Miyakogusa Predicted Gene
- Lj0g3v0237289.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0237289.1 tr|D7KS33|D7KS33_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,26.02,1e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
SUBFAMI,CUFF.15540.1
(308 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 1e-46
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 1e-43
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 1e-43
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 1e-43
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 6e-42
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 167 1e-41
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 4e-41
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 7e-41
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 163 1e-40
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 162 2e-40
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 162 3e-40
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 6e-40
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 6e-40
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 8e-40
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 8e-40
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 160 1e-39
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 9e-39
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 155 2e-38
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 2e-38
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 2e-38
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 3e-38
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 3e-38
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 1e-37
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 2e-37
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 2e-37
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 4e-37
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 5e-37
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 7e-37
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 8e-37
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 9e-37
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 2e-36
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 2e-36
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 4e-36
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 5e-36
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 1e-35
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 1e-35
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 2e-35
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 3e-35
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 4e-35
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 4e-35
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 4e-35
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 4e-35
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 5e-35
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 9e-35
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 5e-34
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 9e-34
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 9e-34
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 139 3e-33
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 138 6e-33
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 1e-32
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 136 2e-32
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 3e-32
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 3e-32
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 6e-32
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 6e-32
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 9e-32
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 1e-31
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 1e-31
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 2e-31
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 2e-31
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 3e-31
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 131 5e-31
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 5e-31
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 8e-31
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 2e-30
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 2e-30
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 5e-30
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 8e-29
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 8e-29
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 8e-29
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 123 2e-28
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 122 2e-28
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 5e-28
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 6e-28
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 1e-27
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 119 2e-27
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 3e-27
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 5e-27
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 5e-27
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 6e-27
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 6e-27
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 117 8e-27
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 117 8e-27
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 9e-27
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 7e-26
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 9e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 111 5e-25
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 6e-25
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 8e-25
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 1e-24
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 109 2e-24
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 3e-24
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 3e-24
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 107 8e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 9e-24
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 8e-23
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 9e-23
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 2e-22
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 6e-22
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 7e-22
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 99 4e-21
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 8e-21
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 9e-21
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 97 1e-20
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 7e-20
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 7e-20
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 7e-20
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 9e-20
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 93 2e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 91 8e-19
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 89 4e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 7e-18
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 5e-17
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 83 3e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 83 3e-16
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 4e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 82 5e-16
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 9e-16
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 79 3e-15
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 7e-15
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 8e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 77 1e-14
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 4e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 75 6e-14
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 74 9e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 74 9e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 73 2e-13
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 73 3e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 73 3e-13
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 3e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 72 4e-13
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 72 4e-13
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 5e-13
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 72 6e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 71 9e-13
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 70 2e-12
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 70 2e-12
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 69 3e-12
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 69 5e-12
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 69 5e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 7e-12
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 67 1e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 67 2e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 67 2e-11
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 66 4e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 4e-11
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 63 2e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 62 5e-10
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 8e-10
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 8e-10
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 9e-10
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 59 3e-09
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 59 5e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 59 5e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 6e-09
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 58 7e-09
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 8e-09
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 58 9e-09
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 57 1e-08
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 57 2e-08
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 57 2e-08
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 57 2e-08
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 56 2e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 56 3e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 56 4e-08
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 4e-08
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 55 4e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 55 6e-08
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 55 6e-08
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 55 6e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 55 6e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 55 9e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 53 2e-07
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 52 4e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 52 5e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 8e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 8e-06
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 8e-06
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 9e-06
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/307 (61%), Positives = 238/307 (77%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+++KLG++ +F ME +L +MR + N++LEG YV AM++YGR GKVQEAV+VFERMD Y
Sbjct: 46 VIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFY 105
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+CEP+V SYNAIM++LV+ GYF+QAHKVYMRM+D+G+ DVY++TIR+KSFC+T RPHAA
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAA 165
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
LRLL NMS GC N VAYCTVV GFYE + ELF +ML + ++TFNKL+
Sbjct: 166 LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRV 225
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
LCKKG V E EKLL+KV+KRGV PNLFTYN+FIQGLC+ G LD AV +G + +G PD
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
V+TYN +I GLC+ S+ E+E L KMVN+GL+PD +TYNT+I GYCK GMVQ A RI+
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 301 DAVFKGF 307
DAVF GF
Sbjct: 346 DAVFNGF 352
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 149/299 (49%), Gaps = 8/299 (2%)
Query: 9 REFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
R N M + EM ++ G Y E ++ E ++F +M + +
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA--------EGYELFGKMLASGVSLCLST 218
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
+N ++ +L + G + K+ ++ +GV +++TY + I+ C+ G A+R++ +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G + + Y ++ G + A +M+ L PD T+N L+ G CK G V
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
+E+++ + G P+ FTY I GLC EG +RA+ +G+ P+V+ YNT+I
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
GL + ++E+ + ++M GL P+ T+N +++G CK G V DA+ ++K + KG+
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 130/256 (50%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K QEA +M EP ++YN ++ + G A ++ G D +TY
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYR 360
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I C G + AL L G N + Y T++ G G A +L +EM E+
Sbjct: 361 SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
L P+V TFN LV+GLCK G V +++ L+ ++ +G P++FT+NI I G + ++ A
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA 480
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ L + G+ PDV TYN+++ GLC+ S+ + E MV G P+ FT+N +++
Sbjct: 481 LEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLES 540
Query: 286 YCKKGMVQDANRILKD 301
C+ + +A +L++
Sbjct: 541 LCRYRKLDEALGLLEE 556
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 132/244 (54%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
+P V +YN ++ L + F +A +M ++G+ D YTY I +C+ G A R
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
++ + G + Y +++ G G+ + A LF+E L + + P+V +N L+ GL
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
+G + E+ +L N++ ++G+ P + T+NI + GLC+ G + A + + +G PD+
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
T+N +I G + ++ + E L M+++G+ PD +TYN++++G CK +D K
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 303 VFKG 306
V KG
Sbjct: 523 VEKG 526
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 3/240 (1%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K++ A+++ + M +P V++YN+++N L + F + Y M +KG +++T+
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I ++S CR + AL LL M + +AV + T++ GF + GD D A LF +M E
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 166 -SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ T+N ++H +K V +EKL +++ R + P+ +TY + + G C+ G ++
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
FL + G P + T VI LC + RV E+ +H+MV GL P+ NTI D
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE--AVNTICD 713
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 132/262 (50%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R + G V+E + +++ P++ +YN + L + G + A ++ + ++G
Sbjct: 223 LRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
DV TY I C+ + A L M G ++ Y T++AG+ + G LA
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ + + PD T+ L+ GLC +G + L N+ L +G+ PN+ YN I+GL
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+G + A +S +G+ P+V T+N ++ GLC+ V +++ + M++ G PD F
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 278 TYNTIIDGYCKKGMVQDANRIL 299
T+N +I GY + +++A IL
Sbjct: 463 TFNILIHGYSTQLKMENALEIL 484
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 36/299 (12%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+ A+ +F +P+V YN ++ L G +A ++ M +KG+ +V T+
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I + C+ G A L++ M G + + ++ G+ + A E+ D ML+
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ PDV T+N L++GLCK + + ++++G +PNLFT+NI ++ LCR LD
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCR------------------------------- 253
A+ L + + ++PD VT+ T+I G C+
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Query: 254 -----KSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
K V +E+ +MV+ L PD +TY ++DG+CK G V + L + + GF
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 119/246 (48%), Gaps = 3/246 (1%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY--TYTIRIKSFCRTGRPHAALR 122
++ +Y +++ L +G F +V + M++ VG+ + Y +K++ R G+ A+
Sbjct: 39 TLSTYRSVIEKLGYYGKFEAMEEVLVDMREN-VGNHMLEGVYVGAMKNYGRKGKVQEAVN 97
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
+ M + C +Y +++ + G D A +++ M +R + PDV +F + C
Sbjct: 98 VFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFC 157
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K + +LLN + +G N+ Y + G E G + G+S +
Sbjct: 158 KTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLS 217
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
T+N ++ LC+K V E E+ L K++ G+ P+ FTYN I G C++G + A R++
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 303 VFKGFK 308
+ +G K
Sbjct: 278 IEQGPK 283
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 18/298 (6%)
Query: 23 ATLENNLLEGAYVEAMRSYG-------RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNI 75
A L N + E + ++++ + G V +A + + M P + ++N +++
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH- 469
Query: 76 LVEFGYFNQ-----AHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
GY Q A ++ M D GV DVYTY + C+T + + + M
Sbjct: 470 ----GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
GC+ N + ++ + D A L +EM +S+ PD TF L+ G CK G + +
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 191 EKLLNKVLKR-GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
L K+ + VS + TYNI I + + A + + PD TY ++
Sbjct: 586 YTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVD 645
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
G C+ V + L +M+ +G P T +I+ C + V +A I+ V KG
Sbjct: 646 GFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 96/249 (38%), Gaps = 55/249 (22%)
Query: 13 QMENLLSEMRATLENNLLEGAYV--EAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYN 70
+MEN L + L+N + Y + + K ++ ++ ++ M C P++ ++N
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS-V 129
++ L + ++A + MK+K V D T+ I FC+ G A L R M
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK------ 183
+ S + Y ++ F E + +A +LF EM++R L PD T+ +V G CK
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655
Query: 184 ---------------------------------------------KGFVPESEKLLNKVL 198
KG VPE+ + V
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVD 715
Query: 199 KRGV-SPNL 206
K+ V +P L
Sbjct: 716 KKEVAAPKL 724
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 170/309 (55%), Gaps = 4/309 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLL-EGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
M+ +L +F E+L+ M+ +EN ++ E + R YGR + +++ VF +M
Sbjct: 57 MVLRLVSANKFKAAEDLIVRMK--IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKD 114
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRT-GRPH 118
++C+PS +Y ++ ILVE N A K Y M++ G+ V + + IK+ CR G
Sbjct: 115 FDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVD 174
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A L++ M GC ++ Y T+++G FG D A++LF EM+E+ P V T+ L+
Sbjct: 175 AGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
+GLC V E+ + L ++ +G+ PN+FTY+ + GLC++G +A+ + G
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR 294
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
P++VTY T+I GLC++ ++ E+ E L +M GL+PD Y +I G+C ++A
Sbjct: 295 PNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANF 354
Query: 299 LKDAVFKGF 307
L + + G
Sbjct: 355 LDEMILGGI 363
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 8/264 (3%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
RFG++ EA +F M +C P+V +Y +++N L ++A + MK KG+ +V+
Sbjct: 204 RFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVF 263
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
TY+ + C+ GR A+ L M GC N V Y T++ G + A EL D M
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI-------FIQG 215
+ L PD + K++ G C E+ L++++ G++PN T+NI ++G
Sbjct: 324 NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRG 383
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
LC RA S+ G+S +V T +++ LC+K ++ + + ++V DG P
Sbjct: 384 LCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPS 442
Query: 276 EFTYNTIIDGYCKKGMVQDANRIL 299
+ T+ +I K +V +A+ L
Sbjct: 443 KGTWKLLIGHTLDKTIVGEASDTL 466
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 145/276 (52%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y +RS GK+++A++V +RM +C P V +Y ++ A K+ M
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+D+G DV TY + + C+ GR A++ L +M GC N + + ++ G
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A +L +ML + P V TFN L++ LC+KG + + +L K+ + G PN +YN
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ G C+E +DRA+ +L + G PD+VTYNT++ LC+ +V ++ E L+++ + G
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
P TYNT+IDG K G A ++L + K K
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 149/274 (54%), Gaps = 3/274 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + Y + G++ A+ V +RM + P V +YN I+ L + G QA +V RM
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ DV TYTI I++ CR A++LL M GC+ + V Y +V G + G
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A + ++M P+V T N ++ +C G ++EKLL +L++G SP++ T+NI
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I LCR+G L RA+ L + + G P+ ++YN ++ G C++ ++ + E L +MV+ G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
PD TYNT++ CK G V+DA IL KG
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 138/263 (52%), Gaps = 3/263 (1%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R R G+++E E M + P + ++ G +A K+ ++ G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
DV TY + I +C+ G + AL +L MSV S + V Y T++ + G A E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ D ML+R PDV T+ L+ C+ V + KLL+++ RG +P++ TYN+ + G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+EG LD A+ FL + G P+V+T+N ++ +C R +++E+ L M+ G P
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 278 TYNTIIDGYCKKGMVQDANRILK 300
T+N +I+ C+KG++ A IL+
Sbjct: 346 TFNILINFLCRKGLLGRAIDILE 368
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 133/244 (54%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G++ EA+ M C+P+V ++N I+ + G + A K+ M KG V T+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I I CR G A+ +L M GC N+++Y ++ GF + D A E + M+
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R PD+ T+N ++ LCK G V ++ ++LN++ +G SP L TYN I GL + G +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+ L + + + PD +TY++++ GL R+ +V E+ + H+ G++P+ T+N+I+
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 285 GYCK 288
G CK
Sbjct: 528 GLCK 531
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 126/232 (54%), Gaps = 3/232 (1%)
Query: 76 LVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFN 135
+V G + K M G D+ T I+ FCR G+ A ++L + G +
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 136 AVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLN 195
+ Y +++G+ + G+ + A + D M S+ PDV T+N ++ LC G + ++ ++L+
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 196 KVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKS 255
++L+R P++ TY I I+ CR+ + A+ L + G +PDVVTYN ++ G+C++
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 256 RVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
R+ E+ + L+ M + G QP+ T+N I+ C G DA ++L D + KGF
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 123/230 (53%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R G + A+D+ E+M + C+P+ SYN +++ + ++A + RM +G D+
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
TY + + C+ G+ A+ +L +S GCS + Y TV+ G + G A +L DEM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ L PD T++ LV GL ++G V E+ K ++ + G+ PN T+N + GLC+
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
DRA+ FL + G P+ +Y +I GL + E+ E L+++ N GL
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
DV + N L + + G + E K L ++ G P++ I+G CR G +A L
Sbjct: 102 DVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
+ G PDV+TYN +I G C+ + + L +M + PD TYNTI+ C
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDS 217
Query: 290 GMVQDANRIL 299
G ++ A +L
Sbjct: 218 GKLKQAMEVL 227
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 162/305 (53%), Gaps = 4/305 (1%)
Query: 4 KLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCE 63
+LG +E + + LL E++ + + +Y + Y RFG++ + + E M +
Sbjct: 258 QLGRIKEAHHLL-LLMELKGYTPDVI---SYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P+ + Y +I+ +L +A + + M +G+ D YT I FC+ G AA +
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
M + + + Y +++GF + GD A +LF EM + L PD TF +L++G CK
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + ++ ++ N +++ G SPN+ TY I GLC+EG LD A L + + G+ P++ T
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
YN+++ GLC+ + E+ + + + GL D TY T++D YCK G + A ILK+ +
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 304 FKGFK 308
KG +
Sbjct: 554 GKGLQ 558
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 144/274 (52%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + + + G ++ A F M + P V +Y AI++ + G +A K++ M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
KG+ D T+T I +C+ G A R+ +M GCS N V Y T++ G + GD
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A EL EM + L P++ T+N +V+GLCK G + E+ KL+ + G++ + TY
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ C+ G +D+A L + +G+ P +VT+N ++ G C + + E+ L+ M+ G+
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
P+ T+N+++ YC + ++ A I KD +G
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 137/256 (53%), Gaps = 1/256 (0%)
Query: 44 FGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFN-QAHKVYMRMKDKGVGSDVY 102
FG ++EA VFE+M Y SV S N + L + Y A V+ + GV +V
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
+Y I I C+ GR A LL M + G + + ++Y TVV G+ FG+ D +L + M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ L P+ + ++ LC+ + E+E+ ++++++G+ P+ Y I G C+ G +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
A F + ++PDV+TY +I G C+ +VE+ + H+M GL+PD T+ +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 283 IDGYCKKGMVQDANRI 298
I+GYCK G ++DA R+
Sbjct: 428 INGYCKAGHMKDAFRV 443
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 133/267 (49%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+ E + Y + G +++A V M C P+V +Y +++ L + G + A+++ M
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
G+ +++TY + C++G A++L+ G + + V Y T++ + + G+
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A+E+ EML + L P + TFN L++G C G + + EKLLN +L +G++PN T+N
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
++ C L A + G+ PD TY ++ G C+ + E+ +M G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRIL 299
TY+ +I G+ K+ +A +
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVF 689
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 7/252 (2%)
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT---YTIRIKSFCRTGR 116
+ +P V ++ +LV+FG +A +V+ +M + G+ V + Y R+ C +
Sbjct: 171 WGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--K 226
Query: 117 PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNK 176
A+ + R G +N +Y V+ + G A L M + PDV +++
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
+V+G C+ G + + KL+ + ++G+ PN + Y I LCR L A + R+G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
+ PD V Y T+I G C++ + + + ++M + + PD TY II G+C+ G + +A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 297 RILKDAVFKGFK 308
++ + KG +
Sbjct: 407 KLFHEMFCKGLE 418
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 162/305 (53%), Gaps = 4/305 (1%)
Query: 4 KLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCE 63
+LG +E + + LL E++ + + +Y + Y RFG++ + + E M +
Sbjct: 258 QLGRIKEAHHLL-LLMELKGYTPDVI---SYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P+ + Y +I+ +L +A + + M +G+ D YT I FC+ G AA +
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
M + + + Y +++GF + GD A +LF EM + L PD TF +L++G CK
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + ++ ++ N +++ G SPN+ TY I GLC+EG LD A L + + G+ P++ T
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
YN+++ GLC+ + E+ + + + GL D TY T++D YCK G + A ILK+ +
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 304 FKGFK 308
KG +
Sbjct: 554 GKGLQ 558
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 144/274 (52%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + + + G ++ A F M + P V +Y AI++ + G +A K++ M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
KG+ D T+T I +C+ G A R+ +M GCS N V Y T++ G + GD
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A EL EM + L P++ T+N +V+GLCK G + E+ KL+ + G++ + TY
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ C+ G +D+A L + +G+ P +VT+N ++ G C + + E+ L+ M+ G+
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
P+ T+N+++ YC + ++ A I KD +G
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 137/256 (53%), Gaps = 1/256 (0%)
Query: 44 FGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFN-QAHKVYMRMKDKGVGSDVY 102
FG ++EA VFE+M Y SV S N + L + Y A V+ + GV +V
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
+Y I I C+ GR A LL M + G + + ++Y TVV G+ FG+ D +L + M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ L P+ + ++ LC+ + E+E+ ++++++G+ P+ Y I G C+ G +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
A F + ++PDV+TY +I G C+ +VE+ + H+M GL+PD T+ +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 283 IDGYCKKGMVQDANRI 298
I+GYCK G ++DA R+
Sbjct: 428 INGYCKAGHMKDAFRV 443
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 133/267 (49%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+ E + Y + G +++A V M C P+V +Y +++ L + G + A+++ M
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
G+ +++TY + C++G A++L+ G + + V Y T++ + + G+
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A+E+ EML + L P + TFN L++G C G + + EKLLN +L +G++PN T+N
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
++ C L A + G+ PD TY ++ G C+ + E+ +M G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRIL 299
TY+ +I G+ K+ +A +
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVF 689
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 7/252 (2%)
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT---YTIRIKSFCRTGR 116
+ +P V ++ +LV+FG +A +V+ +M + G+ V + Y R+ C +
Sbjct: 171 WGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--K 226
Query: 117 PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNK 176
A+ + R G +N +Y V+ + G A L M + PDV +++
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
+V+G C+ G + + KL+ + ++G+ PN + Y I LCR L A + R+G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
+ PD V Y T+I G C++ + + + ++M + + PD TY II G+C+ G + +A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 297 RILKDAVFKGFK 308
++ + KG +
Sbjct: 407 KLFHEMFCKGLE 418
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 171/343 (49%), Gaps = 38/343 (11%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLL--EGAYVEAMRSYGRFG-KVQEAVDVFERM 57
++ KLG + EF ++ LL +M+ + ++ E ++ MR Y + G Q + E
Sbjct: 117 LIGKLGANGEFKTIDRLLIQMK---DEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
++Y+CEP+ SYN ++ ILV A V+ M + + ++T+ + +K+FC
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
+AL LLR+M+ GC N+V Y T++ + + A +L +EM PD TFN +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA------------ 225
+ GLCK + E+ K++N++L RG +P+ TY + GLC+ G +D A
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353
Query: 226 --------------------VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLH 265
V V+ G+ PDV TYN++I G ++ V + E LH
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
M N G +P+ ++Y ++DG+CK G + +A +L + G K
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 145/275 (52%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y + + + GK+ EA +V M +P+ +N +++ + +A +++ M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
KG DVYT+ I C AL LLR+M G N V Y T++ F G+
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
AR+L +EM+ + D T+N L+ GLC+ G V ++ L K+L+ G +P+ + NI
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I GLCR G ++ AV F + G +PD+VT+N++I GLCR R+ + K+ +G+
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
PD T+NT++ CK G V DA +L + + GF
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 149/286 (52%), Gaps = 16/286 (5%)
Query: 4 KLGHHREFNQMENLLSEMRA------TLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERM 57
KLG + ++ N+L+EM A T+ N L A+ + R + EAV++F M
Sbjct: 436 KLG---KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR-------IPEAVEIFREM 485
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
C+P V+++N++++ L E A + M +GV ++ TY I +F R G
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
A +L+ M G + + Y +++ G G+ D AR LF++ML P + N L
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
++GLC+ G V E+ + +++ RG +P++ T+N I GLCR G ++ + + EG+
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
PD VT+NT++ LC+ V ++ L + + DG P+ T++ ++
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 138/263 (52%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + Y + G V A++V M C+P+V+SY +++ + G ++A+ V M
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
G+ + + I +FC+ R A+ + R M GC + + ++++G E +
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A L +M+ + + T+N L++ ++G + E+ KL+N+++ +G + TYN
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I+GLCR G +D+A + R+G +P ++ N +I GLCR V E+ E +MV G
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 273 QPDEFTYNTIIDGYCKKGMVQDA 295
PD T+N++I+G C+ G ++D
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDG 653
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 136/270 (50%), Gaps = 5/270 (1%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM-KDKG 96
M + G+V A D+F R+ +P + +N +++ V G + A V M G
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
+ DV TY I + + G AL +L +M GC N +Y +V GF + G D A
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
+ +EM L P+ FN L+ CK+ +PE+ ++ ++ ++G P+++T+N I GL
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
C + A+ L + EG+ + VTYNT+I R+ + E+ + +++MV G DE
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
TYN++I G C+ G V A + + + G
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 1/232 (0%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
S Y ++ L G F ++ ++MKD+G+ + ++ + + G P RL+
Sbjct: 110 SFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLM 169
Query: 125 RNM-SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
M +V+ C +Y V+ +A +F +ML R + P + TF ++ C
Sbjct: 170 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA 229
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
+ + LL + K G PN Y I L + ++ A+ L + G PD T
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+N VI GLC+ R+ E+ + +++M+ G PD+ TY +++G CK G V A
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 104/217 (47%), Gaps = 2/217 (0%)
Query: 10 EFNQMENLLSEMRATLENNLLEGA--YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVH 67
E +++++ L +R + ++ Y + ++ R G+++EA + M
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+YN+++ L G ++A ++ +M G + I I CR+G A+ + M
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
+ G + + V + +++ G G + +F ++ + PD TFN L+ LCK GFV
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
++ LL++ ++ G PN T++I +Q + + LDR
Sbjct: 686 YDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 163/309 (52%), Gaps = 3/309 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERM-DL 59
+L +LG F+ M+ +L +M+++ + ++ + SY +F E + V + M D
Sbjct: 89 ILLRLGRSGSFDDMKKILEDMKSS-RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDE 147
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+ +P H YN ++N+LV+ + +M G+ DV T+ + IK+ CR +
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A+ +L +M +G + + TV+ G+ E GD D A + ++M+E + N +VH
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 180 GLCKKGFVPESEKLLNKVLKR-GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
G CK+G V ++ + ++ + G P+ +T+N + GLC+ G + A+ + + +EG
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
PDV TYN+VI GLC+ V E+ E L +M+ P+ TYNT+I CK+ V++A +
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 299 LKDAVFKGF 307
+ KG
Sbjct: 388 ARVLTSKGI 396
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 141/265 (53%), Gaps = 1/265 (0%)
Query: 45 GKVQEAVDVFERMDLYNCE-PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT 103
G+V++A++ + M + P +++N ++N L + G+ A ++ M +G DVYT
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
Y I C+ G A+ +L M CS N V Y T+++ + + A EL +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
+ + PDV TFN L+ GLC + +L ++ +G P+ FTYN+ I LC +G LD
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
A+ L + G + V+TYNT+I G C+ ++ E+EE +M G+ + TYNT+I
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 284 DGYCKKGMVQDANRILKDAVFKGFK 308
DG CK V+DA +++ + +G K
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQK 537
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ G+V+EAV+V ++M +C P+ +YN +++ L + +A ++ + KG+ DV
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
T+ I+ C T A+ L M GC + Y ++ G D A + +M
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
V T+N L+ G CK E+E++ +++ GVS N TYN I GLC+ +
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
+ A + + EG PD TYN+++ CR + ++ + + M ++G +PD TY T+
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 283 IDGYCKKGMVQDANRILKDAVFKGF 307
I G CK G V+ A+++L+ KG
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 140/264 (53%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ G V+ A+++ + M +P V++YN++++ L + G +A +V +M + +
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
TY I + C+ + A L R ++ G + + +++ G + +A ELF+EM
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ PD T+N L+ LC KG + E+ +L ++ G + ++ TYN I G C+
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
A + G+S + VTYNT+I GLC+ RV ++ + + +M+ +G +PD++TYN++
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 283 IDGYCKKGMVQDANRILKDAVFKG 306
+ +C+ G ++ A I++ G
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNG 570
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 2/260 (0%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
A+++FE M CEP +YN +++ L G ++A + +M+ G V TY I
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
FC+ + A + M V G S N+V Y T++ G + + A +L D+M+ P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
D T+N L+ C+ G + ++ ++ + G P++ TY I GLC+ G ++ A L
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV-NDGLQPDEFTYNTIIDGYCK 288
S+ +G++ YN VI GL RK + E+ +M+ + PD +Y + G C
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Query: 289 -KGMVQDANRILKDAVFKGF 307
G +++A L + + KGF
Sbjct: 659 GGGPIREAVDFLVELLEKGF 678
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 6/266 (2%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ EA+++ ++M+L C SV +YN +++ + +A +++ M+ GV + TY
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I C++ R A +L+ M + G + Y +++ F GD A ++ M
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
PD+ T+ L+ GLCK G V + KLL + +G++ YN IQGL R+
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 225 AV-VFLGSVSREGMSPDVVTYNTVICGLCRKSRVV-ESEECLHKMVNDGLQPDEFTYNTI 282
A+ +F + + PD V+Y V GLC + E+ + L +++ G P+ + +
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Query: 283 IDGYCKKGM----VQDANRILKDAVF 304
+G M V+ N +++ A F
Sbjct: 689 AEGLLTLSMEETLVKLVNMVMQKARF 714
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 8/267 (2%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + + + K +EA ++F+ M+++ + +YN +++ L + A ++ +M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+G D YTY + FCR G A +++ M+ GC + V Y T+++G + G
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG-VSPNLFTYNI 211
++A +L + + + +N ++ GL +K E+ L ++L++ P+ +Y I
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 212 FIQGLCREGALDR-AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
+GLC G R AV FL + +G P+ + + GL S EE L K+VN
Sbjct: 652 VFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSM----EETLVKLVNM 707
Query: 271 GLQPDEFTYN--TIIDGYCKKGMVQDA 295
+Q F+ +++ G K QDA
Sbjct: 708 VMQKARFSEEEVSMVKGLLKIRKFQDA 734
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 149/264 (56%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
M + + G + +A VF+ + + +P+V S+N ++N + G ++ ++ +M+
Sbjct: 247 MNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT 306
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
DV+TY+ I + C+ + A L M G N V + T++ G G+ DL +E
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ +ML + L PD+ +N LV+G CK G + + +++ +++RG+ P+ TY I G C
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
R G ++ A+ + + G+ D V ++ ++CG+C++ RV+++E L +M+ G++PD+
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Query: 278 TYNTIIDGYCKKGMVQDANRILKD 301
TY ++D +CKKG Q ++LK+
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKE 510
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 138/284 (48%), Gaps = 3/284 (1%)
Query: 18 LSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILV 77
L EMR T L A M +Y G + +A+ F + + + +++ ++
Sbjct: 160 LVEMRVTPMCGFLVDAL---MITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMM 216
Query: 78 EFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAV 137
+ YM + D G +VY + I + FC+ G A ++ ++ V
Sbjct: 217 KLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVV 276
Query: 138 AYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKV 197
++ T++ G+ + G+ D L +M + PDV T++ L++ LCK+ + + L +++
