ID AL+VF R V+ + N + +L
Sbjct: 325 WVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRA---TSKRDVSTW-NSIISDL 380
Query: 456 IKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTN 515
+ D I S+M KP+ + V+ G+LD++ + L+++M V
Sbjct: 381 SVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARK-LFEMMSSVYRVEP 439
Query: 516 SLREF--VTEVFKKAGRGDEIERLLD 539
++ + + ++ + G+ +E E L++
Sbjct: 440 TIEHYGCMVDLLGRMGKIEEAEELVN 465
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 133/326 (40%), Gaps = 31/326 (9%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P +T ++ A + + + A FH + V N N +I H + G + +A E
Sbjct: 110 PDRYTFTFVLKACSKLEWRSNGFA-FHGKVVRHGFVLNEYVKNALILFHANCGDLGIASE 168
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L+ V + +T G+ G+I EA+ L EM K D + +N +I+G
Sbjct: 169 LF-----DDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGC 219
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
L+ +D A ELFD E+ D V + + N G KEA+ +K + D
Sbjct: 220 LKCKEMDSARELFDRFTEK----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDV 275
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEAL 356
VT LL G L +L+ + + V + +N +++ G A+
Sbjct: 276 VTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAI 335
Query: 357 ATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL-LSEAE---TLFEELCSKSLSPDVPT 412
FR G K D++ +N +I GL L AE +FEE+ + P+ T
Sbjct: 336 EVFR--GVKDR------DLSTWNTLIV-----GLALHHAEGSIEMFEEMQRLKVWPNEVT 382
Query: 413 HRTLIDAYMKMERIDDALKVFHRMVD 438
+I A R+D+ K F M D
Sbjct: 383 FIGVILACSHSGRVDEGRKYFSLMRD 408
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 136/369 (36%), Gaps = 83/369 (22%)
Query: 130 YRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAP-FG 188
+++ ++A +LF+ S I ++ +N+V+ ++ V+ ++L++HI+ + P F
Sbjct: 60 FKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR 119
Query: 189 PSAVTYRHLTKGFISA--GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKAN 246
P T+ L A I +L M+N G D + + + E G +D
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD--- 176
Query: 247 ELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 306
EA D K L ++ T N LL+ L
Sbjct: 177 --------------------------------EAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 307 LKHGKKTQAWALFDQMLDN-HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 365
K + D+M D+ P+ + F I+++ N EA+ K G
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVS-----FTILIDNVCNSKNLREAMYLVSKLG-- 257
Query: 366 SNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMER 425
+ F D YN I+ FC SEA +++++ + + PD T+ TLI K R
Sbjct: 258 --NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 426 IDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEV 485
+++A MVDAG +PD Y
Sbjct: 316 VEEARMYLKTMVDAGY-----------------------------------EPDTATYTS 340
Query: 486 VIRGLCAKG 494
++ G+C KG
Sbjct: 341 LMNGMCRKG 349
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 83/194 (42%), Gaps = 1/194 (0%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P T + + ++ R +EA L T+ + P+ +YN ++ C + V E
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKEL-TEKHSPPDTYTYNFLLKHLCKCKDLHVVYE 215
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
+ P V++ L ++ + EA+ L+ ++ N G D +YN ++ GF
Sbjct: 216 FVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
L +A ++ ++KE + D + T + GR +EA K+++D ++
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDT 335
Query: 297 VTCNVLLEVLLKHG 310
T L+ + + G
Sbjct: 336 ATYTSLMNGMCRKG 349
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 157/393 (39%), Gaps = 34/393 (8%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
V T ++ + K++ +A+ +F Q+ P +Y ++ G+ + A +L+
Sbjct: 88 VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLF 147
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGA-DSLVYNNLISGFL 237
++ P+ Y L + + I +A +L +M + D Y+ L+ +
Sbjct: 148 DEMLEEG-LEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACV 206
Query: 238 ELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 297
+ D + L+ E+ ER + + V + + GR D + ++ T
Sbjct: 207 DASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGR----FDQMEKVLSDMLVSTAC 262
Query: 298 -----TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKF 352
T N++L V GK + +++ + P + TFNI++ + +
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPE-----TRTFNILIGS-YGKKRM 316
Query: 353 HEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPT 412
++ +++ + K F + YNNII F + G E F+++ S+ + D T
Sbjct: 317 YDKMSSVMEYMRKLE---FPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKT 373
Query: 413 HRTLIDAYMKMERIDDALKVFHRMVD-----AGLRVVTN--FCNRVFDELIKNDKVIDCA 465
LI+ Y +FH+++ A + N F N V K D +I+
Sbjct: 374 FCCLINGYANA-------GLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEME 426
Query: 466 HILSKMGERDPKPDPTCYEVVIRGLCAKGLLDK 498
+ +M ER D +E+++ +G+ DK
Sbjct: 427 RVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDK 459
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 129/315 (40%), Gaps = 27/315 (8%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
PTV A++AA R+ ++A ++ + P++ +Y+ ++ D + D+
Sbjct: 157 PTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDS 216
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML-NKGHGADSLVYNNLISG 235
LY+ + P+ VT + G+ GR + +L +ML + D N ++S
Sbjct: 217 LYKE-MDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSV 275
Query: 236 FLELGNLDKANELFDELKE-----RCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 290
F +G +D +++ + ++ ++ + + R + M S M +
Sbjct: 276 FGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS------YGKKRMYDKMSSVMEYMRK 329
Query: 291 -QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 349
+F T T N ++E G FDQM ++ TF ++N N
Sbjct: 330 LEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKA-----DTKTFCCLINGYANA 384
Query: 350 GKFHEALATFRKAGTKSNSKAFAM--DVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 407
G FH+ +++ + A F + + A YN +IS + L E E ++ + +
Sbjct: 385 GLFHKVISSVQLAA------KFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCV 438
Query: 408 PDVPTHRTLIDAYMK 422
D T +++AY K
Sbjct: 439 CDSRTFEIMVEAYEK 453
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 21/165 (12%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAII--AAMYRAKR-YNEAIALFHFFFT 147
+ L +AG D A ++ + S +P V T N +I +++ RA++ Y E I
Sbjct: 21 IHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMI-------- 72
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
+ +VP+ ++YN++I+ C + ++ A ++ + S T+ L G+ A R+
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVSK----------SCSTFNTLINGYCKATRV 122
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 252
+ ++L EM +G A+ + Y LI GF ++G+ + A ++F E+
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
+SN+ + YN +I+ C G+ D A ++ +++ + P TY + + F S GR
Sbjct: 7 ESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISG-LQPDVQTYNMMIR-FSSLGR- 63
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
A L EM+ +G D++ YN++I G + L +A ++ + C ++ ++N
Sbjct: 64 --AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQAR----KVSKSCSTFNTLING-- 115
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
+ R K+ M+ + + R +T L+ + G A +F +M+ N
Sbjct: 116 ---YCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 22/170 (12%)
Query: 373 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKV 432
MD AGYN II C+ G EA +F L L PDV T+ +I + + A K+
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKL 67
Query: 433 FHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCA 492
+ M+ GL T N + L K +K+ R + + +I G C
Sbjct: 68 YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCK 118
Query: 493 KGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNT 542
+ + L ++ R G+ + F++ G DFNT
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVG---------DFNT 159
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 120/283 (42%), Gaps = 28/283 (9%)
Query: 142 FHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGF 201
H ++NI + N +I + G +D +++ + VT+ + G+
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAER----RDNVTWNSMISGY 594
Query: 202 ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG 261
I + +ALDL+ ML G DS +Y ++S F + L++ E+ CL D
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 262 VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV----TCNVLLEVLLKHGKKTQAWA 317
VV + ++ + GR A+ R F PV + N ++ +HG+ +A
Sbjct: 655 VVGSALVDMYSKCGRLDYAL--------RFFNTMPVRNSYSWNSMISGYARHGQGEEALK 706
Query: 318 LFDQM-LDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 376
LF+ M LD TPP+ TF +++ C + G E F + S+S A +
Sbjct: 707 LFETMKLDGQTPPDHV-----TFVGVLSACSHAGLLEEGFKHFE---SMSDSYGLAPRIE 758
Query: 377 GYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDA 419
++ + G L + E E++ + P+V RT++ A
Sbjct: 759 HFSCMADVLGRAGELDKLEDFIEKM---PMKPNVLIWRTVLGA 798
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 147/355 (41%), Gaps = 47/355 (13%)
Query: 96 RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALF----HFFFTQSNI 151
R G L+ + S + + N I++ R+ + EA+ +F H F
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC---- 249
Query: 152 VPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEAL 211
P+ V+ ++V+ + D +++ ++ ++I V + + +G + +
Sbjct: 250 -PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGII 307
Query: 212 DLLR--EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 269
L EM+ G V N I+G G +DKA E+F+ KE+ + + V + +
Sbjct: 308 SLFNQFEMMEAG------VCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFK--------MTPVTCNVLLEVLLKHGKKTQAWALFDQ 321
NG+D EA++ ++ + K M P N+ L HG+ T +A+
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNI---AALGHGRSTHGFAVRVH 418
Query: 322 MLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNI 381
+LDN V S + M +C G+ + + F TK ++ +N++
Sbjct: 419 LLDN------VHVGSALID-MYAKC---GRINLSQIVFNMMPTK--------NLVCWNSL 460
Query: 382 ISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
++ F +G E ++FE L L PD + +L+ A ++ D+ K F M
Sbjct: 461 MNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 24/242 (9%)
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
CNA I + R ++A+ +F F Q+ + N+VS+ ++I G+ ALEL+R
Sbjct: 320 VCNAYITGLSRNGLVDKALEMFELFKEQT-MELNVVSWTSIIAGCAQNGKDIEALELFRE 378
Query: 181 IIATAPFGPSAVTYRHL--TKGFISA---GRIVEALDLLREMLNKGHGADSLVYNNLISG 235
+ A P+ VT + G I+A GR + +L+ H V + LI
Sbjct: 379 M-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH-----VGSALIDM 432
Query: 236 FLELGNLDKANELFDELKERCLV-YDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 294
+ + G ++ + +F+ + + LV ++ ++N M +G+ KE M ++SLM + K
Sbjct: 433 YAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSM-----HGKAKEVMSIFESLMRTRLKP 487
Query: 295 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNH-TPPNFQAVNSDTFNIMVNECFNLGKFH 353
++ LL + G + W F M + + P + ++ MVN GK
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLE-----HYSCMVNLLGRAGKLQ 542
Query: 354 EA 355
EA
Sbjct: 543 EA 544
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 151/343 (44%), Gaps = 32/343 (9%)
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYM 268
EAL +LR+ AD++ YN +I F + G+L+ A+ L E+ L D + + +
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 269 EWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTP 328
+ N G+ +A K + + VT + +LE + K G +A L +M +
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEM-EKEDG 266
Query: 329 PNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK----SNSKAFAM---------DV 375
+ N+ T+ +++ + EAL + G + + A + DV
Sbjct: 267 GGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDV 326
Query: 376 AGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHR 435
+ +I + + G +S +E C S + + ++M+R ++A K+F
Sbjct: 327 KALSKLIDKLVKLGGVSLSE------CFSSATV----------SLIRMKRWEEAEKIFRL 370
Query: 436 MVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKP--DPTCYEVVIRGLCAK 493
M+ G+R C+ VF EL ++ +DC + ++ ++D K D + V++ GLC +
Sbjct: 371 MLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQ 430
Query: 494 GLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIER 536
G ++ +L ++ + + S E + E KK G D + R
Sbjct: 431 GNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDLMSR 473
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 144/323 (44%), Gaps = 25/323 (7%)
Query: 146 FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAG 205
F + N+ + V+YN VI D+G +++A L + + + P +TY + G+ +AG
Sbjct: 156 FPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLY-PDVITYTSMINGYCNAG 214
Query: 206 RIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDG---- 261
+I +A L +EM +S+ Y+ ++ G + G++++A EL E+++ DG
Sbjct: 215 KIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKE----DGGGLI 270
Query: 262 ----VVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA 317
V ++ F R +EA+ + +R VT VL++ +L++ + +A +
Sbjct: 271 SPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALS 330
Query: 318 -LFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVA 376
L D+++ + +S T +++ + ++ EA FR + D
Sbjct: 331 KLIDKLVKLGGVSLSECFSSATVSLI-----RMKRWEEAEKIFRLMLV----RGVRPDGL 381
Query: 377 GYNNIISRFCENGLLSEAETLFEELCSKSL--SPDVPTHRTLIDAYMKMERIDDALKVFH 434
+++ C + L++E+ K + + D H L+ + +A K+
Sbjct: 382 ACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAK 441
Query: 435 RMVDAGLRVVTNFCNRVFDELIK 457
M+D +R+ + ++ + L K
Sbjct: 442 SMLDKKMRLKVSHVEKIIEALKK 464
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 334 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 393
VN T I++ C EAL RK + D YN +I F + G L+
Sbjct: 128 VNVKTMRIVLTLCNQANLADEALWVLRKFPEFN----VCADTVAYNLVIRLFADKGDLNI 183
Query: 394 AETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMV--DAGLRVVTNFCNRV 451
A+ L +E+ L PDV T+ ++I+ Y +IDDA ++ M D L VT +R+
Sbjct: 184 ADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTY--SRI 241
Query: 452 FDELIKNDKVIDCAHILSKMGERD----PKPDPTCYEVVIRGLCAKGLLDKSLELL 503
+ + K+ + +L++M + D P+ Y +VI+ C K ++++L +L
Sbjct: 242 LEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVL 297
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 121/286 (42%), Gaps = 47/286 (16%)
Query: 222 HGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAM 281
H + S++YN ++ ++ ++ +++FDE+ +R DG VN E N +
