Miyakogusa Predicted Gene

Lj0g3v0237689.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0237689.1 tr|B9HKI3|B9HKI3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_820184 PE=4
SV=1,37.12,3e-18,meprin and TRAF homology,MATH; MATH,MATH; TRAF
domain-like,TRAF-like; no description,TRAF-type; FAMI,gene.g18593.t1.1
         (298 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ...    92   3e-19
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ...    92   3e-19
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ...    92   3e-19
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ...    84   1e-16
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ...    84   1e-16
AT3G58260.1 | Symbols:  | TRAF-like family protein | chr3:215737...    62   7e-10
AT2G25320.1 | Symbols:  | TRAF-like family protein | chr2:107819...    61   1e-09
AT1G31390.1 | Symbols:  | TRAF-like family protein | chr1:112431...    60   2e-09
AT3G58200.1 | Symbols:  | TRAF-like family protein | chr3:215600...    60   2e-09
AT3G58210.1 | Symbols:  | TRAF-like family protein | chr3:215626...    59   5e-09
AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 | chr3:2...    59   6e-09
AT3G58250.1 | Symbols:  | TRAF-like family protein | chr3:215707...    57   1e-08
AT3G58360.1 | Symbols:  | TRAF-like family protein | chr3:215935...    57   2e-08
AT3G58340.1 | Symbols:  | TRAF-like family protein | chr3:215890...    56   3e-08
AT3G58270.2 | Symbols:  | Arabidopsis phospholipase-like protein...    55   6e-08
AT3G58270.1 | Symbols:  | Arabidopsis phospholipase-like protein...    55   6e-08
AT3G44800.1 | Symbols:  | Meprin and TRAF (MATH) homology domain...    53   2e-07
AT2G32870.1 | Symbols:  | TRAF-like family protein | chr2:139449...    53   3e-07
AT3G17380.1 | Symbols:  | TRAF-like family protein | chr3:595024...    52   4e-07
AT2G01790.1 | Symbols:  | TRAF-like family protein | chr2:341322...    52   5e-07
AT3G58410.1 | Symbols:  | TRAF-like family protein | chr3:216048...    51   9e-07
AT3G44790.1 | Symbols:  | TRAF-like family protein | chr3:163287...    50   2e-06
AT2G05420.1 | Symbols:  | TRAF-like family protein | chr2:198390...    50   2e-06
AT5G52330.1 | Symbols:  | TRAF-like superfamily protein | chr5:2...    49   3e-06
AT3G58220.2 | Symbols:  | TRAF-like family protein | chr3:215646...    49   3e-06
AT5G43560.2 | Symbols:  | TRAF-like superfamily protein | chr5:1...    49   4e-06
AT5G43560.1 | Symbols:  | TRAF-like superfamily protein | chr5:1...    49   4e-06
AT3G58220.1 | Symbols:  | TRAF-like family protein | chr3:215651...    49   5e-06

>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
           chr5:2020682-2027834 REVERSE LENGTH=985
          Length = 985

 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 25/132 (18%)

Query: 4   KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
           KFTWTI NFS+   +  +  S+ F +GG+  W+++++PKGN+ D  LS+YL   D +  P
Sbjct: 56  KFTWTIPNFSR--QNTRKHYSDVFVVGGYK-WRILIFPKGNNVDH-LSMYLDVSDAASLP 111

Query: 64  NDWSIFANFNLALINQVYSQKTI---TKVEFN------------------NASSGFIVND 102
             WS +A F+LA++NQ++++ T+   T+ +FN                  + S G++VND
Sbjct: 112 YGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVND 171

Query: 103 TCIVEVEIAVRK 114
           T +VE E+AVRK
Sbjct: 172 TVLVEAEVAVRK 183


>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
           chr5:2019545-2027834 REVERSE LENGTH=1115
          Length = 1115

 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 25/132 (18%)

Query: 4   KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
           KFTWTI NFS+   +  +  S+ F +GG+  W+++++PKGN+ D  LS+YL   D +  P
Sbjct: 55  KFTWTIPNFSR--QNTRKHYSDVFVVGGYK-WRILIFPKGNNVDH-LSMYLDVSDAASLP 110

Query: 64  NDWSIFANFNLALINQVYSQKTI---TKVEFN------------------NASSGFIVND 102
             WS +A F+LA++NQ++++ T+   T+ +FN                  + S G++VND
Sbjct: 111 YGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVND 170