Sbjct: 277 SFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM 336
Query: 198 LKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRV 257
KRG+ PN + I G R G +D + +G+ PD+V YNT++ G C+ +
Sbjct: 337 CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 258 VESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
V + + M+ GL+PD+ TY T+IDG+C+ G V+ A I K+
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE 440
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 35/284 (12%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV--------- 88
+ Y + G + E + +M+ P V +Y+A++N L + + AH +
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGL 341
Query: 89 --------------------------YMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
Y +M KG+ D+ Y + FC+ G AA
Sbjct: 342 IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
++ M G + + Y T++ GF GD + A E+ EM + + D F+ LV G+C
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K+G V ++E+ L ++L+ G+ P+ TY + + C++G L + +G P VV
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
TYN ++ GLC+ ++ ++ L M+N G+ PD+ TYNT+++G+
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 16/290 (5%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
++ L + + L EM R + N+++ + + + R G++ + +++M
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVI---FTTLIHGHSRNGEIDLMKESYQKML 372
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
+P + YN ++N + G A + M +G+ D TYT I FCR G
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
AL + + M G + V + +V G + G A EML + PD T+ ++
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
CKKG KLL ++ G P++ TYN+ + GLC+ G + A + L ++ G+
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 239 PDVVTYNTVICGLCRKS----RVVESEECLHKMVNDGLQPDEFTYNTIID 284
PD +TYNT++ G R + R ++ E G+ D +Y +I++
Sbjct: 553 PDDITYNTLLEGHHRHANSSKRYIQKPEI-------GIVADLASYKSIVN 595
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 35/183 (19%)
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
E+L+ +V FN L++ CK+G + +++K+ +++ KR + P + ++N I G C+ G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES-------------------- 260
LD + + PDV TY+ +I LC+++++ +
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 261 ---------------EECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
+E KM++ GLQPD YNT+++G+CK G + A I+ + +
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 306 GFK 308
G +
Sbjct: 410 GLR 412
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 136/239 (56%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ EA +++ M P +YN++++ + ++A++++ M KG D+ TY
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+I I S+C+ R +RL R +S G N + Y T+V GF + G + A+ELF EM+
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + P V T+ L+ GLC G + ++ ++ K+ K ++ + YNI I G+C +D
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
A S+S +G+ PDVVTYN +I GLC+K + E++ KM DG PD+FTYN +I
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 143/262 (54%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+V EA+ + +RM Y +P +Y ++N L + G A ++ +M+++ + + V Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+I I S C+ G AL L M + G + V Y +++ G G D ++ EM+
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R++ PDV TF+ L+ K+G + E+++L N+++ RG++P+ TYN I G C+E L
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + +G PD+VTY+ +I C+ RV + ++ + GL P+ TYNT++
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 285 GYCKKGMVQDANRILKDAVFKG 306
G+C+ G + A + ++ V +G
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRG 450
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 144/270 (53%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E Y + + G A+D+F +M+ N + SV Y+ +++ L + G F+ A ++
Sbjct: 210 EVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
M+ KG+ +DV TY+ I C G+ ++LR M + V + ++ F + G
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
A+EL++EM+ R + PD T+N L+ G CK+ + E+ ++ + ++ +G P++ TY+
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I I C+ +D + +S +G+ P+ +TYNT++ G C+ ++ ++E +MV+
Sbjct: 390 ILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
G+ P TY ++DG C G + A I +
Sbjct: 450 GVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 134/256 (52%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK + + M N P V +++A++++ V+ G +A ++Y M +G+ D TY
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I FC+ H A ++ M GC + V Y ++ + + D LF E+
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ L P+ T+N LV G C+ G + +++L +++ RGV P++ TY I + GLC G L++
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+ + + M+ + YN +I G+C S+V ++ + + G++PD TYN +I
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 285 GYCKKGMVQDANRILK 300
G CKKG + +A+ + +
Sbjct: 534 GLCKKGSLSEADMLFR 549
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 134/263 (50%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+V EAV + +RM P + + + ++N L G ++A + RM + G D TY
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ C++G AL L R M + V Y V+ + G D A LF+EM
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ + DV T++ L+ GLC G + K+L +++ R + P++ T++ I +EG L
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + G++PD +TYN++I G C+++ + E+ + MV+ G +PD TY+ +I+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 285 GYCKKGMVQDANRILKDAVFKGF 307
YCK V D R+ ++ KG
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGL 416
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 137/266 (51%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y R K+ A V R EP +++ ++N G ++A + RM + D
Sbjct: 115 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+ T + I C GR AL L+ M +G + V Y V+ + G+ LA +LF
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+M ER++ V ++ ++ LCK G ++ L N++ +G+ ++ TY+ I GLC +G
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
D L + + PDVVT++ +I ++ +++E++E ++M+ G+ PD TYN
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 354
Query: 281 TIIDGYCKKGMVQDANRILKDAVFKG 306
++IDG+CK+ + +AN++ V KG
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKG 380
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 35/276 (12%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y E +R+ KV +A+D+FE M P+ +N + + + ++ M
Sbjct: 37 SYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM 96
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G+ D+YT TI I +CR + LL SV G ++ YE
Sbjct: 97 ELNGIEHDMYTMTIMINCYCRKKK------LLFAFSVLGRAWKL---------GYE---- 137
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
PD TF+ LV+G C +G V E+ L++++++ P+L T +
Sbjct: 138 ----------------PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL 181
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I GLC +G + A+V + + G PD VTY V+ LC+ + + KM +
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 241
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ Y+ +ID CK G DA + + KG K
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 4/239 (1%)
Query: 10 EFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSY 69
E NQM +L+ + E +++ Y + SY + +V + + +F + P+ +Y
Sbjct: 368 EANQMFDLM--VSKGCEPDIV--TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
N ++ + G N A +++ M +GV V TY I + C G + AL + M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
+ Y ++ G D A LF + ++ + PDV T+N ++ GLCKKG + E
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
++ L K+ + G +P+ FTYNI I+ L +V + + G S D T VI
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ A ++F+ M PSV +Y +++ L + G N+A +++ +M+ + + Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I I C + A L ++S G + V Y ++ G + G A LF +M E
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
PD T+N L+ + S +L+ ++ G S + T + I L
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 147/269 (54%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
++S+G+ G V+E + V+ +M EP++++YN +MN LV + + A +V+ M+ +
Sbjct: 194 IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI 253
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
D+ TY IK +C+ G+ A+ LR+M G + + Y T++ Y D
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
L+ EM E+ + F+ ++ GLCK+G + E + ++++G PN+ Y + I G
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+ G+++ A+ L + EG PDVVTY+ V+ GLC+ RV E+ + H DGL +
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKG 306
Y+++IDG K G V +A R+ ++ KG
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 1/252 (0%)
Query: 51 VDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKS 110
V +++ MD + H+++ ++ L + G N+ + V+ M KG +V YT+ I
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 111 FCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPD 170
+ ++G A+RLL M G + V Y VV G + G + A + F L +
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 171 VATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLG 230
++ L+ GL K G V E+E+L ++ ++G + + + YN I + +D A+
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 231 SVSRE-GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
+ E G V TY ++ G+ ++ R E+ + M++ G+ P + + G C
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Query: 290 GMVQDANRILKD 301
G V A +IL +
Sbjct: 552 GKVARACKILDE 563
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 1/276 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ Y + G+ Q+A++ M+ E +Y ++ F +Y M
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 318
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+KG+ + +++ I C+ G+ + + NM G N Y ++ G+ + G
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ A L M++ PDV T++ +V+GLCK G V E+ + G++ N Y+
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSL 438
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM-VNDG 271
I GL + G +D A +S +G + D YN +I + +V E+ +M +G
Sbjct: 439 IDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEG 498
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+TY ++ G K+ ++A ++ + KG
Sbjct: 499 CDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGI 534
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%)
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
IKSF + G L + R M G Y ++ G D A +F+ M +
Sbjct: 194 IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI 253
Query: 168 CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVV 227
PD+ T+N ++ G CK G ++ + L + RG + TY IQ + V
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 228 FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
+ +G+ ++ VI GLC++ ++ E M+ G +P+ Y +IDGY
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 288 KKGMVQDANRILKDAVFKGFK 308
K G V+DA R+L + +GFK
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFK 394
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 2/193 (1%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+V+EA+D F + Y+++++ L + G ++A +++ M +KG D Y Y
Sbjct: 411 GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY 470
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVF-GCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
I +F + + A+ L + M GC Y +++G ++ + A +L+D M+
Sbjct: 471 NALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMI 530
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
++ + P A F L GLC G V + K+L+++ GV + ++ I LC+ G +
Sbjct: 531 DKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDM-INTLCKAGRIK 589
Query: 224 RAVVFLGSVSREG 236
A ++ G
Sbjct: 590 EACKLADGITERG 602
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%)
Query: 133 SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEK 192
+ N Y ++V D D R + E+ + V+ N L+ K G V E
Sbjct: 149 THNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLW 208
Query: 193 LLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLC 252
+ K+ + G+ P L+TYN + GL +D A + + PD+VTYNT+I G C
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYC 268
Query: 253 RKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + ++ E L M G + D+ TY T+I
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQA 301
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
N I+ + G ++ + + G+ P + TYN ++ GL V +E M +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
++PD TYNT+I GYCK G Q A L+D +G
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 148/285 (51%), Gaps = 8/285 (2%)
Query: 11 FNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYN 70
F++ME N L++G Y + K+ + + M L EP++ SYN
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDG--------YCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
++N L G + V M +G D TY IK +C+ G H AL + M
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
G + + + Y +++ + G+ + A E D+M R LCP+ T+ LV G +KG++ E+
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICG 250
++L ++ G SP++ TYN I G C G ++ A+ L + +G+SPDVV+Y+TV+ G
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 251 LCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
CR V E+ +MV G++PD TY+++I G+C++ ++A
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 148/271 (54%), Gaps = 1/271 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGY-FNQAHKVYMRMKDKG 96
++SY R + +A+ + + P V SYNA+++ + + A V+ M +
Sbjct: 141 VKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ 200
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
V +V+TY I I+ FC G AL L M GC N V Y T++ G+ + D
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
+L M + L P++ ++N +++GLC++G + E +L ++ +RG S + TYN I+G
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
C+EG +A+V + R G++P V+TY ++I +C+ + + E L +M GL P+E
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
TY T++DG+ +KG + +A R+L++ GF
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 153/291 (52%), Gaps = 15/291 (5%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + S + G + A++ ++M + P+ +Y +++ + GY N+A++V M
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
D G V TY I C TG+ A+ +L +M G S + V+Y TV++GF D
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A + EM+E+ + PD T++ L+ G C++ E+ L ++L+ G+ P+ FTY
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I C EG L++A+ + +G+ PDVVTY+ +I GL ++SR E++ L K+ +
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 273 QPDEFTYNTIID---------------GYCKKGMVQDANRILKDAVFKGFK 308
P + TY+T+I+ G+C KGM+ +A+++ + + K K
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 3/301 (0%)
Query: 9 REFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVH 67
R + EN+ EM + + N+ Y +R + G + A+ +F++M+ C P+V
Sbjct: 184 RNISFAENVFKEMLESQVSPNVF--TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 241
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+YN +++ + + K+ M KG+ ++ +Y + I CR GR +L M
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
+ G S + V Y T++ G+ + G+ A + EML L P V T+ L+H +CK G +
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
+ + L+++ RG+ PN TY + G ++G ++ A L ++ G SP VVTYN +
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
I G C ++ ++ L M GL PD +Y+T++ G+C+ V +A R+ ++ V KG
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 308 K 308
K
Sbjct: 482 K 482
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 145/292 (49%), Gaps = 15/292 (5%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E Y + + + G + EA V M+ PSV +YNA++N G A V
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
MK+KG+ DV +Y+ + FCR+ ALR+ R M G + + Y +++ GF E
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
A +L++EML L PD T+ L++ C +G + ++ +L N+++++GV P++ TY+
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI--C-------------GLCRKS 255
+ I GL ++ A L + E P VTY+T+I C G C K
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 256 RVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+ E+++ M+ +PD YN +I G+C+ G ++ A + K+ V GF
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 144/272 (52%)
Query: 28 NLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHK 87
+L E Y ++ Y + G +A+ + M + PSV +Y ++++ + + G N+A +
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 88 VYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFY 147
+M+ +G+ + TYT + F + G + A R+LR M+ G S + V Y ++ G
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 148 EFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
G + A + ++M E+ L PDV +++ ++ G C+ V E+ ++ +++++G+ P+
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
TY+ IQG C + A + R G+ PD TY +I C + + ++ + ++M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
V G+ PD TY+ +I+G K+ ++A R+L
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 108/265 (40%), Gaps = 50/265 (18%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+++A+ V E M P V SY+ +++ ++A +V M +KG+ D TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I+ FC R A L M G + Y ++ + GD + A +L +EM+E
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 165 RSLCPDVATFNKLVHGL------------------------------------------- 181
+ + PDV T++ L++GL
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 182 -------CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
C KG + E++++ +L + P+ YNI I G CR G + +A + +
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 235 EGMSPDVVTYNTVICGLCRKSRVVE 259
G VT ++ L ++ +V E
Sbjct: 669 SGFLLHTVTVIALVKALHKEGKVNE 693
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 54/263 (20%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ + + +EA D++E M P +Y A++N G +A +++ M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM--------------SVFGCS---FN 135
+KGV DV TY++ I + R A RLL + + CS F
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 136 AVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC------------- 182
+V +++ GF G A ++F+ ML ++ PD +N ++HG C
Sbjct: 607 SVV--SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 183 ----------------------KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
K+G V E ++ VL+ + ++ REG
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREG 724
Query: 221 ALDRAVVFLGSVSREGMSPDVVT 243
+D + L ++++G P+ ++
Sbjct: 725 NMDVVLDVLAEMAKDGFLPNGIS 747
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVE-SEECLHKM 267
+++ ++ R +D+A+ + G P V++YN V+ R R + +E +M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
+ + P+ FTYN +I G+C G + A + KG
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG 235
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 153/287 (53%), Gaps = 8/287 (2%)
Query: 20 EMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEF 79
E T N L++G ++E GKV EAV + +RM C+P V +YN+I+N +
Sbjct: 155 EPDTTTFNTLIKGLFLE--------GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 80 GYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAY 139
G + A + +M+++ V +DV+TY+ I S CR G AA+ L + M G + V Y
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 140 CTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
++V G + G + L +M+ R + P+V TFN L+ K+G + E+ +L +++
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 200 RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVE 259
RG+SPN+ TYN + G C + L A L + R SPD+VT+ ++I G C RV +
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 260 SEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
+ + GL + TY+ ++ G+C+ G ++ A + ++ V G
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 141/263 (53%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+QEA ++++ M P++ +YN +M+ ++A+ + M D+ T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
T IK +C R +++ RN+S G NAV Y +V GF + G LA ELF EM+
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ PDV T+ L+ GLC G + ++ ++ + K + + Y I+G+C+ G ++
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A S+ +G+ P+V+TY +I GLC+K + E+ L KM DG P++ TYNT+I
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 285 GYCKKGMVQDANRILKDAVFKGF 307
+ + G + + +++++ GF
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGF 574
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K +A+ +F+ M PS+ ++ + + FN +++ G+ ++YT
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I I FCR + A +L + G + + T++ G + G A L D M+E
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
PDV T+N +V+G+C+ G + LL K+ +R V ++FTY+ I LCR+G +D A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + +G+ VVTYN+++ GLC+ + + L MV+ + P+ T+N ++D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 286 YCKKGMVQDANRILKDAVFKGF 307
+ K+G +Q+AN + K+ + +G
Sbjct: 308 FVKEGKLQEANELYKEMITRGI 329
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 138/268 (51%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y +R + GK + + + M P+V ++N ++++ V+ G +A+++Y M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+G+ ++ TY + +C R A +L M CS + V + +++ G+
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D ++F + +R L + T++ LV G C+ G + +E+L +++ GV P++ TY I
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ GLC G L++A+ + + M +V Y T+I G+C+ +V ++ + G+
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILK 300
+P+ TY +I G CKKG + +AN +L+
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLR 532
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 16/264 (6%)
Query: 14 MENLLSEMRATLENNLLE-----------GAYVEAMRSYGRFGKVQEAVDVFERMDLYNC 62
M+N LSE NN+L+ + ++ Y +V + + VF +
Sbjct: 345 MQNRLSE-----ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
+ +Y+ ++ + G A +++ M GV DV TY I + C G+ AL
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
+ ++ V Y T++ G + G + A LF + + + P+V T+ ++ GLC
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
KKG + E+ LL K+ + G +PN TYN I+ R+G L + + + G S D
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
Query: 243 TYNTVICGLCRKSRVVESEECLHK 266
+ VI L + + CL K
Sbjct: 580 SIKMVIDMLLSAMKRLTLRYCLSK 603
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%)
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
++ T N +++ C+ + +L KV+K G P+ T+N I+GL EG + AVV +
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
+ G PDVVTYN+++ G+CR + + L KM ++ D FTY+TIID C+
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 290 GMVQDANRILKDAVFKGFK 308
G + A + K+ KG K
Sbjct: 242 GCIDAAISLFKEMETKGIK 260
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 163/303 (53%), Gaps = 5/303 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
++ L ++ ++ LLS+M R N + + ++A + + GK+ EA +F+ M
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA---FAKEGKLIEAEKLFDEMI 337
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
+ +P++ +YN+++N ++A +++ M K DV TY I FC+ +
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
+ L R+MS G N V Y T++ GF++ D D A+ +F +M+ + P++ T+N L+
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
GLCK G + ++ + + K + P+++TYNI +G+C+ G ++ S+S +G+
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
PDV+ YNT+I G C+K E+ KM DG PD TYNT+I + + G + +
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 299 LKD 301
+K+
Sbjct: 578 IKE 580
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 143/286 (50%), Gaps = 37/286 (12%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K EAV + ERM + C+P + +Y A++N L + G + A + +M+ + +DV Y+
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I S C+ AL L M G + Y ++++ +G A L +MLER
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P+V TFN L+ K+G + E+EKL +++++R + PN+ TYN I G C LD A
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 226 V-VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE---------------------- 262
+F VS++ + PDVVTYNT+I G C+ +VV+ E
Sbjct: 365 QQIFTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 263 -------------CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+MV+DG+ P+ TYNT++DG CK G ++ A
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 135/262 (51%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
++ EAV + ++M +P ++ +++ L + ++A + RM KG D+ TY
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I C+ G P AL LL M + V Y TV+ ++ D A LF EM +
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ PDV T++ L+ LC G ++ +LL+ +L+R ++PN+ T+N I +EG L A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + + P++VTYN++I G C R+ E+++ MV+ PD TYNT+I+G
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 286 YCKKGMVQDANRILKDAVFKGF 307
+CK V D + +D +G
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGL 411
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 131/256 (51%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K+ EAVD+F M PS+ ++ +++ + + F+ +M+ GV ++YTY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I I CR + AL +L M G + V +++ GF A L D+M+E
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
PD TF LVHGL + E+ L+ +++ +G P+L TY I GLC+ G D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ L + + + DVV Y+TVI LC+ V ++ +M N G++PD FTY+++I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 286 YCKKGMVQDANRILKD 301
C G DA+R+L D
Sbjct: 285 LCNYGRWSDASRLLSD 300
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 152/294 (51%), Gaps = 3/294 (1%)
Query: 16 NLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMN 74
NLL++M + +E +++ Y + S ++ V +A+++F MD P V +Y+++++
Sbjct: 226 NLLNKMEKGKIEADVV--IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 75 ILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSF 134
L +G ++ A ++ M ++ + +V T+ I +F + G+ A +L M
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 135 NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL 194
N V Y +++ GF D A+++F M+ + PDV T+N L++G CK V + +L
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 195 NKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRK 254
+ +RG+ N TY I G + D A + + +G+ P+++TYNT++ GLC+
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 255 SRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
++ ++ + ++PD +TYN + +G CK G V+D + KG K
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 146/297 (49%), Gaps = 3/297 (1%)
Query: 8 HREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSV 66
H + ++ +L EM ++ +++E + + + + + K + E+M++ ++
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVE--FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNL 100
Query: 67 HSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRN 126
++YN ++N L + A + +M G G + T + FC R A+ L+
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 127 MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF 186
M G + V + T+V G ++ A L + M+ + PD+ T+ +++GLCK+G
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
+ LLNK+ K + ++ Y+ I LC+ +D A+ + +G+ PDV TY++
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
+I LC R ++ L M+ + P+ T+N++ID + K+G + +A ++ + +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 134/263 (50%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R ++ A+ + +M PS+ + N+++N ++A + +M + G D
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
T+T + + + A+ L+ M V GC + V Y V+ G + G+ DLA L ++M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ + DV ++ ++ LCK V ++ L ++ +G+ P++FTY+ I LC G
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
A L + ++P+VVT+N++I ++ +++E+E+ +M+ + P+ TYN++
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 283 IDGYCKKGMVQDANRILKDAVFK 305
I+G+C + +A +I V K
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSK 374
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 61/120 (50%)
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E+ L +++K P++ ++ + + + D + F + G+S ++ TYN +I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
LCR+S++ + L KM+ G P T N++++G+C + +A ++ V G++
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 164/311 (52%), Gaps = 12/311 (3%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAV-DVFERM 57
++ L +++ N NL +EM + N + + + + +YGR+ + D+ ER
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER- 319
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
P+V +++A+++ V+ G +A K+Y M + + D++TY+ I FC R
Sbjct: 320 ---KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
A + M C N V Y T++ GF + + ELF EM +R L + T+N L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ GL + G ++K+ K++ GV P++ TY+I + GLC+ G L++A+V + + M
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
PD+ TYN +I G+C+ +V + + + G++P+ Y T+I G+C+KG+ ++A
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA-- 554
Query: 298 ILKDAVFKGFK 308
DA+F+ K
Sbjct: 555 ---DALFREMK 562
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 166/309 (53%), Gaps = 5/309 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
+++ L ++ ++ LLS+M R N + A ++A + + GK+ EA +++ M
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA---FVKEGKLVEAEKLYDEMI 352
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
+ +P + +Y++++N ++A ++ M K +V TY IK FC+ R
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
+ L R MS G N V Y T++ G ++ GD D+A+++F +M+ + PD+ T++ L+
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
GLCK G + ++ + + K + P+++TYNI I+G+C+ G ++ S+S +G+
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
P+V+ Y T+I G CRK E++ +M DG P+ TYNT+I + G + +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 299 LKDAVFKGF 307
+K+ GF
Sbjct: 593 IKEMRSCGF 601
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 139/280 (49%), Gaps = 8/280 (2%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
N L+ G ++ K EAV + +RM C+P + +Y ++N L + G + A
Sbjct: 189 NTLIHGLFLH--------NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
+ +M+ + +DV YT I + C + AL L M G N V Y +++
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
+G A L +M+ER + P+V TF+ L+ K+G + E+EKL ++++KR + P++
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
FTY+ I G C LD A + + P+VVTYNT+I G C+ RV E E +
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
M GL + TYNT+I G + G A +I K V G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 136/251 (54%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + A+ + ++M+ E V Y I++ L + N A ++ M +KG+ +V TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I+ C GR A RLL +M + N V + ++ F + G A +L+DEM++
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
RS+ PD+ T++ L++G C + E++ + ++ + PN+ TYN I+G C+ ++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+ +S+ G+ + VTYNT+I GL + +++ KMV+DG+ PD TY+ ++D
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 285 GYCKKGMVQDA 295
G CK G ++ A
Sbjct: 474 GLCKYGKLEKA 484
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 142/275 (51%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y + + + V +A+++F MD P+V +YN+++ L +G ++ A ++ M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
++ + +V T++ I +F + G+ A +L M + Y +++ GF D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A+ +F+ M+ + P+V T+N L+ G CK V E +L ++ +RG+ N TYN I
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
QGL + G D A + +G+ PD++TY+ ++ GLC+ ++ ++ + ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
PD +TYN +I+G CK G V+D + KG K
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 136/262 (51%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
++ EAV + ++M + +P+ ++N +++ L ++A + RM +G D++TY
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
+ C+ G AL LL+ M + V Y T++ + + + A LF EM +
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P+V T+N L+ LC G ++ +LL+ +++R ++PN+ T++ I +EG L A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + + PD+ TY+++I G C R+ E++ M++ P+ TYNT+I G
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 286 YCKKGMVQDANRILKDAVFKGF 307
+CK V++ + ++ +G
Sbjct: 405 FCKAKRVEEGMELFREMSQRGL 426
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 136/293 (46%), Gaps = 35/293 (11%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K+ +AVD+F M PS+ +N +++ + + F+ + RM++ + D+Y+Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I I FCR + AL +L M G + V +++ G+ A L D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
P+ TFN L+HGL E+ L+++++ RG P+LFTY + GLC+ G +D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 226 VVFLGSVSR-----------------------------------EGMSPDVVTYNTVICG 250
+ L + + +G+ P+VVTYN++I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 251 LCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
LC R ++ L M+ + P+ T++ +ID + K+G + +A ++ + +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 147/259 (56%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GKV +AV + +RM +P+ +Y ++N++ + G A ++ +M+++ + D Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+I I C+ G A L M + G + + Y T++ GF G D +L +M++
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + P+V TF+ L+ K+G + E+++LL ++++RG++PN TYN I G C+E L+
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+ + + +G PD++T+N +I G C+ +R+ + E +M G+ + TYNT++
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 285 GYCKKGMVQDANRILKDAV 303
G+C+ G ++ A ++ ++ V
Sbjct: 447 GFCQSGKLEVAKKLFQEMV 465
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 148/280 (52%), Gaps = 8/280 (2%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
N LL G +E +V EA+++ +RM +P++ + N ++N L G + A
Sbjct: 162 NTLLNGLCLEC--------RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
+ RM + G + TY + C++G+ A+ LLR M +AV Y ++ G
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
+ G D A LF+EM + D+ T+N L+ G C G + KLL ++KR +SPN+
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
T+++ I +EG L A L + + G++P+ +TYN++I G C+++R+ E+ + +
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
M++ G PD T+N +I+GYCK + D + ++ +G
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 141/268 (52%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E Y + + G+ A+++ +M+ N + Y+ I++ L + G + A ++
Sbjct: 228 EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 287
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
M+ KG +D+ TY I FC GR +LLR+M S N V + ++ F + G
Sbjct: 288 EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
A +L EM++R + P+ T+N L+ G CK+ + E+ ++++ ++ +G P++ T+N
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I I G C+ +D + +S G+ + VTYNT++ G C+ ++ +++ +MV+
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRI 298
++PD +Y ++DG C G ++ A I
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKALEI 495
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 137/268 (51%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
S+ + GK++EA + + M P+ +YN++++ + +A ++ M KG
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
D+ T+ I I +C+ R L L R MS+ G N V Y T+V GF + G ++A++LF
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCRE 219
EM+ R + PD+ ++ L+ GLC G + ++ ++ K+ K + ++ Y I I G+C
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTY 279
+D A S+ +G+ D YN +I LCRK + +++ KM +G PDE TY
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 280 NTIIDGYCKKGMVQDANRILKDAVFKGF 307
N +I + A ++++ GF
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGF 609
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 129/264 (48%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + A ++F M++ + + +YN ++ G ++ K+ M + + +V T+
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
++ I SF + G+ A +LL+ M G + N + Y +++ GF + + A ++ D M+
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ PD+ TFN L++G CK + + +L ++ RGV N TYN +QG C+ G L+
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + + PD+V+Y ++ GLC + ++ E K+ ++ D Y II
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 285 GYCKKGMVQDANRILKDAVFKGFK 308
G C V DA + KG K
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVK 540
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 141/304 (46%), Gaps = 36/304 (11%)
Query: 40 SYGRFG-KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVG 98
S G G K +AVD+F M P+V +N + + + + + + +M+ KG+
Sbjct: 61 SSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIA 120
Query: 99 SDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAREL 158
+YT +I I FCR + A + + G + V + T++ G A EL
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL 180
Query: 159 FDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFT---------- 208
D M+E P + T N LV+GLC G V ++ L++++++ G PN T
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 209 -------------------------YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
Y+I I GLC++G+LD A + +G D++T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT 300
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
YNT+I G C R + + L M+ + P+ T++ +ID + K+G +++A+++LK+ +
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 304 FKGF 307
+G
Sbjct: 361 QRGI 364
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 144/297 (48%), Gaps = 10/297 (3%)
Query: 11 FNQMENLLSEMRATLEN-NLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSY 69
FN+ME + +A + N L G + A G+ + + M P+V ++
Sbjct: 286 FNEME--IKGFKADIITYNTLIGGFCNA-------GRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
+ +++ V+ G +A ++ M +G+ + TY I FC+ R A++++ M
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
GC + + + ++ G+ + D ELF EM R + + T+N LV G C+ G +
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
++KL +++ R V P++ +Y I + GLC G L++A+ G + + M D+ Y +I
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
G+C S+V ++ + + G++ D YN +I C+K + A+ + + +G
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 126/244 (51%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
EP +N ++N L ++A ++ RM + G + T + C G+ A+
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
L+ M G N V Y V+ + G LA EL +M ER++ D ++ ++ GLC
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K G + + L N++ +G ++ TYN I G C G D L + + +SP+VV
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
T++ +I ++ ++ E+++ L +M+ G+ P+ TYN++IDG+CK+ +++A +++
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 303 VFKG 306
+ KG
Sbjct: 395 ISKG 398
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 120/282 (42%), Gaps = 43/282 (15%)
Query: 4 KLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYN 61
K G RE +Q LL EM R N + Y + + + +++EA+ + + M
Sbjct: 345 KEGKLREADQ---LLKEMMQRGIAPNTI---TYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAAL 121
C+P + ++N ++N + + +++ M +GV ++ TY ++ FC++G+ A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 122 RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG- 180
+L + M + V+Y ++ G + G+ + A E+F ++ + + D+ + ++HG
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 181 ----------------------------------LCKKGFVPESEKLLNKVLKRGVSPNL 206
LC+K + +++ L K+ + G +P+
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
TYNI I+ + A + + G DV T VI
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 95/217 (43%), Gaps = 4/217 (1%)
Query: 21 MRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFG 80
+R + N + Y ++ + + GK++ A +F+ M P + SY +++ L + G
Sbjct: 431 LRGVIANTV---TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 81 YFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYC 140
+A +++ +++ + D+ Y I I C + A L ++ + G +A AY
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Query: 141 TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR 200
+++ A LF +M E PD T+N L+ + +L+ ++
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607
Query: 201 GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
G ++ T + I L G LD++ + + S +R +
Sbjct: 608 GFPADVSTVKMVINML-SSGELDKSFLDMLSTTRASL 643
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 168/309 (54%), Gaps = 5/309 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
++ L ++ ++ LLS+M R N + A ++A + + GK+ EA +++ M
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA---FVKEGKLVEAEKLYDEMI 355
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
+ +P + +Y++++N ++A ++ M K +V TY+ IK FC+ R
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
+ L R MS G N V Y T++ GF++ D D A+ +F +M+ + P++ T+N L+
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
GLCK G + ++ + + + + P+++TYNI I+G+C+ G ++ ++S +G+S
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
P+V+ YNT+I G CRK E++ L KM DG P+ TYNT+I + G + + +
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 299 LKDAVFKGF 307
+K+ GF
Sbjct: 596 IKEMRSCGF 604
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 143/274 (52%), Gaps = 1/274 (0%)
Query: 31 EGAYVEAMRS-YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVY 89
G Y E +R+ KV +AVD+F M PS+ +N +++ + + F +
Sbjct: 47 SGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG 106
Query: 90 MRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF 149
+M+ G+ D+YTY+I I FCR + AL +L M G + V +++ G+
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 150 GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTY 209
A L D+M+E PD TF L+HGL E+ L++++++RG P+L TY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
+ GLC+ G +D A+ L + + + DVV YNT+I GLC+ + ++ +M N
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
G++PD FTY+++I C G DA+R+L D +
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 135/251 (53%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + A+ + ++M+ E V YN I++ L ++ + + A ++ M +KG+ DV+TY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I C GR A RLL +M + N V + ++ F + G A +L+DEM++
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
RS+ PD+ T++ L++G C + E++ + ++ + PN+ TY+ I+G C+ ++
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+ +S+ G+ + VTY T+I G + ++ +MV+ G+ P+ TYN ++D
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 285 GYCKKGMVQDA 295
G CK G + A
Sbjct: 477 GLCKNGKLAKA 487
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 130/261 (49%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K EAV + ++M C+P + +Y ++N L + G + A + +M+ + +DV Y
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I C+ AL L M G + Y ++++ +G A L +M+ER
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P+V TF+ L+ K+G + E+EKL ++++KR + P++FTY+ I G C LD A
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + P+VVTY+T+I G C+ RV E E +M GL + TY T+I G
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 286 YCKKGMVQDANRILKDAVFKG 306
+ + +A + K V G
Sbjct: 443 FFQARDCDNAQMVFKQMVSVG 463