Sbjct: 139 HLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKR----DGFVNEKTYEVLLNRYAAAHKV 194
Query: 282 DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNI 341
D + +R+ + + + D ++ H +
Sbjct: 195 DEAVGVFERR----------------------KEFGIDDDLVAFH-------------GL 219
Query: 342 MVNEC-FNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEE 400
++ C + +F E L R+ + F D+ N I++ +C G + EA+ +++
Sbjct: 220 LMWLCRYKHVEFAETLFCSRR-------REFGCDIKAMNMILNGWCVLGNVHEAKRFWKD 272
Query: 401 LCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDK 460
+ + PDV ++ T+I+A K ++ A++++ M D CN V D L +
Sbjct: 273 IIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKR 332
Query: 461 VIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
+ + + ++ E+ P P+ Y +++ LC +K EL+ ++
Sbjct: 333 IPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 378
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 151/376 (40%), Gaps = 16/376 (4%)
Query: 138 AIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHL 197
A L QS + + + YN +++ R + +++ + F + TY L
Sbjct: 126 AYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGF-VNEKTYEVL 184
Query: 198 TKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL 257
+ +A ++ EA+ + G D + ++ L+ +++ A LF +
Sbjct: 185 LNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFG 244
Query: 258 VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA 317
+N W G EA +K ++ + + V+ ++ L K GK +A
Sbjct: 245 CDIKAMNMILNGWCVL-GNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAME 303
Query: 318 LFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAG 377
L+ M D P+ + N N++ CF + EAL FR+ K +V
Sbjct: 304 LYRAMWDTRRNPDVKICN----NVIDALCFK-KRIPEALEVFREISEKGPDP----NVVT 354
Query: 378 YNNIISRFCENGLLSEAETLFEELCSK--SLSPDVPTHRTLIDAYMKMERIDDALKVFHR 435
YN+++ C+ + L EE+ K S SP+ T L+ + + +D L+ R
Sbjct: 355 YNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLE---R 411
Query: 436 MVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGL 495
M + ++ N +F ++ DK I S+M PD Y + I GL KG
Sbjct: 412 MAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGK 471
Query: 496 LDKSLELLYQVMRYGV 511
+ ++L ++M G+
Sbjct: 472 IGEALSYFQEMMSKGM 487
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 35/276 (12%)
Query: 108 RHSTFSST----RPTVFTCN-----------AIIAAMYRAKRYNEAIALFHFFFTQSNIV 152
+H F+ T R F C+ ++ ++ AKR+ + I S
Sbjct: 227 KHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDI-------IASKCR 279
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
P++VSY +IN +G++ A+ELYR + T P ++ RI EAL+
Sbjct: 280 PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRR-NPDVKICNNVIDALCFKKRIPEALE 338
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER---CLVYDGVVNATYME 269
+ RE+ KG + + YN+L+ ++ +K EL +E++ + C D V +Y+
Sbjct: 339 VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPND--VTFSYLL 396
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
+ +D + + + + + +MT N++ + ++ K+ + ++ +M + P
Sbjct: 397 KYSQRSKDVDIV--LERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGP 454
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 365
+ T+ I ++ GK EAL+ F++ +K
Sbjct: 455 -----DQRTYTIRIHGLHTKGKIGEALSYFQEMMSK 485
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 10/222 (4%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ +L + G L A + R + P V CN +I A+ KR EA+ +F ++
Sbjct: 289 INALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFR-EISEKG 347
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHI-IATAPFGPSAVTYRHLTKGFISAGRIVE 209
PN+V+YN+++ C R + EL + + P+ VT+ +L K + R +
Sbjct: 348 PDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK---YSQRSKD 404
Query: 210 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 269
+L M S +YN + +++ +K E++ E++ L D +
Sbjct: 405 VDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIH 464
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 311
G+ EA+ ++ +M + P T E+LL K
Sbjct: 465 GLHTKGKIGEALSYFQEMMSKGMVPEPRT-----EMLLNQNK 501
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 122/283 (43%), Gaps = 24/283 (8%)
Query: 154 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 213
+I + N ++N C G V A ++ IIA+ P V+Y + G++ +A++L
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKC-RPDVVSYGTMINALTKKGKLGKAMEL 304
Query: 214 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 273
R M + D + NN+I + +A E+F E+ E+ + V + ++
Sbjct: 305 YRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 364
Query: 274 NGRDKEAMDSYKSLMDRQFKMTPVTC---NVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
R ++ + + + ++ +C +V LLK+ ++++ D +L+ N
Sbjct: 365 IRRTEKVWE-----LVEEMELKGGSCSPNDVTFSYLLKYSQRSKD---VDIVLE-RMAKN 415
Query: 331 FQAVNSDTFNIMVNECFNLG---KFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
+ SD +N+M K E + ++G + + + + + G +
Sbjct: 416 KCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHT------- 468
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
G + EA + F+E+ SK + P+ P L++ R++D +
Sbjct: 469 KGKIGEALSYFQEMMSKGMVPE-PRTEMLLNQNKTKPRVEDKM 510
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 29/233 (12%)
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQM--------------LDNHTPPNFQAVNSDTFNIMV 343
+C++++ VL H K AW L M +D + N + TF+IM
Sbjct: 157 SCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIM- 215
Query: 344 NECFNLGKFHEALATFRKAGTK------------SNSKAFAMDVAGYNNIISRFCENGL- 390
+ F + EA A + ++ K F +DV G+N I++ +C
Sbjct: 216 -DKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTD 274
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
++EA+ ++ E+ + ++P+ ++ +I + K+ + D+L+++ M GL N
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 451 VFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
+ L + D + ++ K+ E KPD Y +IR LC G LD + +L
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVL 387
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 318 LFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAG 377
L+D+M P + NS + + +CF+ EA+ +K N + D
Sbjct: 316 LYDEMKKRGLAPGIEVYNSLVYVLTREDCFD-----EAMKLMKKL----NEEGLKPDSVT 366
Query: 378 YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMV 437
YN++I CE G L A + + S++LSP V T ++A + L+V +M
Sbjct: 367 YNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMK 422
Query: 438 DAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLD 497
+ L + +L K + + I ++M + +P Y I+GL + G L+
Sbjct: 423 ISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLE 482
Query: 498 KSLELLYQVMRYGVGVTNSLREFVTEVFKKAG 529
K+ E +Y M+ V N + + + E K G
Sbjct: 483 KARE-IYSEMKSKGFVGNPMLQKLLEEQKVKG 513
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 158/393 (40%), Gaps = 26/393 (6%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKR---YNEAIALFHFFFT 147
V SL +A + + A S+ S + + + I + R R +AI F F +
Sbjct: 142 VNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARS 201
Query: 148 QSNIVPNIVSY---NNVINTHCDEGRVDVALELYRHIIAT--APFGPSAVTYRHLTKGFI 202
+ + +++ C EG V A I T + + PS + L G+
Sbjct: 202 YEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWF 261
Query: 203 SAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV 262
+ ++ +A L EM + Y LI G+ + + A E+ +E+K + + +
Sbjct: 262 RSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFM 321
Query: 263 VNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM----TPVTCNVLLEVLLKHGKKTQAWAL 318
V ++ GR EA+ +M+R F T VT N L++ K G A +
Sbjct: 322 VFNPIIDGLGEAGRLSEAL----GMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKI 377
Query: 319 FDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGY 378
M+ P + T+N K E + + K +S D Y
Sbjct: 378 LKMMMTRGVDPT-----TTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP----DRLTY 428
Query: 379 NNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD 438
+ I+ CE+G LS A + +E+ ++ + PD+ T LI ++E +++A + F V
Sbjct: 429 HLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVR 488
Query: 439 AGLRVVTNFCNRVFDELIKNDKVIDCAHILSKM 471
G+ + ++ D +++ + D A LS +
Sbjct: 489 RGI-IPQYITFKMIDNGLRSKGMSDMAKRLSSL 520
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/424 (18%), Positives = 170/424 (40%), Gaps = 44/424 (10%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNN---VINTHCDEGRVDV 173
P++F ++++ ++ +A+ + A +L F +S+ N+VS + +I + G V
Sbjct: 135 PSLF--DSVVNSLCKAREFEIAWSLV-FDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQ 191
Query: 174 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI 233
A+ + + P SA R L LL + +GH ++ +Y I
Sbjct: 192 AIRAFEFARSYEPVCKSATELRLLEV-------------LLDALCKEGHVREASMYLERI 238
Query: 234 SGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK 293
G ++ N + +F+ L + +F + + K+A ++ + K
Sbjct: 239 GGTMD-SNWVPSVRIFNIL---------------LNGWFRSRKLKQAEKLWEEMKAMNVK 282
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 353
T VT L+E + + A + ++M NF FN +++ G+
Sbjct: 283 PTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMV-----FNPIIDGLGEAGRLS 337
Query: 354 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
EAL + + + YN+++ FC+ G L A + + + ++ + P T+
Sbjct: 338 EALGMMERFFVCESGPT----IVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTY 393
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGE 473
+ K + ++ + ++ ++++AG + + L ++ K+ + +M
Sbjct: 394 NHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKN 453
Query: 474 RDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDE 533
R PD ++I LC +L+++ E +R G+ + + + G D
Sbjct: 454 RGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDM 513
Query: 534 IERL 537
+RL
Sbjct: 514 AKRL 517
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 120/259 (46%), Gaps = 13/259 (5%)
Query: 171 VDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYN 230
+D+ + R +T AV Y + + S GR EA ++ + M N G+ D++ Y+
Sbjct: 351 LDLVFRVSRKYESTGKSLSKAV-YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYS 409
Query: 231 NLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 290
L+ G + L++A + D+++ + D ++ N +A+ + +++++
Sbjct: 410 QLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEK 469
Query: 291 QFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLG 350
F + +VL++ + H K A +M+ N +Q+ T+ +++++ +
Sbjct: 470 GFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQS----TYKLLIDKLLKIK 525
Query: 351 KFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDV 410
K EAL + K N A+A GY +++F G L +A+ + L SK SP
Sbjct: 526 KSEEALDLLQMM-KKQNYPAYAEAFDGY---LAKF---GTLEDAKKFLDVLSSKD-SPSF 577
Query: 411 PTHRTLIDAYMKMERIDDA 429
+ +I+A+ + R+ DA
Sbjct: 578 AAYFHVIEAFYREGRLTDA 596
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 108/234 (46%), Gaps = 15/234 (6%)
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 338
E + Y+ +MD FK + C++LL L G L ++ + ++++
Sbjct: 316 ETVKLYEYMMDGPFKPSIQDCSLLLRYL--SGSPNPDLDLVFRVSRKYESTG-KSLSKAV 372
Query: 339 FNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAE 395
++ + ++G+F EA R AG + D Y+ ++ C+ L EA
Sbjct: 373 YDGIHRSLTSVGRFDEAEEITKAMRNAG-------YEPDNITYSQLVFGLCKAKRLEEAR 425
Query: 396 TLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDEL 455
+ +++ ++ PD+ T LI + K +D AL F M++ G + +N + + D
Sbjct: 426 GVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGF 485
Query: 456 IKNDKVIDCAHILSKMGER-DPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
+ ++K + L +M + + KP + Y+++I L +++L+LL Q+M+
Sbjct: 486 VIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLL-QMMK 538
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/419 (18%), Positives = 172/419 (41%), Gaps = 25/419 (5%)
Query: 138 AIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHL 197
A+++F + Q +YN +I + + + L + A S T+ +
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLL--SKETFALI 168
Query: 198 TKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL 257
++ + A ++ EA+ +M G +S +N ++ + N+ A ++FD++K++
Sbjct: 169 SRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRF 228
Query: 258 VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWA 317
D +E + + + + D F+ V +++ K K +A
Sbjct: 229 EPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIR 288
Query: 318 LFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAG 377
F++M + P + F ++N + K ++AL F +S S F ++
Sbjct: 289 FFNEMEQRNCKP-----SPHIFCSLINGLGSEKKLNDALEFFE----RSKSSGFPLEAPT 339
Query: 378 YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM- 436
YN ++ +C + + +A +E+ K + P+ T+ ++ ++M+R +A +V+ M
Sbjct: 340 YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS 399
Query: 437 ----VDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCA 492
V +V FCN+ +++ I +M + P + +I LC
Sbjct: 400 CEPTVSTYEIMVRMFCNK--------ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCH 451
Query: 493 KGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPPQLT 551
+ LD++ E +++ G+ + + + GR D++ L+ R R QL
Sbjct: 452 ENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV-VKMDRLRKTQLV 509
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 154/353 (43%), Gaps = 36/353 (10%)
Query: 124 AIIAAMY-RAKRYNEAIALFH----FFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
A+I+ Y RA++ EAI FH F F + +N +++T V A +++
Sbjct: 166 ALISRRYARARKVKEAIGAFHKMEEFGFKMES-----SDFNRMLDTLSKSRNVGDAQKVF 220
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+ F P +Y L +G+ ++ ++ REM ++G D + Y +I+ +
Sbjct: 221 DKM-KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCK 279
Query: 239 LGNLDKANELFDELKER-CL----VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFK 293
++A F+E+++R C ++ ++N E N+ A++ ++ F
Sbjct: 280 AKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLND-----ALEFFERSKSSGFP 334
Query: 294 MTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFH 353
+ T N L+ + A+ D+M PN + T++I+++ + +
Sbjct: 335 LEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPN-----ARTYDIILHHLIRMQRSK 389
Query: 354 EALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTH 413
EA ++ + V+ Y ++ FC L A +++E+ K + P +
Sbjct: 390 EAYEVYQTMSCEPT-------VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMF 442
Query: 414 RTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELI---KNDKVID 463
+LI A ++D+A + F+ M+D G+R + +R+ L+ + DKV D
Sbjct: 443 SSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTD 495
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 138/328 (42%), Gaps = 13/328 (3%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