Query: 103 TCIVEVEIAVRK 114
           T +VE E+AVRK
Sbjct: 171 TVLVEAEVAVRK 182


>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
           chr5:2019545-2027834 REVERSE LENGTH=1116
          Length = 1116

 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 25/132 (18%)

Query: 4   KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
           KFTWTI NFS+   +  +  S+ F +GG+  W+++++PKGN+ D  LS+YL   D +  P
Sbjct: 56  KFTWTIPNFSR--QNTRKHYSDVFVVGGYK-WRILIFPKGNNVDH-LSMYLDVSDAASLP 111

Query: 64  NDWSIFANFNLALINQVYSQKTI---TKVEFN------------------NASSGFIVND 102
             WS +A F+LA++NQ++++ T+   T+ +FN                  + S G++VND
Sbjct: 112 YGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVND 171

Query: 103 TCIVEVEIAVRK 114
           T +VE E+AVRK
Sbjct: 172 TVLVEAEVAVRK 183


>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
           chr3:3761758-3770290 REVERSE LENGTH=1115
          Length = 1115

 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 25/132 (18%)

Query: 4   KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
           KFTWTI  F++   +  +  S+ F +GG+  W+++++PKGN+ D  LS+YL   D +  P
Sbjct: 55  KFTWTIPMFTRL--NTRKHYSDVFVVGGYK-WRILIFPKGNNVDH-LSMYLDVADAANLP 110

Query: 64  NDWSIFANFNLALINQV---YSQKTITKVEFNNASS------------------GFIVND 102
             WS ++ F+LA++NQV   YS +  T+ +FN   S                  G++VND
Sbjct: 111 YGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVND 170

Query: 103 TCIVEVEIAVRK 114
           T ++E E+AVRK
Sbjct: 171 TVLIEAEVAVRK 182


>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
           chr3:3761758-3770290 REVERSE LENGTH=1114
          Length = 1114

 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 25/132 (18%)

Query: 4   KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
           KFTWTI  F++   +  +  S+ F +GG+  W+++++PKGN+ D  LS+YL   D +  P
Sbjct: 54  KFTWTIPMFTRL--NTRKHYSDVFVVGGYK-WRILIFPKGNNVDH-LSMYLDVADAANLP 109

Query: 64  NDWSIFANFNLALINQV---YSQKTITKVEFNNASS------------------GFIVND 102
             WS ++ F+LA++NQV   YS +  T+ +FN   S                  G++VND
Sbjct: 110 YGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVND 169

Query: 103 TCIVEVEIAVRK 114
           T ++E E+AVRK
Sbjct: 170 TVLIEAEVAVRK 181


>AT3G58260.1 | Symbols:  | TRAF-like family protein |
           chr3:21573754-21575114 REVERSE LENGTH=321
          Length = 321

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 127/304 (41%), Gaps = 62/304 (20%)

Query: 5   FTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSI--- 61
           FTW I N S     E  + S+ F +GG   W++I YP+ ND+D  LSL +Y G       
Sbjct: 9   FTWVIKNLSTLQGLE--VRSKIFVVGGCK-WRLIAYPEVNDADGYLSLSVYLGVPDCCES 65

Query: 62  FPNDWSIFANFNLALINQV---YSQKTITKVEFN-NAS-----------------SGFIV 100
            P+ W   A F+L ++NQ+    SQ   T+  F+ NA                   GF+V
Sbjct: 66  LPSGWKRHAKFSLTIVNQLSEGLSQVQETQAWFDENAPGWGFPPMLNLKDVSDKYGGFLV 125

Query: 101 NDTCIVEVEIAVRKHEHVNQVDPAVCSEIIEHVASDGEVVDFKSFGKIEKAFIPLLDEVC 160
           ND  +V V  AV   E V  +D    S          E +D K F K+  + +  ++ + 
Sbjct: 126 NDEVMVAV--AVDVIEVVGSLDAPEMS----------ESMDIKGF-KVLPSQVKSVNRLF 172

Query: 161 SLHPSL-----IDCQQKRSRRFTEWAFTALGQVLHFLKSRKVKDMNADACSHLQALWEKL 215
             HP +     I  Q  ++          L + LH    +   +++ D  S  +     +
Sbjct: 173 ESHPDIASKFSIKNQSLKTAYMN--VLLCLAETLH----QSPMEISEDDLSDAKTTLAYM 226