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 135/270 (50%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ Y ++ +AV + ++M +P ++ +++ L ++A + +M +G
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
D+ TY + C+ G AL LL+ M + V Y T++ G ++ D A
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
LF EM + + PDV T++ L+ LC G ++ +LL+ +++R ++PN+ T++ I
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+EG L A + + + PD+ TY+++I G C R+ E++ M++ P+
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
TY+T+I G+CK V++ + ++ +G
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 134/265 (50%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
+ R ++ A+ V +M EP + + ++++N + A + +M + G D
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+T+T I + A+ L+ M GC + V Y TVV G + GD DLA L
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+M + + DV +N ++ GLCK + ++ L ++ +G+ P++FTY+ I LC G
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
A L + ++P+VVT++ +I ++ ++VE+E+ +M+ + PD FTY+
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 281 TIIDGYCKKGMVQDANRILKDAVFK 305
++I+G+C + +A + + + K
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISK 392
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%)
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
V ++ L ++K P++ +N + + + + + + G+S D+ TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
I CR+S++ + L KM+ G +PD T +++++GYC + DA ++ V G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 307 FK 308
+K
Sbjct: 184 YK 185
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 145/263 (55%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ EA +++ M + +PS+ +Y++++N ++A +++ M K DV TY
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
IK FC+ R + + R MS G N V Y ++ G ++ GD D+A+E+F EM+
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ P++ T+N L+ GLCK G + ++ + + + + P ++TYNI I+G+C+ G ++
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
++S +G+ PDVV YNT+I G CRK E++ +M DG P+ YNT+I
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 285 GYCKKGMVQDANRILKDAVFKGF 307
+ G + + ++K+ GF
Sbjct: 580 ARLRDGDREASAELIKEMRSCGF 602
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 159/311 (51%), Gaps = 12/311 (3%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAV-DVFERM 57
++ L ++ + NL EM + N + + + + +YGR+ + D+ ER
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER- 320
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
P V +++A+++ V+ G +A K+Y M + + + TY+ I FC R
Sbjct: 321 ---KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
A ++ M C + V Y T++ GF ++ + E+F EM +R L + T+N L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ GL + G ++++ +++ GV PN+ TYN + GLC+ G L++A+V + R M
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
P + TYN +I G+C+ +V + + + G++PD YNT+I G+C+KG ++A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA-- 555
Query: 298 ILKDAVFKGFK 308
DA+FK K
Sbjct: 556 ---DALFKEMK 563
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 160/294 (54%), Gaps = 3/294 (1%)
Query: 16 NLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMN 74
NLL++M + LE +L Y + ++ + +A+++F+ M+ P+V +Y+++++
Sbjct: 242 NLLNKMEQGKLEPGVL--IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 75 ILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSF 134
L +G ++ A ++ M ++ + DV+T++ I +F + G+ A +L M
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 135 NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL 194
+ V Y +++ GF D A+++F+ M+ + PDV T+N L+ G CK V E ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 195 NKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRK 254
++ +RG+ N TYNI IQGL + G D A + +G+ P+++TYNT++ GLC+
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 255 SRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
++ ++ + ++P +TYN +I+G CK G V+D + + KG K
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 135/280 (48%), Gaps = 8/280 (2%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
N L+ G ++ K EA+ + +RM C+P + +Y ++N L + G + A
Sbjct: 190 NTLIHGLFLH--------NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
+ +M+ + V Y I C+ AL L + M G N V Y ++++
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
+G A L +M+ER + PDV TF+ L+ K+G + E+EKL ++++KR + P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
TY+ I G C LD A + + PDVVTYNT+I G C+ RV E E +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
M GL + TYN +I G + G A I K+ V G
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 132/258 (51%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K+ +AV +F M PS+ ++ +++ + + F+ + +M++ G+ + YTY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I I FCR + AL +L M G N V +++ G+ A L D+M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
P+ TFN L+HGL E+ L+++++ +G P+L TY + + GLC+ G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
L + + + P V+ YNT+I GLC+ + ++ +M G++P+ TY+++I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 286 YCKKGMVQDANRILKDAV 303
C G DA+R+L D +
Sbjct: 301 LCNYGRWSDASRLLSDMI 318
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 138/270 (51%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ Y ++ EAV + ++M + +P+ ++N +++ L ++A + RM KG
Sbjct: 158 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC 217
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
D+ TY + + C+ G A LL M + Y T++ G ++ D A
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
LF EM + + P+V T++ L+ LC G ++ +LL+ +++R ++P++FT++ I
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+EG L A + + + P +VTY+++I G C R+ E+++ MV+ PD
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
TYNT+I G+CK V++ + ++ +G
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 129/263 (49%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R ++ A+ V +M EP++ + ++++N ++A + +M G +
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
T+ I + A+ L+ M GC + V Y VV G + GD DLA L ++M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ L P V +N ++ GLCK + ++ L ++ +G+ PN+ TY+ I LC G
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
A L + ++PDV T++ +I ++ ++VE+E+ +MV + P TY+++
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 283 IDGYCKKGMVQDANRILKDAVFK 305
I+G+C + +A ++ + V K
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSK 390
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 148/292 (50%), Gaps = 23/292 (7%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
++ + + G +++A +FE + + S+ SYN + LV G F +A V +M DKG+
Sbjct: 298 LKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI 357
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
G +Y+Y I + C+ G A ++ M G +AV Y ++ G+ G D A+
Sbjct: 358 GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
L EM+ + P+ T N L+H L K G + E+E+LL K+ ++G + T NI + GLC
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 218 REGALDRAVVFLGSVSREGMS-----------------------PDVVTYNTVICGLCRK 254
G LD+A+ + + G + PD++TY+T++ GLC+
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 255 SRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
R E++ +M+ + LQPD YN I +CK+G + A R+LKD KG
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 53 VFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFC 112
+++ M L P +++N ++ L + + A +++ M +KG + +T+ I ++ +C
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 113 RTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVA 172
+ G L LL M FG N V Y T+V+ F G D + ++ ++M E L PD+
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 173 TFNKLVHGLCKKGFVPESEKLLNKV-------LKRGVSPNLFTYNIFIQGLCREGALDRA 225
TFN + LCK+G V ++ ++ + + L R PN TYN+ ++G C+ G L+ A
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR---PNSITYNLMLKGFCKVGLLEDA 310
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
S+ + +YN + GL R + +E+E L +M + G+ P ++YN ++DG
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 286 YCKKGMVQDANRIL 299
CK GM+ DA I+
Sbjct: 371 LCKLGMLSDAKTIV 384
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 144/274 (52%), Gaps = 4/274 (1%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R Y + G + +++ M+ + P+ YN I++ G + + K+ +M+++G+
Sbjct: 189 VRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL 248
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV---FGCS-FNAVAYCTVVAGFYEFGDRD 153
D+ T+ RI + C+ G+ A R+ +M + G N++ Y ++ GF + G +
Sbjct: 249 VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE 308
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A+ LF+ + E + ++N + GL + G E+E +L ++ +G+ P++++YNI +
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
GLC+ G L A +G + R G+ PD VTY ++ G C +V ++ L +M+ +
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL 428
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
P+ +T N ++ K G + +A +L+ KG+
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 135/268 (50%), Gaps = 12/268 (4%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ Y GKV A + + M NC P+ ++ N +++ L + G ++A ++ +M +KG
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
G D T I + C +G A+ +++ M V G A G+ +
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS-----------AALGNLGNSYIGL- 510
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ D ++E + PD+ T++ L++GLCK G E++ L +++ + P+ YNIFI C
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
++G + A L + ++G + TYN++I GL K+++ E + +M G+ P+
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFK 305
TYNT I C+ V+DA +L + + K
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 4/204 (1%)
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
VY Y + ++S + R L ++M + G + + ++ + D ARELFD
Sbjct: 112 VYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFD 171
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
EM E+ P+ TF LV G CK G + +LLN + GV PN YN + CREG
Sbjct: 172 EMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREG 231
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND---GL-QPDE 276
D + + + EG+ PD+VT+N+ I LC++ +V+++ M D GL +P+
Sbjct: 232 RNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291
Query: 277 FTYNTIIDGYCKKGMVQDANRILK 300
TYN ++ G+CK G+++DA + +
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFE 315
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 135/255 (52%), Gaps = 17/255 (6%)
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
NC P + +Y+ ++N L + G F +A ++ M + + D Y I I FC+ G+ +A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE---LFDEMLERSLCPDVATFNKL 177
R+L++M GC + Y +++ G G ++ E L DEM E+ + P++ T+N
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGL---GIKNQIFEIHGLMDEMKEKGISPNICTYNTA 635
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV-VFLGSVS--- 233
+ LC+ V ++ LL++++++ ++PN+F++ I+ C+ D A VF +VS
Sbjct: 636 IQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICG 695
Query: 234 -REGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
+EG+ Y+ + L +++++ E L +++ G + F Y +++ CKK +
Sbjct: 696 QKEGL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDEL 749
Query: 293 QDANRILKDAVFKGF 307
+ A+ IL + +G+
Sbjct: 750 EVASGILHKMIDRGY 764
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 84/144 (58%)
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
L+ +M+ + P TFN L+ LC V + +L +++ ++G PN FT+ I ++G C
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+ G D+ + L ++ G+ P+ V YNT++ CR+ R +SE+ + KM +GL PD
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 278 TYNTIIDGYCKKGMVQDANRILKD 301
T+N+ I CK+G V DA+RI D
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSD 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 12/273 (4%)
Query: 1 MLQKLGHHREFNQMENLLSEMRA-TLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
+L L F + +NL +EM L+ + + AY + + + GK+ A V + M+
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV--AYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQA---HKVYMRMKDKGVGSDVYTYTIRIKSFCRTGR 116
C S+ +YN++ ++ G NQ H + MK+KG+ ++ TY I+ C +
Sbjct: 588 KGCHKSLETYNSL---ILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644
Query: 117 PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC-PDVATFN 175
A LL M + N ++ ++ F + D D+A+E+F+ + S+C ++
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAV--SICGQKEGLYS 702
Query: 176 KLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE 235
+ + L G + ++ +LL VL RG F Y ++ LC++ L+ A L +
Sbjct: 703 LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDR 762
Query: 236 GMSPDVVTYNTVICGLCRKSRVVESEECLHKMV 268
G D VI GL + E+ KM+
Sbjct: 763 GYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 67/132 (50%)
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
P V +N L+ K+ V L ++ G++P +T+N+ I+ LC +D A
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
+ +G P+ T+ ++ G C+ + E L+ M + G+ P++ YNTI+ +C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 289 KGMVQDANRILK 300
+G D+ ++++
Sbjct: 230 EGRNDDSEKMVE 241
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 142/253 (56%)
Query: 49 EAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRI 108
EA+ + +++ EP+V YN I++ L E G N A V MK G+ DV TY I
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 109 KSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC 168
+G + R+L +M G S + + + ++ + + G A++ ++EM++RS+
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
P++ T+N L++GLC G + E++K+LN ++ +G PN TYN I G C+ +D +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
L +SR+G+ D TYNT+ G C+ + +E+ L +MV+ G+ PD +T+N ++DG C
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 289 KGMVQDANRILKD 301
G + A L+D
Sbjct: 407 HGKIGKALVRLED 419
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 139/267 (52%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
++ + + R ++ A+ +M EPS+ ++ +++N F +A + ++
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
G +V Y I S C G+ + AL +L++M G + V Y +++ + G
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
++ + +M+ + PDV TF+ L+ K+G + E++K N++++R V+PN+ TYN
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I GLC G LD A L + +G P+ VTYNT+I G C+ RV + + L M DG+
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRIL 299
D FTYNT+ GYC+ G A ++L
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVL 382
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 152/303 (50%), Gaps = 3/303 (0%)
Query: 8 HREFNQMENLLSEMRATLENNLL---EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
HR + NL++ + + N+ Y E +RS K +A+ +F M + P
Sbjct: 18 HRHLLEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLP 77
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
S+ ++ ++ + + + ++ ++ G+ D+Y++T I FCR R AL L
Sbjct: 78 SIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCL 137
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
M G + V + ++V GF A L D+++ P+V +N ++ LC+K
Sbjct: 138 GKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEK 197
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
G V + +L + K G+ P++ TYN I L G + L + R G+SPDV+T+
Sbjct: 198 GQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITF 257
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVF 304
+ +I ++ +++E+++ ++M+ + P+ TYN++I+G C G++ +A ++L V
Sbjct: 258 SALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317
Query: 305 KGF 307
KGF
Sbjct: 318 KGF 320
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 143/295 (48%), Gaps = 5/295 (1%)
Query: 7 HHREFNQMENLLSEMRATLENNLLEGA--YVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
H +FN L +M E++ L + + + + K + + +F +++
Sbjct: 56 HSIKFNDALTLFCDMA---ESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISH 112
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
++S+ +++ + A +M G + T+ + FC R + A+ L+
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
+ G N V Y T++ E G + A ++ M + + PDV T+N L+ L
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
G S ++L+ +++ G+SP++ T++ I +EG L A + + ++P++VTY
Sbjct: 233 GTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTY 292
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
N++I GLC + E+++ L+ +V+ G P+ TYNT+I+GYCK V D +IL
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 139/276 (50%), Gaps = 4/276 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
++ +L H + +LS+M R + +++ + + YG+ G++ EA + M
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVI--TFSALIDVYGKEGQLLEAKKQYNEMIQ 282
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+ P++ +YN+++N L G ++A KV + KG + TY I +C+ R
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
+++L MS G + Y T+ G+ + G A ++ M+ + PD+ TFN L+
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
GLC G + ++ L + K + TYNI I+GLC+ ++ A S++ +G+SP
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSP 462
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVN-DGLQP 274
DV+TY T++ GL RK E+ E KM DGL P
Sbjct: 463 DVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 135/291 (46%), Gaps = 35/291 (12%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+V A+DV + M P V +YN+++ L G + + ++ M G+ DV T+
Sbjct: 198 GQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITF 257
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I + + G+ A + M + N V Y +++ G G D A+++ + ++
Sbjct: 258 SALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVS 317
Query: 165 RSLCPDVATFNKLVHGLCKK-----------------------------------GFVPE 189
+ P+ T+N L++G CK G
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSA 377
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
+EK+L +++ GV P+++T+NI + GLC G + +A+V L + + ++TYN +I
Sbjct: 378 AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIK 437
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
GLC+ +V ++ + G+ PD TY T++ G +K + ++A+ + +
Sbjct: 438 GLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYR 488
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 164/314 (52%), Gaps = 8/314 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENN-LLEGAYVEAMRSYGRFGKVQEAVDVFERM-D 58
M++ + +F+ +E LLS +R LEN ++E +++ R+YG+ +AVD+F RM D
Sbjct: 83 MIESYANSGDFDSVEKLLSRIR--LENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDV----YTYTIRIKSFCRT 114
+ C+ SV S+N+++N+++ G +++ + Y + + + ++ ++ + IK+ C+
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 115 GRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATF 174
A+ + R M C + YCT++ G + D A L DEM P +
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260
Query: 175 NKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
N L+ GLCKKG + KL++ + +G PN TYN I GLC +G LD+AV L +
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 235 EGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
P+ VTY T+I GL ++ R ++ L M G ++ Y+ +I G K+G ++
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 295 ANRILKDAVFKGFK 308
A + + KG K
Sbjct: 381 AMSLWRKMAEKGCK 394
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 134/265 (50%), Gaps = 3/265 (1%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ +AV + ERM C P+ +Y ++N LV+ A ++ M+++G + + Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
++ I + G+ A+ L R M+ GC N V Y +V G G + A+E+ + M+
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
P+ T++ L+ G K G E+ ++ ++ K G S N F Y++ I GLC G +
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV---NDGLQPDEFTYNT 281
A++ + G+ PD V Y+++I GLC + + + H+M+ QPD TYN
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 282 IIDGYCKKGMVQDANRILKDAVFKG 306
++DG C + + A +L + +G
Sbjct: 546 LLDGLCMQKDISRAVDLLNSMLDRG 570
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 7/301 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEMRA--TLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
++ L ++ LL EM++ + ++ ++ + G +V + VD M
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVD---NMF 284
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM-KDKGVGSDVYTYTIRIKSFCRTGRP 117
L C P+ +YN +++ L G ++A + RM K + +DV TY I + R
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDV-TYGTLINGLVKQRRA 343
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
A+RLL +M G N Y +++G ++ G + A L+ +M E+ P++ ++ L
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
V GLC++G E++++LN+++ G PN +TY+ ++G + G + AV + + G
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
S + Y+ +I GLC RV E+ KM+ G++PD Y++II G C G + A +
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Query: 298 I 298
+
Sbjct: 524 L 524
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 147/293 (50%), Gaps = 8/293 (2%)
Query: 10 EFNQMENLLSEMRAT--LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVH 67
+ ++ +LL M ++ + N++ G + + R +AV + M+ + H
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR---ATDAVRLLSSMEERGYHLNQH 363
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
Y+ +++ L + G +A ++ +M +KG ++ Y++ + CR G+P+ A +L M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
GC NA Y +++ GF++ G + A +++ EM + + ++ L+ GLC G V
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV---SREGMSPDVVTY 244
E+ + +K+L G+ P+ Y+ I+GLC G++D A+ + PDVVTY
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
N ++ GLC + + + + L+ M++ G PD T NT ++ +K D R
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGR 596
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 125/276 (45%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y M + ++ EAV + + M C PS YN +++ L + G + K+ M
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
KG + TY I C G+ A+ LL M C N V Y T++ G +
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A L M ER + ++ L+ GL K+G E+ L K+ ++G PN+ Y++
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ GLCREG + A L + G P+ TY++++ G + E+ + +M G
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
++F Y+ +IDG C G V++A + + G K
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 19/257 (7%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R GK EA ++ RM C P+ ++Y+++M + G +A +V+ M G + +
Sbjct: 409 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
Y++ I C GR A+ + M G + VAY +++ G G D A +L+ EM
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Query: 163 L---ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC-R 218
L E PDV T+N L+ GLC + + + LLN +L RG P++ T N F+ L +
Sbjct: 529 LCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEK 588
Query: 219 EGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFT 278
+ D+ FL ++ L ++ RV + + M+ L P T
Sbjct: 589 SNSCDKGRSFL---------------EELVVRLLKRQRVSGACTIVEVMLGKYLAPKTST 633
Query: 279 YNTIIDGYCKKGMVQDA 295
+ I+ CK + A
Sbjct: 634 WAMIVREICKPKKINAA 650
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 158/311 (50%), Gaps = 12/311 (3%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAV-DVFERM 57
++ L +R + NL +EM + N + + + + +Y R+ + D+ ER
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER- 324
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
P+V ++NA+++ V+ G +A K+Y M + + D++TY+ I FC R
Sbjct: 325 ---KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
A + M C N V Y T++ GF + D ELF EM +R L + T+ L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+HG + ++ + +++ GV PN+ TYN + GLC+ G L++A+V + R M
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
P + TYN +I G+C+ +V + + + G++PD YNT+I G+C+KG+ ++A
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA-- 559
Query: 298 ILKDAVFKGFK 308
DA+F+ +
Sbjct: 560 ---DALFRKMR 567
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 148/280 (52%), Gaps = 5/280 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
++ L ++ ++ LLS+M R N + A ++A + + GK+ EA +++ M
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA---FVKEGKLVEAEKLYDEMI 357
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
+ +P + +Y++++N ++A ++ M K +V TY I FC+ R
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
+ L R MS G N V Y T++ GF++ D D A+ +F +M+ + P++ T+N L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
GLCK G + ++ + + + + P ++TYNI I+G+C+ G ++ S+S +G+
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFT 278
PDV+ YNT+I G CRK E++ KM DG PD T
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 35/285 (12%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K EAV + +RM C+P++ +Y ++N L + G + A + +M+ + ++V Y+
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I S C+ AL L M G N + Y ++++ + A L +M+ER
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P+V TFN L+ K+G + E+EKL ++++KR + P++FTY+ I G C LD A
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE----------------------- 262
+ + P+VVTYNT+I G C+ R+ E E
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 263 ------------CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+MV+DG+ P+ TYNT++DG CK G ++ A
Sbjct: 445 FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 137/273 (50%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
G Y E +R+ K+ +A+ +F M PS+ +N +++ + + F+ +
Sbjct: 50 SGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
+M+ G+ ++YTY I I FCR + AL LL M G + V +++ G+
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
A L D+M+E PD TF L+HGL E+ L++++++RG PNL TY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
+ + GLC+ G +D A L + + +VV Y+TVI LC+ ++ +M N
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
G++P+ TY+++I C DA+R+L D +
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 151/294 (51%), Gaps = 3/294 (1%)
Query: 16 NLLSEMRAT-LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMN 74
NLL++M A +E N++ Y + S ++ +A+++F M+ P+V +Y+++++
Sbjct: 246 NLLNKMEAAKIEANVV--IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 75 ILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSF 134
L + ++ A ++ M ++ + +V T+ I +F + G+ A +L M
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 135 NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL 194
+ Y +++ GF D A+ +F+ M+ + P+V T+N L++G CK + E +L
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 195 NKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRK 254
++ +RG+ N TY I G + D A + + +G+ P+++TYNT++ GLC+
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 255 SRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
++ ++ + ++P +TYN +I+G CK G V+D + KG K
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 129/262 (49%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
++ +AV + ++M P ++ +++ L ++A + RM +G ++ TY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
+ + C+ G A LL M N V Y TV+ ++ D A LF EM +
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P+V T++ L+ LC ++ +LL+ +++R ++PN+ T+N I +EG L A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + + PD+ TY+++I G C R+ E++ M++ P+ TYNT+I+G
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 286 YCKKGMVQDANRILKDAVFKGF 307
+CK + + + ++ +G
Sbjct: 410 FCKAKRIDEGVELFREMSQRGL 431
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 59/116 (50%)
Query: 193 LLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLC 252
L ++K P++F +N + + + D + + R G+S ++ TYN +I C
Sbjct: 72 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131
Query: 253 RKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
R+S++ + L KM+ G +P T +++++GYC + DA ++ V G++
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 142/259 (54%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK EA+ + ++M Y C+P+ +Y ++N++ + G A ++ +M+++ + D Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+I I C+ G A L M + G + N + Y ++ GF G D +L +M++
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + P+V TF+ L+ K+G + E+E+L +++ RG++P+ TY I G C+E LD+
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + + +G P++ T+N +I G C+ +R+ + E KM G+ D TYNT+I
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 285 GYCKKGMVQDANRILKDAV 303
G+C+ G + A + ++ V
Sbjct: 447 GFCELGKLNVAKELFQEMV 465
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 144/268 (53%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
S+ + GK++EA ++ + M P +Y ++++ + + ++A+++ M KG
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
++ T+ I I +C+ R L L R MS+ G + V Y T++ GF E G ++A+ELF
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCRE 219
EM+ R + P++ T+ L+ GLC G ++ ++ K+ K + ++ YNI I G+C
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTY 279
+D A S+ +G+ P V TYN +I GLC+K + E+E KM DG PD +TY
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 280 NTIIDGYCKKGMVQDANRILKDAVFKGF 307
N +I + G + +++++ GF
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKRCGF 609
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 136/258 (52%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ G+ A+++ +M+ N + Y+ I++ L + G + A ++ M+ KG+ +++
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
TY I I FC GR +LLR+M + N V + ++ F + G A EL EM
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ R + PD T+ L+ G CK+ + ++ ++++ ++ +G PN+ T+NI I G C+ +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
D + +S G+ D VTYNT+I G C ++ ++E +MV+ + P+ TY +
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 283 IDGYCKKGMVQDANRILK 300
+DG C G + A I +
Sbjct: 480 LDGLCDNGESEKALEIFE 497
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 135/244 (55%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
EP+ +++ ++N L G ++A ++ RM + G D+ T + C +G+ A+
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
L+ M +GC NAV Y V+ + G LA EL +M ER++ D ++ ++ GLC
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K G + + L N++ +G++ N+ TYNI I G C G D L + + ++P+VV
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
T++ +I ++ ++ E+EE +M++ G+ PD TY ++IDG+CK+ + AN+++
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 303 VFKG 306
V KG
Sbjct: 395 VSKG 398
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 138/262 (52%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+V EA+++ +RM +P + + N ++N L G +A + +M + G + TY
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ C++G+ A+ LLR M +AV Y ++ G + G D A LF+EM
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ + ++ T+N L+ G C G + KLL ++KR ++PN+ T+++ I +EG L
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + G++PD +TY ++I G C+++ + ++ + + MV+ G P+ T+N +I+
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 285 GYCKKGMVQDANRILKDAVFKG 306
GYCK + D + + +G
Sbjct: 412 GYCKANRIDDGLELFRKMSLRG 433
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 146/306 (47%), Gaps = 13/306 (4%)
Query: 1 MLQKLGHHREFNQMENLLSEMRA------TLENNLLEGAYVEAMRSYGRFGKVQEAVDVF 54
++ L H + NL +EM + N+L G + A G+ + +
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA-------GRWDDGAKLL 321
Query: 55 ERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRT 114
M P+V +++ +++ V+ G +A +++ M +G+ D TYT I FC+
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 115 GRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATF 174
A +++ M GC N + ++ G+ + D ELF +M R + D T+
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 175 NKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
N L+ G C+ G + +++L +++ R V PN+ TY I + GLC G ++A+ + +
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 235 EGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
M D+ YN +I G+C S+V ++ + + G++P TYN +I G CKKG + +
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 295 ANRILK 300
A + +
Sbjct: 562 AELLFR 567
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 144/310 (46%), Gaps = 35/310 (11%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y E +RS K +A+D+F M P+V ++ + + + + ++ + +M
Sbjct: 55 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ KG+ ++YT +I I FCR + A + + G N + + T++ G G
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTY--- 209
A EL D M+E PD+ T N LV+GLC G E+ L++K+++ G PN TY
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 210 --------------------------------NIFIQGLCREGALDRAVVFLGSVSREGM 237
+I I GLC+ G+LD A + +G+
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
+ +++TYN +I G C R + + L M+ + P+ T++ +ID + K+G +++A
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 298 ILKDAVFKGF 307
+ K+ + +G
Sbjct: 355 LHKEMIHRGI 364
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 127/266 (47%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ G + A ++F M++ ++ +YN ++ G ++ K+ M + + +V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
T+++ I SF + G+ A L + M G + + + Y +++ GF + D A ++ D M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ + P++ TFN L++G CK + + +L K+ RGV + TYN IQG C G L
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
+ A + + P++VTY ++ GLC ++ E K+ ++ D YN I
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 283 IDGYCKKGMVQDANRILKDAVFKGFK 308
I G C V DA + KG K
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVK 540
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ Y + ++ + +++F +M L +YN ++ E G N A +++ M + V
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
++ TY I + C G AL + + + Y ++ G D A +
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
LF + + + P V T+N ++ GLCKKG + E+E L K+ + G +P+ +TYNI I+
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
+G ++V + + R G S D T VI
Sbjct: 590 GDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 1/193 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ + GK+ A ++F+ M P++ +Y +++ L + G +A +++ ++
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ + D+ Y I I C + A L ++ + G Y ++ G + G
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A LF +M E PD T+N L+ G +S KL+ ++ + G S + T +
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 213 IQGLCREGALDRA 225
I L +G L ++
Sbjct: 620 IDML-SDGRLKKS 631
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 155/281 (55%), Gaps = 3/281 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
++ L + ++ LLS+M + + N++ Y + ++ + GKV EA ++FE M
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVI--TYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+ +P + +Y++++N L ++A++++ M KG +DV +Y I FC+ R
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
++L R MS G N V Y T++ GF++ GD D A+E F +M + PD+ T+N L+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
GLC G + ++ + + KR + ++ TY I+G+C+ G ++ A S+S +G+ P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
D+VTY T++ GLC K + E E KM +GL ++ T +
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 141/261 (54%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
+ R +V +AV + ++M +P + +YNAI++ L + N A + ++ KG+ +
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
V TYT + C + R A RLL +M + N + Y ++ F + G A+ELF+
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
EM+ S+ PD+ T++ L++GLC + E+ ++ + ++ +G ++ +YN I G C+
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
++ + +S+ G+ + VTYNT+I G + V +++E +M G+ PD +TYN
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 281 TIIDGYCKKGMVQDANRILKD 301
++ G C G ++ A I +D
Sbjct: 405 ILLGGLCDNGELEKALVIFED 425
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 129/232 (55%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P+V +Y+A+++ V+ G +A +++ M + D+ TY+ I C R A ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
M GC + V+Y T++ GF + + +LF EM +R L + T+N L+ G +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G V ++++ +++ G+SP+++TYNI + GLC G L++A+V + + M D+VT
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
Y TVI G+C+ +V E+ + GL+PD TY T++ G C KG++ +
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 135/261 (51%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K+ +A+D+F M PS+ +N +++ +V+ ++ + +M+ G+ +D+YT+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I I FC + AL +L M G + V ++V GF A L D+M+E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
PD+ +N ++ LCK V ++ ++ ++G+ PN+ TY + GLC A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
L + ++ ++P+V+TY+ ++ + +V+E++E +MV + PD TY+++I+G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 286 YCKKGMVQDANRILKDAVFKG 306
C + +AN++ V KG
Sbjct: 305 LCLHDRIDEANQMFDLMVSKG 325
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+V A+ + +M EP + +++N + A + +M + G D+ Y
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I S C+T R + A + + G N V Y +V G A L +M+++
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P+V T++ L+ K G V E+++L ++++ + P++ TY+ I GLC +D A
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ +G DVV+YNT+I G C+ RV + + +M GL + TYNT+I G
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 286 YCKKGMVQDANRILKDAVFKGF 307
+ + G V A F G
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGI 396
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%)
Query: 155 ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQ 214
A +LF +M++ P + FN+L+ + K L K+ G+ +L+T+NI I
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 215 GLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQP 274
C + A+ LG + + G PD VT +++ G CR++RV ++ + KMV G +P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 275 DEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
D YN IID CK V DA K+ KG +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR 222
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ + + G V +A + F +MD + P + +YN ++ L + G +A ++ M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ + + D+ TYT I+ C+TG+ A L ++S+ G + V Y T+++G G
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
L+ +M + L + T + G + S +L+ K+L G +P+L
Sbjct: 487 HEVEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 132/251 (52%)
Query: 49 EAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRI 108
+AV + M + P V SYN ++ E +A ++ MK G + T+ I I
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 109 KSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC 168
+FC+ G+ A+ L+ M G + V Y +++ GF + G+ D + LFDE+LER
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
P T+N L+ G CK G + E+ ++ +++RGV PN++TY I GLC G A+
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
L + + P+ VTYN +I LC+ V ++ E + M +PD TYN ++ G C
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 289 KGMVQDANRIL 299
KG + +A+++L
Sbjct: 400 KGDLDEASKLL 410
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 155/299 (51%), Gaps = 7/299 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEG--AYVEAMRSYGRFGKVQEAVDVFERMD 58
+L+ L + E + +LL EMR N+L+ +Y +R + ++++A+++ M
Sbjct: 148 LLKGLCRNLECGKAVSLLREMR---RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
C S+ ++ +++ + G ++A MK G+ +D+ YT I+ FC G
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
L + G S A+ Y T++ GF + G A E+F+ M+ER + P+V T+ L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
GLC G E+ +LLN ++++ PN TYNI I LC++G + AV + + +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDG--LQPDEFTYNTIIDGYCKKGMVQDA 295
PD +TYN ++ GLC K + E+ + L+ M+ D PD +YN +I G CK+ + A
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 116/236 (49%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
+V+++N ++ L +A + M+ + DV++Y I+ FC AL L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
M GCS++ V + ++ F + G D A EM L D+ + L+ G C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
G + + L ++VL+RG SP TYN I+G C+ G L A + G+ P+V TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+I GLC + E+ + L+ M+ +P+ TYN II+ CK G+V DA I++
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 131/266 (49%), Gaps = 2/266 (0%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV-YMRMKDKG-VGSDVY 102
G V +AV++ E M P +YN ++ L G ++A K+ Y+ +KD DV
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
+Y I C+ R H AL + + + + V ++ + GD + A EL+ ++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ + + T+ ++ G CK G + ++ LL K+ + P++F YN + LC+EG+L
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
D+A + R+ PDVV++N +I G + + +E L M GL PD FTY+ +
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 283 IDGYCKKGMVQDANRILKDAVFKGFK 308
I+ + K G + +A V GF+
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFE 631
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 111/232 (47%)
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
S + ++ V+ A V M +G +VY + I +K CR A+ LLR M
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
+ +Y TV+ GF E + + A EL +EM + T+ L+ CK G +
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
E+ L ++ G+ +L Y I+G C G LDR V G SP +TYNT+
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
I G C+ ++ E+ E M+ G++P+ +TY +IDG C G ++A ++L
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 2/263 (0%)
Query: 45 GKVQEAVDVFERM--DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
G + EA + M D +P V SYNA+++ L + +QA +Y + +K D
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
T I + S + G + A+ L + +S N+ Y ++ GF + G ++A+ L +M
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
L P V +N L+ LCK+G + ++ +L ++ + P++ ++NI I G + G +
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
A L +SR G+SPD+ TY+ +I + + E+ KMV+ G +PD +++
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSV 640
Query: 283 IDGYCKKGMVQDANRILKDAVFK 305
+ +G ++K V K
Sbjct: 641 LKYCISQGETDKLTELVKKLVDK 663
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 125/256 (48%), Gaps = 1/256 (0%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
++ +A+D+++ + + N ++N ++ G N+A +++ ++ D + + TYT
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYT 498
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I FC+TG + A LL M V + Y +++ + G D A LF+EM
Sbjct: 499 AMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD 558
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ PDV +FN ++ G K G + +E LL + + G+SP+LFTY+ I + G LD A
Sbjct: 559 NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEA 618
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ F + G PD ++V+ + + E + K+V+ + D+ T++D
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDY 678
Query: 286 YCKKGMVQD-ANRILK 300
C D A R+L+
Sbjct: 679 MCNSSANMDLAKRLLR 694
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 143/308 (46%), Gaps = 12/308 (3%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+++KL + R ++++ N SE L + L E + + + F Q+AVD +