PT+ T N +++ ++ A + +S + + Y +I++ G+VD E
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLV-QESGMTADCKLYTTLISSCAKSGKVDAMFE 523
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
++ H ++ + + T+ L G AG++ +A + +K D +V+N LIS
Sbjct: 524 VF-HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 237 LELGNLDKANELFDELKERC--LVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 294
+ G +D+A ++ E+K + D + M+ N G+ + A + Y+ + +
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 295 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 354
TP + + K G A +++ M + P + F+ +++ + E
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTP-----DEVFFSALIDVAGHAKMLDE 697
Query: 355 ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
A + A S+ + Y++++ C +A L+E++ S L P + T
Sbjct: 698 AFGILQDA----KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMN 753
Query: 415 TLIDAYMKMERIDDALKVFHRMVDAGLR 442
LI A + ++ A++ + GL+
Sbjct: 754 ALITALCEGNQLPKAMEYLDEIKTLGLK 781
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 315 AWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMD 374
A +FD+M P + +FN ++N C N KF F++ K + + D
Sbjct: 125 AQKVFDEM-----PERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEP---D 176
Query: 375 VAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFH 434
VA YN +I C G +EA L +E+ +K L PD T L+ + ++ +++
Sbjct: 177 VASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWA 236
Query: 435 RMVDAGL-RVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAK 493
RMV+ + R + ++ R+ ++N K + + K+ + KPD + +I+G ++
Sbjct: 237 RMVEKNVKRDIRSYNARLLGLAMEN-KSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 494 GLLDKSLELLYQVMRYG 510
G LD+++ ++ + G
Sbjct: 296 GKLDEAITWYKEIEKNG 312
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 116/285 (40%), Gaps = 44/285 (15%)
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
+ N +S+N ++N + + D+ +++ + P +Y L KG G
Sbjct: 134 ERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSF 193
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
EA+ L+ E+ NKG D + +N L+ G ++ +++ + E+
Sbjct: 194 TEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEK------------ 241
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
N RD + SY N L L K + +LFD++ N
Sbjct: 242 -----NVKRD---IRSY---------------NARLLGLAMENKSEEMVSLFDKLKGNEL 278
Query: 328 PPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCE 387
P+ TF M+ + GK EA+ T+ K K+ + +N+++ C+
Sbjct: 279 KPDVF-----TFTAMIKGFVSEGKLDEAI-TWYKEIEKNGCRPLKF---VFNSLLPAICK 329
Query: 388 NGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKV 432
G L A L +E+ +K L D + ++DA +K + D+A ++
Sbjct: 330 AGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 98/248 (39%), Gaps = 7/248 (2%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S V +NL+ RV G + A V + + T + NA++ A +K++
Sbjct: 104 SKEGFVARIINLYGRV------GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKF 157
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
+ +F + +I P++ SYN +I C +G A+ L I P +T+
Sbjct: 158 DLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE-IENKGLKPDHITFN 216
Query: 196 HLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
L + G+ E + M+ K D YN + G ++ LFD+LK
Sbjct: 217 ILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGN 276
Query: 256 CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQA 315
L D ++ F + G+ EA+ YK + + N LL + K G A
Sbjct: 277 ELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESA 336
Query: 316 WALFDQML 323
+ L ++
Sbjct: 337 YELCKEIF 344
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/372 (18%), Positives = 144/372 (38%), Gaps = 57/372 (15%)
Query: 176 ELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISG 235
E ++ F + Y + +A + ++L E + + +I+
Sbjct: 56 EKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINL 115
Query: 236 FLELGNLDKANELFDELKER-----CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 290
+ +G + A ++FDE+ ER L ++ ++NA N + + ++ +
Sbjct: 116 YGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACV------NSKKFDLVEGIFKELPG 169
Query: 291 QFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFN 348
+ + P + N L++ L G T+A AL D++ + P+ TFNI+++E +
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPD-----HITFNILLHESYT 224
Query: 349 LGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSP 408
GKF E + + K+ + D+ YN + E +LF++L L P
Sbjct: 225 KGKFEEGEQIWARMVEKNVKR----DIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKP 280
Query: 409 DVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHIL 468
DV T +I ++ ++D+A+ + + G R
Sbjct: 281 DVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCR-------------------------- 314
Query: 469 SKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKA 528
P + ++ +C G L+ + EL ++ + V ++ + V + K
Sbjct: 315 ---------PLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKG 365
Query: 529 GRGDEIERLLDF 540
+ DE E +++
Sbjct: 366 SKQDEAEEIVEL 377
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/399 (19%), Positives = 163/399 (40%), Gaps = 29/399 (7%)
Query: 47 LRIEPPL--NAIRPPLQ--HSPSRDPNAPRLPDSTSALVGPRLNLHNRVQSLI-RAGDLD 101
R EP + N ++ + H R N + D S VG ++N + S+ A +LD
Sbjct: 151 FRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVG----IYNTMLSIAGEARNLD 206
Query: 102 AASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNV 161
+ + + T +I+ +AK+ + + +F +S + +YN +
Sbjct: 207 MVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKM-RKSGFELDATAYNIM 265
Query: 162 INTHCDEGRVDVALELYRHIIATA-PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNK 220
I + C GR D+ALE Y+ ++ FG TY+ L + ++ + +M+
Sbjct: 266 IRSLCIAGRGDLALEFYKEMMEKGITFGLR--TYKMLLDCIAKSEKVDVVQSIADDMVRI 323
Query: 221 GHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 280
++ + L+ F G + +A EL ELK + + D ++ R +A
Sbjct: 324 CEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDA 383
Query: 281 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 340
++ + R+ + V +++ L+ ++A F+ + + PP T+
Sbjct: 384 LEIVDIMKRRKLDDSNVY-GIIISGYLRQNDVSKALEQFEVIKKSGRPPRVS-----TYT 437
Query: 341 IMVNECFNLGKFHEALATFRKA---GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
++ F L +F + F + G + +S A VAG+ ++EA +
Sbjct: 438 EIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLG-------QNRVAEAWKV 490
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
F + K + P ++ + + R D+ +K+F++M
Sbjct: 491 FSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 138/353 (39%), Gaps = 35/353 (9%)
Query: 212 DLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWF 271
+L+ EM G D + LIS + + + K +F+++++ D +
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 272 FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 331
GR A++ YK +M++ T +LL+ + K K ++ D M+
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMV-----RIC 324
Query: 332 QAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS---NSKAFAMDVAG----------- 377
+ D F ++ GK EAL R+ K ++K F + V G
Sbjct: 325 EISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDAL 384
Query: 378 ----------------YNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYM 421
Y IIS + +S+A FE + P V T+ ++
Sbjct: 385 EIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLF 444
Query: 422 KMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPT 481
K+++ + +F+ M++ G+ + V + ++V + + S M E+ KP
Sbjct: 445 KLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWK 504
Query: 482 CYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEI 534
Y + ++ LC D+ +++ Q+ + + + + +V +K G ++I
Sbjct: 505 SYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKI 557
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 130/290 (44%), Gaps = 30/290 (10%)
Query: 156 VSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLR 215
VS+N +I+++ +G + A L+ + +P ++ L G+++ + L R
Sbjct: 202 VSWNLIISSYAKKGDMGNACSLFSAMPLKSP-----ASWNILIGGYVNC----REMKLAR 252
Query: 216 EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL-KERCLVYDGVVNATYMEWFFNN 274
+ + + + +ISG+ +LG++ A ELF + K+ LVYD ++ A Y + N
Sbjct: 253 TYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI-ACYTQ----N 307
Query: 275 GRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
G+ K+A+ + +++R + P +T + ++ + G + F ++++ +
Sbjct: 308 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTS-----FGTWVESYITEHGI 362
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLS 392
++ +++ G F +A F K D Y+ +I NG+ +
Sbjct: 363 KIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK--------DTVSYSAMIMGCGINGMAT 414
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR 442
EA +LF + K + P+V T L+ AY + + K F+ M D L
Sbjct: 415 EANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLE 464
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 163/390 (41%), Gaps = 30/390 (7%)
Query: 52 PLNAIRPP--LQHSPSRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASSVARH 109
P+ I P + H +P R STS ++ +R+ L R G L A+
Sbjct: 5 PVVGITSPALITHKNHANPKIQRHNQSTSE---TTVSWTSRINLLTRNGRLAEAAKEFSD 61
Query: 110 STFSSTRPTVFTCNAIIAAMYRAKRYNEAIA-LFHFFFTQSNIVPNIVSYNN-VINTHCD 167
T + P T A+++ +EA+ L H + + + N V +I +
Sbjct: 62 MTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSK 121
Query: 168 EGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSL 227
GR A ++ ++ ++VT+ + G++ +G++ A + +M + D +
Sbjct: 122 RGRFKKARLVFDYM-----EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLI 172
Query: 228 VYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSL 287
+ +I+GF++ G ++A F E++ + D V + N G + ++ +
Sbjct: 173 SWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYV 232
Query: 288 MDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECF 347
+ + FK N L+++ + G A +F M + T ++ +V +V
Sbjct: 233 LSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM-EKRTVVSWNSV-------IVGFAA 284
Query: 348 NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL-CSKSL 406
N G HE+L FRK K F D + ++ GL+ E F+ + C +
Sbjct: 285 N-GNAHESLVYFRKM----QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRI 339
Query: 407 SPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
SP + + L+D Y + R++DALK+ M
Sbjct: 340 SPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/471 (19%), Positives = 175/471 (37%), Gaps = 106/471 (22%)
Query: 110 STFSSTRPTVFT---CNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHC 166
+T ++T+P++ C + + + + + +FH T+ + ++ + ++ C
Sbjct: 16 ATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSC 75
Query: 167 DEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG----- 221
+ G + +L + + + + Y L +G+ S+G EA+ L M+N G
Sbjct: 76 ELGTRE-SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDK 134
Query: 222 ----------------------HG--------ADSLVYNNLISGFLELGNLDKANELFDE 251
HG D V N+L+ + E G LD A ++FDE
Sbjct: 135 YTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE 194
Query: 252 LKERCLVYDGVVNATY---------MEWFFNNGRDKEAM--------------------- 281
+ ER +V + Y ++ FF RD+E
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 282 --DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
Y + + ++ + + L+++ +K A LFD+ + A N D
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE---------YGASNLDLC 305
Query: 340 NIMVNECFNLGKFHEALATFR---KAGTKSNSKAFAMDVAGY----NNIISRFCENGLLS 392
N M + G EAL F +G + + + ++ N + + C +L
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
++ +C+ LID YMK R D A ++F RM + VVT N +
Sbjct: 366 NGFESWDNICN-----------ALIDMYMKCHRQDTAFRIFDRMSNK--TVVT--WNSIV 410
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
++N +V M P+ + + +I GL L ++++E+
Sbjct: 411 AGYVENGEVDAAWETFETM----PEKNIVSWNTIISGLVQGSLFEEAIEVF 457
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 162/421 (38%), Gaps = 63/421 (14%)
Query: 114 STRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDV 173
S + +F N IIA R+ + A+ +FH ++ I N + +I D R+
Sbjct: 56 SDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSL----LIGISKDPSRMME 111
Query: 174 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI 233
A +L+ I P P +Y + ++ +A M K D+ +N +I
Sbjct: 112 AHQLFDEI----P-EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMI 162
Query: 234 SGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW--------FFNNG---------- 275
+G+ G ++KA ELF + E+ V + + Y+E FF
Sbjct: 163 TGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTA 222
Query: 276 ------RDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
+ K+ + D VT N ++ +++ + LF ML+ P
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENG 389
N ++S C L AL R+ + DV ++IS +C+ G
Sbjct: 283 NSSGLSSALLG-----CSELS----ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 390 LLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR------- 442
L +A LFE + K DV +I Y + D AL +F M+D +R
Sbjct: 334 ELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389
Query: 443 VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
V CN L+ I A+ S + + +P P Y ++ L G L+++L+L
Sbjct: 390 AVLLACNHA--GLVN----IGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKL 443
Query: 503 L 503
+
Sbjct: 444 I 444
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/471 (19%), Positives = 175/471 (37%), Gaps = 106/471 (22%)
Query: 110 STFSSTRPTVFT---CNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHC 166
+T ++T+P++ C + + + + + +FH T+ + ++ + ++ C
Sbjct: 16 ATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSC 75
Query: 167 DEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG----- 221
+ G + +L + + + + Y L +G+ S+G EA+ L M+N G
Sbjct: 76 ELGTRE-SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDK 134
Query: 222 ----------------------HG--------ADSLVYNNLISGFLELGNLDKANELFDE 251
HG D V N+L+ + E G LD A ++FDE
Sbjct: 135 YTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE 194
Query: 252 LKERCLVYDGVVNATY---------MEWFFNNGRDKEAM--------------------- 281
+ ER +V + Y ++ FF RD+E
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 282 --DSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
Y + + ++ + + L+++ +K A LFD+ + A N D
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE---------YGASNLDLC 305
Query: 340 NIMVNECFNLGKFHEALATFR---KAGTKSNSKAFAMDVAG----YNNIISRFCENGLLS 392