Query: 216 QTFNFELTWLQPHIRSALSMKSYIEKA---------QELKTMKENLATLEMETKSLKEKI 266
           ++  F+L WL+  +      K   E+A         +ELK +++  ++LE   K  K  +
Sbjct: 227 KSVGFKLDWLEKKLDELFEKKK--EEADKIRMQNIEEELKDLRQKCSSLEALLKKEKTGV 284

Query: 267 FTAE 270
             A+
Sbjct: 285 LAAK 288


>AT2G25320.1 | Symbols:  | TRAF-like family protein |
           chr2:10781951-10788065 REVERSE LENGTH=1673
          Length = 1673

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 31/140 (22%)

Query: 4   KFTWTINNFSKFADSEEE-----LC--SETFYIGGHPLWQVILYPKGNDSDDC-LSLYLY 55
           KFTW I NF++  D  ++     LC  S+ F IG     ++I+YP+G     C LS++L 
Sbjct: 404 KFTWRIENFTRLKDLLKKRKITGLCIKSKRFQIGNRDC-RLIVYPRGQSQPPCHLSVFLE 462

Query: 56  AGDLSIFPNDWSIFANFNLALINQVYSQKTITKVEFNNAS-------------------- 95
             D S   +DWS F +  L+++NQ   +K++TK   N  S                    
Sbjct: 463 VTD-SRSSSDWSCFVSHRLSVVNQRLEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQ 521

Query: 96  -SGFIVNDTCIVEVEIAVRK 114
            SGF+V DT +   E+ + K
Sbjct: 522 DSGFLVQDTVVFSAEVLILK 541


>AT1G31390.1 | Symbols:  | TRAF-like family protein |
          chr1:11243191-11244392 REVERSE LENGTH=268
          Length = 268

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 5/80 (6%)

Query: 3  EKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGN--DSDDCLSLYLYAGDLS 60
          +K TWTI NFS F  S+  + S+ F +G    W ++ YPKGN   ++ CLSLYL   D  
Sbjct: 7  KKITWTIKNFS-FVQSQA-IDSDIFVVGDSK-WHLVAYPKGNGESTNKCLSLYLNVADFQ 63

Query: 61 IFPNDWSIFANFNLALINQV 80
            PN W     + L ++NQ+
Sbjct: 64 SLPNGWKRHIKYRLTVVNQM 83


>AT3G58200.1 | Symbols:  | TRAF-like family protein |
          chr3:21560086-21561358 REVERSE LENGTH=319
          Length = 319

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 4  KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
          KF W I NFS      E + S+ F +G    W+++ YPKG   + C SL+L   D    P
Sbjct: 8  KFRWVIKNFSSLGS--ERVFSDIFVVGSCK-WRLMAYPKGVRDNRCFSLFLVVTDFKTLP 64

Query: 64 NDWSIFANFNLALINQVYSQKTITK 88
           DW       L ++NQ+  + +I K
Sbjct: 65 CDWKRHTRLRLNVVNQLSEELSILK 89


>AT3G58210.1 | Symbols:  | TRAF-like family protein |
           chr3:21562645-21564067 REVERSE LENGTH=330
          Length = 330

 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 25/131 (19%)

Query: 4   KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKG-NDSDDCLSLYLYAGDLSIF 62
           KFTW I NFS  +     + S  F IGG   W++++YP+G N S D LSL+L   D    
Sbjct: 8   KFTWVIQNFS--SSQSRVVPSNQFVIGGCK-WRLLVYPEGFNKSGDHLSLFLEVADPRSL 64

Query: 63  PNDWSIFANFNLALINQV-------------YSQK--------TITKVEFNNASSGFIVN 101
           P  WS  A + L ++NQ              ++QK         I   + +    GF+VN
Sbjct: 65  PPGWSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLVN 124

Query: 102 DTCIVEVEIAV 112
           D   +  E+ V
Sbjct: 125 DELKIVAEVNV 135


>AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 |
           chr3:21591618-21592836 REVERSE LENGTH=301
          Length = 301

 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 50/309 (16%)

Query: 3   EKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIF 62
           +K TWTI NF+      + + S+ F +GG   W +  YPKG ++ + LSL+L     +  
Sbjct: 7   KKITWTIKNFASLLS--DLIYSDHFVVGGCK-WHLRAYPKGYNNANSLSLFLGVAVPTSL 63