Sbjct: 19 VVRKLLNPRVYSKLVNAFSETETKLRS-LCEDSNPQLKNAVSVF---QQAVDSGSSL--- 71
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+ N +M LV A Y +M + + + + ++ + + + A
Sbjct: 72 -----AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFA 126
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+L M G +FN + ++ G + A L EM SL PDV ++N ++ G
Sbjct: 127 FGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRG 186
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
C+ + ++ +L N++ G S +L T+ I I C+ G +D A+ FL + G+ D
Sbjct: 187 FCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEAD 246
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+V Y ++I G C + + +++ G P TYNT+I G+CK G +++A+ I +
Sbjct: 247 LVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE 306
Query: 301 DAVFKGFK 308
+ +G +
Sbjct: 307 FMIERGVR 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + + + G + A + +M + +PSV YN +++ L + G +QA +++ M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ DV ++ I I + G +A LL MS G S + Y ++ F + G
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGV 202
D A FD+M++ PD + ++ +G + +L+ K++ + +
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 142/268 (52%), Gaps = 1/268 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y E ++ Y + V +A+ V +M P V +YN++++ G F+ A+++ M
Sbjct: 430 TYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
D+G+ D +TYT I S C++ R A L ++ G + N V Y ++ G+ + G
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A + ++ML ++ P+ TFN L+HGLC G + E+ L K++K G+ P + T I
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I L ++G D A + G PD TY T I CR+ R++++E+ + KM +G+
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILK 300
PD FTY+++I GY G A +LK
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 138/267 (51%)
Query: 22 RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGY 81
R L+ L+ G Y + S RFG V E V+ M P++++YN ++N + G
Sbjct: 174 RFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGN 233
Query: 82 FNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCT 141
+A++ ++ + G+ D +TYT I +C+ +A ++ M + GC N VAY
Sbjct: 234 VEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 142 VVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG 201
++ G D A +LF +M + P V T+ L+ LC E+ L+ ++ + G
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 202 VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESE 261
+ PN+ TY + I LC + ++A LG + +G+ P+V+TYN +I G C++ + ++
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 262 ECLHKMVNDGLQPDEFTYNTIIDGYCK 288
+ + M + L P+ TYN +I GYCK
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCK 440
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 145/276 (52%), Gaps = 1/276 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++S + EA+++ + M+ +P++H+Y +++ L F +A ++ +M
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+KG+ +V TY I +C+ G A+ ++ M S N Y ++ G+ + +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNV 443
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A + ++MLER + PDV T+N L+ G C+ G + +LL+ + RG+ P+ +TY
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I LC+ ++ A S+ ++G++P+VV Y +I G C+ +V E+ L KM++
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
P+ T+N +I G C G +++A + + V G +
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN ++N L FG ++ +VYM M + V ++YTY + +C+ G A + + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G + Y +++ G+ + D D A ++F+EM + + + L+HGLC +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E+ L K+ P + TY + I+ LC A+ + + G+ P++ TY +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
LC + + ++ E L +M+ GL P+ TYN +I+GYCK+GM++DA
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 143/320 (44%), Gaps = 39/320 (12%)
Query: 16 NLLSEMRAT-LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMN 74
NL+ EM T ++ N+ Y + S K ++A ++ +M P+V +YNA++N
Sbjct: 344 NLVKEMEETGIKPNI--HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 75 ILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSF 134
+ G A V M+ + + + TY IK +C++ H A+ +L M
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLP 460
Query: 135 NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL 194
+ V Y +++ G G+ D A L M +R L PD T+ ++ LCK V E+ L
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 195 NKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRK 254
+ + ++GV+PN+ Y I G C+ G +D A + L + + P+ +T+N +I GLC
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 255 SRVVESEECLHKMVNDGLQ-----------------------------------PDEFTY 279
++ E+ KMV GLQ PD TY
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 280 NTIIDGYCKKGMVQDANRIL 299
T I YC++G + DA ++
Sbjct: 641 TTFIQTYCREGRLLDAEDMM 660
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 14/246 (5%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDK--GVGSDVYTYTIRIKSFCRTGRPHAALR 122
SV+SY +++ +L+ GY K+ + M VG +Y + CR
Sbjct: 122 SVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALY-----VLDLCRKMNKDERFE 176
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
L + + GC Y T++ FG D ++++ EMLE +CP++ T+NK+V+G C
Sbjct: 177 LKYKL-IIGC------YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC 229
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K G V E+ + ++K+++ G+ P+ FTY I G C+ LD A + +G + V
Sbjct: 230 KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV 289
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
Y +I GLC R+ E+ + KM +D P TY +I C +A ++K+
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 303 VFKGFK 308
G K
Sbjct: 350 EETGIK 355
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 146/313 (46%), Gaps = 24/313 (7%)
Query: 14 MENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIM 73
+E +LS + L N+L A + + + G K++EA + E+M +P+V + ++
Sbjct: 555 LEKMLS--KNCLPNSLTFNALIHGLCADG---KLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 74 NILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCS 133
+ L++ G F+ A+ + +M G D +TYT I+++CR GR A ++ M G S
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 134 FNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC------KKGFV 187
+ Y +++ G+ + G + A ++ M + P TF L+ L +KG
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Query: 188 PE------------SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR- 234
PE +LL K+++ V+PN +Y I G+C G L A + R
Sbjct: 730 PELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Query: 235 EGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
EG+SP + +N ++ C+ + E+ + + M+ G P + +I G KKG +
Sbjct: 790 EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKER 849
Query: 295 ANRILKDAVFKGF 307
+ ++ + G+
Sbjct: 850 GTSVFQNLLQCGY 862
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 19/268 (7%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G A F++M +P H+Y + G A + +M++ GV D++TY
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYE--FGDR---------- 152
+ IK + G+ + A +L+ M GC + + +++ E +G +
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 153 ------DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK-RGVSPN 205
D EL ++M+E S+ P+ ++ KL+ G+C+ G + +EK+ + + + G+SP+
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 206 LFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLH 265
+N + C+ + A + + G P + + +ICGL +K
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQ 293
++ G DE + IIDG K+G+V+
Sbjct: 856 NLLQCGYYEDELAWKIIIDGVGKQGLVE 883
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 124/274 (45%), Gaps = 23/274 (8%)
Query: 15 ENLLSEMRATLENNLLEG--AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAI 72
E+++++MR EN + Y ++ YG G+ A DV +RM CEPS H++ ++
Sbjct: 657 EDMMAKMR---ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 73 MNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGC 132
+ L+E Y Q KG ++ + + F + LL M
Sbjct: 714 IKHLLEMKYGKQ----------KGSEPELCAMS-NMMEF------DTVVELLEKMVEHSV 756
Query: 133 SFNAVAYCTVVAGFYEFGDRDLARELFDEMLE-RSLCPDVATFNKLVHGLCKKGFVPESE 191
+ NA +Y ++ G E G+ +A ++FD M + P FN L+ CK E+
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 192 KLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGL 251
K+++ ++ G P L + + I GL ++G +R ++ + G D + + +I G+
Sbjct: 817 KVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV 876
Query: 252 CRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
++ V E + M +G + TY+ +I+G
Sbjct: 877 GKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 135/261 (51%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K EAV + +RM C+P++ +Y ++N L + G + A + +M+ + +DV +
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I S C+ AL L + M G N V Y ++++ +G A +L +M+E+
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P++ TFN L+ K+G E+EKL + ++KR + P++FTYN + G C LD+A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + PDVVTYNT+I G C+ RV + E +M + GL D TY T+I G
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 286 YCKKGMVQDANRILKDAVFKG 306
G +A ++ K V G
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDG 465
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 152/282 (53%), Gaps = 5/282 (1%)
Query: 11 FNQMENLLSEM-RATLENNLLE-GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
++ LLS+M + NL+ A ++A G+F EA +++ M + +P + +
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF---VEAEKLYDDMIKRSIDPDIFT 367
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN+++N ++A +++ M K DV TY IK FC++ R L R MS
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G + V Y T++ G + GD D A+++F +M+ + PD+ T++ L+ GLC G +
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
++ ++ + + K + +++ Y I+G+C+ G +D S+S +G+ P+VVTYNT+I
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
GLC K + E+ L KM DG P+ TYNT+I + + G
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 154/303 (50%), Gaps = 7/303 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAV-DVFERM 57
++ L +R + NL EM + N + + + + SYGR+ + + D+ E+
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK- 324
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
P++ ++NA+++ V+ G F +A K+Y M + + D++TY + FC R
Sbjct: 325 ---KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
A ++ M C + V Y T++ GF + + ELF EM R L D T+ L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ GL G ++K+ +++ GV P++ TY+I + GLC G L++A+ + + +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
D+ Y T+I G+C+ +V + + + G++P+ TYNT+I G C K ++Q+A
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 298 ILK 300
+LK
Sbjct: 562 LLK 564
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 134/251 (53%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G A+++ +M+ E V +N I++ L ++ + + A ++ M+ KG+ +V TY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I C GR A +LL +M + N V + ++ F + G A +L+D+M++
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
RS+ PD+ T+N LV+G C + +++++ ++ + P++ TYN I+G C+ ++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+S G+ D VTY T+I GL +++ +MV+DG+ PD TY+ ++D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 285 GYCKKGMVQDA 295
G C G ++ A
Sbjct: 479 GLCNNGKLEKA 489
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 147/289 (50%), Gaps = 8/289 (2%)
Query: 28 NLLEGAYVEA--------MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEF 79
N +E A +EA + S ++ V +A+++F+ M+ P+V +Y+++++ L +
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 80 GYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAY 139
G ++ A ++ M +K + ++ T+ I +F + G+ A +L +M + Y
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 140 CTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
++V GF D A+++F+ M+ + PDV T+N L+ G CK V + +L ++
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 200 RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVE 259
RG+ + TY IQGL +G D A + +G+ PD++TY+ ++ GLC ++ +
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 260 SEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ E M ++ D + Y T+I+G CK G V D + KG K
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 137/275 (49%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
G Y E +R+ K+ +A+ +F M PS+ +N +++ + + F+ +
Sbjct: 50 SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE 109
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
+M+ + +YTY I I FCR + AL LL M G + V +++ G+
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
A L D+M+E PD TF L+HGL E+ L++++++RG PNL TY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
+ + GLC+ G D A+ L + + DVV +NT+I LC+ V ++ +M
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
G++P+ TY+++I C G DA+++L D + K
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 133/270 (49%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ Y ++ +AV + ++M P ++ +++ L ++A + RM +G
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
++ TY + + C+ G AL LL M + V + T++ ++ D A
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
LF EM + + P+V T++ L+ LC G ++ +LL+ ++++ ++PNL T+N I
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+EG A + + + PD+ TYN+++ G C R+ ++++ MV+ PD
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
TYNT+I G+CK V+D + ++ +G
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 126/266 (47%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ + + K + + E+M +++YN ++N + A + +M G
Sbjct: 92 LSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY 151
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+ T + + +C R A+ L+ M G + + + T++ G + A
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
L D M++R P++ T+ +V+GLCK+G + LLNK+ + ++ +N I LC
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+ +D A+ + +G+ P+VVTY+++I LC R ++ + L M+ + P+
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAV 303
T+N +ID + K+G +A ++ D +
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMI 357
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+++A++VF+ M + ++ Y ++ + + G + ++ + KGV +V TY
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I C A LL+ M G N+ Y T++ GD+ + EL EM
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Query: 165 RSLCPDVATF----NKLVHGLCKKGFV 187
D +T N L G K F+
Sbjct: 604 CRFVGDASTIGLVANMLHDGRLDKSFL 630
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 148/275 (53%), Gaps = 2/275 (0%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y ++ Y R G + A+++ M C V +YN I++ L + +A K++ M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
++ + D YT TI I C+ G A+ L + M + V Y T++ GF + GD D
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A+E++ +M+ + + P +++ LV+ LC KG + E+ ++ ++++ + + P + N I
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND--G 271
+G CR G FL + EG PD ++YNT+I G R+ + ++ + KM + G
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
L PD FTYN+I+ G+C++ +++A +L+ + +G
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 135/262 (51%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
S R G V+ A V++ + +V++ N ++N L + G + ++++KGV
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP 268
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
D+ TY I ++ G A L+ M G S Y TV+ G + G + A+E+F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCRE 219
EML L PD T+ L+ CKKG V E+EK+ + + R V P+L ++ + R
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTY 279
G LD+A+++ SV G+ PD V Y +I G CRK + + ++M+ G D TY
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 280 NTIIDGYCKKGMVQDANRILKD 301
NTI+ G CK+ M+ +A+++ +
Sbjct: 449 NTILHGLCKRKMLGEADKLFNE 470
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 150/308 (48%), Gaps = 3/308 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
++ L H ++ + + + +EM R+ L + Y + + G V E VF M
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPD--STTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+ P + ++++M++ G ++A + +K+ G+ D YTI I+ +CR G
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A+ L M GC+ + V Y T++ G + A +LF+EM ER+L PD T L+
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
G CK G + + +L K+ ++ + ++ TYN + G + G +D A + + + P
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
++Y+ ++ LC K + E+ +M++ ++P N++I GYC+ G D L
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 300 KDAVFKGF 307
+ + +GF
Sbjct: 609 EKMISEGF 616
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 135/266 (50%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ GK + A +VF M P +Y +++ + G + KV+ M+ + V D+
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
++ + F R+G AL ++ G + V Y ++ G+ G +A L +EM
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
L++ DV T+N ++HGLCK+ + E++KL N++ +R + P+ +T I I G C+ G L
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
A+ + + + DVVTYNT++ G + + ++E MV+ + P +Y+ +
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 283 IDGYCKKGMVQDANRILKDAVFKGFK 308
++ C KG + +A R+ + + K K
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIK 582
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 70/304 (23%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R+Y + K++EA + F + S+ + NA++ LV G+ A VY + GV
Sbjct: 172 IRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGV 231
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
G +VYT I + + C+ G+ M G + V
Sbjct: 232 GINVYTLNIMVNALCKDGK----------MEKVGTFLSQVQ------------------- 262
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
E+ + PD+ T+N L+ KG + E+ +L+N + +G SP ++TYN I GLC
Sbjct: 263 ------EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE--------------- 262
+ G +RA + R G+SPD TY +++ C+K VVE+E+
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 263 CLHKMVN--------------------DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
C M++ GL PD Y +I GYC+KGM+ A + +
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 303 VFKG 306
+ +G
Sbjct: 437 LQQG 440
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 127/255 (49%), Gaps = 25/255 (9%)
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRM-KDKGV----------------GSDVYTYTIRIKS 110
S +A+++ILV G + A +RM + GV GS+ + + I++
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRT 174
Query: 111 FCRTGR---PHAALRLLRNMSVFGCSFNAVAYCTVVAG-FYEFGDRDLARELFDEMLERS 166
+ + + H A LLR+ F S +A C + G G +LA ++ E+
Sbjct: 175 YVQARKLREAHEAFTLLRSKG-FTVSIDA---CNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
+ +V T N +V+ LCK G + + L++V ++GV P++ TYN I +G ++ A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
+ ++ +G SP V TYNTVI GLC+ + ++E +M+ GL PD TY +++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 287 CKKGMVQDANRILKD 301
CKKG V + ++ D
Sbjct: 351 CKKGDVVETEKVFSD 365
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 4 KLGHHREFNQMENLLSEMRATLE----NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
KLG+ + ++ + E R L+ N LL+G +G+ G + A +++ M
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG--------FGKVGDIDTAKEIWADMVS 543
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
P+ SY+ ++N L G+ +A +V+ M K + V IK +CR+G
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS--LCPDVATFNKL 177
L M G + ++Y T++ GF + A L +M E L PDV T+N +
Sbjct: 604 GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI 663
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+HG C++ + E+E +L K+++RGV+P+ TY I G + L A + + G
Sbjct: 664 LHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Query: 238 SPD 240
SPD
Sbjct: 724 SPD 726
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%)
Query: 172 ATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGS 231
+ F+ L+ + + E+ + + +G + ++ N I L R G ++ A
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 232 VSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGM 291
+SR G+ +V T N ++ LC+ ++ + L ++ G+ PD TYNT+I Y KG+
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 292 VQDANRILKDAVFKGF 307
+++A ++ KGF
Sbjct: 286 MEEAFELMNAMPGKGF 301
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 160/311 (51%), Gaps = 12/311 (3%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAV-DVFERM 57
++ L +++ N NL +EM + N + + + + +YGR+ + D+ ER
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER- 320
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
P+V +++A+++ V+ G +A K+Y M + + D++TY+ I FC R
Sbjct: 321 ---KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
A + M C N V Y T++ GF + D ELF EM +R L + T+ L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+HG + ++ + +++ GV P++ TY+I + GLC G ++ A+V + R M
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
PD+ TYN +I G+C+ +V + + + G++P+ TY T++ G+C+KG+ ++A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA-- 555
Query: 298 ILKDAVFKGFK 308
DA+F+ K
Sbjct: 556 ---DALFREMK 563
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 157/292 (53%), Gaps = 5/292 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
+++ L ++ ++ LLS+M R N + A ++A + + GK+ EA +++ M
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA---FVKEGKLVEAEKLYDEMI 353
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
+ +P + +Y++++N ++A ++ M K +V TY IK FC+ R
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
+ L R MS G N V Y T++ GF++ + D A+ +F +M+ + PD+ T++ L+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
GLC G V + + + + + P+++TYNI I+G+C+ G ++ S+S +G+
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
P+VVTY T++ G CRK E++ +M +G PD TYNT+I + + G
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 134/251 (53%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + A+ + ++M+ EP V YN I++ L + N A ++ M +KG+ +V TY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I+ C GR A RLL +M + N V + ++ F + G A +L+DEM++
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
RS+ PD+ T++ L++G C + E++ + ++ + PN+ TYN I+G C+ +D
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+ +S+ G+ + VTY T+I G + ++ +MV+DG+ PD TY+ ++D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 285 GYCKKGMVQDA 295
G C G V+ A
Sbjct: 475 GLCNNGKVETA 485
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 137/258 (53%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K+ +AV++F M PS+ ++ +++ + + F+ + +M++ G+ ++YTY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I I FCR + AL +L M G + V +++ GF A L +M+E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
PD TFN L+HGL + E+ L+++++ +G P+L TY I + GLC+ G +D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ L + + + P VV YNT+I LC V ++ +M N G++P+ TYN++I
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 286 YCKKGMVQDANRILKDAV 303
C G DA+R+L D +
Sbjct: 301 LCNYGRWSDASRLLSDMI 318
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 8/280 (2%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
N L+ G + R + EAV + +RM + C+P + +Y ++N L + G + A
Sbjct: 190 NTLIHGLF--------RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
+ +M+ + V Y I + C + AL L M G N V Y +++
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
+G A L +M+ER + P+V TF+ L+ K+G + E+EKL ++++KR + P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
FTY+ I G C LD A + + P+VVTYNT+I G C+ RV E E +
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
M GL + TY T+I G+ + +A + K V G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 131/262 (50%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
++ +AV + +M +P ++N +++ L ++A + RM KG D+ TY
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I + C+ G AL LL+ M V Y T++ + + + A LF EM +
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P+V T+N L+ LC G ++ +LL+ +++R ++PN+ T++ I +EG L A
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + + PD+ TY+++I G C R+ E++ M++ P+ TYNT+I G
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 286 YCKKGMVQDANRILKDAVFKGF 307
+CK V + + ++ +G
Sbjct: 406 FCKAKRVDEGMELFREMSQRGL 427
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 143/293 (48%), Gaps = 8/293 (2%)
Query: 13 QMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAI 72
QM+NL + +NL Y + + R ++ A+ V +M EP + + N++
Sbjct: 106 QMQNL------GISHNLY--TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSL 157
Query: 73 MNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGC 132
+N + A + +M + G D +T+ I R R A+ L+ M V GC
Sbjct: 158 LNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC 217
Query: 133 SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEK 192
+ V Y VV G + GD DLA L +M + + P V +N ++ LC V ++
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 193 LLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLC 252
L ++ +G+ PN+ TYN I+ LC G A L + ++P+VVT++ +I
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 253 RKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
++ ++VE+E+ +M+ + PD FTY+++I+G+C + +A + + + K
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GKV+ A+ VFE + EP +++YN ++ + + G ++ + KGV +V TY
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
T + FCR G A L R M G ++ Y T++ GD+ + EL EM
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Query: 165 RSLCPDVATF----NKLVHGLCKKGFV 187
D +T N L G K F+
Sbjct: 600 CRFVGDASTIGLVTNMLHDGRLDKSFL 626
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 60/120 (50%)
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
++ L ++K P++ ++ + + + D + + G+S ++ TY+ +I
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
CR+S++ + L KM+ G +PD T N++++G+C + DA ++ V G++
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 151/282 (53%), Gaps = 5/282 (1%)
Query: 11 FNQMENLLSEM-RATLENNLLE-GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
++ LLS+M + NL+ A ++A G+F EA + + M + +P + +
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF---VEAEKLHDDMIKRSIDPDIFT 292
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN+++N ++A +++ M K D+ TY IK FC++ R L R MS
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G + V Y T++ G + GD D A+++F +M+ + PD+ T++ L+ GLC G +
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
++ ++ + + K + +++ Y I+G+C+ G +D S+S +G+ P+VVTYNT+I
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
GLC K + E+ L KM DG PD TYNT+I + + G
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 134/261 (51%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K EAV + +RM C+P++ +Y ++N L + G + A + +M+ + +DV +
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I S C+ AL L + M G N V Y ++++ +G A +L +M+E+
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P++ TFN L+ K+G E+EKL + ++KR + P++FTYN I G C LD+A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + PD+ TYNT+I G C+ RV + E +M + GL D TY T+I G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 286 YCKKGMVQDANRILKDAVFKG 306
G +A ++ K V G
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDG 390
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 153/303 (50%), Gaps = 7/303 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAV-DVFERM 57
++ L +R + NL EM + N + + + + SYGR+ + + D+ E+
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK- 249
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
P++ ++NA+++ V+ G F +A K++ M + + D++TY I FC R
Sbjct: 250 ---KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
A ++ M C + Y T++ GF + + ELF EM R L D T+ L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ GL G ++K+ +++ GV P++ TY+I + GLC G L++A+ + + +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
D+ Y T+I G+C+ +V + + + G++P+ TYNT+I G C K ++Q+A
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 298 ILK 300
+LK
Sbjct: 487 LLK 489
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 125/242 (51%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
PS+ +N +++ + + F+ + +M+ G+ ++YTY I I FCR + AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
L M G + V +++ G+ A L D+M+E PD TF L+HGL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
E+ L++++++RG PNL TY + + GLC+ G +D A L + + DVV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
+NT+I LC+ V ++ +M G++P+ TY+++I C G DA+++L D +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 304 FK 305
K
Sbjct: 248 EK 249
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 133/251 (52%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + A ++ +M+ E V +N I++ L ++ + + A ++ M+ KG+ +V TY
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I C GR A +LL +M + N V + ++ F + G A +L D+M++
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
RS+ PD+ T+N L++G C + +++++ ++ + P+L TYN I+G C+ ++
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+S G+ D VTY T+I GL +++ +MV+DG+ PD TY+ ++D
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 285 GYCKKGMVQDA 295
G C G ++ A
Sbjct: 404 GLCNNGKLEKA 414
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 147/289 (50%), Gaps = 8/289 (2%)
Query: 28 NLLEGAYVEA--------MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEF 79
N +E A +EA + S ++ V +A+++F+ M+ P+V +Y+++++ L +
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 80 GYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAY 139
G ++ A ++ M +K + ++ T+ I +F + G+ A +L +M + Y
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 140 CTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
+++ GF D A+++F+ M+ + PD+ T+N L+ G CK V + +L ++
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 200 RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVE 259
RG+ + TY IQGL +G D A + +G+ PD++TY+ ++ GLC ++ +
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 260 SEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ E M ++ D + Y T+I+G CK G V D + KG K
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 132/270 (48%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ Y ++ +AV + ++M P ++ +++ L ++A + RM +G
Sbjct: 87 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 146
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
++ TY + + C+ G A LL M + V + T++ ++ D A
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
LF EM + + P+V T++ L+ LC G ++ +LL+ ++++ ++PNL T+N I
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+EG A + + + PD+ TYN++I G C R+ ++++ MV+ PD
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
TYNT+I G+CK V+D + ++ +G
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 128/266 (48%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ + + K + + E+M ++++YN ++N + A + +M G
Sbjct: 17 LSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGY 76
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+ T + + +C R A+ L+ M G + + + T++ G + A
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
L D M++R P++ T+ +V+GLCK+G + + LLNK+ + ++ +N I LC
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+ +D A+ + +G+ P+VVTY+++I LC R ++ + L M+ + P+
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAV 303
T+N +ID + K+G +A ++ D +
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMI 282
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%)
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEEC 263
P++F +N + + + D + + R G+S ++ TYN +I CR+S++ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 264 LHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
L KM+ G +P T +++++GYC + DA ++ V G++
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 112
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+++A++VF+ M + ++ Y ++ + + G + ++ + KGV +V TY
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I C A LL+ M G ++ Y T++ GD+ + EL EM
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Query: 165 RSLCPDVATF----NKLVHGLCKKGFV 187
D +T N L G K F+
Sbjct: 529 CRFVGDASTIGLVANMLHDGRLDKSFL 555
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 136/287 (47%), Gaps = 36/287 (12%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
+ +AV V E ++ + +P V +YNA++N + + A +V RM+ K D TY I
Sbjct: 140 IPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I S C G+ AL++L + C + Y ++ G D A +L DEML R
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 167 LCPDVATFNKLVHGLCKKGFV-----------------------------------PESE 191
L PD+ T+N ++ G+CK+G V E E
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 192 KLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGL 251
KL+ K+ PN+ TY+I I LCR+G ++ A+ L + +G++PD +Y+ +I
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 252 CRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
CR+ R+ + E L M++DG PD YNT++ CK G A I
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 140/274 (51%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y +R + G V A ++ ++L CEP V SYN ++ L+ G + + K+ +M
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ +V TY+I I + CR G+ A+ LL+ M G + +A +Y ++A F G
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D+A E + M+ PD+ +N ++ LCK G ++ ++ K+ + G SPN +YN
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
L G RA+ + + G+ PD +TYN++I LCR+ V E+ E L M +
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
P TYN ++ G+CK ++DA +L+ V G
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 149/292 (51%), Gaps = 35/292 (11%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ A+ V ++ NC+P+V +Y ++ + G ++A K+ M +G+ D++TY
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I+ C+ G A ++RN+ + GC + ++Y ++ G + +L +M
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
P+V T++ L+ LC+ G + E+ LL + ++G++P+ ++Y+ I CREG LD
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE---------------------- 262
A+ FL ++ +G PD+V YNTV+ LC+ + ++ E
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 263 ----------CLH---KMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
LH +M+++G+ PDE TYN++I C++GMV +A +L D
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 136/271 (50%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y +R+ GK +E + +M C+P+V +Y+ ++ L G +A + M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K+KG+ D Y+Y I +FCR GR A+ L M GC + V Y TV+A + G
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A E+F ++ E P+ +++N + L G + ++ +++ G+ P+ TYN
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I LCREG +D A L + P VVTYN V+ G C+ R+ ++ L MV +G
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
+P+E TY +I+G G +A + D V
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 108/195 (55%), Gaps = 1/195 (0%)
Query: 112 CRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDV 171
CR+G +L LL M G + + + ++ GF+ + A + E+LE+ PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 172 ATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGS 231
+N L++G CK + ++ ++L+++ + SP+ TYNI I LC G LD A+ L
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 232 VSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGM 291
+ + P V+TY +I + V E+ + + +M++ GL+PD FTYNTII G CK+GM
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 292 VQDANRILKDAVFKG 306
V A ++++ KG
Sbjct: 279 VDRAFEMVRNLELKG 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y + + + GK +A+++F ++ C P+ SYN + + L G +A + + M
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSF--NAVAYCTVVAGFYEFGD 151
G+ D TY I CR G A LL +M C F + V Y V+ GF +
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR--SCEFHPSVVTYNIVLLGFCKAHR 523
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
+ A + + M+ P+ T+ L+ G+ G+ E+ +L N +++
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 163/297 (54%), Gaps = 9/297 (3%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLEN-NLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
M++KL + + ++ LL +M+ L+ + E ++ + Y + G + AV++F R+
Sbjct: 82 MIRKLAMDGQVDSVQYLLQQMK--LQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKE 139
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+ C+PSV YN +++ L+ + VY MK G +V+TY + +K+ C+ +
Sbjct: 140 FGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDG 199
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A +LL MS GC +AV+Y TV++ E G REL E E P V+ +N L++
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-AERFE----PVVSVYNALIN 254
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
GLCK+ + +L+ +++++G+SPN+ +Y+ I LC G ++ A FL + + G P
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQPDEFTYNTIIDGYCKKGMVQDA 295
++ T ++++ G + ++ + ++M+ GLQP+ YNT++ G+C G + A
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 138/279 (49%), Gaps = 5/279 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY ++ + G + +AV VF M+ C P++ +Y +++N + G + A ++ +M
Sbjct: 354 AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
G +V YT +++ CR + A L+ MS C+ + + + G + G
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 153 DLARELFDEMLERSLC-PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
D A ++F +M ++ C P++ T+N+L+ GL K + E+ L ++ RGV + TYN
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNT 533
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
+ G C G A+ +G + +G SPD +T N +I C++ + + + L +V+ G
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCG 592
Query: 272 ---LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+PD +Y +I G C+ +D +L+ + G
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGI 631
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 2/261 (0%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
A ++ M P+V SY+ ++N+L G A +M +G ++YT + +K
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 110 SFCRTGRPHAALRLLRNM-SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC 168
G AL L M FG N VAY T+V GF G+ A +F M E
Sbjct: 325 GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS 384
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
P++ T+ L++G K+G + + + NK+L G PN+ Y ++ LCR A
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL 444
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG-LQPDEFTYNTIIDGYC 287
+ +S+E +P V T+N I GLC R+ +E+ +M P+ TYN ++DG
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLA 504
Query: 288 KKGMVQDANRILKDAVFKGFK 308
K +++A + ++ +G +
Sbjct: 505 KANRIEEAYGLTREIFMRGVE 525
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 5/205 (2%)
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
T+ + I+ G+ + LL+ M + G + + +V++ + + G + A E+F +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
E P V +N ++ L + + + + + G PN+FTYN+ ++ LC+ +
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
D A L +S +G PD V+Y TVI +C V E E + +P YN +
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNAL 252
Query: 283 IDGYCKKGMVQDANRILKDAVFKGF 307
I+G CK+ + A ++++ V KG
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGI 277
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 141/259 (54%), Gaps = 2/259 (0%)
Query: 21 MRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFG 80
M+ +E N++ + + ++ + GK+ EA +++ M + P V +Y +++N L +G
Sbjct: 250 MKRRIEPNVI--TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 81 YFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYC 140
++A +++ M+ G + YT I FC++ R +++ MS G N + Y
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 141 TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR 200
++ G+ G D+A+E+F++M R PD+ T+N L+ GLC G V ++ + + KR
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 201 GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
+ N+ TY I IQG+C+ G ++ A S+ +GM P+V+TY T+I G CR+ + E+
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 261 EECLHKMVNDGLQPDEFTY 279
+ KM DG P+E Y
Sbjct: 488 DSLFKKMKEDGFLPNESVY 506
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 157/309 (50%), Gaps = 5/309 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
+++ L +R N L ++M + N + A V + GR+G +A + M
Sbjct: 194 LIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG---DAAWLLRDMM 250
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
EP+V ++ A+++ V+ G +A ++Y M V DV+TY I C G
Sbjct: 251 KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A ++ M GC N V Y T++ GF + + ++F EM ++ + + T+ L+
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
G C G ++++ N++ R P++ TYN+ + GLC G +++A++ + + M
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
++VTY +I G+C+ +V ++ + + + G++P+ TY T+I G+C++G++ +A+ +
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490
Query: 299 LKDAVFKGF 307
K GF
Sbjct: 491 FKKMKEDGF 499
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 141/280 (50%), Gaps = 2/280 (0%)
Query: 21 MRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFG 80
M+ E +L+ + + Y + ++++A+ +F+++ +P+V +Y ++ L +
Sbjct: 145 MKLGFEPDLV--TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 81 YFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYC 140
+ N A +++ +M G +V TY + C GR A LLR+M N + +
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 141 TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR 200
++ F + G A+EL++ M++ S+ PDV T+ L++GLC G + E+ ++ + +
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 201 GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
G PN Y I G C+ ++ + +S++G+ + +TY +I G C R +
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 261 EECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+E ++M + PD TYN ++DG C G V+ A I +
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 129/254 (50%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+ +A+D+F RM PS+ + +++++ + ++ ++ +M+ G+ + T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I + C + +P A L M G + V + +++ G+ + + A LFD++L
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
P+V T+ L+ LCK + + +L N++ G PN+ TYN + GLC G A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
L + + + P+V+T+ +I + +++E++E + M+ + PD FTY ++I+G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 286 YCKKGMVQDANRIL 299
C G++ +A ++
Sbjct: 303 LCMYGLLDEARQMF 316
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%)
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D+ LF++M + P + T N ++H +C + L K++K G P+L T+
Sbjct: 100 DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL 159
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ G C ++ A+ + G P+VVTY T+I LC+ + + E ++M +G
Sbjct: 160 LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS 219