N M + G EAL F +G + + + ++ N + + C +L
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 393 EAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVF 452
++ +C+ LID YMK R D A ++F RM + VVT N +
Sbjct: 366 NGFESWDNICN-----------ALIDMYMKCHRQDTAFRIFDRMSNK--TVVT--WNSIV 410
Query: 453 DELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
++N +V M P+ + + +I GL L ++++E+
Sbjct: 411 AGYVENGEVDAAWETFETM----PEKNIVSWNTIISGLVQGSLFEEAIEVF 457
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 127/304 (41%), Gaps = 32/304 (10%)
Query: 134 RYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVT 193
+ ++ALFH I P++ + INT G D A LY ++++ P+ T
Sbjct: 79 KIRHSLALFH-----QTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS-EINPNEFT 132
Query: 194 YRHLTKGF-ISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 252
+ L K +G+++ +L G G D V L+ + + G++ A ++FD +
Sbjct: 133 FSSLLKSCSTKSGKLIHT-----HVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 253 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 312
ER LV + Y + + +++ ++L D + V+ NV+++ +HG
Sbjct: 188 PERSLVSSTAMITCYAK--------QGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFP 239
Query: 313 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 372
A LF ++L P + T ++ C +G AL T R S
Sbjct: 240 NDALMLFQKLLAEGKPKP----DEITVVAALSACSQIG----ALETGRWIHVFVKSSRIR 291
Query: 373 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKV 432
++V +I + + G L EA +F + K D+ +I Y DAL++
Sbjct: 292 LNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK----DIVAWNAMIAGYAMHGYSQDALRL 347
Query: 433 FHRM 436
F+ M
Sbjct: 348 FNEM 351
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 139/369 (37%), Gaps = 86/369 (23%)
Query: 150 NIVPNIVSYNNVINTHCDEGRVDVALELYRH----------------------IIATAPF 187
++ ++ SYN ++ T C GRVD+A ++Y+ + A A
Sbjct: 330 DVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKM 389
Query: 188 ----------------GPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNN 231
P+ T+ L +AG + +A L EML G +S +N
Sbjct: 390 WKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNI 449
Query: 232 LISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE----AMDSYKSL 287
L+ +E D+A LF K V + Y + + GR + SL
Sbjct: 450 LLHACVEACQYDRAFRLFQSWKG-----SSVNESLYADDIVSKGRTSSPNILKNNGPGSL 504
Query: 288 MDRQ-------------FKMTPVTCNVLLEVL---LKHGKKTQAWALFDQMLDNHTPPNF 331
++R FK T T N+LL+ GK+ L D+M P
Sbjct: 505 VNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKE-----LMDEMKSLGLSP-- 557
Query: 332 QAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNSKAFAMDVAGYNNIISRFCEN 388
N T++ +++ C G A L T AGT+ DV Y I EN
Sbjct: 558 ---NQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRP-------DVVAYTTAIKICAEN 607
Query: 389 GLLSEAETLFEELCSKSLSPDVPTHRTLIDA---YMKMERIDDALKVFHRMVDAGLRVVT 445
L A +LFEE+ + P+ T+ TL+ A Y + + L ++ M +AG +
Sbjct: 608 KCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPND 667
Query: 446 NFCNRVFDE 454
+F + +E
Sbjct: 668 HFLKELIEE 676
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 36/246 (14%)
Query: 292 FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 351
F+ T + ++L+++ + G+ W L D+M+ + P + TFN+++ C G
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPT-----TARTFNLLICSCGEAGL 199
Query: 352 FHEALATFRKAGT-------------------------------KSNSKAFAMDVAGYNN 380
+A+ F K+ T + F+ DV YN
Sbjct: 200 AKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNI 259
Query: 381 IISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
++ G + + LF+E+ SPD T+ L+ K + AL + M + G
Sbjct: 260 LLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVG 319
Query: 441 LRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSL 500
+ + D L + + C + L +M + +PD CY V+I G G LDK+
Sbjct: 320 IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAK 379
Query: 501 ELLYQV 506
E+ ++
Sbjct: 380 EMFREM 385
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 9/226 (3%)
Query: 215 REMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNN 274
++ML G D L YN L+ LG +D+ + LFDE+ D +
Sbjct: 243 KQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKG 302
Query: 275 GRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAV 334
+ A+ + + + + + L++ L + G D+M+ P+
Sbjct: 303 NKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC- 361
Query: 335 NSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEA 394
+ +M+ G+ +A FR+ K +V YN++I C G EA
Sbjct: 362 ----YTVMITGYVVSGELDKAKEMFREMTVKGQLP----NVFTYNSMIRGLCMAGEFREA 413
Query: 395 ETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
L +E+ S+ +P+ + TL+ K ++ +A KV MV G
Sbjct: 414 CWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 123/282 (43%), Gaps = 22/282 (7%)
Query: 192 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 251
V + + G+I G ++EA L +M + D + +N ++ G+ +G+++ +FD+
Sbjct: 91 VLWNTMISGYIEMGNMLEARSLFDQMPCR----DVMSWNTVLEGYANIGDMEACERVFDD 146
Query: 252 LKER-CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHG 310
+ ER ++G++ + NGR E + S+K ++D + V + + ++L
Sbjct: 147 MPERNVFSWNGLIKG-----YAQNGRVSEVLGSFKRMVDEG---SVVPNDATMTLVLSAC 198
Query: 311 KKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKA 370
K A+ + + V+ + N +++ G A+ F+ G K
Sbjct: 199 AKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK--GIKRR--- 253
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
D+ +N +I+ +G +EA LF E+ + +SPD T ++ A M ++D L
Sbjct: 254 ---DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGL 310
Query: 431 KVFHRM-VDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKM 471
F+ M D + C V D L + + ++KM
Sbjct: 311 AYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKM 352
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 140/318 (44%), Gaps = 43/318 (13%)
Query: 125 IIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT 184
+I + R R +EA +F + N+V++ +I + RVDVA R +
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRER-----NVVTWTTMITGYRQNNRVDVA----RKLFEV 228
Query: 185 APFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDK 244
P + V++ + G+ +GRI +A + M K + N +I GF E+G + K
Sbjct: 229 MP-EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISK 283
Query: 245 ANELFDELKER-CLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLL 303
A +FD +++R + G++ A + G + EA+D + + + + + + +L
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKA-----YERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 304 EVL-----LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALAT 358
V L++G++ A + Q D+ + M +C G+ +A
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDDD-------VYVASVLMTMYVKC---GELVKAKLV 388
Query: 359 FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLID 418
F + +K D+ +N+IIS + +GL EA +F E+ S P+ T ++
Sbjct: 389 FDRFSSK--------DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 419 AYMKMERIDDALKVFHRM 436
A ++++ L++F M
Sbjct: 441 ACSYAGKLEEGLEIFESM 458
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 35/233 (15%)
Query: 205 GRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV-YDGVV 263
G+I EA + K G+ +N+++SG+ G +A +LFDE+ ER +V ++G+V
Sbjct: 31 GKINEARKFFDSLQFKAIGS----WNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLV 86
Query: 264 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 323
+ + N EA + ++ + +R V+ +++ ++ G +A +LF +M
Sbjct: 87 SG-----YIKNRMIVEARNVFELMPERNV----VSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 324 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 383
+ N ++ +M + G+ +A + K DV N+I
Sbjct: 138 ER---------NEVSWTVMFGGLIDDGRIDKARKLYDMMPVK--------DVVASTNMIG 180
Query: 384 RFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
C G + EA +F+E+ + +V T T+I Y + R+D A K+F M
Sbjct: 181 GLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVARKLFEVM 229
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 157/402 (39%), Gaps = 47/402 (11%)
Query: 107 ARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHC 166
AR + V + N +++ + + EA +F + N+VS+ ++ +
Sbjct: 67 ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPER-----NVVSWTAMVKGYM 121
Query: 167 DEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADS 226
EG V A L+ + P + V++ + G I GRI +A L M K D
Sbjct: 122 QEGMVGEAESLFWRM----P-ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DV 172
Query: 227 LVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKS 286
+ N+I G G +D+A +FDE++ER VV T M R +D +
Sbjct: 173 VASTNMIGGLCREGRVDEARLIFDEMRER-----NVVTWTTM---ITGYRQNNRVDVARK 224
Query: 287 LMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNEC 346
L + + T V+ +L G+ A F+ M P N M+
Sbjct: 225 LFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMKPVIAC------NAMIVGF 275
Query: 347 FNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSL 406
+G+ +A F + N A + +I + G EA LF ++ + +
Sbjct: 276 GEVGEISKARRVFDLMEDRDN--------ATWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Query: 407 SPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAH 466
P P+ +++ + + + R V A L V F + V+ + + C
Sbjct: 328 RPSFPSLISILSVCATLASLQ-----YGRQVHAHL-VRCQFDDDVYVASVLMTMYVKCGE 381
Query: 467 ILSK--MGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQV 506
++ + +R D + +I G + GL +++L++ +++
Sbjct: 382 LVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEM 423
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 10/178 (5%)
Query: 76 STSALVGPRLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRY 135
S LVG + +Q L +AGD D A + + P + T N ++ + + +
Sbjct: 8 SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKL 67
Query: 136 NEAIAL------FHFFFTQS--NIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPF 187
+A+ + F + S + PN+V+Y +I+ C +G + A L+R + P
Sbjct: 68 EKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPL 127
Query: 188 GPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKA 245
P + TY L + + G + +L++EM + D+ Y L++ L G LDK
Sbjct: 128 -PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 183
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 281 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 340
M+ ++ + R VT L++ L + G A +F +M+ + PP+ T+N
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIM-----TYN 55
Query: 341 IMVNECFNLGKFHEALATFRKAGTKSNS---------KAFAMDVAGYNNIISRFCENGLL 391
I+++ GK +AL AG + K +V Y +IS FC+ G
Sbjct: 56 ILLDGLCKNGKLEKALV----AGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFK 111
Query: 392 SEAETLFEELCSKSLSPDVPTHRTLIDAYMK 422
EA TLF ++ PD T+ TLI A+++
Sbjct: 112 EEAYTLFRKMKEDGPLPDSGTYNTLIRAHLR 142
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 32/169 (18%)
Query: 175 LELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLIS 234
+EL+R + G + VTY L +G AG A ++ +EM++ G D + YN L+
Sbjct: 1 MELFREMSQRGLVG-NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLD 59
Query: 235 GFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 294
G + G L+KA G+ ++ D + SL + K
Sbjct: 60 GLCKNGKLEKA--------------------------LVAGKVEDGWDLFCSLSLKGVKP 93
Query: 295 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMV 343
VT ++ K G K +A+ LF +M ++ P +S T+N ++
Sbjct: 94 NVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLP-----DSGTYNTLI 137
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 206
+Q +V N V+Y +I G D+A E+++ +++ P +TY L G G+
Sbjct: 8 SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG-VPPDIMTYNILLDGLCKNGK 66
Query: 207 IVEAL---------DLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCL 257
+ +AL DL + KG + + Y +ISGF + G ++A LF ++KE
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 258 VYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 306
+ D T + +G + + K + +F T ++ ++L
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 165/389 (42%), Gaps = 29/389 (7%)
Query: 135 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAV-T 193
+N+A F + +Q+ V + +YN +++ D+ EL + + T
Sbjct: 146 WNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDT 205
Query: 194 YRHLTKGFISAGRIVEALDLLREMLNKGHGA--DSLVYNNLISGFLELGNLDKANE---- 247
+ + +G+ +A+D EM K +G D++ N+L+ ++ +++ A+E
Sbjct: 206 MSKVMRRLAKSGKYNKAVDAFLEM-EKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 248 LFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLL 307
LFD +K ++ +++ F++ R MD K +F VT +E
Sbjct: 265 LFDTIKPDARTFNILIHGFCKARKFDDAR--AMMDLMKV---TEFTPDVVTYTSFVEAYC 319
Query: 308 KHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSN 367
K G + + ++M +N PN T+ I+++ + EAL + K
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVV-----TYTIVMHSLGKSKQVAEALGVYEKM----K 370
Query: 368 SKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERID 427
D Y+++I + G +A +FE++ ++ + DV + T+I A + R +
Sbjct: 371 EDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDE 430
Query: 428 DALKVFHRMVD-AGLRVVTNFCNRVFDELIKNDKVIDCAHILS----KMGERDPKPDPTC 482
AL++ RM D G N + L+K +L M + D D +
Sbjct: 431 MALRLLKRMEDEEGESCSPNV--ETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVST 488
Query: 483 YEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
Y ++IRGLC G ++++ + +R G+
Sbjct: 489 YILLIRGLCMSGKVEEACLFFEEAVRKGM 517
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 129/310 (41%), Gaps = 9/310 (2%)
Query: 123 NAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHII 182
N+++ A+ + A +F F I P+ ++N +I+ C + D A + ++
Sbjct: 243 NSLMDALVKENSIEHAHEVFLKLF--DTIKPDARTFNILIHGFCKARKFDDARAMM-DLM 299
Query: 183 ATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNL 242
F P VTY + + G ++L EM G + + Y ++ + +
Sbjct: 300 KVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQV 359
Query: 243 DKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVL 302
+A +++++KE V D ++ + GR K+A + ++ + ++ + + N +
Sbjct: 360 AEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTM 419
Query: 303 LEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKA 362
+ L H + A L +M D + N +T+ ++ K + L
Sbjct: 420 ISAALHHSRDEMALRLLKRMEDEEGESC--SPNVETYAPLLKM-CCHKKKMKLLGILLHH 476
Query: 363 GTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMK 422
K++ ++DV+ Y +I C +G + EA FEE K + P T + L+D K
Sbjct: 477 MVKND---VSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEK 533
Query: 423 MERIDDALKV 432
+ LK+
Sbjct: 534 KNMAEAKLKI 543
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 149/351 (42%), Gaps = 22/351 (6%)