Query: 63  PNDWSIFANFNLALINQVYSQKTITKV-----------------------EFNNASSGFI 99
           P+ W     F L L+NQ+  + + +K+                       E +   SGF+
Sbjct: 64  PSGWRRHTKFRLTLVNQLSDKLSQSKLNELEQWFDEKTTNWGLSSMCPLNEIHAKDSGFL 123

Query: 100 VNDTCIVEVEIAVRKHEHVNQVDPAVCSEIIEHVASDGEVVDFKSFGKIEKAFIPLLDEV 159
           +N    + VEI V   E + ++D      + E  ++  E VD   F ++  +    +  +
Sbjct: 124 LNGELKIVVEIKVL--ETIGKLD------VTEETSTITETVDVNGF-QLLPSQAKSVSRM 174

Query: 160 CSLHPSLI-DCQQKRSRRFTEWA--FTALGQVLHFLKSRKVKDMNADACSHLQALWEKLQ 216
            + HP L  D + K     T +     +L + L  L  +  KD   DA   L +    ++
Sbjct: 175 FAKHPELASDLRPKNPNLRTGYMSLLLSLIETLSQLPQQMSKDDLLDAYDALGS----MR 230

Query: 217 TFNFELTWLQPHIRSALSMKSYIEKAQELKTMKENLATLEMETKSLKEKIFTAE--VDLE 274
              F+L WL+  +   +S K   E+A E       L  +E E K +K+K    E  V+ E
Sbjct: 231 DAGFKLDWLEKKLYE-VSEKKENEEASE-----TGLQEMEEELKDMKQKCLEMEALVEKE 284

Query: 275 IARRHLAKG 283
            A+   AK 
Sbjct: 285 KAKVSTAKA 293


>AT3G58250.1 | Symbols:  | TRAF-like family protein |
           chr3:21570745-21572143 REVERSE LENGTH=317
          Length = 317

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 123/304 (40%), Gaps = 54/304 (17%)

Query: 3   EKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDS-DDCLSLYLYAGDLSI 61
           +KF+W I NFS      E++ S+ F I G   W+++ +PKGND+  D LSLYL   +   
Sbjct: 9   KKFSWVIKNFSSL--QSEKIYSDQFVIDG-CRWRLLAFPKGNDTKSDHLSLYLDVAESES 65

Query: 62  FPNDWSIFANFNLALINQV---YSQKT------------------ITKVEFNNASSGFIV 100
            P  W   A F+  ++N +    SQ+                   +  +E     SGF+V
Sbjct: 66  LPCGWRRHAQFSFTIVNHIPEKCSQRKETIHWFCEKVSDWGFTNLVPLIELKAEDSGFLV 125

Query: 101 NDTCIVEVEIAVRKHEHVNQVDPAVCSEIIEHV-ASDGEVVDFKSFGKI--EKAFIPLLD 157
                + VEI V               E+I  +  S+ E +D   F  +  +  ++  L 
Sbjct: 126 KGELKIVVEIEVL--------------EVIGLLNVSESESMDVNGFHVLPSQAKYVKSLF 171

Query: 158 EVCSLHPSLIDCQQKRSRRFTEWAFTALGQVLHFLKSRKVKDMNADACSHLQALWEKLQT 217
           E+   HP +    + +++         L  ++  ++ R  K+++ +  +      E L  
Sbjct: 172 EI---HPDIATKFRIKNQYLKTGYMNVLLCLIETVR-RSPKEISKNDLADAYVALESLTD 227

Query: 218 FNFELTWLQPHI--------RSALSMKSYIEKAQELKTMKENLATLEMETKSLKEKIFTA 269
             F+L WL+  +        + A       E  +ELK +K   + LE +   +K K    
Sbjct: 228 HGFKLDWLKKKLDQVTQKKEKEAAGETRMHEIGEELKDLKLKCSDLEAQLDKVKWKCSDL 287

Query: 270 EVDL 273
           E  L
Sbjct: 288 EAQL 291


>AT3G58360.1 | Symbols:  | TRAF-like family protein |
           chr3:21593505-21594866 REVERSE LENGTH=298
          Length = 298

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 127/303 (41%), Gaps = 45/303 (14%)