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+P+ TYN ++ G C+ G DA +L+D
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRD 248
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 143/271 (52%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E Y + + G ++ +++E+M P++++YN +MN L + G A +V+
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
M+++GV ++ TY I CR + + A +++ M G + N + Y T++ GF G
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
A L ++ R L P + T+N LV G C+KG + K++ ++ +RG+ P+ TY
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I I R +++A+ S+ G+ PDV TY+ +I G C K ++ E+ MV
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+P+E YNT+I GYCK+G A ++LK+
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 154/300 (51%), Gaps = 1/300 (0%)
Query: 8 HREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVH 67
H +F +LL + + + Y + SY + + ++ F M P +
Sbjct: 71 HSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSN 130
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+N ++ +V FNQ + K K V DVY++ I IK C G + LL +
Sbjct: 131 CFNYLLTFVVGSSSFNQWWSFFNENKSKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIEL 189
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
+ FG S N V Y T++ G + G+ + A++LF EM + L + T+ L++GL K G
Sbjct: 190 TEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVK 249
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
+ ++ K+ + GV PNL+TYN + LC++G A + G+S ++VTYNT+
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
I GLCR+ ++ E+ + + +M +DG+ P+ TYNT+IDG+C G + A + +D +G
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 133/261 (50%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G++++A D+F M + +Y ++N L + G Q ++Y +M++ GV ++YTY
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ C+ GR A ++ M G S N V Y T++ G + A ++ D+M
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ P++ T+N L+ G C G + ++ L + RG+SP+L TYNI + G CR+G
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + + G+ P VTY +I R + ++ + M GL PD TY+ +I
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 285 GYCKKGMVQDANRILKDAVFK 305
G+C KG + +A+R+ K V K
Sbjct: 452 GFCIKGQMNEASRLFKSMVEK 472
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 128/251 (50%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+++++ D+ + + P+V Y +++ + G +A ++ M G+ ++ TY
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
T+ I + G + M G N Y V+ + G A ++FDEM E
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + ++ T+N L+ GLC++ + E+ K+++++ G++PNL TYN I G C G L +
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+ + G+SP +VTYN ++ G CRK + + + +M G++P + TY +ID
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 285 GYCKKGMVQDA 295
+ + ++ A
Sbjct: 417 TFARSDNMEKA 427
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 120/230 (52%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K+ EA V ++M P++ +YN +++ G +A + +K +G+ + TY
Sbjct: 318 KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I + FCR G A ++++ M G + V Y ++ F + + A +L M E
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
L PDV T++ L+HG C KG + E+ +L ++++ PN YN I G C+EG+ RA
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
+ L + + ++P+V +Y +I LC++ + E+E + KM++ G+ P
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 133/262 (50%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+ ++A VF+ M ++ +YN ++ L N+A+KV +MK G+ ++ TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I FC G+ AL L R++ G S + V Y +V+GF GD A ++ EM E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + P T+ L+ + + ++ +L + + G+ P++ TY++ I G C +G ++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A S+ + P+ V YNT+I G C++ + + L +M L P+ +Y +I+
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 285 GYCKKGMVQDANRILKDAVFKG 306
CK+ ++A R+++ + G
Sbjct: 522 VLCKERKSKEAERLVEKMIDSG 543
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 88/163 (53%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R G A + + M+ +PS +Y +++ +A ++ + M++ G+ DV+
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVH 444
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
TY++ I FC G+ + A RL ++M C N V Y T++ G+ + G A +L EM
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
E+ L P+VA++ ++ LCK+ E+E+L+ K++ G+ P+
Sbjct: 505 EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 10 EFNQMENLLSEMRAT-LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
+ N+ ++ +M++ + NL+ Y + + GK+ +A+ + + PS+ +
Sbjct: 318 KLNEANKVVDQMKSDGINPNLI--TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN +++ G + A K+ M+++G+ TYTI I +F R+ A++L +M
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G + Y ++ GF G + A LF M+E++ P+ +N ++ G CK+G
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
+ KLL ++ ++ ++PN+ +Y I+ LC+E A + + G+ P
Sbjct: 496 RALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 143/256 (55%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+ QEAV + + MD + P+V YN ++N L + N A +V+ M+ KG+ +D TY
Sbjct: 164 RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I +GR A RLLR+M N + + ++ F + G+ AR L+ EM+ R
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
S+ P+V T+N L++G C G + +++ + + ++ +G P++ TYN I G C+ ++
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ ++ +G+ D TYNT+I G C+ ++ +++ ++MV+ G+ PD TYN ++D
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 286 YCKKGMVQDANRILKD 301
C G ++ A +++D
Sbjct: 404 LCNNGKIEKALVMVED 419
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 141/263 (53%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+ +A + M +P+V + A+++ V+ G +A +Y M + V +V+TY
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I FC G A + M GC + V Y T++ GF + + +LF EM
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ L D T+N L+HG C+ G + ++K+ N+++ GVSP++ TYNI + LC G +++
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+V + + + M D++TYN +I GLCR ++ E+ + G++PD Y T+I
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 285 GYCKKGMVQDANRILKDAVFKGF 307
G C+KG+ ++A+++ + GF
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGF 495
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 153/288 (53%), Gaps = 4/288 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
++ L + + LL +M + ++ N++ + + ++ + G + EA ++++ M
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVI--FFTALIDTFVKEGNLLEARNLYKEMIR 282
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+ P+V +YN+++N G A ++ M KG DV TY I FC++ R
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
++L M+ G +A Y T++ G+ + G ++A+++F+ M++ + PD+ T+N L+
Sbjct: 343 GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
LC G + ++ ++ + K + ++ TYNI IQGLCR L A S++R+G+ P
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN-TIIDGY 286
D + Y T+I GLCRK E+++ +M DG P E Y+ T+ D Y
Sbjct: 463 DAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 119/240 (49%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
PS+ + +++N + F +A + M G +V Y I C+ + AL +
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
M G +AV Y T+++G G A L +M++R + P+V F L+ K
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
+G + E+ L ++++R V PN+FTYN I G C G L A + +G PDVVT
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
YNT+I G C+ RV + + +M GL D FTYNT+I GYC+ G + A ++ V
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 141/309 (45%), Gaps = 35/309 (11%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y E +R+ K +A +F M PS+ + ++ ++ + F+ +Y +M+
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 94 DKGVGSDVYTYTIRIKSFCRTG-----------------RP------------------H 118
+ G+ D+Y++TI I FCR RP
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A+ L+ +M FG N V Y TV+ G + D + A E+F M ++ + D T+N L+
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
GL G ++ +LL ++KR + PN+ + I +EG L A + R +
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
P+V TYN++I G C + +++ MV+ G PD TYNT+I G+CK V+D ++
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 299 LKDAVFKGF 307
+ ++G
Sbjct: 347 FCEMTYQGL 355
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 142/259 (54%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+++EA + ++M C+PS +Y ++ L + G ++A ++ M +G +V+TY
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
T+ I CR G+ A + R M + + Y ++ G+ + G A EL M +
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R+ P+V TFN+L+ GLC+ G ++ LL ++L G+SP++ +YN+ I GLCREG ++
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A L S++ + PD +T+ +I C++ + + L M+ G+ DE T T+ID
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 285 GYCKKGMVQDANRILKDAV 303
G CK G +DA IL+ V
Sbjct: 520 GVCKVGKTRDALFILETLV 538
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 137/262 (52%), Gaps = 1/262 (0%)
Query: 47 VQEAVDVFERMDL-YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+++A+ VF+ M C P+ SY+ +++ L E G +A + +M +KG TYT
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
+ IK+ C G A L M GC N Y ++ G G + A + +M++
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P V T+N L++G CK G V + +LL + KR PN+ T+N ++GLCR G +A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
V L + G+SPD+V+YN +I GLCR+ + + + L M ++PD T+ II+
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 286 YCKKGMVQDANRILKDAVFKGF 307
+CK+G A+ L + KG
Sbjct: 486 FCKQGKADVASAFLGLMLRKGI 507
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + Y + G+V A ++ M+ C+P+V ++N +M L G +A + RM
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
D G+ D+ +Y + I CR G + A +LL +M+ F + + + ++ F + G
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D+A ML + + D T L+ G+CK G ++ +L ++K + + N+
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ L + + + LG +++ G+ P VVTY T++ GL R + S L M G
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRIL 299
P+ + Y II+G C+ G V++A ++L
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLL 639
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 138/303 (45%), Gaps = 35/303 (11%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y +++ G + +A ++F+ M C+P+VH+Y +++ L G +A+ V +M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ V TY I +C+ GR A LL M C N + ++ G G
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A L ML+ L PD+ ++N L+ GLC++G + + KLL+ + + P+ T+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCR---------------KSRV 257
I C++G D A FLG + R+G+S D VT T+I G+C+ K R+
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 258 VESEECLH--------------------KMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
+ + L+ K+ GL P TY T++DG + G + + R
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 298 ILK 300
IL+
Sbjct: 603 ILE 605
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
Y I+N L + GY A ++ G D + T + FCR AL++ MS
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 129 V-FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
C+ N+V+Y ++ G E G + A L D+M E+ P T+ L+ LC +G +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
++ L ++++ RG PN+ TY + I GLCR+G ++ A + ++ + P V+TYN +
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
I G C+ RVV + E L M +P+ T+N +++G C+ G A +LK + G
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 130/273 (47%)
Query: 36 EAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK 95
E M R GK +AV + +RM P + SYN +++ L G+ N A+K+ M
Sbjct: 411 ELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCF 470
Query: 96 GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLA 155
+ D T+T I +FC+ G+ A L M G S + V T++ G + G A
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
Query: 156 RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
+ + +++ + + N ++ L K V E +L K+ K G+ P++ TY + G
Sbjct: 531 LFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDG 590
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
L R G + + L + G P+V Y +I GLC+ RV E+E+ L M + G+ P+
Sbjct: 591 LIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650
Query: 276 EFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
TY ++ GY G + A ++ V +G++
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 106/255 (41%), Gaps = 19/255 (7%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + R G + + + E M L C P+V+ Y I+N L +FG +A K+ M
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFY----- 147
+D GV + TYT+ +K + G+ AL +R M G N Y +++ GF
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKG 702
Query: 148 -----EFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC--------KKGFVPESEKLL 194
E D+A D L V + GLC K+G ES L+
Sbjct: 703 IDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLV 762
Query: 195 NKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRK 254
VL+RGV +I ++ C + + + + V + G P ++ VI GL ++
Sbjct: 763 QNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKE 821
Query: 255 SRVVESEECLHKMVN 269
+ E + +++
Sbjct: 822 GDAERARELVMELLT 836
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 19/272 (6%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
KV+E + + +++ PSV +Y +++ L+ G + ++ MK G +VY YT
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYT 620
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I I C+ GR A +LL M G S N V Y +V G+ G D A E M+ER
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Query: 166 SLCPDVATFNKLVHG--LCKKGFVPESEKLLNKVLKRGVSPNLFTYNI------------ 211
+ ++ L+ G L +KG E ++ + R P I
Sbjct: 681 GYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISG 740
Query: 212 ----FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
+ LC+EG D + + +V G+ + + ++ C K + + E + +
Sbjct: 741 LCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLV 799
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+ G P ++ +I G K+G + A ++
Sbjct: 800 LKSGFVPSFKSFCLVIQGLKKEGDAERARELV 831
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 23/265 (8%)
Query: 52 DVFERMDLYNCEPSVHSY-----NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
D+ R ++ C+ S + + N ++ ++V G + AH V + +
Sbjct: 84 DICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVAL-------------- 129
Query: 107 RIKSFCRTGRPHAALRLLRN--MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
IK R + L + VFG N Y +++ + LA + M
Sbjct: 130 -IKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEA 188
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ + +V+ LCK G+ +E ++K+LK G + + G CR L
Sbjct: 189 DGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248
Query: 225 AVVFLGSVSRE-GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
A+ +S+E +P+ V+Y+ +I GLC R+ E+ +M G QP TY +I
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 284 DGYCKKGMVQDANRILKDAVFKGFK 308
C +G++ A + + + +G K
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCK 333
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 134/271 (49%), Gaps = 1/271 (0%)
Query: 29 LLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV 88
L Y + S RFG V+E ++ M P ++++N ++N + GY +A +
Sbjct: 118 LTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQY 177
Query: 89 YMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYE 148
+ G D +TYT I CR AA ++ + M+ GC N V+Y ++ G +E
Sbjct: 178 VTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFE 237
Query: 149 FGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFT 208
D A L +M + + CP+V T+ L+ LC G E+ L ++ + G+ P+
Sbjct: 238 AKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCM 297
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV 268
Y + IQ C LD A L + G+ P+V+TYN +I G C+K+ V ++ L KM+
Sbjct: 298 YTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKML 356
Query: 269 NDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
L PD TYNT+I G C G + A R+L
Sbjct: 357 EQNLVPDLITYNTLIAGQCSSGNLDSAYRLL 387
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + + R +V A VF+ M C + SY ++ L E ++A + ++M
Sbjct: 192 TYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKM 251
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
KD +V TYT+ I + C +G+ A+ L + MS G + Y ++ F
Sbjct: 252 KDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTL 311
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A L + MLE L P+V T+N L+ G CKK V ++ LL+K+L++ + P+L TYN
Sbjct: 312 DEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTL 370
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPD 240
I G C G LD A L + G+ P+
Sbjct: 371 IAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 111 FCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPD 170
FCRT R + + ++ Y +++ FG + + L+ EMLE + PD
Sbjct: 102 FCRTMRKGDSFEIKYKLT-------PKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPD 154
Query: 171 VATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLG 230
+ TFN LV+G CK G+V E+++ + +++ G P+ FTY FI G CR +D A
Sbjct: 155 IYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFK 214
Query: 231 SVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
+++ G + V+Y +I GL ++ E+ L KM +D P+ TY +ID C G
Sbjct: 215 EMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSG 274
Query: 291 MVQDANRILKDAVFKGFK 308
+A + K G K
Sbjct: 275 QKSEAMNLFKQMSESGIK 292
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 145/275 (52%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
A+ + + + GK++EA ++ + M P +Y ++++ + ++A+ + M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
KG G ++ T+ I I +C+ L L R MS+ G + V Y T++ GF E G
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
++A+ELF EM+ R + PD+ ++ L+ GLC G ++ ++ K+ K + ++ YNI
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I G+C +D A S+ +G+ PDV TYN +I GLC+K + E++ KM DG
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
P+ TYN +I + +G + +++++ GF
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 140/259 (54%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GKV +AV + +RM +P+ +Y ++ ++ + G A ++ +M+++ + D Y
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+I I C+ G A L M + G + + Y T++ GF G D +L +M++
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + PDV F+ L+ K+G + E+E+L ++++RG+SP+ TY I G C+E LD+
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A L + +G P++ T+N +I G C+ + + + E KM G+ D TYNT+I
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 285 GYCKKGMVQDANRILKDAV 303
G+C+ G ++ A + ++ V
Sbjct: 431 GFCELGKLEVAKELFQEMV 449
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 140/270 (51%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E Y ++ + G+ A+++ +M+ + Y+ I++ L + G + A ++
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
M+ KG +D+ YT I+ FC GR +LLR+M + + VA+ ++ F + G
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
A EL EM++R + PD T+ L+ G CK+ + ++ +L+ ++ +G PN+ T+N
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I I G C+ +D + +S G+ D VTYNT+I G C ++ ++E +MV+
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
++PD +Y ++DG C G + A I +
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFE 481
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 138/262 (52%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+V EA+++ +RM +P++ + NA++N L G + A + RM + G + TY
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+K C++G+ A+ LLR M +AV Y ++ G + G D A LF+EM
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ D+ + L+ G C G + KLL ++KR ++P++ ++ I +EG L
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + + G+SPD VTY ++I G C+++++ ++ L MV+ G P+ T+N +I+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 285 GYCKKGMVQDANRILKDAVFKG 306
GYCK ++ D + + +G
Sbjct: 396 GYCKANLIDDGLELFRKMSLRG 417
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 135/267 (50%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y +R + G+ + + M P V +++A+++ V+ G +A +++ M
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+G+ D TYT I FC+ + A +L M GC N + ++ G+ + D
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
ELF +M R + D T+N L+ G C+ G + +++L +++ R V P++ +Y I +
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
GLC G ++A+ + + M D+ YN +I G+C S+V ++ + + G++
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILK 300
PD TYN +I G CKKG + +A+ + +
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFR 551
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 121/244 (49%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
EP +++ ++N L G ++A ++ RM + G + T + C G+ A+
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
L+ M G N V Y V+ + G LA EL +M ER + D ++ ++ GLC
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K G + + L N++ +G ++ Y I+G C G D L + + ++PDVV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
++ +I ++ ++ E+EE +M+ G+ PD TY ++IDG+CK+ + AN +L
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 303 VFKG 306
V KG
Sbjct: 379 VSKG 382
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 132/276 (47%), Gaps = 35/276 (12%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y E +RS K +AVD+F+ M P + ++ + +++ ++ + +M
Sbjct: 39 SYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM 98
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ KG+ ++YT +I I CR R +S+ +F+A+ ++ YE
Sbjct: 99 ELKGIAHNLYTLSIMINCCCRC----------RKLSL---AFSAMG--KIIKLGYE---- 139
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
PD TF+ L++GLC +G V E+ +L++++++ G P L T N
Sbjct: 140 ----------------PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNAL 183
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ GLC G + AV+ + + G P+ VTY V+ +C+ + + E L KM +
Sbjct: 184 VNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI 243
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ D Y+ IIDG CK G + +A + + KGFK
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ Y + + + +++F +M L +YN ++ E G A +++ M + V
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
D+ +Y I + C G P AL + + + Y ++ G D A +
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
LF + + + PDV T+N ++ GLCKKG + E++ L K+ + G SPN TYNI I+
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
EG ++ + + R G S D T V+
Sbjct: 574 GEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 149/274 (54%), Gaps = 4/274 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+ VE +R + GK++EA+++ +R+ + P++ YNA+++ L + F++A ++ RM
Sbjct: 337 SLVEGLR---KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
G+ + TY+I I FCR G+ AL L M G + Y +++ G +FGD
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A EM+ + L P V T+ L+ G C KG + ++ +L +++ +G++P+++T+
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ GL R G + AV ++ + P+ VTYN +I G C + + ++ E L +M G+
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
PD ++Y +I G C G +A ++ D + KG
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKG 606
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 147/341 (43%), Gaps = 71/341 (20%)
Query: 38 MRSYGRFGKVQEAVDVFERM-DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG 96
++ Y R +V + V VF+ M + P V + +A+++ LV+F +F A +++ M G
Sbjct: 163 IQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVG 222
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFN--------------------- 135
+ DVY YT I+S C A ++ +M GC N
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 136 --------------AVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGL 181
V YCT+V G + + ++ E+ DEML P A + LV GL
Sbjct: 283 GIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGL 342
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL------------------------- 216
K+G + E+ L+ +V+ GVSPNLF YN I L
Sbjct: 343 RKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPND 402
Query: 217 ----------CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
CR G LD A+ FLG + G+ V YN++I G C+ + +E + +
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
M+N L+P TY +++ GYC KG + A R+ + KG
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 133/265 (50%), Gaps = 3/265 (1%)
Query: 46 KVQEAVDVFERMDLYNC---EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
KVQE E MD C PS + ++++ L + G +A + R+ D GV +++
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
Y I S C+ + H A L M G N V Y ++ F G D A EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
++ L V +N L++G CK G + +E + +++ + + P + TY + G C +G +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
++A+ ++ +G++P + T+ T++ GL R + ++ + ++M ++P+ TYN +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 283 IDGYCKKGMVQDANRILKDAVFKGF 307
I+GYC++G + A LK+ KG
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGI 573
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 145/289 (50%), Gaps = 3/289 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
++ L R+F++ E L M + L N + Y + + R GK+ A+ M
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPN--DVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+ SV+ YN+++N +FG + A M +K + V TYT + +C G+ +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
ALRL M+ G + + + T+++G + G A +LF+EM E ++ P+ T+N ++
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
G C++G + ++ + L ++ ++G+ P+ ++Y I GLC G A VF+ + +
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
+ + Y ++ G CR+ ++ E+ +MV G+ D Y +IDG K
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 149/370 (40%), Gaps = 105/370 (28%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R G +++AV +F M +N +P+ +YN ++ E G ++A + M +KG+ D Y
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 103 TY-----------------------------------TIRIKSFCRTGRPHAALRLLRNM 127
+Y T + FCR G+ AL + + M
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPD----------------- 170
G + V Y ++ G + DR L L EM +R L PD
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 171 ------------------VATFNKLVHGLCKKGFVPESEKLLNKV--------------- 197
T+ +++GLCK GFV E+E L +K+
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 198 --------------------LKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ +G+ N TYN+ I+G CR+G ++ A + + +G+
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
SPD +TY T+I LCR++ V ++ E + M G++PD YNT+I G C G + A
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 298 ILKDAVFKGF 307
+ + + +G
Sbjct: 879 LRNEMLRQGL 888
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
+P Y ++++ + G F +A ++ M ++G + TYT I C+ G + A
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDL--ARELFDEMLERSLCPDVATFNKLVHG 180
L M N V Y + + G+ D+ A EL + +L + L + AT+N L+ G
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAIL-KGLLANTATYNMLIRG 796
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
C++G + E+ +L+ +++ GVSP+ TY I LCR + +A+ S++ +G+ PD
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
V YNT+I G C + ++ E ++M+ GL P+ T T
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 12 NQMENLLSEMR--ATLENNLLEGAYVEAMRSYGRFGKV--QEAVDVFERMDLYNCEPSVH 67
N+ E L S+M+ +++ N + G +++ + G+V Q+AV++ + L +
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTK----GEVDMQKAVELHNAI-LKGLLANTA 788
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+YN ++ G +A ++ RM GV D TYT I CR A+ L +M
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVAT 173
+ G + VAY T++ G G+ A EL +EML + L P+ T
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 146/276 (52%), Gaps = 8/276 (2%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+ + + S GR+ V + ++Y P V ++NA+++ V+ G ++A + Y M
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIY---PDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ + D+ TY++ I C R A + M GC + V Y ++ G+ +
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ +LF EM +R + + T+ L+ G C+ G + +E++ +++ GV PN+ TYN+
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ GLC G +++A+V L + + GM D+VTYN +I G+C+ V ++ + + GL
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
PD +TY T++ G KKG+ ++A DA+F+ K
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRREA-----DALFRKMK 493
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 130/232 (56%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+V EA + +E M + +P + +Y+ ++ L + ++A +++ M KG DV TY
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+I I +C++ + ++L MS G N V Y ++ G+ G ++A E+F M+
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ P++ T+N L+HGLC G + ++ +L + K G+ ++ TYNI I+G+C+ G +
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
A S++ +G+ PD+ TY T++ GL +K E++ KM DG+ P+E
Sbjct: 450 AWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ + + K + ++E+M + ++ + N ++N + A +M G
Sbjct: 88 LSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH 147
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+ T+ + FCR R + AL + M G N V Y T++ G + D A +
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
L + M + + PDV T+N L+ GLC G ++ ++++ + KR + P++FT+N I
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+EG + A F + R + PD+VTY+ +I GLC SR+ E+EE MV+ G PD
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKG 306
TY+ +I+GYCK V+ ++ + +G
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 141/274 (51%), Gaps = 2/274 (0%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y E +R+ RF K+ +++D+F M PS+ ++ +++ + + ++ ++ +M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
G+ ++ T I + FCR + AL L M G + V + +++ GF GDR
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR-GDRV 167
Query: 154 L-ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A +FD+M+ P+V +N ++ GLCK V + LLN++ K G+ P++ TYN
Sbjct: 168 YDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I GLC G A + +++ + PDV T+N +I ++ RV E+EE +M+ L
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
PD TY+ +I G C + +A + V KG
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 130/269 (48%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ + R ++ A+ +M EPS+ ++ +++N A ++ +M G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+V Y I C++ + AL LL M G + V Y ++++G G A
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ M +R + PDV TFN L+ K+G V E+E+ ++++R + P++ TY++ I GLC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
LD A G + +G PDVVTY+ +I G C+ +V + +M G+ +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKG 306
TY +I GYC+ G + A I + VF G
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + Y + KV+ + +F M + +Y ++ G N A +++ RM
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
GV ++ TY + + C G+ AL +L +M G + V Y ++ G + G+
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
A +++ + + L PD+ T+ ++ GL KKG E++ L K+ + G+ PN
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 155/303 (51%), Gaps = 2/303 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLEN-NLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
+L KL R F+ +E+L++++R + E +++ +R+YG G+ + ++ +F R+
Sbjct: 89 ILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPD 148
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK-GVGSDVYTYTIRIKSFCRTGRPH 118
+ + SV S N ++N+L++ F+ H ++ K+ G+ +++T + +K+ C+
Sbjct: 149 FGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIE 208
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
+A ++L + G N V Y T++ G+ GD + A+ + +EML+R PD T+ L+
Sbjct: 209 SAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLM 268
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
G CK G E+ +++ + K + PN TY + I+ LC+E A +
Sbjct: 269 DGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFM 328
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
PD VI LC +V E+ KM+ + PD +T+I CK+G V +A ++
Sbjct: 329 PDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKL 388
Query: 299 LKD 301
+
Sbjct: 389 FDE 391
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 130/295 (44%), Gaps = 36/295 (12%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
++ A V + + P++ +Y I+ V G A +V M D+G D TYT+
Sbjct: 207 IESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTV 266
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
+ +C+ GR A ++ +M N V Y ++ + AR +FDEMLERS
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERS 326
Query: 167 --------------LC---------------------PDVATFNKLVHGLCKKGFVPESE 191
LC PD A + L+H LCK+G V E+
Sbjct: 327 FMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR 386
Query: 192 KLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGL 251
KL ++ ++G P+L TYN I G+C +G L A + P+ TYN +I GL
Sbjct: 387 KLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGL 445
Query: 252 CRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
+ V E L +M+ G P++ T+ + +G K G +DA +I+ AV G
Sbjct: 446 SKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER-S 166
++++ GR +++R+ + FG + + T++ + DL +F E
Sbjct: 127 LRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFG 186
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
+ P++ T N LV LCKK + + K+L+++ G+ PNL TY + G G ++ A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
L + G PD TY ++ G C+ R E+ + M + ++P+E TY +I
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 287 CKKGMVQDANRILKDAVFKGF 307
CK+ +A + + + + F
Sbjct: 307 CKEKKSGEARNMFDEMLERSF 327
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 146/300 (48%), Gaps = 42/300 (14%)
Query: 14 MENLLSEMRATLENNLLEGAYVEAMRSYG-------RFGKVQEAVDVFERMDLYNCEPSV 66
M L E R L++ E + YG + G + A+++ +M+ + + V
Sbjct: 17 MNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHV 76
Query: 67 HSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRN 126
YNAI++ L + G+ A ++ M DKG+ DV TY+ I SFCR+GR A +LLR
Sbjct: 77 VIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR- 135
Query: 127 MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF 186
+M+ER + PDV TF+ L++ L K+G
Sbjct: 136 ----------------------------------DMIERQINPDVVTFSALINALVKEGK 161
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
V E+E++ +L+RG+ P TYN I G C++ L+ A L S++ + SPDVVT++T
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
+I G C+ RV E +M G+ + TY T+I G+C+ G + A +L + G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 122/237 (51%), Gaps = 4/237 (1%)
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAAL 121
C P V ++ +MN L G QA + RM ++G Y I C+ G +AL
Sbjct: 6 CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGDTESAL 61
Query: 122 RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGL 181
LL M + V Y ++ + G A+ LF EM ++ + PDV T++ ++
Sbjct: 62 NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
C+ G ++E+LL +++R ++P++ T++ I L +EG + A G + R G+ P
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
+TYN++I G C++ R+ +++ L M + PD T++T+I+GYCK V + I
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 8/235 (3%)
Query: 2 LQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
L K GHH +NL +EM + + + Y + S+ R G+ +A + M
Sbjct: 86 LCKDGHHI---HAQNLFTEMHDKGIFPDVI---TYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
P V +++A++N LV+ G ++A ++Y M +G+ TY I FC+ R +
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLND 199
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A R+L +M+ CS + V + T++ G+ + D E+F EM R + + T+ L+H
Sbjct: 200 AKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 259
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
G C+ G + ++ LLN ++ GV+PN T+ + LC + L +A L + +
Sbjct: 260 GFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
M+E PDV TF L++GLC +G V ++ L++++++ G P Y I GLC+ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
+ A+ L + + VV YN +I LC+ + ++ +M + G+ PD TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 282 IIDGYCKKGMVQDANRILKDAV 303
+ID +C+ G DA ++L+D +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMI 138
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 137/260 (52%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K+ +A+ +F M PS+ ++ +++ + + F+ + +M++ G+ ++YTY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I I FCR + AL +L M G + V +++ GF A L D+M+E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
PD TF LVHGL + E+ L+ +++ +G P+L TY I GLC+ G D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ L + + + DVV YNT+I GLC+ + ++ + +KM G++PD FTYN +I
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 286 YCKKGMVQDANRILKDAVFK 305
C G DA+R+L D + K
Sbjct: 295 LCNYGRWSDASRLLSDMLEK 314
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 141/275 (51%), Gaps = 6/275 (2%)
Query: 35 VEAMRSYGRFGKVQEAV-DVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM- 92
+ + +YGR+ + D+ E+ N P + +NA+++ V+ G +A K+Y M
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEK----NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K K DV Y IK FC+ R + + R MS G N V Y T++ GF++ D
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A+ +F +M+ + PD+ T+N L+ GLC G V + + + KR + ++ TY
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I+ LC+ G ++ S+S +G+ P+VVTY T++ G CRK E++ +M DG
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
P+ TYNT+I + G + ++K+ GF
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 7/300 (2%)
Query: 16 NLLSEMRATLENNLLEG------AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSY 69
N SE A +E +++G Y + + G+ A+++ +M+ E V Y
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
N I++ L ++ + + A ++ +M+ KG+ DV+TY I C GR A RLL +M
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC-PDVATFNKLVHGLCKKGFVP 188
+ + V + ++ F + G A +L+DEM++ C PDV +N L+ G CK V
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E ++ ++ +RG+ N TY I G + D A + + +G+ PD++TYN ++
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
GLC V + M ++ D TY T+I+ CK G V+D + KG K
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
+ + + + + K + + E+M ++++Y+ +N + A + +M
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
G G + T + FC R A+ L+ M G + V + T+V G ++
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A L + M+ + PD+ T+ +++GLCK+G + LLNK+ K + ++ YN I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
GLC+ +D A + +G+ PDV TYN +I LC R ++ L M+ +
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
PD +N +ID + K+G + +A ++ + V
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 149/288 (51%), Gaps = 1/288 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
++ KL R F+ ++ +L +R E ++ ++ YG+ G V +A+DVF ++ +
Sbjct: 87 LIYKLAKSRNFDAVDQILRLVRYR-NVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSF 145
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+C ++ S N ++N+LV+ G +A + KD + + ++ I IK F AA
Sbjct: 146 DCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAA 205
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
++ M + V Y +++ D A+ L ++M+++ + P+ TF L+ G
Sbjct: 206 CKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKG 265
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
LC KG E++KL+ + RG P L Y I + L + G +D A + LG + + + PD
Sbjct: 266 LCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPD 325
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
VV YN ++ LC + RV E+ L +M G +P+ TY +IDG+C+
Sbjct: 326 VVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCR 373
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%)
Query: 48 QEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIR 107
+ A VF+ M +PSV +YN+++ L +A + M K + + T+ +
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
+K C G + A +L+ +M GC V Y +++ + G D A+ L EM +R +
Sbjct: 263 MKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRI 322
Query: 168 CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVV 227
PDV +N LV+ LC + VPE+ ++L ++ +G PN TY + I G CR D +
Sbjct: 323 KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLN 382
Query: 228 FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
L ++ P T+ ++ GL + + + L M L + ++ C
Sbjct: 383 VLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Query: 288 KK 289
K
Sbjct: 443 IK 444
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 117/252 (46%)
Query: 48 QEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIR 107
+EA+ +F + SY++++ L + F+ ++ ++ + V +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
I+ + + G A+ + ++ F C + T++ + G+ + A+ FD + L
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 168 CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVV 227
P+ +FN L+ G K + K+ +++L+ V P++ TYN I LCR + +A
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 228 FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
L + ++ + P+ VT+ ++ GLC K E+++ + M G +P Y ++
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 288 KKGMVQDANRIL 299
K+G + +A +L
Sbjct: 303 KRGRIDEAKLLL 314
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+ EA + M+ C+P + +Y +M+ L + G ++A + MK + + DV Y
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIY 329
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I + C R A R+L M + GC NA Y ++ GF D D + + ML
Sbjct: 330 NILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLA 389
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
CP ATF +V GL K G + + +L + K+ +S + + LC
Sbjct: 390 SRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 103/225 (45%)
Query: 84 QAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVV 143
+A ++ + ++ G D +Y+ I ++ A ++LR + + ++
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 144 AGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVS 203
+ + G D A ++F ++ + + N L++ L G + +++ + +
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEEC 263
PN ++NI I+G + + A + + P VVTYN++I LCR + +++
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 264 LHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
L M+ ++P+ T+ ++ G C KG +A +++ D ++G K
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCK 288
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
M G+ G++ EA + M +P V YN ++N L +A++V M+ KG
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+ TY + I FCR + L +L M + +VAG + G+ D A
Sbjct: 358 KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACF 417
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKK 184
+ + M +++L + L+ LC K
Sbjct: 418 VLEVMGKKNLSFGSGAWQNLLSDLCIK 444
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 128/239 (53%), Gaps = 3/239 (1%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ EA + E M + +P +YN ++N ++A +++ M K ++ TY