Query: 154 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 213
++VS+N++I+ + G + ++Y+ ++A + F P+ VT + + + ++ L++
Sbjct: 197 DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEV 256
Query: 214 LREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFN 273
++M+ D + N +I + + G+LD A LFDE+ E+ V G + + YM
Sbjct: 257 HKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMA---- 312
Query: 274 NGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQA 333
+G KEAM +L + T N ++ L+++ + F +M+ + PN
Sbjct: 313 HGLVKEAM----ALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVT 368
Query: 334 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 393
++S ++ + GK A A + G +N + +II + + G L
Sbjct: 369 LSSLLPSLTYSSNLKGGKEIHAFAI--RNGADNN-------IYVTTSIIDNYAKLGFLLG 419
Query: 394 AETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFD 453
A+ +F+ +SL +I AY D A +F +M G + V
Sbjct: 420 AQRVFDNCKDRSL----IAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLS 475
Query: 454 ELIKNDKVIDCAHILSKMGER-DPKPDPTCYEVVIRGLCAKGLLDKSLELL 503
+ HI M + D +P Y ++ L G L ++E +
Sbjct: 476 AFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFI 526
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 163/403 (40%), Gaps = 49/403 (12%)
Query: 124 AIIAAMYRAKRYNEAIALF---HFFFTQSNIV-----PNIVSYNNVINTHCDEGR-VDVA 174
++ + RA R+ EAI + ++ P +Y N+I C + R ++
Sbjct: 46 VVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQV-CSQTRALEEG 104
Query: 175 LELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLIS 234
+++ HI T+ F P V + L + + G +V+A + EM N+ D +N +++
Sbjct: 105 KKVHEHI-RTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR----DLCSWNVMVN 159
Query: 235 GFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ--- 291
G+ E+G L++A +LFDE+ E+ D + + + +EA+ Y SLM R
Sbjct: 160 GYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLY-SLMQRVPNS 214
Query: 292 ----FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECF 347
F ++ ++ GK+ + LD+ V + M +C
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHG-HIVRAGLDS------DEVLWSSLMDMYGKC- 266
Query: 348 NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 407
G EA F K K DV + ++I R+ ++ E +LF EL
Sbjct: 267 --GCIDEARNIFDKIVEK--------DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER 316
Query: 408 PDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHI 467
P+ T +++A + + +V M G + + + D K + H+
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV 376
Query: 468 LSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYG 510
+ PKPD + +I G G D++L+ +++ G
Sbjct: 377 VDGC----PKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 120/289 (41%), Gaps = 24/289 (8%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
PN++ +N + H AL+LY +I+ P++ T+ + K + E
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLV-YDGVVNATYMEWF 271
+ +L G D V+ +LIS +++ G L+ A+++FD+ R +V Y ++ +
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 272 FNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNF 331
N + L D V+ N ++ + G +A LF M+ + P
Sbjct: 216 IENA---------QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP-- 264
Query: 332 QAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLL 391
+ T +V+ C G ++ R+ + F ++ N +I + + G L
Sbjct: 265 ---DESTMVTVVSACAQSG----SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 392 SEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
A LFE L K DV + TLI Y M +AL +F M+ +G
Sbjct: 318 ETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 158/365 (43%), Gaps = 59/365 (16%)
Query: 96 RAGDLDAASSVARHSTFSS-TRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPN 154
+ G +D A++V FS+ + V + NA++A + R+ +A+ LF + I +
Sbjct: 276 KCGMMDEANTV-----FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM-QEEKIKMD 329
Query: 155 IVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE----- 209
+V+++ I+ + G AL + R ++++ P+ VT + G S G ++
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 210 --ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL--KERCLVYDGVVNA 265
A+ ++ GHG +++V N LI + + +D A +FD L KER +V V+
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP---------VTCNVLLEVLLKHGKKTQAW 316
Y + +G +A++ + + + P V C L L+ GK+ A+
Sbjct: 449 GYSQ----HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASL--AALRIGKQIHAY 502
Query: 317 ALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSK-----AF 371
AL +Q N P + V+ C + + K G+ S+++
Sbjct: 503 ALRNQ--QNAVP------------LFVSNCL--------IDMYAKCGSISDARLVFDNMM 540
Query: 372 AMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALK 431
A + + ++++ + +G EA +F+E+ D T ++ A ID ++
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 432 VFHRM 436
F+RM
Sbjct: 601 YFNRM 605
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 142/337 (42%), Gaps = 47/337 (13%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
VF NA++A R + ++A +F V ++VS+N++I ++ G+ VALE++
Sbjct: 162 VFVGNALVAMYSRCRSLSDARKVF-----DEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 179 RHIIATAPFG--PSAVTYRHL-----TKGFISAGRIVEALDLLREMLNKGHGADSLVYNN 231
+ T FG P +T ++ + G S G+ + + EM+ + V N
Sbjct: 217 SRM--TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-----NMFVGNC 269
Query: 232 LISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQ 291
L+ + + G +D+AN +F + + +V + A Y + GR ++A+ ++ + + +
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ----IGRFEDAVRLFEKMQEEK 325
Query: 292 FKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 351
KM VT + + + G +A + QML + P N T +++ C ++G
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP-----NEVTLISVLSGCASVGA 380
Query: 352 FHEALAT----------FRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 401
RK G + N +I + + + A +F+ L
Sbjct: 381 LMHGKEIHCYAIKYPIDLRKNGHGDENMVI-------NQLIDMYAKCKKVDTARAMFDSL 433
Query: 402 CSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVD 438
K DV T +I Y + + AL++ M +
Sbjct: 434 SPK--ERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 47/304 (15%)
Query: 153 PNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALD 212
PN+ SYN ++ + + ++ +A +L+ I P P V+Y L G+ A A+
Sbjct: 72 PNVFSYNVIVKAYAKDSKIHIARQLFDEI----P-QPDTVSYNTLISGYADARETFAAMV 126
Query: 213 LLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV-----VNATY 267
L + M G D + LI+ + +L K F V G VN +
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFS-------VSGGFDSYSSVNNAF 179
Query: 268 MEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHT 327
+ ++ G +EA+ + + + + V+ N ++ +H + +A AL+ +M+
Sbjct: 180 VTYYSKGGLLREAVSVFYGMDELR---DEVSWNSMIVAYGQHKEGAKALALYKEMI---- 232
Query: 328 PPNFQAVNSDTFNI--MVNECFNLG------KFHEALATFRKAGTKSNSKAFAMDVAGYN 379
F+ D F + ++N +L +FH L KAG NS +G
Sbjct: 233 ---FKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI---KAGFHQNSHV----GSGLI 282
Query: 380 NIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAY-MKMERIDDALKVFHRMVD 438
+ S+ + ++E +F+E+ LSPD+ T+I Y M E ++A+K F +M
Sbjct: 283 DFYSKCGGCDGMYDSEKVFQEI----LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQR 338
Query: 439 AGLR 442
G R
Sbjct: 339 IGHR 342
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 121/344 (35%), Gaps = 80/344 (23%)
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
I+P+ S + VIN +VD+A+ L I+ P + Y ++ +G GR E+
Sbjct: 435 ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLI-PGPMMYNNIIEGMCKEGRSEES 493
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
L LL EM + G N + + L ERC D V
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCI----------------YGCLAERC---DFV-------- 526
Query: 271 FFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPN 330
A+D K + F+ L++ L ++G+ A D + +
Sbjct: 527 --------GALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGH 578
Query: 331 FQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGL 390
A + ++ NE + G L FR + DV Y+ +I C+
Sbjct: 579 MVASTAAIDGLIKNEGVDRG-----LELFRDICANGHCP----DVIAYHVLIKALCKACR 629
Query: 391 LSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNR 450
EA+ LF E+ SK L P V T+ ++ID + K ID L RM
Sbjct: 630 TMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMY------------- 676
Query: 451 VFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKG 494
E + PD Y +I GLCA G
Sbjct: 677 ----------------------EDEKNPDVITYTSLIHGLCASG 698
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ LI+ +D + R + P V + +I A+ +A R EA LF+ ++
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKG- 644
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+ P + +YN++I+ C EG +D L + P +TY L G ++GR EA
Sbjct: 645 LKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEK-NPDVITYTSLIHGLCASGRPSEA 703
Query: 211 LDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
+ EM K + + + LI G + G +A F E++E+
Sbjct: 704 IFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEK 748
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 138/354 (38%), Gaps = 52/354 (14%)
Query: 125 IIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIAT 184
+I + +A + + A+ L H Q+ ++P + YNN+I C EGR + +L+L +
Sbjct: 445 VINCLVKANKVDMAVTLLHDI-VQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM-KD 502
Query: 185 APFGPSAVTYRHLTKGFISAGRIVEALDLLREM-------------------LNKGHGAD 225
A PS T + V ALDLL++M G D
Sbjct: 503 AGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVD 562
Query: 226 SLVYNNLISGFLELGNL----------------DKANELFDELKERCLVYDGVVNATYME 269
+ Y + ++G LG++ D+ ELF ++ D + ++
Sbjct: 563 ACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIK 622
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
R EA + ++ + K T T N +++ K G+ + + +M ++ P
Sbjct: 623 ALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNP 682
Query: 330 NFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKS---NSKAFAMDVAGYNNIISRFC 386
+ T+ +++ G+ EA+ + + K N F + G C
Sbjct: 683 DVI-----TYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG-------LC 730
Query: 387 ENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAG 440
+ G EA F E+ K + PD + +L+ +++ E I+ +F MV G
Sbjct: 731 KCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 27/199 (13%)
Query: 187 FGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKAN 246
F TY + F AGRI + M KG D++ Y +LI G++D A
Sbjct: 118 FKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAM 177
Query: 247 ELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVL 306
L++E+++ V YM+ F +GR +EA + YK ++ + T VL+E L
Sbjct: 178 RLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYL 237
Query: 307 LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK--------------- 351
+ GK +A +F +M + P+ A NI++ + G+
Sbjct: 238 VATGKCEEALDIFFKMQEIGVQPDKAAC-----NILIAKALKFGETSFMTRVLVYMKENG 292
Query: 352 -------FHEALATFRKAG 363
F EAL T + AG
Sbjct: 293 VVLRYPIFVEALETLKAAG 311
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
KG D Y ++ F E G + +F +KE+ ++ D V + + W ++G
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
AM ++ + D + T V+ +++L G+ +A ++ +ML + PN T+
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCH-----TY 230
Query: 340 NIMVNECFNLGKFHEALATFRK 361
+++ GK EAL F K
Sbjct: 231 TVLMEYLVATGKCEEALDIFFK 252
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 13/279 (4%)
Query: 90 RVQSLI-RAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQ 148
R+ SL +AG + A V + +V + NA+++A +K+++ LF+ +
Sbjct: 114 RIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGK 173
Query: 149 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 208
+I P+IVSYN +I C++ + A+ L I P VT+ L G+
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDSLPEAVALLDE-IENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANE---LFDELKERCLVYDGVVNA 265
++ +M+ K D YN + G L N K+ E LF ELK L D
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLG---LANEAKSKELVNLFGELKASGLKPDVFSFN 289
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
+ N G+ EA YK ++ ++ T +LL + K G A LF +
Sbjct: 290 AMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSK 349
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGT 364
V T +V+E K EA + A T
Sbjct: 350 R-----YLVGQTTLQQLVDELVKGSKREEAEEIVKIAKT 383
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 96/213 (45%), Gaps = 7/213 (3%)
Query: 154 NIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL 213
+++S+N +++ + + DV EL+ + P V+Y L K + EA+ L
Sbjct: 143 SVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVAL 202
Query: 214 LREMLNKGHGADSLVYNN-LISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFF 272
L E+ NKG D + +N L+S +L+ G + E++ ++ E+ + D +
Sbjct: 203 LDEIENKGLKPDIVTFNTLLLSSYLK-GQFELGEEIWAKMVEKNVAIDIRTYNARLLGLA 261
Query: 273 NNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQ 332
N + KE ++ + L K + N ++ + GK +A A + +++ + P
Sbjct: 262 NEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRP--- 318
Query: 333 AVNSDTFNIMVNECFNLGKFHEALATFRKAGTK 365
+ TF +++ G F A+ F++ +K
Sbjct: 319 --DKATFALLLPAMCKAGDFESAIELFKETFSK 349
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT-LIDAYMKMERIDDALKV 432
D+ YN +I CE L EA L +E+ +K L PD+ T T L+ +Y+K + + ++
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQ-FELGEEI 237
Query: 433 FHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCA 492
+ +MV+ + + N L K + ++ ++ KPD + +IRG
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 493 KGLLDKSLELLYQVMRYG 510
+G +D++ +++++G
Sbjct: 298 EGKMDEAEAWYKEIVKHG 315
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 51/220 (23%)
Query: 217 MLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGR 276
++ +G + + NN+IS +++ L A+++FDE+ ER +V T M
Sbjct: 31 VIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSER-----NIVTWTTM-------- 77
Query: 277 DKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNS 336
+ Y S GK +A L+ +MLD+ +A N
Sbjct: 78 ----VSGYTS----------------------DGKPNKAIELYRRMLDSEE----EAANE 107
Query: 337 DTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAET 396
++ ++ C +G + + + G K N + DV N+++ + +NG L EA +
Sbjct: 108 FMYSAVLKACGLVGDIQLGILVYERIG-KENLRG---DVVLMNSVVDMYVKNGRLIEANS 163
Query: 397 LFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
F+E+ L P + TLI Y K +D+A+ +FHRM
Sbjct: 164 SFKEI----LRPSSTSWNTLISGYCKAGLMDEAVTLFHRM 199
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 129/304 (42%), Gaps = 20/304 (6%)