Query: 1   MVEKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLS 60
           + +K TW I NFS      +++ S+ F +GG   W+ ++YPKGN+  D L LYL   D  
Sbjct: 5   LAKKITWAIENFSSLHS--KKIYSDPFIVGGCK-WRFLVYPKGNNV-DYLFLYLEVADYE 60

Query: 61  IFPNDWSIFANFNLALINQVYSQKTITKV---------------------EFNNASSGFI 99
               +W   A + L ++NQ   +++                         E N   SGF+
Sbjct: 61  SLSPEWRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKDSGFL 120

Query: 100 VNDTCIVEVEIAVRKHEHVNQVDPAVCSEIIEHVASDGEVVDFKSFGKIEKAFIPLLDEV 159
           VN    +  EI V   E + ++D      + E  ++  E +DF  F ++  + +  +  +
Sbjct: 121 VNGELKIVAEIEVL--EVIGKLD------VSEETSTIMESMDFNGF-QLLPSQVDFVRHM 171

Query: 160 CSLHPSLIDCQQKRSRRFTEWAFTALGQVLHFLKSRKVKDMNADACSHLQALWEKLQTFN 219
              HP +    + ++        + L  ++  L+    +    D      AL   +    
Sbjct: 172 FEKHPEIASEFRLKNPNLRAGYMSLLLSLIETLRQSPQELNKVDLAEGYVAL-RSITDAG 230

Query: 220 FELTWLQPHIRSALSMKSYIEKA---------QELKTMKENLATLEMETKSLKEKIFTAE 270
           F++ WL+  +   +S K   E+A         +EL+++K+    LE + +  K ++F A+
Sbjct: 231 FKVDWLEKKL-VEISEKKNKEEAGETRMQEINEELESLKQKCLDLEAQLEKEKAEVFAAK 289

Query: 271 VDL 273
             L
Sbjct: 290 SPL 292


>AT3G58340.1 | Symbols:  | TRAF-like family protein |
           chr3:21589071-21590401 REVERSE LENGTH=325
          Length = 325

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 25/129 (19%)

Query: 3   EKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIF 62
           +KF W I NFS       E C     + G   W+++ +PKG  +D  LSLYL   D    
Sbjct: 7   KKFCWEIKNFSSL---NSERCHSVPVVIGDCKWRLVAFPKGYKAD-YLSLYLEVADFKSL 62

Query: 63  PNDWSIFANFNLALINQVYSQKTITK---------------------VEFNNASSGFIVN 101
           P+ W  +  F   ++NQ+  + ++ +                      E N    GF+VN
Sbjct: 63  PSGWRRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFLVN 122

Query: 102 DTCIVEVEI 110
              ++  E+
Sbjct: 123 GQVMIVAEV 131


>AT3G58270.2 | Symbols:  | Arabidopsis phospholipase-like protein
           (PEARLI 4) with TRAF-like domain |
           chr3:21576033-21577655 REVERSE LENGTH=343
          Length = 343

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 27/146 (18%)

Query: 4   KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
           KFTW I NFS  +    +  S+ F++ G   W+++ +PKGN  +  LSLYL        P
Sbjct: 8   KFTWVIKNFS--SQQSRKNYSDEFFVDGCK-WRLLAFPKGNGVEK-LSLYLAVAGSEFLP 63

Query: 64  NDWSIFANFNLALINQV---YSQKTITKVEFNNASS------------------GFIVND 102
           + W   A F+ +++NQ+    SQ   TK  F+ ++S                  GF+VN 
Sbjct: 64  DGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFLVNG 123

Query: 103 TCIVEVEIAVRKHEHVNQVDPAVCSE 128
              + V+++V   E + ++D  V SE
Sbjct: 124 ELKIVVDVSVL--EVIGKLDVPVESE 147


>AT3G58270.1 | Symbols:  | Arabidopsis phospholipase-like protein
           (PEARLI 4) with TRAF-like domain |
           chr3:21576033-21577655 REVERSE LENGTH=343
          Length = 343

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 27/146 (18%)

Query: 4   KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
           KFTW I NFS  +    +  S+ F++ G   W+++ +PKGN  +  LSLYL        P
Sbjct: 8   KFTWVIKNFS--SQQSRKNYSDEFFVDGCK-WRLLAFPKGNGVEK-LSLYLAVAGSEFLP 63

Query: 64  NDWSIFANFNLALINQV---YSQKTITKVEFNNASS------------------GFIVND 102
           + W   A F+ +++NQ+    SQ   TK  F+ ++S                  GF+VN 
Sbjct: 64  DGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFLVNG 123