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I FC+ R + L R MS G N V Y T++ GF++ GD D A+ +F +M+
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ D+ T++ L+HGLC G + + + + K + N+F YN I+G+C+ G +
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
A S+S + PDVVTYNT+I GLC K + E+++ KM DG P+ TYNT+I
Sbjct: 522 AWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 141/276 (51%), Gaps = 1/276 (0%)
Query: 31 EGAYVEAMRS-YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVY 89
G Y E +R+ KV +AVD+F M PS+ +N +++ + + F +
Sbjct: 47 SGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG 106
Query: 90 MRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF 149
+M+ G+ D+YTY+I I FCR + AL +L M G + V +++ G+
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 150 GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTY 209
A L D+M+E PD TF L+HGL E+ L++++++RG P+L TY
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
+ GLC+ G +D A+ L + + +VV +NT+I LC+ V + + +M
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
G++P+ TYN++I+ C G DA+R+L + + K
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 131/259 (50%), Gaps = 2/259 (0%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K EAV + ++M C+P + +Y ++N L + G + A + +M+ + ++V +
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I S C+ A+ L M G N V Y +++ +G A L MLE+
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P+V TFN L+ K+G + E+EKL ++++R + P+ TYN+ I G C LD A
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 226 -VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+F VS++ + P++ TYNT+I G C+ RV + E +M GL + TY TII
Sbjct: 383 KQMFKFMVSKDCL-PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 285 GYCKKGMVQDANRILKDAV 303
G+ + G A + K V
Sbjct: 442 GFFQAGDCDSAQMVFKQMV 460
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 157/321 (48%), Gaps = 41/321 (12%)
Query: 16 NLLSEMRAT-LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMN 74
NLL++M A ++ N++ + + S ++ V+ AVD+F M+ P+V +YN+++N
Sbjct: 244 NLLNKMEAARIKANVV--IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 75 ILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSF 134
L +G ++ A ++ M +K + +V T+ I +F + G+ A +L M
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 135 NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL 194
+ + Y ++ GF D A+++F M+ + P++ T+N L++G CK V + +L
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 195 NKVLKRG-----------------------------------VSPNLFTYNIFIQGLCRE 219
++ +RG V ++ TY+I + GLC
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTY 279
G LD A+V + + M ++ YNT+I G+C+ +V E+ + + ++PD TY
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTY 538
Query: 280 NTIIDGYCKKGMVQDANRILK 300
NT+I G C K ++Q+A+ + +
Sbjct: 539 NTMISGLCSKRLLQEADDLFR 559
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 138/270 (51%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ Y ++ +AV + ++M +P ++ +++ L ++A + +M +G
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
D+ TY + C+ G AL LL M N V + T++ ++ ++A +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
LF EM + + P+V T+N L++ LC G ++ +LL+ +L++ ++PN+ T+N I
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+EG L A + + + PD +TYN +I G C +R+ E+++ MV+ P+
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
TYNT+I+G+CK V+D + ++ +G
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 132/265 (49%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
+ R ++ A+ V +M EP + + ++++N + A + +M + G D
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+T+T I + A+ L+ M GC + V Y TVV G + GD DLA L +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+M + +V FN ++ LCK V + L ++ +G+ PN+ TYN I LC G
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
A L ++ + ++P+VVT+N +I ++ ++VE+E+ +M+ + PD TYN
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 281 TIIDGYCKKGMVQDANRILKDAVFK 305
+I+G+C + +A ++ K V K
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSK 392
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 131/256 (51%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + A+++ +M+ + +V +N I++ L ++ + A ++ M+ KG+ +V TY
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I C GR A RLL NM + N V + ++ F++ G A +L +EM++
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
RS+ PD T+N L++G C + E++++ ++ + PN+ TYN I G C+ ++
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
V +S+ G+ + VTY T+I G + ++ +MV++ + D TY+ ++
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 285 GYCKKGMVQDANRILK 300
G C G + A I K
Sbjct: 477 GLCSYGKLDTALVIFK 492
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + + + +V++ V++F M + +Y I+ + G + A V+ +M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
V +D+ TY+I + C G+ AL + + + N Y T++ G + G
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A +LF + S+ PDV T+N ++ GLC K + E++ L K+ + G PN TYN
Sbjct: 520 GEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Query: 213 IQGLCREGALDRA 225
I+ R+ DRA
Sbjct: 577 IRANLRD--CDRA 587
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%)
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
V ++ L ++K P++ +N + + + + + + G+S D+ TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
I CR+S++ + L KM+ G +PD T +++++GYC + DA ++ V G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 307 FK 308
+K
Sbjct: 184 YK 185
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 133/258 (51%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + +G+ G++ + V FE M CEP V +YNA++N +FG + Y M
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K G+ +V +Y+ + +FC+ G A++ +M G N Y +++ + G+
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A L +EML+ + +V T+ L+ GLC + E+E+L K+ GV PNL +YN
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I G + +DRA+ L + G+ PD++ Y T I GLC ++ ++ +++M G+
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 273 QPDEFTYNTIIDGYCKKG 290
+ + Y T++D Y K G
Sbjct: 539 KANSLIYTTLMDAYFKSG 556
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 35/300 (11%)
Query: 44 FGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT 103
G ++EA+ F +M + P S N +++ + G + + + M G V+T
Sbjct: 205 LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFT 264
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
Y I I C+ G AA L M G + V Y +++ GF + G D F+EM
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
+ PDV T+N L++ CK G +P + ++ G+ PN+ +Y+ + C+EG +
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 224 RAVVFLGSVSREGMSP-----------------------------------DVVTYNTVI 248
+A+ F + R G+ P +VVTY +I
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
GLC R+ E+EE KM G+ P+ +YN +I G+ K + A +L + +G K
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 504
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G V+ A +FE M P +YN++++ + G + + MKD DV TY
Sbjct: 276 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I FC+ G+ L R M G N V+Y T+V F + G A + + +M
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
L P+ T+ L+ CK G + ++ +L N++L+ GV N+ TY I GLC +
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A G + G+ P++ +YN +I G + + + E L+++ G++PD Y T I
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 285 GYCKKGMVQDANRILKD 301
G C ++ A ++ +
Sbjct: 516 GLCSLEKIEAAKVVMNE 532
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 116/237 (48%)
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAAL 121
C P ++A+ ++L++ G +A + + +MK V + + F + G+
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 122 RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGL 181
R ++M G Y ++ + GD + AR LF+EM R L PD T+N ++ G
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
K G + ++ ++ P++ TYN I C+ G L + F + G+ P+V
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
V+Y+T++ C++ + ++ + M GL P+E+TY ++ID CK G + DA R+
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 1/262 (0%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+++EA ++F +MD P++ SYNA+++ V+ ++A ++ +K +G+ D+ Y
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I C + AA ++ M G N++ Y T++ +++ G+ L DEM E
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR-GVSPNLFTYNIFIQGLCREGALDR 224
+ V TF L+ GLCK V ++ N++ G+ N + I GLC++ ++
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + ++G+ PD Y +++ G ++ V+E+ KM G++ D Y +++
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691
Query: 285 GYCKKGMVQDANRILKDAVFKG 306
G +Q A L++ + +G
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEG 713
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 36/299 (12%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y + ++ + G +Q+A+ + M P+ ++Y ++++ + G + A ++ M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
GV +V TYT I C R A L M G N +Y ++ GF + +
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLC------------------------------ 182
D A EL +E+ R + PD+ + + GLC
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 183 -----KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE-G 236
K G E LL+++ + + + T+ + I GLC+ + +AV + +S + G
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+ + + +I GLC+ ++V + +MV GL PD Y +++DG K+G V +A
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 20/226 (8%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
SV SY + +IL + A+ V M DV+ ++ C G
Sbjct: 141 SVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG--------- 191
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
VF F+ + + G + A + F +M + P + N L+H K
Sbjct: 192 --FGVFDALFSVLI---------DLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKL 240
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
G + ++ ++ G P +FTYNI I +C+EG ++ A + G+ PD VTY
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
N++I G + R+ ++ +M + +PD TYN +I+ +CK G
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 154/340 (45%), Gaps = 41/340 (12%)
Query: 2 LQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAV-DVFERMD 58
L K GHH + + L SEM + N ++ S+GR+ Q + D+ ER
Sbjct: 306 LCKDGHHSD---AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-- 360
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKV------------------------------ 88
P V ++NA+++ V+ G +A K+
Sbjct: 361 --EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 89 -YMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFY 147
M D DV T+ I +CR R ++LLR +S G N Y T++ GF
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 148 EFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
E + + A++LF EM+ +CPD T N L++G C+ + E+ +L + + +
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
YNI I G+C+ +D A S+ G+ PDV TYN +I G C KS + ++ HKM
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
++G +PD TYNT+I G K G + + ++ + GF
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 142/280 (50%), Gaps = 6/280 (2%)
Query: 30 LEGAYVEAMRSYGRFGKVQ--EAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHK 87
LE EA+ +G + EAV +F++M P V ++N ++N L G +A
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 88 VYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFY 147
+ +M KG+ DV TY + C+ G +AL LL M + V Y ++
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 148 EFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
+ G A+ LF EMLE+ + P+V T+N ++ G C G ++++LL +++R ++P++
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
T+N I +EG L A + + PD VTYN++I G C+ +R +++ M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+ PD T+NTIID YC+ V + ++L++ +G
Sbjct: 428 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 145/296 (48%), Gaps = 17/296 (5%)
Query: 24 TLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFN 83
+L EG ++ F + +A+D F+ M + N ++ + V +
Sbjct: 64 SLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPD 123
Query: 84 QAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVV 143
A +Y +M+ + + ++Y++ I IK FC + +L ++ G + V + T++
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 144 AGF----------------YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
G E G + A LFD+M+E L P V TFN L++GLC +G V
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
E+ L+NK++ +G+ ++ TY + G+C+ G A+ L + + PDVV Y+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
I LC+ +++ +M+ G+ P+ FTYN +IDG+C G DA R+L+D +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 15/269 (5%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMN----------ILVEFGY-----FNQAHKVYM 90
K+ ++ F ++ +P V ++N +++ L FGY F +A ++
Sbjct: 156 KLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFD 215
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
+M + G+ V T+ I C GR A L+ M G + V Y T+V G + G
Sbjct: 216 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
D A L +M E + PDV ++ ++ LCK G +++ L +++L++G++PN+FTYN
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I G C G A L + ++PDV+T+N +I ++ ++ E+E+ +M++
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+ PD TYN++I G+CK DA +
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
I F R RP A+ L R M + N ++ ++ F + + F ++ +
Sbjct: 113 IGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF 172
Query: 168 CPDVATFNKLVHGLC----------------KKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
PDV TFN L+HGLC + GF+ E+ L +++++ G++P + T+N
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNT 231
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
I GLC EG + A + + +G+ DVVTY T++ G+C+ + L KM
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
++PD Y+ IID CK G DA + + + KG
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 144 AGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVS 203
+G + F D A + FD M+ NK++ + + L K+ R +
Sbjct: 79 SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRV------ 257
N++++NI I+ C L ++ G +++ G PDVVT+NT++ GLC + R+
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 258 ---------VESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+E+ +MV GL P T+NT+I+G C +G V +A ++ V KG
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 156/297 (52%), Gaps = 3/297 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERM-DL 59
+L++L R N + ++ +R+ E E + +++YG+ +A+DVF+RM ++
Sbjct: 49 ILRRLSETRMVNHVSRIVELIRSQ-ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREI 107
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+ CEP++ SYN ++N VE + + ++ + GV ++ TY + IK C+
Sbjct: 108 FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEK 167
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A L M G + +Y TV+ + G D A ELFDEM ER + PDV +N L+
Sbjct: 168 ARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227
Query: 180 GLCKKGFVPESEKLLNKVLK-RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
G K+ + +L +++L+ V PN+ T+NI I GL + G +D + + +
Sbjct: 228 GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE 287
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
D+ TY+++I GLC V ++E +++ D TYNT++ G+C+ G ++++
Sbjct: 288 KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES 344
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 144/291 (49%), Gaps = 9/291 (3%)
Query: 11 FNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYN 70
FN+++ + + N +L G + R GK++E+++++ M+ N ++ SYN
Sbjct: 313 FNELDERKASIDVVTYNTMLGG--------FCRCGKIKESLELWRIMEHKN-SVNIVSYN 363
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
++ L+E G ++A ++ M KG +D TY I I C G + AL +++ +
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
G + AY +++ + + A L EM + + + N L+ GL + + E+
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICG 250
L ++ K G P + +YNI I GLC+ G A F+ + G PD+ TY+ ++CG
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 251 LCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
LCR ++ + E H+ + GL+ D +N +I G C G + DA ++ +
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 136/264 (51%), Gaps = 1/264 (0%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+V + + ++ERM E +++Y+++++ L + G ++A V+ + ++ DV TY
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTY 328
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ FCR G+ +L L R M S N V+Y ++ G E G D A ++ M
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ D T+ +HGLC G+V ++ ++ +V G +++ Y I LC++ L+
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + +S+ G+ + N +I GL R SR+ E+ L +M +G +P +YN +I
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Query: 285 GYCKKGMVQDANRILKDAVFKGFK 308
G CK G +A+ +K+ + G+K
Sbjct: 508 GLCKAGKFGEASAFVKEMLENGWK 531
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY + + +++EA ++ + M + E + H NA++ L+ +A M
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
G V +Y I I C+ G+ A ++ M G + Y ++ G
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
DLA EL+ + L+ L DV N L+HGLC G + ++ ++ + R + NL TYN
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
++G + G +RA V G + + G+ PD+++YNT++ GLC V + E N G+
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Query: 273 QPDEFTYNTII 283
P +T+N ++
Sbjct: 671 FPTVYTWNILV 681
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ EA ++ M +Y ++ L GY N+A V ++ G DVY Y
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I C+ R A L++ MS G N+ ++ G A EM +
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
P V ++N L+ GLCK G E+ + ++L+ G P+L TY+I + GLCR+ +D
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+ + G+ DV+ +N +I GLC ++ ++ + M + + TYNT+++
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 285 GYCKKGMVQDANR 297
G+ K G D+NR
Sbjct: 613 GFFKVG---DSNR 622
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 7/277 (2%)
Query: 33 AYVEAMRSYGRF-------GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQA 85
Y +YG F G V +A+ V + ++ V++Y +I++ L + +A
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 86 HKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAG 145
+ M GV + + I R R A LR M GC V+Y ++ G
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 146 FYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
+ G A EMLE PD+ T++ L+ GLC+ + + +L ++ L+ G+ +
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568
Query: 206 LFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLH 265
+ +NI I GLC G LD A+ + ++ + ++VTYNT++ G + +
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWG 628
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
M GLQPD +YNTI+ G C V A DA
Sbjct: 629 YMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDA 665
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 87/174 (50%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ GK EA + M +P + +Y+ ++ L + A +++ + G+ +DV
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM 570
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
+ I I C G+ A+ ++ NM C+ N V Y T++ GF++ GD + A ++ M
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
+ L PD+ ++N ++ GLC V + + + G+ P ++T+NI ++ +
Sbjct: 631 YKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%)
Query: 201 GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
G P + +YN + + G++P++ TYN +I C+K ++
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 261 EECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
L M +G +PD F+Y+T+I+ K G + DA + + +G
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 154/340 (45%), Gaps = 41/340 (12%)
Query: 2 LQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAV-DVFERMD 58
L K GHH + + L SEM + N ++ S+GR+ Q + D+ ER
Sbjct: 306 LCKDGHHSD---AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-- 360
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKV------------------------------ 88
P V ++NA+++ V+ G +A K+
Sbjct: 361 --EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 89 -YMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFY 147
M D DV T+ I +CR R ++LLR +S G N Y T++ GF
Sbjct: 419 DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 148 EFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
E + + A++LF EM+ +CPD T N L++G C+ + E+ +L + + +
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
YNI I G+C+ +D A S+ G+ PDV TYN +I G C KS + ++ HKM
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
++G +PD TYNT+I G K G + + ++ + GF
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 142/280 (50%), Gaps = 6/280 (2%)
Query: 30 LEGAYVEAMRSYGRFGKVQ--EAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHK 87
LE EA+ +G + EAV +F++M P V ++N ++N L G +A
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 88 VYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFY 147
+ +M KG+ DV TY + C+ G +AL LL M + V Y ++
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 148 EFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
+ G A+ LF EMLE+ + P+V T+N ++ G C G ++++LL +++R ++P++
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
T+N I +EG L A + + PD VTYN++I G C+ +R +++ M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+ PD T+NTIID YC+ V + ++L++ +G
Sbjct: 428 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 145/296 (48%), Gaps = 17/296 (5%)
Query: 24 TLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFN 83
+L EG ++ F + +A+D F+ M + N ++ + V +
Sbjct: 64 SLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPD 123
Query: 84 QAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVV 143
A +Y +M+ + + ++Y++ I IK FC + +L ++ G + V + T++
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 144 AGF----------------YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
G E G + A LFD+M+E L P V TFN L++GLC +G V
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
E+ L+NK++ +G+ ++ TY + G+C+ G A+ L + + PDVV Y+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
I LC+ +++ +M+ G+ P+ FTYN +IDG+C G DA R+L+D +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 15/269 (5%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMN----------ILVEFGY-----FNQAHKVYM 90
K+ ++ F ++ +P V ++N +++ L FGY F +A ++
Sbjct: 156 KLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFD 215
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
+M + G+ V T+ I C GR A L+ M G + V Y T+V G + G
Sbjct: 216 QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
D A L +M E + PDV ++ ++ LCK G +++ L +++L++G++PN+FTYN
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I G C G A L + ++PDV+T+N +I ++ ++ E+E+ +M++
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+ PD TYN++I G+CK DA +
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
I F R RP A+ L R M + N ++ ++ F + + F ++ +
Sbjct: 113 IGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF 172
Query: 168 CPDVATFNKLVHGLC----------------KKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
PDV TFN L+HGLC + GF+ E+ L +++++ G++P + T+N
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNT 231
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
I GLC EG + A + + +G+ DVVTY T++ G+C+ + L KM
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
++PD Y+ IID CK G DA + + + KG
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y R +V E + + + + +YN +++ E N A ++ M GV D
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
T I + FC + AL L + + + VAY ++ G + D A +LF
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+ + PDV T+N ++ G C K + ++ L +K+ G P+ TYN I+G + G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKS 255
+D+++ + + G S D T +CR S
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVS 656
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 144 AGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVS 203
+G + F D A + FD M+ NK++ + + L K+ R +
Sbjct: 79 SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRV------ 257
N++++NI I+ C L ++ G +++ G PDVVT+NT++ GLC + R+
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 258 ---------VESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+E+ +MV GL P T+NT+I+G C +G V +A ++ V KG
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 1/270 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R GK ++A+++ M + CEP + +YN ++ + N+A +++ +K V
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 98 GS-DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
S DV TYT I +C+ G+ A LL +M G V + +V G+ + G+ A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
E+ +M+ PDV TF L+ G C+ G V + +L ++ RG+ PN FTY+I I L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
C E L +A LG ++ + + P YN VI G C+ +V E+ + +M +PD+
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
T+ +I G+C KG + +A I V G
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 146/311 (46%), Gaps = 41/311 (13%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
NN L G V S+ GK+ A + + + E N+++N LV+ A
Sbjct: 137 NNRLLGFLVS---SFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAM 191
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
K++ +D T+ I I+ C G+ AL LL MS FGC + V Y T++ GF
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF 251
Query: 147 YEFGDRDLARELFDEMLERSLC-PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
+ + + A E+F ++ S+C PDV T+ ++ G CK G + E+ LL+ +L+ G+ P
Sbjct: 252 CKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Query: 206 LFTYNI-----------------------------------FIQGLCREGALDRAVVFLG 230
T+N+ I G CR G + +
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 231 SVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
++ GM P+ TY+ +I LC ++R++++ E L ++ + + P F YN +IDG+CK G
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 291 MVQDANRILKD 301
V +AN I+++
Sbjct: 432 KVNEANVIVEE 442
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 5/202 (2%)
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
+TY + +S C+ G A ++ M G S N +V+ F E G A L +
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
E C V N L++ L K V ++ KL ++ L+ + T+NI I+GLC G
Sbjct: 164 SFEVEGCCMVV--NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG--LQPDEFTY 279
++A+ LG +S G PD+VTYNT+I G C+ + + ++ E + K V G PD TY
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE-MFKDVKSGSVCSPDVVTY 280
Query: 280 NTIIDGYCKKGMVQDANRILKD 301
++I GYCK G +++A+ +L D
Sbjct: 281 TSMISGYCKAGKMREASSLLDD 302
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 1/270 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R GK ++A+++ M + CEP + +YN ++ + N+A +++ +K V
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 98 GS-DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
S DV TYT I +C+ G+ A LL +M G V + +V G+ + G+ A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
E+ +M+ PDV TF L+ G C+ G V + +L ++ RG+ PN FTY+I I L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
C E L +A LG ++ + + P YN VI G C+ +V E+ + +M +PD+
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
T+ +I G+C KG + +A I V G
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 146/311 (46%), Gaps = 41/311 (13%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
NN L G V S+ GK+ A + + + E N+++N LV+ A
Sbjct: 137 NNRLLGFLVS---SFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAM 191
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
K++ +D T+ I I+ C G+ AL LL MS FGC + V Y T++ GF
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGF 251
Query: 147 YEFGDRDLARELFDEMLERSLC-PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
+ + + A E+F ++ S+C PDV T+ ++ G CK G + E+ LL+ +L+ G+ P
Sbjct: 252 CKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Query: 206 LFTYNI-----------------------------------FIQGLCREGALDRAVVFLG 230
T+N+ I G CR G + +
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 231 SVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
++ GM P+ TY+ +I LC ++R++++ E L ++ + + P F YN +IDG+CK G
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 291 MVQDANRILKD 301
V +AN I+++
Sbjct: 432 KVNEANVIVEE 442
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 5/202 (2%)
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
+TY + +S C+ G A ++ M G S N +V+ F E G A L +
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
E C V N L++ L K V ++ KL ++ L+ + T+NI I+GLC G
Sbjct: 164 SFEVEGCCMVV--NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG--LQPDEFTY 279
++A+ LG +S G PD+VTYNT+I G C+ + + ++ E + K V G PD TY
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE-MFKDVKSGSVCSPDVVTY 280
Query: 280 NTIIDGYCKKGMVQDANRILKD 301
++I GYCK G +++A+ +L D
Sbjct: 281 TSMISGYCKAGKMREASSLLDD 302
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 39/294 (13%)
Query: 53 VFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFC 112
V++ M +P+V ++N ++N L + G N+A V MK G +V +Y I +C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 113 R---TGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
+ G+ + A +L+ M S N + ++ GF++ + + ++F EML++ + P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
+V ++N L++GLC G + E+ + +K++ GV PNL TYN I G C+ L A+
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 230 GSVS-----------------------------------REGMSPDVVTYNTVICGLCRK 254
GSV REG+ PDV TYN +I GLCR
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 255 SRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ +++ ++ + GL PD T++ +++GYC+KG + A +LK+ G K
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 131/259 (50%), Gaps = 3/259 (1%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
+Y + + + F+R Y + S S +M L++ VY M + +
Sbjct: 162 AYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQP 221
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD---LAR 156
+V+T+ + I + C+TG+ + A ++ +M V+GCS N V+Y T++ G+ + G A
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
+ EM+E + P++ TFN L+ G K +P S K+ ++L + V PN+ +YN I GL
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
C G + A+ + G+ P+++TYN +I G C+ + E+ + + G P
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401
Query: 277 FTYNTIIDGYCKKGMVQDA 295
YN +ID YCK G + D
Sbjct: 402 RMYNMLIDAYCKLGKIDDG 420
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 141/259 (54%), Gaps = 2/259 (0%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
++ VF+ M + +P+V SYN+++N L G ++A + +M GV ++ TY I
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
FC+ AL + ++ G Y ++ + + G D L +EM + P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
DV T+N L+ GLC+ G + ++KL +++ +G+ P+L T++I ++G CR+G +A + L
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG-LQPDEFTYNTIIDGYCK 288
+S+ G+ P +TYN V+ G C++ + + +M + L+ + +YN ++ GY +
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 289 KGMVQDANRILKDAVFKGF 307
KG ++DAN +L + + KG
Sbjct: 554 KGKLEDANMLLNEMLEKGL 572
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 132/251 (52%), Gaps = 2/251 (0%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ EA+ + ++M +P++ +YNA++N + +A ++ +K +G Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I ++C+ G+ L M G + Y ++AG G+ + A++LFD++
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ L PD+ TF+ L+ G C+KG ++ LL ++ K G+ P TYNI ++G C+EG L
Sbjct: 465 KGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 225 AVVFLGSVSRE-GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
A + +E + +V +YN ++ G +K ++ ++ L++M+ GL P+ TY +
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVK 583
Query: 284 DGYCKKGMVQD 294
+ +G V D
Sbjct: 584 EEMVDQGFVPD 594
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
L+ L K+ + E + ++++R + PN+FT+N+ I LC+ G +++A + + G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 237 MSPDVVTYNTVICGLCR---KSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQ 293
SP+VV+YNT+I G C+ ++ +++ L +MV + + P+ T+N +IDG+ K +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 294 DANRILKDAVFKGFK 308
+ ++ K+ + + K
Sbjct: 314 GSMKVFKEMLDQDVK 328
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 37/188 (19%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
+Y + GK+ + + E M+ P V +YN ++ L G A K++ ++ KG+
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-P 468
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCS-------------------------- 133
D+ T+ I ++ +CR G A LL+ MS G
Sbjct: 469 DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMR 528
Query: 134 ----------FNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
N +Y ++ G+ + G + A L +EMLE+ L P+ T+ + +
Sbjct: 529 TQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVD 588
Query: 184 KGFVPESE 191
+GFVP+ E
Sbjct: 589 QGFVPDIE 596
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 32/295 (10%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+V +A+D+ +M+ P V YN I++ + G N A +++ RM+ GV +D TY
Sbjct: 154 RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN 213
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
+ C +GR A RL+R+M + N + + V+ F + G A +L++EM R
Sbjct: 214 SLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ PDV T+N L++GLC G V E++++L+ ++ +G P++ TYN I G C+ +D
Sbjct: 274 CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEG 333
Query: 226 VVFLGSVSREGMSPDVVTYNTVI--------------------------------CGLCR 253
+++ G+ D +TYNT+I GLC
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCM 393
Query: 254 KSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
RV ++ M ++ D TYN +I G CK G V+DA + + KG K
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 130/258 (50%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
+ +F M++ ++SYN ++N L F A V +M G DV T + I
Sbjct: 88 VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
FC+ R A+ L+ M G + V Y T++ G + G + A ELFD M +
Sbjct: 148 GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRA 207
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
D T+N LV GLC G ++ +L+ ++ R + PN+ T+ I +EG A+
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
++R + PDV TYN++I GLC RV E+++ L MV G PD TYNT+I+G+CK
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 290 GMVQDANRILKDAVFKGF 307
V + ++ ++ +G
Sbjct: 328 KRVDEGTKLFREMAQRGL 345
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 136/254 (53%), Gaps = 6/254 (2%)
Query: 21 MRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFG 80
MR + N + A ++ G+F EA+ ++E M +P V +YN+++N L G
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKF---SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 81 YFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYC 140
++A ++ M KG DV TY I FC++ R +L R M+ G + + Y
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 141 TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR 200
T++ G+++ G D A+E+F M R P++ T++ L++GLC V ++ L + K
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 201 GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
+ ++ TYNI I G+C+ G ++ A S+S +G+ PDVV+Y T+I G CRK + +S
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Query: 261 EECLHKMVNDGLQP 274
+ KM DGL P
Sbjct: 471 DLLYRKMQEDGLLP 484
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 145/279 (51%), Gaps = 11/279 (3%)
Query: 11 FNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYN 70
F++ME A N+L+ G G+ +A + M + + P+V ++
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCS--------GRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
A++++ V+ G F++A K+Y M + V DV+TY I C GR A ++L M
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
GC + V Y T++ GF + D +LF EM +R L D T+N ++ G + G +
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICG 250
+++ +++ R PN+ TY+I + GLC +++A+V ++ + + D+ TYN VI G
Sbjct: 369 QEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 251 LCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
+C+ V ++ + + GL+PD +Y T+I G+C+K
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 125/250 (50%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
A+ V +M + EP V + ++++N + A + +M++ G DV Y I
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
C+ G + A+ L M G +AV Y ++VAG G A L +M+ R + P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
+V TF ++ K+G E+ KL ++ +R V P++FTYN I GLC G +D A L
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
+ +G PDVVTYNT+I G C+ RV E + +M GL D TYNTII GY +
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 290 GMVQDANRIL 299
G A I
Sbjct: 363 GRPDAAQEIF 372
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%)
Query: 137 VAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNK 196
V + V++ + + DL LF M + D+ ++N +++ LC+ + ++ K
Sbjct: 70 VDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 129
Query: 197 VLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSR 256
++K G P++ T + I G C+ + A+ + + G PDVV YNT+I G C+
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 257 VVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
V ++ E +M DG++ D TYN+++ G C G DA R+++D V +
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E L K+++ P++ ++ + + + D + + G+ D+ +YN VI
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
LCR SR V + + KM+ G +PD T +++I+G+C+ V DA ++ GF+
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 146/297 (49%), Gaps = 35/297 (11%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G +++ + ++M+ P++ +YN +++ + G F A ++ MK KGV +DV TY
Sbjct: 247 GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY 306
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I CR+ R LLR+M N V Y T++ GF G +A +L +EML
Sbjct: 307 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF------------ 212
L P+ TFN L+ G +G E+ K+ + +G++P+ +Y +
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426
Query: 213 -----------------------IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
I GLC+ G LD AVV L +S++G+ PD+VTY+ +I
Sbjct: 427 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
G C+ R ++E + ++ GL P+ Y+T+I C+ G +++A RI + + +G
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 124/251 (49%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R Y R G +Q+++++F M LY PSV++ NAI+ +V+ G M + +
Sbjct: 170 IRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI 229
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
DV T+ I I C G + L++ M G + V Y TV+ + + G A E
Sbjct: 230 CPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 289
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
L D M + + DV T+N L+H LC+ + + LL + KR + PN TYN I G
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
EG + A L + G+SP+ VT+N +I G + E+ + + M GL P E
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409
Query: 278 TYNTIIDGYCK 288
+Y ++DG CK
Sbjct: 410 SYGVLLDGLCK 420
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 99 SDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAY-CTVVAGFYEFGDRDLARE 157
S+ Y I I+ + R G +L + R M ++G FN Y C + G D++
Sbjct: 161 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYG--FNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 158 LF-DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
F EML+R +CPDVATFN L++ LC +G +S L+ K+ K G +P + TYN +
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
C++G A+ L + +G+ DV TYN +I LCR +R+ + L M + P+E
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
TYNT+I+G+ +G V A+++L + + G
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGL 369
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 143/289 (49%), Gaps = 5/289 (1%)
Query: 15 ENLLSEMRA--TLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAI 72
LL+EM + N++ A ++ S G F +EA+ +F M+ PS SY +
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNF---KEALKMFYMMEAKGLTPSEVSYGVL 414
Query: 73 MNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGC 132
++ L + F+ A YMRMK GV TYT I C+ G A+ LL MS G
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474
Query: 133 SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEK 192
+ V Y ++ GF + G A+E+ + L P+ ++ L++ C+ G + E+ +
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 534
Query: 193 LLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLC 252
+ ++ G + + FT+N+ + LC+ G + A F+ ++ +G+ P+ V+++ +I G
Sbjct: 535 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 594
Query: 253 RKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+++ +M G P FTY +++ G CK G +++A + LK
Sbjct: 595 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 129/260 (49%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E Y + + GKV A + M + P+ ++NA+++ + G F +A K++
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
M+ KG+ +Y + + C+ A M G + Y ++ G + G
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
D A L +EM + + PD+ T++ L++G CK G +++++ ++ + G+SPN Y+
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I CR G L A+ ++ EG + D T+N ++ LC+ +V E+EE + M +D
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 271 GLQPDEFTYNTIIDGYCKKG 290
G+ P+ +++ +I+GY G
Sbjct: 578 GILPNTVSFDCLINGYGNSG 597
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 35/303 (11%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + Y + G+ + A+++ + M + V +YN +++ L + + + M
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCS-----FNA----------- 136
+ + + + TY I F G+ A +LL M FG S FNA
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389
Query: 137 -------------------VAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
V+Y ++ G + + DLAR + M +C T+ +
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ GLCK GF+ E+ LLN++ K G+ P++ TY+ I G C+ G A + + R G+
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
SP+ + Y+T+I CR + E+ M+ +G D FT+N ++ CK G V +A
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 298 ILK 300
++
Sbjct: 570 FMR 572
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 134/305 (43%), Gaps = 36/305 (11%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + + + G+ + A ++ R+ P+ Y+ ++ G +A ++Y M
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+G D +T+ + + S C+ G+ A +R M+ G N V++ ++ G+ G+
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A +FDEM + P T+ L+ GLCK G + E+EK L + + + YN
Sbjct: 600 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVV-------ESE---- 261
+ +C+ G L +AV G + + + PD TY ++I GLCRK + V E+E
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 719