Query: 52 PLNAIRPPLQHSPSRDPNAPRLPDSTSALV-----GPRLNLHNRVQSLIR----AGDLDA 102
PL++ R ++ + R + R D AL+ P++ + +LIR A D
Sbjct: 63 PLSS-RYAMELTVQRLAKSQRFSD-IEALIESHKNNPKIKTETFLSTLIRSYGRASMFDH 120
Query: 103 ASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQ-SNIVPNIVSYNNV 161
A + T TV + NA++AA + + LF F + +NI P+ +SY +
Sbjct: 121 AMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGML 180
Query: 162 INTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKG 221
I ++CD G+ + A+E+ R + + + + + G + EA L EM+NKG
Sbjct: 181 IKSYCDSGKPEKAMEIMRD-MEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKG 239
Query: 222 HGADSLVYN-NLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEA 280
D+ VYN L++ E + ++ EL +E+ L D V M + G EA
Sbjct: 240 CDLDNTVYNVRLMNAAKE--SPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEA 297
Query: 281 MDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFN 340
Y+ L + T L+ L +G Q +F + H P+F+ T
Sbjct: 298 KKVYEGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEG 353
Query: 341 IMVN 344
++ N
Sbjct: 354 LVKN 357
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 148/363 (40%), Gaps = 50/363 (13%)
Query: 100 LDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYN 159
LD S+ +H + FT ++ A RA I L H + ++ +
Sbjct: 96 LDLFLSIRKHGLYLHG----FTFPLVLKACTRASSRKLGIDL-HSLVVKCGFNHDVAAMT 150
Query: 160 NVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLN 219
++++ + GR++ A +L+ I P S VT+ L G+ ++GR EA+DL ++M+
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEI----P-DRSVVTWTALFSGYTTSGRHREAIDLFKKMVE 205
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
G DS ++S + +G+LD + ++E + + V T + + G+
Sbjct: 206 MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK--- 262
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
M+ +S+ D + VT + +++ + + LF QML + P D F
Sbjct: 263 -MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKP-------DQF 314
Query: 340 NIM--VNECFNLGKF------------HEALATFRKAGTKSN--SKAFAM---------- 373
+I+ ++ C +LG HE L A + +K AM
Sbjct: 315 SIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Query: 374 ---DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
D+ N IS +NG + + +F + +SPD T L+ + I D L
Sbjct: 375 KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGL 434
Query: 431 KVF 433
+ F
Sbjct: 435 RFF 437
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 148/339 (43%), Gaps = 25/339 (7%)
Query: 99 DLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSY 158
D +AA S+ R FS +P FT N + A + + ++ F + + ++
Sbjct: 112 DHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLF-KVGLERDVHIN 170
Query: 159 NNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 218
+++I + G+V A +L+ I V++ + G+ AG +A+DL R+M
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEITER-----DTVSWNSMISGYSEAGYAKDAMDLFRKME 225
Query: 219 NKGHGADSLVYNNLISGFLELGNLDKANELFDELK-ERCLVYDGVVNATYMEWFFNNGRD 277
+G D +++ LG+L + L +E+ + + + + + + G
Sbjct: 226 EEGFEPDERTLVSMLGACSHLGDL-RTGRLLEEMAITKKIGLSTFLGSKLISMYGKCG-- 282
Query: 278 KEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSD 337
+DS + + ++ K V ++ V ++GK ++A+ LF +M P ++
Sbjct: 283 --DLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSP-----DAG 335
Query: 338 TFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETL 397
T + +++ C ++G AL ++ T ++ + ++ ++ + + G + EA +
Sbjct: 336 TLSTVLSACGSVG----ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 398 FEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRM 436
FE + K + T +I AY +AL +F RM
Sbjct: 392 FEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDRM 426
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 126/318 (39%), Gaps = 56/318 (17%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P V A+++A + Y EA+ LF+ +VP+ ++ V+ + R+ E
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
++ +I T G + V L + G + EA R++ N +S+ ++ L+ G+
Sbjct: 287 IHGKLI-TNGIGSNVVVESSLLDMYGKCGSVREA----RQVFNGMSKKNSVSWSALLGGY 341
Query: 237 LELGNLDKANELFDELKERCLVYDG-------------------------------VVNA 265
+ G +KA E+F E++E+ L G +V +
Sbjct: 342 CQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVES 401
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDN 325
++ + +G A Y + R +T N +L L ++G+ +A + F+ M+
Sbjct: 402 ALIDLYGKSGCIDSASRVYSKMSIRNM----ITWNAMLSALAQNGRGEEAVSFFNDMVKK 457
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF----RKAGTKSNSKAFAMDVAGYNNI 381
P++ +F ++ C + G E F + G K ++ Y+ +
Sbjct: 458 GIKPDYI-----SFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH-------YSCM 505
Query: 382 ISRFCENGLLSEAETLFE 399
I GL EAE L E
Sbjct: 506 IDLLGRAGLFEEAENLLE 523
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 132/323 (40%), Gaps = 28/323 (8%)
Query: 212 DLLREMLNKGHGADS--LVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 269
DL+ +L+ + S LV++ L+ + ++ L+ ++F L + + T +
Sbjct: 148 DLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIH 207
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPP 329
+ + D Y+ +D++ +T ++++VL K G+ + L D++ P
Sbjct: 208 YSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLP 267
Query: 330 NFQAVNSDTFNIM----VNECFNLGK------------------FHEA----LATFRKAG 363
+ S F ++ + E +L K + +A L + RK
Sbjct: 268 SVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVF 327
Query: 364 TKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKM 423
+ + F+ + Y + CE G + EAE L E+ +SP T LI + +
Sbjct: 328 DEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARF 387
Query: 424 ERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCY 483
+ L+ MV GL + N + + K + V IL+K ++ PD Y
Sbjct: 388 GWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTY 447
Query: 484 EVVIRGLCAKGLLDKSLELLYQV 506
+IRG +D++L+L Y++
Sbjct: 448 SHLIRGFIEGNDIDQALKLFYEM 470
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 157/426 (36%), Gaps = 66/426 (15%)
Query: 80 LVGPRLNLHNRVQSLIRAG------DLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAK 133
LV RL + R +LI + D D S+ SS+ P VF ++ Y
Sbjct: 123 LVKARLLIDAR--ALIESSLLNSPPDSDLVDSLLDTYEISSSTPLVFD---LLVQCYAKI 177
Query: 134 RYNEAIALFHFF--FTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSA 191
RY E F F ++++ N +I+ D+ +Y I + P+
Sbjct: 178 RYLEL--GFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIY-PNE 234
Query: 192 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 251
+T R + + GR+ E +DLL + K
Sbjct: 235 ITIRIMIQVLCKEGRLKEVVDLLDRICGK------------------------------- 263
Query: 252 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 311
RCL +VN + + R +E+M K L+ + + + ++++ K G
Sbjct: 264 ---RCLP-SVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGD 319
Query: 312 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA---LATFRKAGTKSNS 368
A +FD+ML F A NS + + V C G EA L+ ++G
Sbjct: 320 LVSARKVFDEMLQR----GFSA-NSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYD 374
Query: 369 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDD 428
+ F + G+ +RF G + E + ++ L P ++ + K+E ++
Sbjct: 375 ETFNCLIGGF----ARF---GWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNR 427
Query: 429 ALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIR 488
A ++ + +D G + + + I+ + + + +M R P + +I
Sbjct: 428 ANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIV 487
Query: 489 GLCAKG 494
GLC G
Sbjct: 488 GLCTCG 493
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 158/391 (40%), Gaps = 41/391 (10%)
Query: 106 VARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVP--NIVSYNNVIN 163
+ RH F+ RP +F N +I + N+A H F Q +P N++S+ +I+
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA----HQLFDQ---MPQRNVISWTTMIS 135
Query: 164 THCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHG 223
+ ALEL ++ P+ TY + + S + + L ++ +G
Sbjct: 136 AYSKCKIHQKALELLV-LMLRDNVRPNVYTYSSVLR---SCNGMSDVRMLHCGIIKEGLE 191
Query: 224 ADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDS 283
+D V + LI F +LG + A +FDE+ + D +V + + F N R A++
Sbjct: 192 SDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALEL 247
Query: 284 YKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF--NI 341
+K + F T +L + AL + + H + + D N
Sbjct: 248 FKRMKRAGFIAEQATLTSVL-------RACTGLALLELGMQAHV--HIVKYDQDLILNNA 298
Query: 342 MVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEEL 401
+V+ G +AL F + + DV ++ +IS +NG EA LFE +
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKER--------DVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 402 CSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDA-GLRVVTNFCNRVFDELIKNDK 460
S P+ T ++ A ++D F M G+ V + D L K K
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGK 410
Query: 461 VIDCAHILSKMGERDPKPDPTCYEVVIRGLC 491
+ D +L++M + +PD + ++ G C
Sbjct: 411 LDDAVKLLNEM---ECEPDAVTWRTLL-GAC 437
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 82/285 (28%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFT--QSNIVPNIVSYNNVINTHCDEGRVDV 173
+P+ T I+ M ++YN L H FF Q + +PN ++Y ++NT EG+ D
Sbjct: 625 KPSPVTYGLIMEVMLACEKYN----LVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDE 680
Query: 174 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDL--------LREMLNKGHGAD 225
A+ + + G +A+ Y L + SAGR E L++ L+ + N + AD
Sbjct: 681 AVHTVEDMESRGIVGSAALYY-DLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKAD 739
Query: 226 --------------------SLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNA 265
+ Y LI ++ GN+ A +FD++K+ C
Sbjct: 740 LVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVC--------- 790
Query: 266 TYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP--VTCNVLLEVLLKHGKKTQAWALFDQML 323
+P VTCN++L+ L+ G +A LF +M
Sbjct: 791 -----------------------------SPNLVTCNIMLKAYLQGGLFEEARELFQKMS 821
Query: 324 D--NHTP--PNFQAV---NSDTFNIMVNECFNLGKFHEALATFRK 361
+ NH +F++ ++ TFN M++ C K+ + +R+
Sbjct: 822 EDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYRE 866
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 132/327 (40%), Gaps = 53/327 (16%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
V T N ++ ++ RAK EA LF + PN+++Y ++N C + A ++
Sbjct: 264 VETINCLLDSLGRAKLGKEAQVLFDKL--KERFTPNMMTYTVLLNGWCRVRNLIEAARIW 321
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+I P V + + +G + + + +A+ L M +KG + Y +I F +
Sbjct: 322 NDMIDQG-LKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 380
Query: 239 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP-- 296
+++ A E FD++ + L D V + F G K+ Y+ L + Q K P
Sbjct: 381 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPD 437
Query: 297 -VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
T N L++++ A ++++M+ N P+ TFN+++ F
Sbjct: 438 GKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIH-----TFNMIMKSYF-------- 484
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
++R E G ++EE+ K + PD ++
Sbjct: 485 --------------------------MARNYEMG-----RAVWEEMIKKGICPDDNSYTV 513
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLR 442
LI + + +A + M+D G++
Sbjct: 514 LIRGLIGEGKSREACRYLEEMLDKGMK 540
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 120/278 (43%), Gaps = 29/278 (10%)
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
+G DS YN+++S + + + +E+ + L+ M+ F K+
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA-MKAFAAAKERKK 247
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
A+ ++ + +FK+ T N LL+ L + +A LFD++ + TP N T+
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP------NMMTY 301
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
+++N + EA + + D+ +N ++ + S+A LF
Sbjct: 302 TVLLNGWCRVRNLIEAARIW----NDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH 357
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--------VVTNFCNRV 451
+ SK P+V ++ +I + K ++ A++ F MVD+GL+ ++T F +
Sbjct: 358 VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ- 416
Query: 452 FDELIKNDKVIDCAH-ILSKMGERDPKPDPTCYEVVIR 488
K +D + +L +M E+ PD Y +I+
Sbjct: 417 --------KKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
F + V N ++ L EA+ LF++L + +P++ T+ L++ + ++ + +A
Sbjct: 260 FKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAA 318
Query: 431 KVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
++++ M+D GL+ N + + L+++ K D + M + P P+ Y ++IR
Sbjct: 319 RIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDF 378
Query: 491 CAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPP 548
C + ++ ++E ++ G+ ++ + F + D + LL + PP
Sbjct: 379 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 436
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 112 FSSTRPTVFTCNAI--IAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEG 169
F R FT A+ A+ + R +EA+ LF N +P++V++ ++ + + G
Sbjct: 188 FHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQI-KDKNRMPDVVAHTAIVEAYANAG 246
Query: 170 RVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI-VEALDLLREMLNKGHGADSLV 228
+ L+++ ++A+ P+A TY L KG + G+ +A L EM+ G ++
Sbjct: 247 QAKETLKVFMRMLASG-VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAAT 305
Query: 229 YNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEW 270
Y + F+ G + A EL E+K + V D +E+
Sbjct: 306 YTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEY 347
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 162/424 (38%), Gaps = 51/424 (12%)
Query: 87 LHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFF 146
L R++ L R + +A + F +P CN+ ++ + R +A +F F
Sbjct: 110 LSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMR 169
Query: 147 TQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGR 206
+ N+ + +Y+ ++ + + AL ++R + P S GR
Sbjct: 170 KKENVTGH--TYSLMLKAVAEVKGCESALRMFRE-LEREPKRRSCFDVVLYNTAISLCGR 226
Query: 207 I---VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVV 263
I E + R M GH + Y+ L+S F+ RC
Sbjct: 227 INNVYETERIWRVMKGDGHIGTEITYSLLVSIFV-----------------RC------- 262
Query: 264 NATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQML 323
GR + A+D Y +++ + + ++ K K A +F ML
Sbjct: 263 -----------GRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSML 311
Query: 324 DNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIIS 383
PN A N+ ++N +LGK + F K + S D +N +++
Sbjct: 312 KKGMKPNLVACNT-----LIN---SLGKAGKVGLVF-KVYSVLKSLGHKPDEYTWNALLT 362