Query: 103 TCIVEVEIAVRKHEHVNQVDPAVCSE 128
              + V+++V   E + ++D  V SE
Sbjct: 124 ELKIVVDVSVL--EVIGKLDVPVESE 147


>AT3G44800.1 | Symbols:  | Meprin and TRAF (MATH) homology
           domain-containing protein | chr3:16343333-16346027
           FORWARD LENGTH=564
          Length = 564

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 24/131 (18%)

Query: 3   EKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIF 62
           EKFTW I NFS      E + S+ F IGG   W ++ YP G  +   LSLYL    L   
Sbjct: 4   EKFTWVIKNFSSL--QSEYIKSDIFVIGGCK-WCLLAYPNGKQNASYLSLYLDGPTLKTL 60

Query: 63  PNDWSIFANFNLALINQVYS---------------------QKTITKVEFNNASSGFIVN 101
           P        F L ++NQ+                       ++ +   + N    GF+VN
Sbjct: 61  PCGCRRRIRFRLTVVNQLSENLSRRGEGKRWFDKKLPLCGYEEVLLLTKLNAKHGGFLVN 120

Query: 102 DTCIVEVEIAV 112
           +   +  E+ V
Sbjct: 121 NEVKIVAEVDV 131


>AT2G32870.1 | Symbols:  | TRAF-like family protein |
           chr2:13944968-13946776 REVERSE LENGTH=416
          Length = 416

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 30/136 (22%)

Query: 4   KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGN--DSDDCLSLYLYAGDLSI 61
           +FTW I  FS F D EE    E F +G    W++++YPKGN     + LSLYL+A D   
Sbjct: 277 RFTWKITQFSSF-DGEEHSSYE-FTVGPR-RWKLVMYPKGNGDGKGNSLSLYLFASDYVT 333

Query: 62  FPNDWSIFANFNLALINQVYSQKTITKV-------------------------EFNNASS 96
                   A + L +++Q+      T+                          E + +S 
Sbjct: 334 NGPKGGTLAIYKLRVLDQLNRNHCETECRYWFPYNPVNQMDSLWGRPKFLPLEELHKSSR 393

Query: 97  GFIVNDTCIVEVEIAV 112
           GF+VND   + VEI++
Sbjct: 394 GFLVNDQIYIGVEISI 409


>AT3G17380.1 | Symbols:  | TRAF-like family protein |
           chr3:5950240-5952124 FORWARD LENGTH=309
          Length = 309

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 28/155 (18%)

Query: 20  EELCSETFYIGGHPLWQVILYPKGNDSD---DCLSLYLYAGDLSIFPNDWSIFANFNLAL 76
           E   +E+F  GG+  W+++LYP GN S    D +S+YL   D S     W ++A F L L
Sbjct: 38  ERYETESFEAGGYK-WKLVLYPNGNKSKNTKDHVSVYLSLADSSSLSPGWEVYAVFRLYL 96

Query: 77  INQVYSQ---------------------KTITKVEFNNASSGFIVNDTCIVEVEIAVRKH 115
           ++Q                         K I    F++AS+G+++ DTC+   ++ V K 
Sbjct: 97  LDQNKDNYLILQGNERRFHSVKREWGFDKFIPTGTFSDASNGYLMEDTCMFGADVFVSKE 156

Query: 116 EHVNQVDPAVCSEIIEHVASDGEVVDFKSFGKIEK 150
               + +   C  +I+   S   V   ++F K++K
Sbjct: 157 RRSGRGE---CLSMIKDATSSKHVWKIENFSKLDK 188


>AT2G01790.1 | Symbols:  | TRAF-like family protein |
           chr2:341322-342480 REVERSE LENGTH=269
          Length = 269

 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 118/295 (40%), Gaps = 60/295 (20%)

Query: 7   WTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSD--DCLSLYLYAGDLSIFPN 64
           W INNFS F DS+  + S+ F +GG   W ++  P+GN++   D  SLYL   D    P+
Sbjct: 11  WVINNFS-FLDSDR-VYSDIFVVGGCK-WCLLALPEGNNNYIYDYFSLYLCVPDSEYLPS 67