Query: 262 --------ECL-----------------HKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
C +M N G PD T N +IDGY + G ++ N
Sbjct: 720 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 297 RILKD 301
+L +
Sbjct: 780 DLLPE 784
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 23/301 (7%)
Query: 2 LQKLGHHREFNQMENLLSEMRATLENNLLEGAYV-EAMRSYGRFGKVQEAVDVFERMDLY 60
+ K+GHH F +LL L +G ++ EA + V AVD
Sbjct: 609 MTKVGHHPTFFTYGSLL--------KGLCKGGHLREAEKFLKSLHAVPAAVDTV------ 654
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
YN ++ + + G +A ++ M + + D YTYT I CR G+ A
Sbjct: 655 -------MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 707
Query: 121 LRLLRNMSVFGCSF-NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
+ + G N V Y V G ++ G ++M PD+ T N ++
Sbjct: 708 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
G + G + ++ LL ++ + PNL TYNI + G + + + + S+ G+ P
Sbjct: 768 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILP 827
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
D +T ++++ G+C + + + L + G++ D +T+N +I C G + A ++
Sbjct: 828 DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV 887
Query: 300 K 300
K
Sbjct: 888 K 888
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 1/242 (0%)
Query: 67 HSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRN 126
+++N +++ G N A + M G+ D T + R R + +L
Sbjct: 865 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 924
Query: 127 MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF 186
MS G S + Y ++ G GD A + +EM+ +CP + +V L K G
Sbjct: 925 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 984
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
E+ LL +LK + P + ++ + C+ G + A+ +S G+ D+V+YN
Sbjct: 985 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1044
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG-YCKKGMVQDANRILKDAVFK 305
+I GLC K + + E +M DG + TY +I G ++ A+ ILKD + +
Sbjct: 1045 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLAR 1104
Query: 306 GF 307
GF
Sbjct: 1105 GF 1106
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 104/235 (44%)
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
N P+ Y ++ + + G + +M + G D+ T I + R G+
Sbjct: 719 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
LL M N Y ++ G+ + D + L+ ++ + PD T + LV G
Sbjct: 779 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
+C+ + K+L + RGV + +T+N+ I C G ++ A + ++ G+S D
Sbjct: 839 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
T + ++ L R R ES LH+M G+ P+ Y +I+G C+ G ++ A
Sbjct: 899 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 953
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 133/330 (40%), Gaps = 43/330 (13%)
Query: 13 QMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAI 72
QM+NL N +++G Y R GK+++ D+ M N P++ +YN +
Sbjct: 749 QMDNLGHTPDIVTTNAMIDG--------YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 73 MNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGC 132
++ + + + +Y + G+ D T + C + L++L+ G
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860
Query: 133 SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEK 192
+ + +++ G+ + A +L M + D T + +V L + ES
Sbjct: 861 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 920
Query: 193 LLNKVLKRGVSPNLFTYNIFIQGLCREGAL------------------------------ 222
+L+++ K+G+SP Y I GLCR G +
Sbjct: 921 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 980
Query: 223 -----DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
D A + L + + + P + ++ T++ C+ V+E+ E M N GL+ D
Sbjct: 981 KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1040
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+YN +I G C KG + A + ++ GF
Sbjct: 1041 SYNVLITGLCAKGDMALAFELYEEMKGDGF 1070
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 120/276 (43%), Gaps = 3/276 (1%)
Query: 25 LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQ 84
L N ++ +V+ M G++ + + E+MD P + + NA+++ G +
Sbjct: 721 LPNKVMYTCFVDGMFKAGQW---KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 777
Query: 85 AHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA 144
+ + M ++ G ++ TY I + + + + L R++ + G + + ++V
Sbjct: 778 TNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 837
Query: 145 GFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP 204
G E ++ ++ + R + D TFN L+ C G + + L+ + G+S
Sbjct: 838 GICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISL 897
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL 264
+ T + + L R + + L +S++G+SP+ Y +I GLCR + +
Sbjct: 898 DKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 957
Query: 265 HKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+M+ + P + ++ K G +A +L+
Sbjct: 958 EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 993
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYN-CEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y+ + R G ++ A V E M + C P+V + +A++ L + G ++A + M
Sbjct: 937 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV-AESAMVRALAKCGKADEATLLLRFM 995
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ + ++T + C+ G AL L MS G + V+Y ++ G GD
Sbjct: 996 LKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1055
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHG-LCKKGFVPESEKLLNKVLKRG 201
LA EL++EM + T+ L+ G L ++ ++ +L +L RG
Sbjct: 1056 ALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1105
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 134/261 (51%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K EAV + +RM C+P + +Y A++N L + G + A + +M+ + ++V Y+
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I S C+ AL L M G N + Y ++++ +G A L +M+ER
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P++ TF+ L+ KKG + ++EKL +++KR + PN+FTY+ I G C L A
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
L + R+ P+VVTYNT+I G C+ RV + E +M GL + TY T+I G
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 286 YCKKGMVQDANRILKDAVFKG 306
+ + +A + K V G
Sbjct: 438 FFQARDCDNAQMVFKQMVSVG 458
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 132/259 (50%), Gaps = 7/259 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAV-DVFERM 57
++ L +R + NL +EM + N + + + + +YGR+ + D+ ER
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER- 317
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
P++ +++A+++ V+ G +A K+Y M + + +++TY+ I FC R
Sbjct: 318 ---KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
A ++L M C N V Y T++ GF + D ELF EM +R L + T+ L
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+HG + ++ + +++ GV PN+ TYNI + GLC+ G L +A+V + R M
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 238 SPDVVTYNTVICGLCRKSR 256
PD+ TYN +I G+C+ +
Sbjct: 495 EPDIYTYNIMIEGMCKAGK 513
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 132/262 (50%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
++ +AV + ++M +P ++ +++ L ++A + RM +G D+ TY
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
+ C+ G AL LL M N V Y TV+ ++ D A LF EM +
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P+V T++ L+ LC G ++ +LL+ +++R ++PNL T++ I ++G L +A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + + P++ TY+++I G C R+ E+++ L M+ P+ TYNT+I+G
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 286 YCKKGMVQDANRILKDAVFKGF 307
+CK V + ++ +G
Sbjct: 403 FCKAKRVDKGMELFREMSQRGL 424
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 140/281 (49%), Gaps = 35/281 (12%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G A+++ +M+ E +V Y+ +++ L ++ + + A ++ M++KGV +V TY
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I C GR A RLL +M + N V + ++ F + G A +L++EM++
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
RS+ P++ T++ L++G C + E++++L ++++ PN+ TYN I G C+ +D+
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 225 AVVFLGSVSREGM-----------------------------------SPDVVTYNTVIC 249
+ +S+ G+ P+++TYN ++
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
GLC+ ++ ++ + ++PD +TYN +I+G CK G
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 135/270 (50%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y E +R+ ++ +A+ +F M PS+ ++ +++ + + F+ +M+
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
G+ ++YTY I I FCR R AL LL M G + V +++ GF
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A L D+M+E PD TF L+HGL E+ L++++++RG P+L TY +
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
GLC+ G D A+ L + + +VV Y+TVI LC+ ++ +M N G++
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
P+ TY+++I C G DA+R+L D +
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 129/270 (47%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
+ + + + + K + E+M++ ++++YN ++N + A + +M
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
G D+ T + FC R A+ L+ M G + V + T++ G +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A L D M++R PD+ T+ +V+GLCK+G + LLNK+ + N+ Y+ I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
LC+ D A+ + +G+ P+V+TY+++I LC R ++ L M+ +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
P+ T++ +ID + KKG + A ++ ++ +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 120/238 (50%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
EP + + N+++N + A + +M + G D T+T I + A+
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
L+ M GC + V Y VV G + GD DLA L ++M + +V ++ ++ LC
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K ++ L ++ +GV PN+ TY+ I LC G A L + ++P++V
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
T++ +I +K ++V++E+ +M+ + P+ FTY+++I+G+C + +A ++L+
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEEC 263
P++ ++ + + + D + F + G+S ++ TYN +I CR SR+ +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 264 LHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
L KM+ G +PD T N++++G+C + DA ++ V G+K
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 149/297 (50%), Gaps = 7/297 (2%)
Query: 1 MLQKLGHHREFNQMENLL--SEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
ML+ LG R N N L E R+ L + + +RSYG G QE+V +F+ M
Sbjct: 106 MLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMK 165
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK-GVGSDVYTYTIRIKSFCRTGRP 117
PSV ++N++++IL++ G AH ++ M+ GV D YT+ I FC+
Sbjct: 166 QMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMV 225
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS--LCPDVATFN 175
A R+ ++M ++ C+ + V Y T++ G G +A + ML+++ + P+V ++
Sbjct: 226 DEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYT 285
Query: 176 KLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD--RAVVFLGSVS 233
LV G C K + E+ + + +L RG+ PN TYN I+GL D + ++ G+ +
Sbjct: 286 TLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDA 345
Query: 234 REGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
+PD T+N +I C + + + +M+N L PD +Y+ +I C +
Sbjct: 346 FTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRN 402
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER-S 166
I+S+ G +++L + M G S + + + ++++ + G +A +LFDEM
Sbjct: 145 IRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYG 204
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
+ PD TFN L++G CK V E+ ++ + +P++ TYN I GLCR G + A
Sbjct: 205 VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAH 264
Query: 227 VFLGSVSREG--MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
L + ++ + P+VV+Y T++ G C K + E+ H M++ GL+P+ TYNT+I
Sbjct: 265 NVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIK 324
Query: 285 GYCKKGMVQDANRIL 299
G + + IL
Sbjct: 325 GLSEAHRYDEIKDIL 339
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 10/272 (3%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y +R Y ++ EAV VF M +P+ +YN ++ L E +++ + +
Sbjct: 283 SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGG 342
Query: 93 KD--KGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
D D T+ I IK+ C G AA+++ + M ++ +Y ++
Sbjct: 343 NDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRN 402
Query: 151 DRDLARELFDEMLERSLC-------PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVS 203
+ D A LF+E+ E+ + P A +N + LC G ++EK+ +++KRGV
Sbjct: 403 EFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ 462
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEEC 263
+ +Y I G CREG A L + R PD+ TY +I GL + + + +
Sbjct: 463 -DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDT 521
Query: 264 LHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
L +M+ P T+++++ K+ ++
Sbjct: 522 LQRMLRSSYLPVATTFHSVLAELAKRKFANES 553
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR-GVSPNLFTYNIFIQG 215
+LF M + + P V TFN L+ L K+G + L +++ + GV+P+ +T+N I G
Sbjct: 159 KLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLING 218
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG--LQ 273
C+ +D A + +PDVVTYNT+I GLCR +V + L M+ +
Sbjct: 219 FCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVH 278
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
P+ +Y T++ GYC K + +A + D + +G K
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 313
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 174 FNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVS 233
FN L+ G ES KL + + G+SP++ T+N + L + G A +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 234 RE-GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
R G++PD T+NT+I G C+ S V E+ M PD TYNTIIDG C+ G V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 293 QDANRILKDAVFKG 306
+ A+ +L + K
Sbjct: 261 KIAHNVLSGMLKKA 274
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 4/227 (1%)
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAAL 121
C+P +YN + L G QA KV+ ++ +GV D +Y I CR G+ A
Sbjct: 426 CKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAY 484
Query: 122 RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGL 181
LL M + Y ++ G + G+ LA + ML S P TF+ ++ L
Sbjct: 485 ELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 544
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
K+ F ES L+ +L++ + N+ ++ L ++A + + + G +
Sbjct: 545 AKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGY---L 601
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
V ++ LC +++++ + + D T NT+I+G CK
Sbjct: 602 VKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCK 648
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 150/271 (55%), Gaps = 6/271 (2%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
A ++A G+F +E + RM + P++ +Y +++N G ++A +++ M
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSI---APNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ KG DV YT I FC+ + A+++ MS G + N + Y T++ GF + G
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR---GVSPNLFTY 209
++A+E+F M+ R + P++ T+N L+H LC G V ++ + + KR GV+PN++TY
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
N+ + GLC G L++A++ + + M ++TY +I G+C+ +V + + +
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
G++P+ TY T+I G ++G+ +A+ + +
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
EP + ++ +++N +A + +M + G+ DV YT I S C+ G + AL
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
L M +G + V Y ++V G G A L M +R + PDV TFN L+
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K+G ++E+L N++++ ++PN+FTY I G C EG +D A + +G PDVV
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
Y ++I G C+ +V ++ + ++M GL + TY T+I G+ + G A +
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 303 VFKG 306
V +G
Sbjct: 379 VSRG 382
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 138/266 (51%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y E +R+ + EA+D+F M PS+ + ++N++ + F+ + ++
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
GV D+YT + + FC++ +P+ A L M G + V + +++ GF +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A + ++M+E + PDV + ++ LCK G V + L +++ G+ P++ Y +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
GLC G A L +++ + PDV+T+N +I ++ + +++EE ++M+ +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRIL 299
P+ FTY ++I+G+C +G V +A ++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMF 305
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 135/256 (52%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+++EA+ + +M +P V Y I++ L + G+ N A ++ +M++ G+ DV YT
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
+ C +GR A LLR M+ + + + ++ F + G A EL++EM+
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
S+ P++ T+ L++G C +G V E+ ++ + +G P++ Y I G C+ +D A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ +S++G++ + +TY T+I G + + ++E MV+ G+ P+ TYN ++
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 286 YCKKGMVQDANRILKD 301
C G V+ A I +D
Sbjct: 397 LCYNGKVKKALMIFED 412
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 5/303 (1%)
Query: 7 HHREFNQMENLLSEMRATLENNLLEGA--YVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
H +FN+ +L + M +E+ L + + + + K +++ + + +
Sbjct: 49 HSLQFNEALDLFTHM---VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSH 105
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
+++ N +MN + A +M G D+ T+T I FC R A+ ++
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
M G + V Y T++ + G + A LFD+M + PDV + LV+GLC
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
G +++ LL + KR + P++ T+N I +EG A + R ++P++ TY
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVF 304
++I G C + V E+ + + M G PD Y ++I+G+CK V DA +I +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 305 KGF 307
KG
Sbjct: 346 KGL 348
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 146/296 (49%), Gaps = 7/296 (2%)
Query: 12 NQMENLLSEMRATLENNLLEGA--YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSY 69
N+ME +S + +E + Y + S + G V A+ +F++M+ Y P V Y
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
+++N L G + A + M + + DV T+ I +F + G+ A L M
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
+ N Y +++ GF G D AR++F M + PDV + L++G CK V +
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV-VFLGSVSREGMSPDVVTYNTVI 248
+ K+ ++ ++G++ N TY IQG + G + A VF VSR G+ P++ TYN ++
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR-GVPPNIRTYNVLL 394
Query: 249 CGLCRKSRVVESE---ECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
LC +V ++ E + K DG+ P+ +TYN ++ G C G ++ A + +D
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 150/301 (49%), Gaps = 11/301 (3%)
Query: 11 FNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYN 70
F+QMEN + +L+ G + + GR+ ++A + M +P V ++N
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNG-----LCNSGRW---RDADSLLRGMTKRKIKPDVITFN 251
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
A+++ V+ G F A ++Y M + +++TYT I FC G A ++ M
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
GC + VAY +++ GF + D A ++F EM ++ L + T+ L+ G + G +
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR---EGMSPDVVTYNTV 247
+++ + ++ RGV PN+ TYN+ + LC G + +A++ + + +G++P++ TYN +
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+ GLC ++ ++ M + TY II G CK G V++A + KG
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491
Query: 308 K 308
K
Sbjct: 492 K 492
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 41/268 (15%)
Query: 10 EFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
+F E L +EM R ++ N+ Y + + G V EA +F M+ C P V +
Sbjct: 262 KFLDAEELYNEMIRMSIAPNIF--TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
Y +++N + + A K++ M KG+ + TYT I+ F + G+P+ A + +M
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL---CPDVATFNKLVHGLC--- 182
G N Y ++ G A +F++M +R + P++ T+N L+HGLC
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Query: 183 --------------------------------KKGFVPESEKLLNKVLKRGVSPNLFTYN 210
K G V + L + +GV PN+ TY
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMS 238
I GL REG A V + +G+S
Sbjct: 500 TMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 157/309 (50%), Gaps = 4/309 (1%)
Query: 2 LQKLGHHREFNQMENLLSEMRATLEN-NLLEGAYVEAMRSYGRFGKVQEAVDVFERM-DL 59
L+ L +R FN++E++L +R EN L A + +Y G + +AV++++ + +L
Sbjct: 106 LKLLARYRIFNEIEDVLGNLRN--ENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVEL 163
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
Y+ P V + N+++++LV+ A KVY M D+G D Y+ I +K C G+
Sbjct: 164 YDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEV 223
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
+L+ GC N V Y T++ G+ + GD + A +F E+ + P + TF +++
Sbjct: 224 GRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMIN 283
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
G CK+G S++LL++V +RG+ +++ N I R G +G + P
Sbjct: 284 GFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKP 343
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
DV TYN +I LC++ + + L + GL P+ +Y +I YCK A+++L
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 300 KDAVFKGFK 308
+G K
Sbjct: 404 LQMAERGCK 412
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 29/314 (9%)
Query: 1 MLQKLGHHREFNQMENLLSEMR-------ATLENNLLEGAYVEAMRSYGRFGKVQEAVDV 53
M+ +F + LLSE++ NN+++ Y R G + +
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKY--------RHGYKVDPAES 332
Query: 54 FERMDLYNCEPSVHSYNAIMNIL-------VEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
+ +C+P V +YN ++N L V G+ ++A K KG+ + +Y
Sbjct: 333 IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK-------KGLIPNNLSYAP 385
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I+++C++ A +LL M+ GC + V Y ++ G G D A + ++++R
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
+ PD A +N L+ GLCK G ++ L +++L R + P+ + Y I G R G D A
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
+G+ DVV +N +I G CR + E+ C+++M + L PD+FTY+TIIDGY
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 287 CKKGMVQDANRILK 300
K+ + A +I +
Sbjct: 566 VKQQDMATAIKIFR 579
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 132/269 (49%), Gaps = 3/269 (1%)
Query: 22 RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGY 81
+ + NNL +Y +++Y + + A + +M C+P + +Y +++ LV G+
Sbjct: 374 KGLIPNNL---SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGH 430
Query: 82 FNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCT 141
+ A + +++ D+GV D Y + + C+TGR A L M +A Y T
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490
Query: 142 VVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG 201
++ GF GD D AR++F +E+ + DV N ++ G C+ G + E+ +N++ +
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 202 VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESE 261
+ P+ FTY+ I G ++ + A+ + + P+VVTY ++I G C + +E
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610
Query: 262 ECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
E +M L P+ TY T+I K+
Sbjct: 611 ETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 129/257 (50%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK + AV + P+ SY ++ + ++ A K+ ++M ++G D+ TY
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I I +G A+ + + G S +A Y +++G + G A+ LF EML+
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R++ PD + L+ G + G E+ K+ + +++GV ++ +N I+G CR G LD
Sbjct: 479 RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+ + ++ E + PD TY+T+I G ++ + + + M + +P+ TY ++I+
Sbjct: 539 ALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLIN 598
Query: 285 GYCKKGMVQDANRILKD 301
G+C +G + A K+
Sbjct: 599 GFCCQGDFKMAEETFKE 615
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 15/285 (5%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
M + G+ A +F M N P + Y +++ + G F++A KV+ +KGV
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
DV + IK FCR+G AL + M+ + Y T++ G+ + D A +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+F M + P+V T+ L++G C +G +E+ ++ R + PN+ TY I+ L
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
Query: 218 REGA-LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSR---VVESE-----------E 262
+E + L++AV + + P+ VT+N ++ G +K+ + E + E
Sbjct: 637 KESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSE 696
Query: 263 CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
H+M +DG YN+ + C GMV+ A V KGF
Sbjct: 697 FFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGF 741
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 122/291 (41%), Gaps = 20/291 (6%)
Query: 17 LLSEMRATLENNLLEGAYVEA--MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMN 74
L SEM L+ N+L AYV A + + R G EA VF + V +NA++
Sbjct: 472 LFSEM---LDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 75 ILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSF 134
G ++A RM ++ + D +TY+ I + + A+++ R M C
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 135 NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL 194
N V Y +++ GF GD +A E F EM R L P+V T+ L+ L K+ E
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 195 NKVL-KRGVSPNLFTYNIFIQGLCRE--------------GALDRAVVFLGSVSREGMSP 239
+++ PN T+N +QG ++ G F + +G S
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSD 708
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
YN+ + LC V + KMV G PD ++ I+ G+C G
Sbjct: 709 HAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 147/297 (49%), Gaps = 35/297 (11%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G ++ A+ + E M L P V +YN ++ + ++G QA + + G + TY
Sbjct: 188 GHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITY 247
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
T+ ++ CR A+ +L +M+V GC + V Y ++V G+ + + +L
Sbjct: 248 TVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILS 307
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
L + T+N L+H LC + E E++LN + + P + TYNI I GLC+ L R
Sbjct: 308 HGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSR 367
Query: 225 AVVF-------------------LGSVSREGM----------------SPDVVTYNTVIC 249
A+ F LG++S+EGM P ++TYN+VI
Sbjct: 368 AIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
GL +K + ++ E H+M++ G+ PD+ T ++I G+C+ +V++A ++LK+ +G
Sbjct: 428 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R R ++ +A+ + M + P +YN I+ L + G+ A + M G
Sbjct: 146 VRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGS 205
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
DV TY I+ G A+R ++ GC + Y +V + A E
Sbjct: 206 PPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE 265
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ ++M PD+ T+N LV+ C++G + E ++ +L G+ N TYN + LC
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
D L + + P V+TYN +I GLC+ + + + ++M+ PD
Sbjct: 326 SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIV 385
Query: 278 TYNTIIDGYCKKGMVQDANRIL 299
TYNT++ K+GMV DA +L
Sbjct: 386 TYNTVLGAMSKEGMVDDAIELL 407
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 120/260 (46%)
Query: 36 EAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK 95
E + + GK+ +A + E M +N P S + ++ L ++A + M
Sbjct: 109 EILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMS 168
Query: 96 GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLA 155
G D TY + I + C+ G AL LL +MS+ G + + Y TV+ +++G+ + A
Sbjct: 169 GGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQA 228
Query: 156 RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
+ + L+ P + T+ LV +C+ + ++L + G P++ TYN +
Sbjct: 229 IRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNY 288
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
CR G L+ + + G+ + VTYNT++ LC E EE L+ M P
Sbjct: 289 NCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPT 348
Query: 276 EFTYNTIIDGYCKKGMVQDA 295
TYN +I+G CK ++ A
Sbjct: 349 VITYNILINGLCKARLLSRA 368
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 8/278 (2%)
Query: 25 LENNLLEGAYVE-----AMRSYG-RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVE 78
LE+ +EG Y + ++ +Y R G ++E V + + + E + +YN +++ L
Sbjct: 267 LEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCS 326
Query: 79 FGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVA 138
Y+++ ++ M V TY I I C+ A+ M C + V
Sbjct: 327 HEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVT 386
Query: 139 YCTVVAGFYEFGDRDLARELFDEMLERSLCPD-VATFNKLVHGLCKKGFVPESEKLLNKV 197
Y TV+ + G D A EL +L+ + CP + T+N ++ GL KKG + ++ +L +++
Sbjct: 387 YNTVLGAMSKEGMVDDAIELLG-LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM 445
Query: 198 LKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRV 257
L G+ P+ T I G CR ++ A L S G TY VI GLC+K +
Sbjct: 446 LDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEI 505
Query: 258 VESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+ E + M+ G +PDE Y I+ G + GM +A
Sbjct: 506 EMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%)
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
+ + C G+ A +L+ M+ + + +V G D A + M+
Sbjct: 111 LHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGG 170
Query: 168 CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVV 227
PD T+N ++ LCKKG + + LL + G P++ TYN I+ + G ++A+
Sbjct: 171 VPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR 230
Query: 228 FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
F + G P ++TY ++ +CR + E L M +G PD TYN++++ C
Sbjct: 231 FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNC 290
Query: 288 KKGMVQDANRILKDAVFKGFK 308
++G +++ +++ + G +
Sbjct: 291 RRGNLEEVASVIQHILSHGLE 311
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%)
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
D T N+++H LC G + ++ KL+ + + P+ + + ++GL R LD+A+ L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
+ G PD +TYN +I LC+K + + L M G PD TYNT+I
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 290 GMVQDANRILKDAVFKG 306
G + A R KD + G
Sbjct: 223 GNAEQAIRFWKDQLQNG 239
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 1/268 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y +++Y + G + A+++ M + + + N I++ L + ++AH +
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+G D TY I F R + AL + M + + +++ G G
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+LA E FDE+ E L PD +TFN ++ G CK+G V ++ + N+ +K P+ +T NI
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ GLC+EG ++A+ F ++ E D VTYNT+I C+ ++ E+ + L +M GL
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILK 300
+PD FTYN+ I + G + + + +LK
Sbjct: 657 EPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 141/265 (53%), Gaps = 1/265 (0%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G ++E +++ + M +P V +YN +++ E G +A K+ +M++ GV ++ T+
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 105 TIRIKSFCRTGRPHAALRLLRNM-SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
I +K C+ + A R ++ + + G S + V Y T++ + + GD A E+ EM
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
++ + + T N ++ LCK+ + E+ LLN KRG + TY I G RE ++
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
+A+ + + ++P V T+N++I GLC + + E ++ GL PD+ T+N+II
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 284 DGYCKKGMVQDANRILKDAVFKGFK 308
GYCK+G V+ A +++ FK
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFK 588
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 143/271 (52%), Gaps = 4/271 (1%)
Query: 37 AMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGY---FNQAHKVYMRMK 93
A+ +Y GK A+ +F++M +P++ + N ++ LV + + A +V+ M
Sbjct: 137 ALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMV 196
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM-SVFGCSFNAVAYCTVVAGFYEFGDR 152
GV +V T+ + + +C G+ AL +L M S F + + V Y T++ + G
Sbjct: 197 KIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRL 256
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+EL +M + L P+ T+N LV+G CK G + E+ +++ + + V P+L TYNI
Sbjct: 257 SDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNIL 316
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I GLC G++ + + ++ + PDVVTYNT+I G +E+ + + +M NDG+
Sbjct: 317 INGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGV 376
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
+ ++ T+N + CK+ + R +K+ V
Sbjct: 377 KANQVTHNISLKWLCKEEKREAVTRKVKELV 407
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 133/323 (41%), Gaps = 66/323 (20%)
Query: 1 MLQKLGHHREFNQMENLL--SEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
+L L R+ ++ NLL + R + + + G + + R KV++A+++++ M
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI---MGFFREEKVEKALEMWDEMK 513
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
P+V ++N+++ L G A + + + + G+ D T+ I +C+ GR
Sbjct: 514 KVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE 573
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A E ++E ++ S PD T N L+
Sbjct: 574 KAF-----------------------------------EFYNESIKHSFKPDNYTCNILL 598
Query: 179 HGLCKKGFVPESEKLLNKVL-KRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+GLCK+G ++ N ++ +R V + TYN I C++ L A L + +G+
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKM-----------------------VNDGLQP 274
PD TYN+ I L ++ E++E L K + L
Sbjct: 657 EPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNT 716
Query: 275 DEFTYNTIIDGYCKKGMVQDANR 297
+ Y+ +ID C +G +++ +R
Sbjct: 717 EAIAYSDVIDELCSRGRLKEHSR 739
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 131/233 (56%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
EP+V YN +++ L + G N A ++ M+ KG+G+DV TY + C +GR A R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
+LR+M + + V + ++ F + G+ D A+EL+ EM++ S+ P+ T+N +++GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
G + +++K + + +G PN+ TYN I G C+ +D + +S EG + D+
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
TYNT+I G C+ ++ + + MV+ + PD T+ ++ G C G ++ A
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 131/263 (49%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
++ + + R ++ A+ V +M EPS+ ++ ++++ A + + M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
G +V Y I C+ G + AL LL M G + V Y T++ G G
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A + +M++RS+ PDV TF L+ K+G + E+++L ++++ V PN TYN
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I GLC G L A ++ +G P+VVTYNT+I G C+ V E + +M +G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 273 QPDEFTYNTIIDGYCKKGMVQDA 295
D FTYNT+I GYC+ G ++ A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVA 370
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 131/253 (51%)
Query: 55 ERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRT 114
++M+LY ++S+ +++ + A V +M G + T+ + FC
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 115 GRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATF 174
R A L+ M G N V Y T++ G + G+ ++A EL +EM ++ L DV T+
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 175 NKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
N L+ GLC G ++ ++L ++KR ++P++ T+ I ++G LD A + +
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 235 EGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
+ P+ VTYN++I GLC R+ ++++ M + G P+ TYNT+I G+CK MV +
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 295 ANRILKDAVFKGF 307
++ + +GF
Sbjct: 335 GMKLFQRMSCEGF 347
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 132/256 (51%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+ +A + M + P V ++ A++++ V+ G ++A ++Y M V + TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I C GR + A + M+ GC N V Y T+++GF +F D +LF M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
D+ T+N L+HG C+ G + + + ++ R V+P++ T+ I + GLC G ++
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+V + +V YN +I GLC+ +V ++ E ++ +G++PD TY +I
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 285 GYCKKGMVQDANRILK 300
G CK G ++A+ +++
Sbjct: 465 GLCKNGPRREADELIR 480
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 115/228 (50%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + EA ++++ M + +P+ +YN+I+N L G A K + M KG +V TY
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I FC+ ++L + MS G + + Y T++ G+ + G +A ++F M+
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + PD+ T L+HGLC G + + + + + + YNI I GLC+ +++
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEK 439
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
A + EG+ PD TY +I GLC+ E++E + +M +G+
Sbjct: 440 AWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 41/223 (18%)
Query: 81 YFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYC 140
YF+Q ++Y G+ D+Y++TI I FCR R AL +L M G
Sbjct: 92 YFSQKMELY------GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG--------- 136
Query: 141 TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR 200
YE P + TF L+HG C + ++ L+ ++K
Sbjct: 137 ------YE--------------------PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 201 GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
G PN+ YN I GLC+ G L+ A+ L + ++G+ DVVTYNT++ GLC R ++
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 261 EECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
L M+ + PD T+ +ID + K+G + +A + K+ +
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 1/284 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRF-GKVQEAVDVFERMDL 59
M+ K G + ++++E ++ ++ E + MR YG G++ A+++ M
Sbjct: 101 MINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPD 160
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+ C PS S+N I+N+LV F++ HK+++ GV D I IK C +G A
Sbjct: 161 FGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEA 220
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
AL+LL N + + ++ GF G + A +L + M + + PD TFN L+
Sbjct: 221 ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILIS 280
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
GL KKG V E LL ++ +G PN TY + GL + A + + GM P
Sbjct: 281 GLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
++Y ++ GLC VVE + L +MVN G P + ++
Sbjct: 341 SFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 114 TGRPHAALRLLRNMSVFGC-----SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC 168
GR + A+ +L M FGC SFN + V A + D ++F + +
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLF-----DEIHKIFVSAPKLGVE 199
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
D N L+ GLC+ G + + +LL++ ++ PN+ T++ I+G C +G + A
Sbjct: 200 IDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKL 259
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
L + +E + PD +T+N +I GL +K RV E + L +M G +P+ TY ++ G
Sbjct: 260 LERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLD 319
Query: 289 KGMVQDANRILKDAVFKGFK 308
K +A ++ + G +
Sbjct: 320 KKRNLEAKEMMSQMISWGMR 339
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 116/232 (50%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P VH Y + + G +++ K+ M G+ +VY YTI I CR + A ++
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
M G N Y ++ G+ + G+ A L+ E+L L P+V F LV G CK
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
+ + L ++K GV PNL+ YN I G C+ G + AV L + +SPDV T
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFT 376
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
Y +I GLC + +V E+ KM N+ + P TYN++I GYCK+ ++ A
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 138/266 (51%), Gaps = 3/266 (1%)
Query: 42 GRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDV 101
G + K ++ +D M +P+V+ Y + L +A K++ MK GV ++
Sbjct: 213 GLYSKKEKLLD---EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
YTY+ I +C+TG A L + + V N V + T+V GF + + AR LF
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
M++ + P++ +N L+HG CK G + E+ LL+++ +SP++FTY I I GLC E
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
+ A + E + P TYN++I G C++ + ++ + +M G++P+ T++T
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 282 IIDGYCKKGMVQDANRILKDAVFKGF 307
+IDGYC ++ A + + KG
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGI 475
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 149/298 (50%), Gaps = 3/298 (1%)
Query: 11 FNQMENLLSEMRAT-LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSY 69
+++ E LL EM + ++ N+ Y + R K++EA +FE M + P++++Y
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVY--IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
+A+++ + G QA+ +Y + + +V + + FC+ A L +M
Sbjct: 273 SAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
FG N Y ++ G + G+ A L EM +L PDV T+ L++GLC + V E
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
+ +L K+ + P+ TYN I G C+E +++A+ ++ G+ P+++T++T+I
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
G C + + +M G+ PD TY +ID + K+ +++A R+ D + G
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 10/293 (3%)
Query: 8 HREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVH 67
HR FN +E++ S + G + + + G +EA+ V M C P
Sbjct: 116 HRLFNALEDIQSPKFSI-------GVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSK 165
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+ +I+N LV F+ Y M +G+ DV+ Y + + + G +LL M
Sbjct: 166 ACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEM 225
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
+ G N Y + + A ++F+ M + + P++ T++ ++ G CK G V
Sbjct: 226 TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNV 285
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
++ L ++L + PN+ + + G C+ L A + + G+ P++ YN +
Sbjct: 286 RQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCL 345
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
I G C+ ++E+ L +M + L PD FTY +I+G C + V +ANR+ +
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ 398
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 126/263 (47%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + EAV + M+ N P V +Y ++N L +A++++ +MK++ + TY
Sbjct: 353 GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I +C+ AL L M+ G N + + T++ G+ D A L+ EM
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ + PDV T+ L+ K+ + E+ +L + +L+ G+ PN T+ + G +EG L
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSV 532
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+ F +++ + V + +I GLC+ ++ + M + G+ PD +Y +++
Sbjct: 533 AIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLK 592
Query: 285 GYCKKGMVQDANRILKDAVFKGF 307
G+ ++ + D + D + G
Sbjct: 593 GHLQEKRITDTMMLQCDMIKTGI 615