Query: 384 RFCENGLLSEAETLFEELCSKSLSP-DVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR 442
+ + LF+ + S++L + + T + + K+ + A+K+ + M +GL
Sbjct: 363 ALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLT 422
Query: 443 VVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLEL 502
V T+ N V K+ K + M +RD KP+ Y ++R L D+ ++
Sbjct: 423 VSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDI 482
Query: 503 LYQV 506
L +V
Sbjct: 483 LKKV 486
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
Query: 84 RLNLHNRVQ-SLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALF 142
RL + NR+ + +D + + +P V T N+++ + RA NE + +
Sbjct: 176 RLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVL 235
Query: 143 HFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFI 202
++ NI++YN V+N R D+ L +Y ++ P ++Y +
Sbjct: 236 STMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCG-IEPDLLSYTAVIDSLG 294
Query: 203 SAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELK 253
+G + E+L L EM + VY LI + G+ A +L DELK
Sbjct: 295 RSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 89 NRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQ 148
N ++ I D +S+ + + SS + N II A ++ ++ + + +
Sbjct: 147 NLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEM-KE 205
Query: 149 SNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIV 208
P++++YN+V++ G V+ L + + + +TY + G A R
Sbjct: 206 WECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFD 265
Query: 209 EALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKER 255
L + EM+ G D L Y +I GN+ ++ LFDE+K+R
Sbjct: 266 MCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQR 312
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 156/385 (40%), Gaps = 43/385 (11%)
Query: 68 PNAPRLPDSTSALVGP----RLNLHNRVQSLIRAGDLDAASSVARHSTFSSTRPTVFTCN 123
P A R+ D+ + V R++ + ++ + D ++A + +P T
Sbjct: 204 PKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWT 263
Query: 124 AIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGR-VDVALELYRHII 182
++++ + ++ + + FH N V V + C E + +A +++ ++I
Sbjct: 264 SVLSCHSQCGKFEDVLKYFHLMRMSGNAVSG--EALAVFFSVCAELEALSIAEKVHGYVI 321
Query: 183 ATA--PFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
+ PS H+ + G++ +A L R++ NKG + +N+LI+ F++ G
Sbjct: 322 KGGFEEYLPSRNALIHV---YGKQGKVKDAEHLFRQIRNKGIES----WNSLITSFVDAG 374
Query: 241 NLDKANELFDELKER---CLVYDGVVNATYMEWFFN-NGRDKEAMDSYKSLMDRQFKMTP 296
LD+A LF EL+E C V VV T + N GR ++++ ++ + +
Sbjct: 375 KLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANS 434
Query: 297 VTCNVLLEVL-----LKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGK 351
VT +L + L G++ + M +N N +VN G
Sbjct: 435 VTICCILSICAELPALNLGREIHGHVIRTSMSENILVQ----------NALVNMYAKCGL 484
Query: 352 FHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVP 411
E F K D+ +N+II + +G +A ++F+ + S PD
Sbjct: 485 LSEGSLVFEAIRDK--------DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGI 536
Query: 412 THRTLIDAYMKMERIDDALKVFHRM 436
++ A ++ ++F+ M
Sbjct: 537 ALVAVLSACSHAGLVEKGREIFYSM 561
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 142/324 (43%), Gaps = 35/324 (10%)
Query: 120 FTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVP--NIVSYNNVINTHCDEGRVDVALEL 177
++ N +++ +A + A LF N +P ++V+ N++++ + G + AL L
Sbjct: 125 YSWNVVVSGFAKAGELSVARRLF-------NAMPEKDVVTLNSLLHGYILNGYAEEALRL 177
Query: 178 YRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFL 237
++ + F A+T + K + + ++L G DS + ++L++ +
Sbjct: 178 FKEL----NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYA 233
Query: 238 ELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPV 297
+ G+L A+ + ++++E D + + + N GR E+ + L DR+ +
Sbjct: 234 KCGDLRMASYMLEQIREP----DDHSLSALISGYANCGRVNES----RGLFDRKSNRCVI 285
Query: 298 TCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALA 357
N ++ + + K +A LF++M N T + S T ++N C LG L
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEM-RNETRED-----SRTLAAVINACIGLG----FLE 335
Query: 358 TFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLI 417
T ++ + D+ + ++ + + G EA LF E+ S D ++I
Sbjct: 336 TGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV----ESYDTILLNSMI 391
Query: 418 DAYMKMERIDDALKVFHRMVDAGL 441
Y RIDDA +VF R+ + L
Sbjct: 392 KVYFSCGRIDDAKRVFERIENKSL 415
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 157/380 (41%), Gaps = 64/380 (16%)
Query: 197 LTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF----LELGNLDKANELFDEL 252
L G+ + GR+ E+ R + ++ +++N++ISG+ +++ L NE+ +E
Sbjct: 259 LISGYANCGRVNES----RGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNET 314
Query: 253 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 312
+E V+NA F G+ L+D V + LL++ K G
Sbjct: 315 REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLID-----DIVVASTLLDMYSKCGSP 369
Query: 313 TQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFA 372
+A LF ++ ++ ++ N M+ F+ G+ +A F + KS
Sbjct: 370 MEACKLFSEV---------ESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKS------ 414
Query: 373 MDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKV 432
+ +N++ + F +NG E F ++ L D + ++I A + ++ +V
Sbjct: 415 --LISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV 472
Query: 433 FHRMVDAGL---RVVTN-----FCN--------RVFDELIKNDKV--------------- 461
F R GL +VV++ +C RVFD ++K+D+V
Sbjct: 473 FARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQG 532
Query: 462 IDCAHILSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGVTNSLREF- 520
+ + KM +P + VV+ GL+++ + L++ M+ G F
Sbjct: 533 FEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRK-LFESMKVDHGFVPDKEHFS 591
Query: 521 -VTEVFKKAGRGDEIERLLD 539
+ ++ +AG +E L++
Sbjct: 592 CMVDLLARAGYVEEAINLVE 611
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 334 VNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSE 393
VN TF I++ + + + + F N + +V N + C+ L+ E
Sbjct: 144 VNDKTFRIVLKTLASARELKKCVNYFHLM----NGFGYLYNVETMNRGVETLCKEKLVEE 199
Query: 394 AETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFD 453
A+ +F +L + + PD T+RT+I + + + +A K+++ M+D G V ++ +
Sbjct: 200 AKFVFIKL-KEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIME 258
Query: 454 ELIKNDKVIDCAHILSKM-GERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVG 512
L+K ++ + + + M +R D Y V+I LC G +D + ++ ++ GV
Sbjct: 259 TLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVY 318
Query: 513 VTN 515
V N
Sbjct: 319 VDN 321
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 4/201 (1%)
Query: 121 TCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRH 180
T ++ + A+ + + FH + N+ + N + T C E V+ A ++
Sbjct: 148 TFRIVLKTLASARELKKCVNYFHLM-NGFGYLYNVETMNRGVETLCKEKLVEEAKFVF-- 204
Query: 181 IIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELG 240
I P +TYR + +GF G ++EA L M+++G D ++ L+
Sbjct: 205 IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKN 264
Query: 241 NLDKANELFDEL-KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTC 299
D+A+++F + +R DG ++W NGR A + + +R + +T
Sbjct: 265 QFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTW 324
Query: 300 NVLLEVLLKHGKKTQAWALFD 320
L+ LL + +A+ L +
Sbjct: 325 ASLIYGLLVKRRVVEAYGLVE 345
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
D Y +I FC+ G L EA L+ + + D+ + +++ +K + D+A KVF
Sbjct: 214 DEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVF 273
Query: 434 HRMVDA-GLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGLCA 492
+ MV G + F + D L KN ++ + +M ER D + +I GL
Sbjct: 274 YVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLV 333
Query: 493 K 493
K
Sbjct: 334 K 334
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 142/353 (40%), Gaps = 31/353 (8%)
Query: 192 VTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDE 251
V Y L G ++ G I +AL L R G DS+ + +I G + G +A E F E
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 252 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGK 311
+K + L D + + G E + ++ F+ + L+++ K
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 312 KTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATF---RKAGTKSNS 368
A +FD+M + N ++ MV G+ EA+ F +++G +
Sbjct: 321 LHYAKTVFDRM---------KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 369 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDD 428
++ N+ S L E + + L V +L+ Y K IDD
Sbjct: 372 YTLGQAISACANVSS-------LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 429 ALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIR 488
+ ++F+ M +R ++ V + + ++ + KM + KPD VI
Sbjct: 425 STRLFNEM---NVRDAVSWTAMV-SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Query: 489 GLCAKGLLDKSLELLYQVMRYGVGVTNSLREF--VTEVFKKAGRGDEIERLLD 539
GL++K + +++M G+ S+ + + ++F ++GR +E R ++
Sbjct: 481 ACSRAGLVEKG-QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFIN 532
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 12/257 (4%)
Query: 101 DAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNN 160
D + TF+ RP + NAI+ ++ K+Y + I + + P++++YN
Sbjct: 205 DVVEQFIKSKTFNY-RPYKHSYNAILHSLLGVKQY-KLIDWVYEQMLEDGFTPDVLTYNI 262
Query: 161 VINTHCDEGRVDVALELYRHI--IATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREML 218
V+ + G+ D LYR + + F P TY L + + + AL+LL M
Sbjct: 263 VMFANFRLGKTD---RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMR 319
Query: 219 NKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDK 278
G + + LI G G L+ DE + D V + + + G +
Sbjct: 320 EVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELE 379
Query: 279 EAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDT 338
+A + +K + ++ T N ++ GK +A AL +M PNF
Sbjct: 380 KAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVV----- 434
Query: 339 FNIMVNECFNLGKFHEA 355
++ +VN N GK EA
Sbjct: 435 YSTLVNNLKNAGKVLEA 451
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 148 QSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRI 207
+ + P ++ + +I+ G+++ A + + P V Y + G+IS G +
Sbjct: 320 EVGVEPGVIHFTTLIDGLSRAGKLE-ACKYFMDETVKVGCTPDVVCYTVMITGYISGGEL 378
Query: 208 VEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATY 267
+A ++ +EM KG + YN++I GF G +A L E++ R + VV +T
Sbjct: 379 EKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTL 438
Query: 268 MEWFFNNGRDKEAMDSYKSLMDR 290
+ N G+ EA + K ++++
Sbjct: 439 VNNLKNAGKVLEAHEVVKDMVEK 461
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
Query: 91 VQSLIRAGDLDAASSVARHSTFSSTRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSN 150
+ L RAG L+A + P V +I +A +F T+
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM-TEKG 392
Query: 151 IVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEA 210
+PN+ +YN++I C G+ A L + + + P+ V Y L +AG+++EA
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEM-ESRGCNPNFVVYSTLVNNLKNAGKVLEA 451
Query: 211 LDLLREMLNKGHGADSLVYNNLIS 234
+++++M+ KGH Y +LIS
Sbjct: 452 HEVVKDMVEKGH------YVHLIS 469
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 2/208 (0%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P V T N ++ A +R + + L + P++ +YN +++ + AL
Sbjct: 255 PDVLTYNIVMFANFRLGKTDRLYRLLDEM-VKDGFSPDLYTYNILLHHLATGNKPLAALN 313
Query: 177 LYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGF 236
L H+ P + + L G AG++ + E + G D + Y +I+G+
Sbjct: 314 LLNHM-REVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGY 372
Query: 237 LELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP 296
+ G L+KA E+F E+ E+ + + + + F G+ KEA K + R
Sbjct: 373 ISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNF 432
Query: 297 VTCNVLLEVLLKHGKKTQAWALFDQMLD 324
V + L+ L GK +A + M++
Sbjct: 433 VVYSTLVNNLKNAGKVLEAHEVVKDMVE 460
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 111/262 (42%), Gaps = 17/262 (6%)
Query: 143 HFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYRHLTKGFI 202
+ FT+ N++S+N+VI+ G+ + A+EL+ + + P + T+ L GF
Sbjct: 286 YIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL-DSEGLKPDSATWNSLISGFS 344
Query: 203 SAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGV 262
G+++EA ML+ +L+S ++ L E+ + + D
Sbjct: 345 QLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIF 404
Query: 263 VNATYMEWFFNNGRDKEAMDSYKSLMDRQFK---MTPVTCNVLLEVLLKHGKKTQAWALF 319
V + ++ + G A + + DR F+ PV NV++ KHG+ A +F
Sbjct: 405 VLTSLIDMYMKCGLSSWA----RRIFDR-FEPKPKDPVFWNVMISGYGKHGECESAIEIF 459
Query: 320 DQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYN 379
+ + + P+ TF +++ C + G + FR + K +
Sbjct: 460 ELLREEKVEPSLA-----TFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMI 514
Query: 380 NIISRFCENGLLSEAETLFEEL 401
+++ R +G L EA+ + +++
Sbjct: 515 DLLGR---SGRLREAKEVIDQM 533
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 40/171 (23%)
Query: 374 DVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVF 433
++ +N++IS NG A LFE+L S+ L PD T +LI + ++ ++ +A K F
Sbjct: 297 NLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFF 356
Query: 434 HRMVDA----GLRVVTNF---CNRVFDELIKNDKVIDCAHILSKMGERD----------- 475
RM+ L+ +T+ C+ ++ +KN K I H++ ERD
Sbjct: 357 ERMLSVVMVPSLKCLTSLLSACSDIWT--LKNGKEIH-GHVIKAAAERDIFVLTSLIDMY 413
Query: 476 -----------------PKP-DPTCYEVVIRGLCAKGLLDKSLELLYQVMR 508
PKP DP + V+I G G + ++E +++++R
Sbjct: 414 MKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIE-IFELLR 463
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 26/311 (8%)
Query: 153 PNIVSYNNVINTHCDEGRV---DVALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVE 209
P I ++N +++ C G V + L RH + P A T+ L G+ +
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHRV-----KPDANTFNVLFFGWCRVRDPKK 286
Query: 210 ALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYME 269
A+ LL EM+ GH ++ Y I F + G +D+A +LFD + + T+
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL 346
Query: 270 WFFNNGRDKEAMDSYKSLMDRQFKMTPV----TCNVLLEVLLKHGKKTQAWALFDQMLDN 325
++ +A + ++ L+ R + T ++E + K +A+ D+M +
Sbjct: 347 MIVALAKNDKAEECFE-LIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 326 HTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRF 385
PP+ T+N + K EAL + G S+ A V YN +IS F
Sbjct: 406 GYPPDIV-----TYNCFLRVLCENRKTDEALKLY---GRMVESRC-APSVQTYNMLISMF 456
Query: 386 CENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVT 445
E A + E+ + DV T+ +I+ R +A + +V+ GL++
Sbjct: 457 FEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPY 516