Query: 65  DWSIFANFNLALINQV-------------YSQKTITK--------VEFNNASSGFIVNDT 103
            W   A  +  ++NQV             + +K  T+        + F ++  GF+VN  
Sbjct: 68  GWRRRAKVSFTMVNQVTGELSQQQEGVYWFDEKNTTQGFGSMFRLLVFQSSYKGFLVNGE 127

Query: 104 CIVEVEIAVRKHEHVNQVDPAVCSEIIEHVASDGEVVDFKSFGKIEKAFIPLLDEVCSLH 163
             +  E+ V   E + ++D +  SE I+    D      +S   +   +     ++C   
Sbjct: 128 VDIVAEVDV--VEVIGKLDVSEESESIDSNGFDVLASQVESVNSLFGKYPCFASKLCPKT 185

Query: 164 PSLIDCQQKRSRRFTEWAFTALGQVLHFLKSRKVKDM-NADACSHLQALWEKLQTFNFEL 222
           P           R  +    +L ++L     +  K++ N D      AL   +    F+L
Sbjct: 186 P-----------RLKKNVVQSLNEIL----CKSTKELSNGDLAEAYSAL-RFVTKAGFKL 229

Query: 223 TWLQPHIRSALSMKSYIEKAQELKTMKENLATLEMETKSLKEKIFTAEVDLEIAR 277
            WL+  ++               +T K  L  +E + K LK K    +  LE  R
Sbjct: 230 DWLEKKLK---------------ETGKSRLQEIEEDLKDLKVKCADMDALLEFLR 269


>AT3G58410.1 | Symbols:  | TRAF-like family protein |
           chr3:21604871-21606229 REVERSE LENGTH=328
          Length = 328

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 14/115 (12%)

Query: 3   EKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIF 62
           +KF W I NFS      ++  S  F IG    W++ +YPKGN+ D  LSL+L   D    
Sbjct: 28  KKFAWVIKNFSSL--QCKKFYSVPFQIGDCK-WRLSIYPKGNNCD-YLSLFLEVADFKSL 83

Query: 63  PNDWSIFANFNLALINQ-------VYSQKTITKVEFNNASSGFIVNDTCIVEVEI 110
           P+ W  +    L ++ Q       +Y    +   + ++   GF+VN   ++  E+
Sbjct: 84  PSGWRRYVKLRLYIVKQEMWGWGFLY---MLPLTKLHDEKEGFLVNGELMIVAEV 135


>AT3G44790.1 | Symbols:  | TRAF-like family protein |
           chr3:16328792-16330265 FORWARD LENGTH=324
          Length = 324

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 28/131 (21%)

Query: 3   EKFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIF 62
           EKFTW I NFS      + + S+ F IGG   W    + KG  + + LSL+L        
Sbjct: 4   EKFTWVIKNFSSL--QSKYINSDKFVIGGCK-W----FLKGYQNANYLSLFLMVATSKTL 56

Query: 63  PNDWSIFANFNLALINQV---YSQK------------------TITKVEFNNASSGFIVN 101
           P  W  +  F L ++NQ+    SQ+                   I+  + N    GF+VN
Sbjct: 57  PCGWRRYTRFRLTVVNQLSDELSQQRETETWFDQNVVLSGNRHMISLTKLNAKKGGFLVN 116

Query: 102 DTCIVEVEIAV 112
           +   + VE+ V
Sbjct: 117 NEVKIVVEVDV 127


>AT2G05420.1 | Symbols:  | TRAF-like family protein |
           chr2:1983901-1985341 FORWARD LENGTH=297
          Length = 297

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 51/301 (16%)

Query: 6   TWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSD-------DCLSLYLYAGD 58
           TW I NFS    +   + S+ F +G    W++  YPKGN+         + L+LYL   +
Sbjct: 11  TWVIENFSSLQSAS--IHSDQFVVGDCK-WRLKAYPKGNEKATYLAYRANNLALYLNVAN 67

Query: 59  LSIFPNDWSIFANFNLALINQ---VYSQKTITKVEFNNASS-----------------GF 98
              FP  W+    F+L L+NQ     S+ T ++  F++ S+                 GF
Sbjct: 68  SKSFPIGWTRHTKFSLTLVNQKSEKLSKLTESQHWFDHKSTSRGFPAMIPLTNLHTNEGF 127