Query: 446 NFCNRVFDELI 456
RVFD +
Sbjct: 517 ----RVFDSFL 523
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 15/265 (5%)
Query: 116 RPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIV--PNIVSYNNVINTHCDEGRVDV 173
+P FT A I +A +EA LF F T+ + V P ++ +I + +
Sbjct: 300 KPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEE 359
Query: 174 ALELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLI 233
EL +I+T P TY+ + +G A ++ EA L EM NKG+ D + YN +
Sbjct: 360 CFELIGRMISTGCL-PDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFL 418
Query: 234 SGFLELGNLDKANELFDELKE-RCL----VYDGVVNATYMEWFFNNGRDKEAMDSYKSLM 288
E D+A +L+ + E RC Y+ +++ FF A +++ +
Sbjct: 419 RVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS-----MFFEMDDPDGAFNTWTEMD 473
Query: 289 DRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFN 348
R T ++ L + +A L +++++ ++ D+F + ++E N
Sbjct: 474 KRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVF--DSFLMRLSEVGN 531
Query: 349 LGKFHEALATFRKAGTKSNSKAFAM 373
L H+ +K S ++ FA+
Sbjct: 532 LKAIHKVSEHMKKFYNHSMARRFAL 556
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 9/286 (3%)
Query: 229 YNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRD-KEAMDSYKSL 287
+N L+ + G + + L ++ R N + W RD K+AM + +
Sbjct: 237 FNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGW--CRVRDPKKAMKLLEEM 294
Query: 288 MDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECF 347
++ K T ++ + G +A LFD M+ + + A + TF +M+
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVS--APTAKTFALMI---V 349
Query: 348 NLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLS 407
L K +A F G ++ DV+ Y ++I C + EA +E+ +K
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLP-DVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 408 PDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHI 467
PD+ T+ + + + D+ALK++ RMV++ N + + D +
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNT 468
Query: 468 LSKMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGVGV 513
++M +RD D Y +I GL ++ LL +V+ G+ +
Sbjct: 469 WTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKL 514
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 131/327 (40%), Gaps = 53/327 (16%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
V T N ++ ++ RAK EA LF + PN+++Y ++N C + A ++
Sbjct: 263 VETINCLLDSLGRAKLGKEAQVLFDKL--KERFTPNMMTYTVLLNGWCRVRNLIEAARIW 320
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+I P V + + +G + + + +A+ L M +KG + Y +I F +
Sbjct: 321 NDMIDHG-LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 379
Query: 239 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP-- 296
+++ A E FD++ + L D V + F G K+ Y+ L + Q K P
Sbjct: 380 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPD 436
Query: 297 -VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
T N L++++ ++++M+ N P+ TFN+++ F
Sbjct: 437 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH-----TFNMIMKSYF-------- 483
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
++R E G +++E+ K + PD ++
Sbjct: 484 --------------------------VARNYEMG-----RAVWDEMIKKGICPDDNSYTV 512
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLR 442
LI + + +A + M+D G++
Sbjct: 513 LIRGLISEGKSREACRYLEEMLDKGMK 539
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 29/278 (10%)
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
+G DS YN+++S + + + +E+ + L+ M+ F K+
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA-MKAFAAAKERKK 246
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
A+ ++ + +FK+ T N LL+ L + +A LFD++ + TP N T+
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP------NMMTY 300
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
+++N + EA + D+ +N ++ + S+A LF
Sbjct: 301 TVLLNGWCRVRNLIEAARIW----NDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH 356
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--------VVTNFCNRV 451
+ SK P+V ++ +I + K ++ A++ F MVD+GL+ ++T F +
Sbjct: 357 VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ- 415
Query: 452 FDELIKNDKVIDCAH-ILSKMGERDPKPDPTCYEVVIR 488
K +D + +L +M E+ PD Y +I+
Sbjct: 416 --------KKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
F + V N ++ L EA+ LF++L + +P++ T+ L++ + ++ + +A
Sbjct: 259 FKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAA 317
Query: 431 KVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
++++ M+D GL+ N + + L+++ K D + M + P P+ Y ++IR
Sbjct: 318 RIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDF 377
Query: 491 CAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPP 548
C + ++ ++E ++ G+ ++ + F + D + LL + PP
Sbjct: 378 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 435
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 123 NAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHII 182
NA++ A+ +A +EA L + I PN+V+YN++I C + + A +++ ++
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 183 ATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNL 242
F P+ TY H + G E +LL +M G Y LI +
Sbjct: 401 EKGLF-PTIRTY-HAFMRILRTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDF 456
Query: 243 DKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDR 290
D L+DE+KE+ + D + F NG+ +EA YK + D+
Sbjct: 457 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 145/377 (38%), Gaps = 35/377 (9%)
Query: 135 YNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTY 194
+ A F + Q V ++ Y+++I+ + D A L + +P ++ T
Sbjct: 141 WETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTL 200
Query: 195 RHLTKGFISAGRIVEALDLLR--EMLNKGHGADSLVYNNLISGFLELGNLDKANELFDEL 252
+ + + + + +A++ + G D + +L+S N+ A L
Sbjct: 201 LIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDD--FQSLLSALCRYKNVSDAGHLIFCN 258
Query: 253 KERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKK 312
K++ N W G +EA + + + K V+ + ++ K G
Sbjct: 259 KDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSL 318
Query: 313 TQAWALFDQMLDNHTPPNFQAVNSDTFNI----MVNECFNLGKFHEALATFRKAGTKSNS 368
+ LFD+M P+ + N+ + V+E NL K T
Sbjct: 319 NKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMK------------TMEEE 366
Query: 369 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDD 428
K +V YN++I C+ EA+ +F+E+ K L P + T+ + E + +
Sbjct: 367 KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFE 426
Query: 429 ALKVFHRM-----VDAGLRVVTNFCN-RVFDELIKNDKVIDCAHILSKMGERDPKPDPTC 482
L +M V+ + ++ C R FD ++ + +M E+ PD +
Sbjct: 427 LLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVL---------LLWDEMKEKTVGPDLSS 477
Query: 483 YEVVIRGLCAKGLLDKS 499
Y V+I GL G ++++
Sbjct: 478 YIVMIHGLFLNGKIEEA 494
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 131/327 (40%), Gaps = 53/327 (16%)
Query: 119 VFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELY 178
V T N ++ ++ RAK EA LF + PN+++Y ++N C + A ++
Sbjct: 264 VETINCLLDSLGRAKLGKEAQVLFDKL--KERFTPNMMTYTVLLNGWCRVRNLIEAARIW 321
Query: 179 RHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLE 238
+I P V + + +G + + + +A+ L M +KG + Y +I F +
Sbjct: 322 NDMIDHG-LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 380
Query: 239 LGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTP-- 296
+++ A E FD++ + L D V + F G K+ Y+ L + Q K P
Sbjct: 381 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF---GTQKKLDTVYELLKEMQEKGHPPD 437
Query: 297 -VTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEA 355
T N L++++ ++++M+ N P+ TFN+++ F
Sbjct: 438 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH-----TFNMIMKSYF-------- 484
Query: 356 LATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRT 415
++R E G +++E+ K + PD ++
Sbjct: 485 --------------------------VARNYEMG-----RAVWDEMIKKGICPDDNSYTV 513
Query: 416 LIDAYMKMERIDDALKVFHRMVDAGLR 442
LI + + +A + M+D G++
Sbjct: 514 LIRGLISEGKSREACRYLEEMLDKGMK 540
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 118/278 (42%), Gaps = 29/278 (10%)
Query: 220 KGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKE 279
+G S YN+++S + + + +E+ + L+ M+ F K+
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIA-MKAFAAAKERKK 247
Query: 280 AMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTF 339
A+ ++ + +FK+ T N LL+ L + +A LFD++ + TP N T+
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP------NMMTY 301
Query: 340 NIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFE 399
+++N + EA + D+ +N ++ + S+A LF
Sbjct: 302 TVLLNGWCRVRNLIEAARIW----NDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH 357
Query: 400 ELCSKSLSPDVPTHRTLIDAYMKMERIDDALKVFHRMVDAGLR--------VVTNFCNRV 451
+ SK P+V ++ +I + K ++ A++ F MVD+GL+ ++T F +
Sbjct: 358 VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ- 416
Query: 452 FDELIKNDKVIDCAH-ILSKMGERDPKPDPTCYEVVIR 488
K +D + +L +M E+ PD Y +I+
Sbjct: 417 --------KKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 371 FAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDDAL 430
F + V N ++ L EA+ LF++L + +P++ T+ L++ + ++ + +A
Sbjct: 260 FKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAA 318
Query: 431 KVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILSKMGERDPKPDPTCYEVVIRGL 490
++++ M+D GL+ N + + L+++ K D + M + P P+ Y ++IR
Sbjct: 319 RIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDF 378
Query: 491 CAKGLLDKSLELLYQVMRYGVGVTNSLREFVTEVFKKAGRGDEIERLLDFNTPRYRPP 548
C + ++ ++E ++ G+ ++ + F + D + LL + PP
Sbjct: 379 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 436
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 22/282 (7%)
Query: 235 GFLELGNLDKANELFDELKER----CLVYDGVVNATYMEWFFNNGRDK-EAMDSYKSLMD 289
G +LG +A LFD+LKER + Y ++N + R+ EA + ++D
Sbjct: 275 GRAKLGK--EAQVLFDKLKERFTPNMMTYTVLLNG------WCRVRNLIEAARIWNDMID 326
Query: 290 RQFKMTPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNL 349
K V NV+LE LL+ KK+ A LF M PN + ++ IM+ +
Sbjct: 327 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR-----SYTIMIRDFCKQ 381
Query: 350 GKFHEALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPD 409
A+ F D A Y +I+ F L L +E+ K PD
Sbjct: 382 SSMETAIEYF----DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 410 VPTHRTLIDAYMKMERIDDALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAHILS 469
T+ LI + + +++++M+ + + N + +
Sbjct: 438 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWD 497
Query: 470 KMGERDPKPDPTCYEVVIRGLCAKGLLDKSLELLYQVMRYGV 511
+M ++ PD Y V+IRGL ++G ++ L +++ G+
Sbjct: 498 EMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 124/325 (38%), Gaps = 53/325 (16%)
Query: 117 PTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALE 176
P+ +T NA++ + R ++ E + + + ++ +I+ C G VD A E
Sbjct: 141 PSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATE 200
Query: 177 LYRHI------------------------------------IATAPFGPSAVTYRHLTKG 200
L R++ + F P Y + +
Sbjct: 201 LVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRF 260
Query: 201 FISAGRIVEALDLLREMLNKGHGADSLVYNNLISGFLELGNLDKANELFDELKERCLVYD 260
+ GR E + +L +M D + Y ++ G + + KA++LFDEL L D
Sbjct: 261 LVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPD 320
Query: 261 GVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKMTPVTCNVLLEVLLKHGKKTQAWALFD 320
Y+ + A+ S+ + VT N+L++ L+K G ++A L+
Sbjct: 321 VYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWK 380
Query: 321 QMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNSKAFAMDV----A 376
+M N NS TF+IM++ + + A +AF M+V +
Sbjct: 381 EMETNGVNR-----NSHTFDIMISAYIEVDEVVCAHGLL--------EEAFNMNVFVKSS 427
Query: 377 GYNNIISRFCENGLLSEAETLFEEL 401
+ISR CE GL+ +A L L
Sbjct: 428 RIEEVISRLCEKGLMDQAVELLAHL 452
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 162/376 (43%), Gaps = 24/376 (6%)
Query: 136 NEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVALELYRHIIATAPFGPSAVTYR 195
N + L+H ++ P + + +VI + GR++ A+E++ I PSA T
Sbjct: 90 NISSVLYHLEVSEKFDTPESI-FRDVIAAYGFSGRIEEAIEVFFKI-PNFRCVPSAYTLN 147
Query: 196 HLTKGFISAGRIVEALDLLREMLNK----GHGADSLVYNNLISGFLELGNLDKANELFDE 251
L + R ++L+L+ E+L K G + + LI +G +D A EL
Sbjct: 148 ALLLVLV---RKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRY 204
Query: 252 LKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMD-RQFKMTP--VTCNVLLEVLLK 308
+ + ++ D + + + + +D D L D R+ + +P V++ L++
Sbjct: 205 MSQDSVIVDPRLYSRLLSSVCKH-KDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVE 263
Query: 309 HGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHEALATFRKAGTKSNS 368
G+ + ++ +QM + P+ + I++ + +A F +
Sbjct: 264 GGRGKEVVSVLNQMKCDRVEPDLVC-----YTIVLQGVIADEDYPKADKLF----DELLL 314
Query: 369 KAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHRTLIDAYMKMERIDD 428
A DV YN I+ C+ + A + + P+V T+ LI A +K +
Sbjct: 315 LGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSR 374
Query: 429 ALKVFHRMVDAGLRVVTNFCNRVFDELIKNDKVIDCAH-ILSKMGERDPKPDPTCYEVVI 487
A ++ M G+ ++ + + I+ D+V+ CAH +L + + + E VI
Sbjct: 375 AKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVV-CAHGLLEEAFNMNVFVKSSRIEEVI 433
Query: 488 RGLCAKGLLDKSLELL 503
LC KGL+D+++ELL
Sbjct: 434 SRLCEKGLMDQAVELL 449
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 134/322 (41%), Gaps = 27/322 (8%)
Query: 115 TRPTVFTCNAIIAAMYRAKRYNEAIALFHFFFTQSNIVPNIVSYNNVINTHCDEGRVDVA 174
+ P V+ A+I + R + ++L+H S ++P+ N VI + + V
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNS-VLPD----NYVITSVLKACDLKVC 142
Query: 175 LELYRHIIATAPFGPSAVTYRHLTKGFISAGRIVEALDLLREMLNKGHGADSLVYNNLIS 234
E++ ++ FG S + + + +G +V A + EM ++ H A ++ +I+
Sbjct: 143 REIHAQVLKLG-FGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATV----MIN 197
Query: 235 GFLELGNLDKANELFDELKERCLVYDGVVNATYMEWFFNNGRDKEAMDSYKSLMDRQFKM 294
+ E G + +A ELF ++K + D V ++ N +A++ + R+ +M
Sbjct: 198 CYSECGFIKEALELFQDVK----IKDTVCWTAMIDGLVRNKEMNKALELF-----REMQM 248
Query: 295 TPVTCNVLLEVLLKHGKKTQAWALFDQMLDNHTPPNFQAVNSDTFNIMVNECFNLGKFHE 354
V+ N V + + + + +++ N ++N G +E
Sbjct: 249 ENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINE 308
Query: 355 ALATFRKAGTKSNSKAFAMDVAGYNNIISRFCENGLLSEAETLFEELCSKSLSPDVPTHR 414
A FR K DV YN +IS +G EA F ++ ++ P+ T
Sbjct: 309 ARRVFRVMRDK--------DVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLV 360
Query: 415 TLIDAYMKMERIDDALKVFHRM 436
L++A +D L+VF+ M
Sbjct: 361 ALLNACSHGGLLDIGLEVFNSM 382