Query: 99  IVND--TCIVEVEIAVRKHEHVNQVDPAVCSEIIEHVASDGEVVDFKSFGKIEKAFIPLL 156
           +VN   T + +VE+     E V ++D +  S  +       E +D   F       +P +
Sbjct: 128 LVNGELTLVAKVEVL----EVVGKLDVSKKSSPVM------ETIDVNGF-----QVLPQI 172

Query: 157 DEVCSLHPSLIDCQQKRSRRFTEWAFTALGQVLHFLKS--RKVKDMNADACSHLQALWEK 214
           + V  L    +D   K   +        +  +L   K+  +  +D++ D  S   A    
Sbjct: 173 ESVNRLFAKHLDIASKFRPKKPYMKTAYMNVLLSLTKTLCQSPQDLSNDDISGAGAALTY 232

Query: 215 LQTFNFELTWLQPHIRSALSMKSYIEKAQELKTMKENLATLEMETKSLKEKIFTAEVDLE 274
           L+   F+L WL+   +     +   ++   LK ++E    +  E +  KEK+  A   L 
Sbjct: 233 LREAGFKLDWLE--KKHGEIKEKKKKEEASLKRLQEMEKQIFNEAQIYKEKVLAARAPLS 290

Query: 275 I 275
           +
Sbjct: 291 L 291


>AT5G52330.1 | Symbols:  | TRAF-like superfamily protein |
          chr5:21247596-21249732 REVERSE LENGTH=397
          Length = 397

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 4  KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
          K TW I  FS+   S+ E  S  F IGG+  W +++YP+G D  + LSL+L   +     
Sbjct: 20 KNTWKIKKFSQI--SKREFASSVFEIGGYS-WHILMYPEGCDVSNHLSLFLCVANHDELL 76

Query: 64 NDWSIFANFNLALINQ 79
            WS  A F ++++++
Sbjct: 77 PGWSQLAQFTISVMHK 92


>AT3G58220.2 | Symbols:  | TRAF-like family protein |
          chr3:21564677-21566435 REVERSE LENGTH=453
          Length = 453

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 5  FTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFPN 64
          F+W I +FS        + S+ F IGG   W++I YP GN     +SLY+   D    P+
Sbjct: 13 FSWVIKDFSSLG--VRAIYSDEFVIGGCK-WRLIAYPMGNRIKKYMSLYVEVADSKHLPS 69

Query: 65 DWSIFANFNLALIN 78
           WSI     + ++N
Sbjct: 70 GWSINTELRMEVVN 83


>AT5G43560.2 | Symbols:  | TRAF-like superfamily protein |
           chr5:17501043-17505526 FORWARD LENGTH=1055
          Length = 1055

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 4   KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
           K TWTI  FS    ++ EL  + F +GG+  W +++YP+G D  + LSL+L         
Sbjct: 70  KNTWTIEKFSDI--NKRELRGDVFEVGGY-KWYILIYPQGCDVCNHLSLFLCVAHHEKLL 126

Query: 64  NDWSIFANFNLALINQ 79
             WS FA F +A+ N+
Sbjct: 127 PGWSHFAQFTIAVSNK 142


>AT5G43560.1 | Symbols:  | TRAF-like superfamily protein |
           chr5:17501043-17505526 FORWARD LENGTH=1055
          Length = 1055

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 4   KFTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFP 63
           K TWTI  FS    ++ EL  + F +GG+  W +++YP+G D  + LSL+L         
Sbjct: 70  KNTWTIEKFSDI--NKRELRGDVFEVGGY-KWYILIYPQGCDVCNHLSLFLCVAHHEKLL 126

Query: 64  NDWSIFANFNLALINQ 79
             WS FA F +A+ N+
Sbjct: 127 PGWSHFAQFTIAVSNK 142


>AT3G58220.1 | Symbols:  | TRAF-like family protein |
          chr3:21565173-21566435 REVERSE LENGTH=351
          Length = 351

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 5  FTWTINNFSKFADSEEELCSETFYIGGHPLWQVILYPKGNDSDDCLSLYLYAGDLSIFPN 64
          F+W I +FS        + S+ F IGG   W++I YP GN     +SLY+   D    P+
Sbjct: 13 FSWVIKDFSSLGVRA--IYSDEFVIGGCK-WRLIAYPMGNRIKKYMSLYVEVADSKHLPS 69

Query: 65 DWSIFANFNLALIN 78
           WSI     + ++N
Sbjct: 70 GWSINTELRMEVVN 83