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 111/236 (47%), Gaps = 8/236 (3%)
Query: 8 HREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVH 67
+R F +M+N + N+L+ G Y + +++A+D+ M EP++
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHG--------YCKEYNMEQALDLCSEMTASGVEPNII 445
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+++ +++ A +Y M KG+ DV TYT I + + ALRL +M
Sbjct: 446 TFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM 505
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
G N + +V GF++ G +A + + E ++ C + F L+ GLC+ G++
Sbjct: 506 LEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYI 565
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
+ + + + G++P++ +Y ++G +E + ++ + + G+ P+++
Sbjct: 566 LRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 134 FNAVAYCTVVAGFYEFGDRDLARELFDEML----ERSLCPDVATFNKLVHGLCKKGFVPE 189
F+ + ++ F E G LF+E L E PD +++GL ++
Sbjct: 130 FSIGVFSLLIMEFLEMG-------LFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDS 182
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
++ RG+ P++ Y + Q ++G + L ++ G+ P+V Y I
Sbjct: 183 VWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYIL 242
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
LCR +++ E+E+ M G+ P+ +TY+ +IDGYCK G V+ A + K+ +
Sbjct: 243 DLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL 296
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 6/303 (1%)
Query: 5 LGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
L H RE ++M ++ E++ + N E Y + R K+++AV + + P
Sbjct: 166 LYHFRETDKMWDVYKEIK---DKN--EHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP 220
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
SV S+N+IM+ + G+ + A + + G+ VY++ I I C G AL L
Sbjct: 221 SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELA 280
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
+M+ G ++V Y + GF+ G A E+ +ML++ L PDV T+ L+ G C+
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 185 GFVPESEKLLNKVLKRGVSPN-LFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + LL +L RG N + ++ + GLC+ G +D A+ + +G+SPD+V
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
Y+ VI GLC+ + + +M + + P+ T+ ++ G C+KGM+ +A +L +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 304 FKG 306
G
Sbjct: 461 SSG 463
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 36/299 (12%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + EA+++ M+ + EP +YN + G + A +V M DKG+ DV TY
Sbjct: 271 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 330
Query: 105 TI------------------------------------RIKSFCRTGRPHAALRLLRNMS 128
TI + C+TGR AL L M
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G S + VAY V+ G + G D+A L+DEM ++ + P+ T L+ GLC+KG +
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E+ LL+ ++ G + ++ YNI I G + G ++ A+ V G++P V T+N++I
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
G C+ + E+ + L + GL P +Y T++D Y G + + + ++ +G
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 137/304 (45%), Gaps = 47/304 (15%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ G++ EA+ +F +M P + +Y+ +++ L + G F+ A +Y M DK + +
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
T+ + C+ G A LL ++ G + + V Y V+ G+ + G + A ELF +
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKV------------------------- 197
+E + P VATFN L++G CK + E+ K+L+ +
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 198 -----LKR-----GVSPNLFTYNIFIQGLC------------REGALDRAVVFLGSVSRE 235
L+R G+ P TY++ +GLC RE ++ L + E
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 236 GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
G+ PD +TYNT+I LCR + + L M + L TYN +ID C G ++ A
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA 674
Query: 296 NRIL 299
+ +
Sbjct: 675 DSFI 678
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 53/300 (17%)
Query: 20 EMRATLENNLLEGAYVEAMRSYG-----------RFGKVQEAVDVFERMDLYNCEPSVHS 68
E++ LE L E S G R V +++ + ++M N S S
Sbjct: 102 ELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQS 161
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN++ L F ++ VY +KDK + +TY+ + CR + A+ LR
Sbjct: 162 YNSV---LYHFRETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTS- 213
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
E+ D + P V +FN ++ G CK GFV
Sbjct: 214 -------------------EWKD---------------IGPSVVSFNSIMSGYCKLGFVD 239
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
++ VLK G+ P+++++NI I GLC G++ A+ +++ G+ PD VTYN +
Sbjct: 240 MAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILA 299
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
G + + E + M++ GL PD TY ++ G C+ G + +LKD + +GF+
Sbjct: 300 KGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE 359
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN +++ + G +A +++ + + G+ V T+ I +C+T A ++L +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
++G + + V+Y T++ + G+ EL EM + P T++ + GLC+ G+
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR-GWKH 589
Query: 189 ES------EKLLNKVLK-------RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE 235
E+ E++ K + G+ P+ TYN IQ LCR L A VFL +
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649
Query: 236 GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+ TYN +I LC + +++ ++ + + +F Y T+I +C KG + A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 296 NRILKDAVFKGF 307
++ + +GF
Sbjct: 710 VKLFHQLLHRGF 721
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 131/296 (44%), Gaps = 18/296 (6%)
Query: 15 ENLLSEMRATLENNLLEGAYVE------AMRSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
+ +L E R+ L++ + G ++ + Y + G ++EA+++F+ + PSV +
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
+N+++ + +A K+ +K G+ V +YT + ++ G + L R M
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 129 VFGCSFNAVAYCTVVAGF-----YEFGDRDLARELFD-------EMLERSLCPDVATFNK 176
G V Y + G +E + L +F+ +M + PD T+N
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
++ LC+ + + L + R + + TYNI I LC G + +A F+ S+ +
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
+S Y T+I C K + + H++++ G Y+ +I+ C++ ++
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLM 741
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 6/303 (1%)
Query: 5 LGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
L H RE ++M ++ E++ + N E Y + R K+++AV + + P
Sbjct: 166 LYHFRETDKMWDVYKEIK---DKN--EHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP 220
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
SV S+N+IM+ + G+ + A + + G+ VY++ I I C G AL L
Sbjct: 221 SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELA 280
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
+M+ G ++V Y + GF+ G A E+ +ML++ L PDV T+ L+ G C+
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 185 GFVPESEKLLNKVLKRGVSPN-LFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + LL +L RG N + ++ + GLC+ G +D A+ + +G+SPD+V
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
Y+ VI GLC+ + + +M + + P+ T+ ++ G C+KGM+ +A +L +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 304 FKG 306
G
Sbjct: 461 SSG 463
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 36/299 (12%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + EA+++ M+ + EP +YN + G + A +V M DKG+ DV TY
Sbjct: 271 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 330
Query: 105 TI------------------------------------RIKSFCRTGRPHAALRLLRNMS 128
TI + C+TGR AL L M
Sbjct: 331 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 390
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G S + VAY V+ G + G D+A L+DEM ++ + P+ T L+ GLC+KG +
Sbjct: 391 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 450
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E+ LL+ ++ G + ++ YNI I G + G ++ A+ V G++P V T+N++I
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
G C+ + E+ + L + GL P +Y T++D Y G + + + ++ +G
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 137/304 (45%), Gaps = 47/304 (15%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ G++ EA+ +F +M P + +Y+ +++ L + G F+ A +Y M DK + +
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
T+ + C+ G A LL ++ G + + V Y V+ G+ + G + A ELF +
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKV------------------------- 197
+E + P VATFN L++G CK + E+ K+L+ +
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 198 -----LKR-----GVSPNLFTYNIFIQGLC------------REGALDRAVVFLGSVSRE 235
L+R G+ P TY++ +GLC RE ++ L + E
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 236 GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
G+ PD +TYNT+I LCR + + L M + L TYN +ID C G ++ A
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA 674
Query: 296 NRIL 299
+ +
Sbjct: 675 DSFI 678
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 131/300 (43%), Gaps = 53/300 (17%)
Query: 20 EMRATLENNLLEGAYVEAMRSYG-----------RFGKVQEAVDVFERMDLYNCEPSVHS 68
E++ LE L E S G R V +++ + ++M N S S
Sbjct: 102 ELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQS 161
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN++ L F ++ VY +KDK + +TY+ + CR + A+ LR
Sbjct: 162 YNSV---LYHFRETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTS- 213
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
E+ D + P V +FN ++ G CK GFV
Sbjct: 214 -------------------EWKD---------------IGPSVVSFNSIMSGYCKLGFVD 239
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
++ VLK G+ P+++++NI I GLC G++ A+ +++ G+ PD VTYN +
Sbjct: 240 MAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILA 299
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
G + + E + M++ GL PD TY ++ G C+ G + +LKD + +GF+
Sbjct: 300 KGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE 359
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN +++ + G +A +++ + + G+ V T+ I +C+T A ++L +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
++G + + V+Y T++ + G+ EL EM + P T++ + GLC+ G+
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR-GWKH 589
Query: 189 ES------EKLLNKVLK-------RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE 235
E+ E++ K + G+ P+ TYN IQ LCR L A VFL +
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649
Query: 236 GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+ TYN +I LC + +++ ++ + + +F Y T+I +C KG + A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709
Query: 296 NRILKDAVFKGF 307
++ + +GF
Sbjct: 710 VKLFHQLLHRGF 721
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 131/296 (44%), Gaps = 18/296 (6%)
Query: 15 ENLLSEMRATLENNLLEGAYVE------AMRSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
+ +L E R+ L++ + G ++ + Y + G ++EA+++F+ + PSV +
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
+N+++ + +A K+ +K G+ V +YT + ++ G + L R M
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 129 VFGCSFNAVAYCTVVAGF-----YEFGDRDLARELFD-------EMLERSLCPDVATFNK 176
G V Y + G +E + L +F+ +M + PD T+N
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
++ LC+ + + L + R + + TYNI I LC G + +A F+ S+ +
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
+S Y T+I C K + + H++++ G Y+ +I+ C++ ++
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLM 741
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 144/272 (52%), Gaps = 2/272 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMR-MKDKG 96
+ +YG+ GK+ E ++++ M + CE + ++N +++ LV+ G + A +Y M D+
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
TY I ++GR + A +L M +GC N Y ++ GF + G+ D A
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
LF M++ + PD+ T++ LV LC G V E ++ + G++P++ YN+ I GL
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 217 CREGALDRAVVFLGSV-SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
+ L+ A+V + + G++PD+ TYN++I L V E+ + +++ GL+P+
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Query: 276 EFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
FT+N +I GY G + A + + V GF
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 140/272 (51%), Gaps = 1/272 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y+ + YG+ G A++ FE+M P++ + NA + L + G +A +++ +
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
KD G+ D TY + +K + + G A++LL M GC + + +++ Y+
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A ++F M E L P V T+N L+ GL K G + E+ +L ++++G PN T+N
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
LC+ + A+ L + G PDV TYNT+I GL + +V E+ H+M +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLV 673
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVF 304
PD T T++ G K +++DA +I+ + ++
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 705
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 130/264 (49%), Gaps = 4/264 (1%)
Query: 35 VEAMRSYGRFGKVQEAVDVFERM--DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
V +R + V A +FE+ DL +P + +YN ++ L+E A V++++
Sbjct: 753 VPIIRYSCKHNNVSGARTLFEKFTKDL-GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 811
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K G DV TY + ++ ++G+ L + MS C N + + V++G + G+
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 153 DLARELF-DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
D A +L+ D M +R P T+ L+ GL K G + E+++L +L G PN YNI
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
I G + G D A + +EG+ PD+ TY+ ++ LC RV E ++ G
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDA 295
L PD YN II+G K +++A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEA 1015
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 131/253 (51%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R ++ +A+++F M+ +P+ ++Y ++ + G A + + +MK KG+ ++
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
+ S + GR A ++ + G ++V Y ++ + + G+ D A +L EM
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+E PDV N L++ L K V E+ K+ ++ + + P + TYN + GL + G +
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
A+ + ++G P+ +T+NT+ LC+ V + + L KM++ G PD FTYNTI
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 283 IDGYCKKGMVQDA 295
I G K G V++A
Sbjct: 650 IFGLVKNGQVKEA 662
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 35/309 (11%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y M G+ + + + + M+ +P+V+++ + +L G N+A+++ RM
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
D+G G DV TYT+ I + C + A + M + V Y T++ F + D
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D ++ + EM + PDV TF LV LCK G E+ L+ + +G+ PNL TYN
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 213 IQGLCREGALDRAVVFLG--------------------------SVS---------REGM 237
I GL R LD A+ G SVS +G+
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
+P++V N + L + R E+++ + + + GL PD TYN ++ Y K G + +A +
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 298 ILKDAVFKG 306
+L + + G
Sbjct: 525 LLSEMMENG 533
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 144/301 (47%), Gaps = 5/301 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMR--ATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
+L + +R+ + ++ SEM + + + V+A+ G FG EA D + M
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG---EAFDTLDVMR 390
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
P++H+YN ++ L+ + A +++ M+ GV YTY + I + ++G
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV 450
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
+AL M G + N VA + + G A+++F + + L PD T+N ++
Sbjct: 451 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
K G + E+ KLL+++++ G P++ N I L + +D A + +
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
P VVTYNT++ GL + ++ E+ E MV G P+ T+NT+ D CK V A ++
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 299 L 299
L
Sbjct: 631 L 631
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 120/243 (49%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P V ++ +++ L + G F +A M+D+G+ +++TY I R R AL L
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
NM G A Y + + + GD A E F++M + + P++ N ++ L K
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G E++++ + G+ P+ TYN+ ++ + G +D A+ L + G PDV+
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
N++I L + RV E+ + +M L+P TYNT++ G K G +Q+A + + V
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 304 FKG 306
KG
Sbjct: 601 QKG 603
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + + G++ EA +FE M Y C P+ YN ++N + G + A ++ RM
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+GV D+ TY++ + C GR L + + G + + V Y ++ G +
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRL 1012
Query: 153 DLARELFDEM-LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
+ A LF+EM R + PD+ T+N L+ L G V E+ K+ N++ + G+ PN+FT+N
Sbjct: 1013 EEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
I+G G + A ++ G SP+ TY
Sbjct: 1073 LIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 137/334 (41%), Gaps = 38/334 (11%)
Query: 1 MLQKLGHHREFNQMENLLSEMRAT-LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
++ LG R+ + + LL EM L+ N+ + +R GR GK+ EA ++ +RMD
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMETLGLKPNVY--TFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK-------------------------- 93
C P V +Y +++ L + A +V+ +MK
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Query: 94 ---------DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA 144
G DV T+TI + + C+ G A L M G N Y T++
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 145 GFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP 204
G D A ELF M + P T+ + K G + + K+ +G++P
Sbjct: 407 GLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 466
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL 264
N+ N + L + G A + G+ PD VTYN ++ + + E+ + L
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 526
Query: 265 HKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
+M+ +G +PD N++I+ K V +A ++
Sbjct: 527 SEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 117/263 (44%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y+ +S G +++A +M + + +SYN ++++L++ + +A +VY RM
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 214
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+G + TY+ + + + + LL+ M G N + + G
Sbjct: 215 ILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKI 274
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ A E+ M + PDV T+ L+ LC + ++++ K+ P+ TY
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ LD F + ++G PDVVT+ ++ LC+ E+ + L M + G+
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 273 QPDEFTYNTIIDGYCKKGMVQDA 295
P+ TYNT+I G + + DA
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDA 417
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
+ + N ++ L G + V+ M+ + + D TY KS G A L
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
R M FG NA +Y ++ + A E++ M+ P + T++ L+ GL K+
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
+ LL ++ G+ PN++T+ I I+ L R G ++ A L + EG PDVVTY
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+I LC ++ ++E KM +PD TY T++D
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 108/251 (43%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK++E VF+ M + ++Y I L G QA +M++ G + Y+Y
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I ++ A+ + R M + G + Y +++ G + D D L EM
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
L P+V TF + L + G + E+ ++L ++ G P++ TY + I LC LD
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + PD VTY T++ + ++ +M DG PD T+ ++D
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 285 GYCKKGMVQDA 295
CK G +A
Sbjct: 372 ALCKAGNFGEA 382
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 59 LYNC--EPS-VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSF-CRT 114
LYNC +P+ + + I +IL E G + A R+ G+ D + + I + C+
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKH 762
Query: 115 GRPHAALRLLRNMSV-FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVAT 173
A L + G Y ++ G E ++A+++F ++ PDVAT
Sbjct: 763 NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 174 FNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV-VFLGSV 232
+N L+ K G + E +L ++ N T+NI I GL + G +D A+ ++ +
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 233 SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
S SP TY +I GL + R+ E+++ M++ G +P+ YN +I+G+ K G
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 293 QDANRILKDAVFKGFK 308
A + K V +G +
Sbjct: 943 DAACALFKRMVKEGVR 958
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%)
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+FD M +R + D T+ + L KG + ++ L K+ + G N ++YN I L
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+ A+ + EG P + TY++++ GL ++ + L +M GL+P+ +
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 278 TYNTIIDGYCKKGMVQDANRILK 300
T+ I + G + +A ILK
Sbjct: 260 TFTICIRVLGRAGKINEAYEILK 282
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 152/307 (49%), Gaps = 35/307 (11%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
++ KLG R FN ++++L++ R++ L + ++ Y ++ + F +M +
Sbjct: 90 LILKLGRGRYFNLIDDVLAKHRSS-GYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEF 148
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
N P N I+++LV +H+ Y++ A
Sbjct: 149 NFTPQPKHLNRILDVLV-------SHRGYLQ---------------------------KA 174
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
L ++ + G N +Y ++ F D +A +LF +MLER + PDV ++ L+ G
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
C+KG V + +LL+ +L +G P+ +Y + LCR+ L A L + +G +PD
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPD 294
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+V YNT+I G CR+ R +++ + L M+++G P+ +Y T+I G C +GM + + L+
Sbjct: 295 LVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLE 354
Query: 301 DAVFKGF 307
+ + KGF
Sbjct: 355 EMISKGF 361
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G +Q+A ++F+ L+ P+ SYN +M + A++++ +M ++ V DV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I I+ FCR G+ + A+ LL +M G + ++Y T++ A +L M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ PD+ +N ++ G C++ ++ K+L+ +L G SPN +Y I GLC +G D
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+L + +G SP N ++ G C +V E+ + + ++ +G T+ +I
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 408
Query: 285 GYCKKGMVQDANRILKDAV 303
C + + L+DAV
Sbjct: 409 LICNEDESEKIKLFLEDAV 427
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y ++ + R G+V A+++ + M P SY ++N L +A+K+ RM
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRM 286
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K KG D+ Y I FCR R A ++L +M GCS N+V+Y T++ G + G
Sbjct: 287 KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF 346
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D ++ +EM+ + P + N LV G C G V E+ ++ V+K G + + T+ +
Sbjct: 347 DEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMV 406
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDV 241
I +C E ++ +FL +E ++ D
Sbjct: 407 IPLICNEDESEKIKLFLEDAVKEEITGDT 435
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 158/345 (45%), Gaps = 40/345 (11%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEG--AYVEAMRSYGRFGKVQEAVDVFERMD 58
++ L + N E L EM L LL Y + Y + G +++ V ERM
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEM---LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
+ EPS+ ++N ++ L + G A V MKD G D +T++I + +
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 119 AALRLLRN-------MSVFGCSF----------------------------NAVAYCTVV 143
AAL + M+ + CS N V Y T++
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 144 AGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVS 203
G+ GD AR + M ++ + PD +N L+ C+ G + +EK +NK+ +GVS
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEEC 263
P++ TYNI I G R+ D+ L + G P+VV+Y T+I LC+ S+++E++
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 264 LHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
M + G+ P YN +IDG C KG ++DA R K+ + KG +
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 132/273 (48%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y +A+++ + V + +++F RM PSV YN +++ L + N A +++ M
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+ + + TY I +C+ G P + ++ M + + + T++ G ++ G +
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A + EM + PD TF+ L G + + + GV N +T +I +
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
LC+EG +++A LG +G+ P+ V YNT+I G CRK +V + + M G++
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK 421
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
PD YN +I +C+ G +++A + + KG
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 132/257 (51%), Gaps = 16/257 (6%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK-----DKGVGS 99
GK+++A ++ R P+ YN +++ GY + V RMK +G+
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMID-----GYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF---YEFGDRDLAR 156
D Y I+ FC G A + + M + G S + Y ++ G+ YEF D
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF---DKCF 479
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
++ EM + P+V ++ L++ LCK + E++ + + RGVSP + YN+ I G
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
C +G ++ A F + ++G+ ++VTYNT+I GL ++ E+E+ L ++ GL+PD
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 277 FTYNTIIDGYCKKGMVQ 293
FTYN++I GY G VQ
Sbjct: 600 FTYNSLISGYGFAGNVQ 616
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 142/342 (41%), Gaps = 40/342 (11%)
Query: 1 MLQKLGHHREFNQMENLLS-EMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
+L L + + E +L EM L N E Y + Y R G + A E M+
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPN--EVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+P +YN ++ E G A K +MK KGV V TY I I + R
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
+L+ M G N V+Y T++ + A+ + +M +R + P V +N L+
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
G C KG + ++ + ++LK+G+ NL TYN I GL G L A L +SR+G+ P
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 240 DVVTYNTVICG----------------------------------LCRKSRVVESEECLH 265
DV TYN++I G LC K + +E
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFG 657
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+M L+PD YN ++ Y G ++ A + K + K
Sbjct: 658 EM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 120/241 (49%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
++VF + + PS Y + V+ + +++ RMK + V+ Y + I
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
C+ R + A +L M + + Y T++ G+ + G+ + + ++ + M + P
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
+ TFN L+ GL K G V ++E +L ++ G P+ FT++I G + A+
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
+ G+ + T + ++ LC++ ++ ++EE L + + GL P+E YNT+IDGYC+K
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 290 G 290
G
Sbjct: 403 G 403
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 4/250 (1%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
YGR + + D+ + M+ P+V SY ++N L + +A V M+D+GV
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
V Y + I C G+ A R + M G N V Y T++ G G A +L
Sbjct: 529 VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
E+ + L PDV T+N L+ G G V L ++ + G+ P L TY++ I LC +
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKE 647
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
++ G +S + PD++ YN V+ + ++ +M+ + D+ TYN
Sbjct: 648 GIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Query: 281 TIIDGYCKKG 290
++I G K G
Sbjct: 705 SLILGQLKVG 714
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 8/225 (3%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ EA D+ + +P V +YN++++ G + +Y MK G+ + TY
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFG--CSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
+ I S C RL MS+ +N V +C V GD + A L +M
Sbjct: 638 HLLI-SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAV-----HGDMEKAFNLQKQM 691
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+E+S+ D T+N L+ G K G + E L++++ R + P TYNI ++G C
Sbjct: 692 IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDY 751
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
A V+ + +G DV N ++ GL + R E+E + +M
Sbjct: 752 MSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 4/257 (1%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+++A + M E ++ +YN +++ L G ++A + + + KG+ DV+TY
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I + G + L M G Y +++ + G +L LF EM
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM-- 659
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
SL PD+ +N ++H G + ++ L +++++ + + TYN I G + G L
Sbjct: 660 -SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE 718
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+ ++ M P+ TYN ++ G C + + +M G D N ++
Sbjct: 719 VRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVS 778
Query: 285 GYCKKGMVQDANRILKD 301
G ++ ++A ++ +
Sbjct: 779 GLKEEWRSKEAEIVISE 795
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 145/326 (44%), Gaps = 41/326 (12%)
Query: 19 SEMRATLENNLLEGA--YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNIL 76
S R+ ++ +L A Y M + KV +A ++F M P V SY ++N
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 77 VEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNA 136
+ G +A ++ M ++G+ +V Y + + FCR+G A LL MSV G NA
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 137 VAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC-------------- 182
V YCT++ G+ + GD A LFDEM + L PD + LV G C
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 183 -KKGFVPES---EKLLNKVLKRGVS--------------------PNLFTYNIFIQGLCR 218
KKG + L+N V K G + PN TYNI I LC+
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 219 EGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFT 278
EG L+ A + + P V+TY +++ G + R E + + G++PD
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 279 YNTIIDGYCKKGMVQDANRILKDAVF 304
Y+ II+ + K+GM A +L D +F
Sbjct: 878 YSVIINAFLKEGMTTKA-LVLVDQMF 902
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 153/341 (44%), Gaps = 42/341 (12%)
Query: 6 GHHREFN--QMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYN 61
G+ RE N Q LL EM R + + G V+ M S G + A ++ + M
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG---DLDGAYNIVKEMIASG 447
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAAL 121
C P+V Y ++ ++ F A +V MK++G+ D++ Y I + R A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 122 RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP------------ 169
L M G NA Y ++G+ E + A + EM E + P
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 170 -----------------------DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
D T+ L++GL K V ++E++ ++ +G++P++
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
F+Y + I G + G + +A + EG++P+V+ YN ++ G CR + +++E L +
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
M GL P+ TY TIIDGYCK G + +A R+ + KG
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 125/236 (52%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
+P+ +Y A ++ +E F A K M++ GV + T I +C+ G+ A
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
R+M G +A Y ++ G ++ D A E+F EM + + PDV ++ L++G
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K G + ++ + +++++ G++PN+ YN+ + G CR G +++A L +S +G+ P+ V
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
TY T+I G C+ + E+ +M GL PD F Y T++DG C+ V+ A I
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 135/301 (44%), Gaps = 41/301 (13%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G +++A +F+ M P +Y +++ Q +++ + MK + + YTY
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYE---FGDRDLARELFDE 161
+K C +G A +++ M GC N V Y T++ F + FGD A + E
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD---AMRVLKE 477
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG------ 215
M E+ + PD+ +N L+ GL K + E+ L ++++ G+ PN FTY FI G
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 216 -----------------------------LCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
C++G + A S+ +G+ D TY
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
++ GL + +V ++EE +M G+ PD F+Y +I+G+ K G +Q A+ I + V +G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 307 F 307
Sbjct: 658 L 658
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 120/262 (45%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
V A+ + E M P ++Y+ +++ L + A + + M GV D +TY++
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I + AA L+ M G + Y + + G + A+ LFD M+
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
L P + L+ G C++ V + +LL ++ KR + + +TY ++G+C G LD A
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
+ + G P+VV Y T+I + SR ++ L +M G+ PD F YN++I G
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 287 CKKGMVQDANRILKDAVFKGFK 308
K + +A L + V G K
Sbjct: 498 SKAKRMDEARSFLVEMVENGLK 519
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ ++++A + MD H+Y+ +++ L++ + A + M G+ Y
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPY 348
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
Y I + G A L M G A AY +++ G+ + EL EM
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+R++ T+ +V G+C G + + ++ +++ G PN+ Y I+ +
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
A+ L + +G++PD+ YN++I GL + R+ E+ L +MV +GL+P+ FTY
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 283 IDGYCKKGMVQDANRILKD 301
I GY + A++ +K+
Sbjct: 529 ISGYIEASEFASADKYVKE 547
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK-----GV 97
R V+ A+ +F + C S +NA++N + +FG +V R+ D G
Sbjct: 744 RLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+DV TY I I C+ G AA L M + Y +++ G+ + G R
Sbjct: 803 PNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR-----GVSPNLFTYNIF 212
+FDE + + PD ++ +++ K+G ++ L++++ + G ++ T
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKS 255
+ G + G ++ A + ++ R PD T +I C S
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISS 964
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV-VF 228
D F L G KG++ E+ + + + + P L + + L R LD V+
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK---------------------M 267
G V R + DV TY+ +I CR V ++ L K M
Sbjct: 210 KGMVER-NVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+ GL P ++TY+ +IDG CK ++DA +L
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLL 300
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 134/262 (51%), Gaps = 1/262 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILV-EFGYFNQAHKVYMRMKDKG 96
+ +Y + G ++AV+ F RM ++C P V +YN I+ +++ E +F A VY M
Sbjct: 134 ISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCN 193
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
++YT+ I + + GR A ++ +M+ G S N V Y +++G + G D AR
Sbjct: 194 CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDAR 253
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
+LF EM PD N L+ G CK G + E+ +LL K G L Y+ I GL
Sbjct: 254 KLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGL 313
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
R +A ++ ++ + PD++ Y +I GL + ++ ++ + L M + G+ PD
Sbjct: 314 FRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDT 373
Query: 277 FTYNTIIDGYCKKGMVQDANRI 298
+ YN +I C +G++++ +
Sbjct: 374 YCYNAVIKALCGRGLLEEGRSL 395
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 126/255 (49%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+ +A +F+ M P+ +Y +++ L + G + A K++ M+ G D +
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ FC+ GR A LLR G Y +++ G + A EL+ ML+
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+++ PD+ + L+ GL K G + ++ KLL+ + +G+SP+ + YN I+ LC G L+
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+S PD T+ +IC +CR V E+EE ++ G P T+N +ID
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 285 GYCKKGMVQDANRIL 299
G CK G +++A +L
Sbjct: 452 GLCKSGELKEARLLL 466
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 137/297 (46%), Gaps = 42/297 (14%)
Query: 44 FGKVQEAVDVFERMDLYNCEPSV---HSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
F K+ V+ FE + L+ + V Y+++++ L + QA ++Y M K + D
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+ YTI I+ + G+ AL+LL +M G S + Y V+ G + R L
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL 397
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
EM E PD T L+ +C+ G V E+E++ ++ K G SP++ T+N I GLC+ G
Sbjct: 398 EMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSG 457
Query: 221 ALDRAVVFL-----------------------------GSVSRE----------GMSPDV 241
L A + L GS+ + G SPD+
Sbjct: 458 ELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDI 517
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
V+YN +I G CR + + + L+ + GL PD TYNT+I+G + G ++A ++
Sbjct: 518 VSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 128/306 (41%), Gaps = 48/306 (15%)
Query: 33 AYVEAMRSYG-------RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQA 85
+V +R Y R + +A +++ M N +P + Y ++ L + G A
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 86 HKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAG 145
K+ M KG+ D Y Y IK+ C G L MS +A + ++
Sbjct: 358 LKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICS 417
Query: 146 FYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNK--------- 196
G A E+F E+ + P VATFN L+ GLCK G + E+ LL+K
Sbjct: 418 MCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASL 477
Query: 197 --------------------VLK----------RGVSPNLFTYNIFIQGLCREGALDRAV 226
+LK G SP++ +YN+ I G CR G +D A+
Sbjct: 478 FLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGAL 537
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
L + +G+SPD VTYNT+I GL R R E+ + + D + Y +++
Sbjct: 538 KLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFY--AKDDFRHSPAVYRSLMTWS 595
Query: 287 CKKGMV 292
C+K V
Sbjct: 596 CRKRKV 601
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 36/251 (14%)
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVV-AGFYEFG 150
+K GV D Y + + I ++ + G A+ M F C + Y ++ E
Sbjct: 118 LKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEV 177
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
LA +++EML+ + P++ TF L+ GL KKG +++K+ + + RG+SPN TY
Sbjct: 178 FFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYT 237
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I I GLC+ G+ D A + G PD V +N ++ G C+ R+VE+ E L D
Sbjct: 238 ILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKD 297
Query: 271 G-----------------------------------LQPDEFTYNTIIDGYCKKGMVQDA 295
G ++PD Y +I G K G ++DA
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDA 357
Query: 296 NRILKDAVFKG 306
++L KG
Sbjct: 358 LKLLSSMPSKG 368
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 120/293 (40%), Gaps = 79/293 (26%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQA----HK-------- 87
S R G V+EA ++F ++ C PSV ++NA+++ L + G +A HK
Sbjct: 417 SMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPAS 476
Query: 88 VYMRMK---------------------------DKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+++R+ D G D+ +Y + I FCR G A
Sbjct: 477 LFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGA 536
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF--------DEMLERSL----- 167
L+LL + + G S ++V Y T++ G + G + A +LF + RSL
Sbjct: 537 LKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSC 596
Query: 168 --------------------CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
C D T N++ K+G E+E+ L ++++ +
Sbjct: 597 RKRKVLVAFNLWMKYLKKISCLDDETANEIEQCF-KEG---ETERALRRLIELDTRKDEL 652
Query: 208 T---YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRV 257
T Y I++ GLC+ G A++ + + + + +I GLC++ ++
Sbjct: 653 TLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQL 705
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 132/255 (51%), Gaps = 1/255 (0%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y GK +AV +F M + C + S+N I+++L + +A++++ ++ + D
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVD 194
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
TY + + +C R AL +L+ M G + N Y T++ GF+ G A E F
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFL 254
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
EM +R DV T+ +VHG G + + + +++++ GV P++ TYN IQ LC++
Sbjct: 255 EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 314
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
++ AVV + R G P+V TYN +I GL EE + +M N+G +P+ TYN
Sbjct: 315 NVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYN 374
Query: 281 TIIDGYCKKGMVQDA 295
+I Y + V+ A
Sbjct: 375 MMIRYYSECSEVEKA 389
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 49 EAVDVFERMDLYNCEPSVH---SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+A+ F +D ++ E VH S++ ++I + RM+ +G T+
Sbjct: 72 KALQFFHFLDNHHRE-YVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFA 130
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I + + G+P A++L NM GC + ++ T++ + + A ELF + R
Sbjct: 131 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 190
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
D T+N +++G C P++ ++L ++++RG++PNL TYN ++G R G + A
Sbjct: 191 -FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
F + + DVVTY TV+ G + + +M+ +G+ P TYN +I
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 286 YCKKGMVQDANRILKDAVFKGFK 308
CKK V++A + ++ V +G++
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYE 332
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ + R G+++ A + F M +CE V +Y +++ G +A V+ M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+GV V TY I+ C+ A+ + M G N Y ++ G + G+
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
EL M P+ T+N ++ + V ++ L K+ PNL TYNI
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Query: 213 IQGL 216
I G+
Sbjct: 412 ISGM 415
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 141 TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR 200
+V+ + G + L F + R D ++F+ + + P L++++
Sbjct: 61 SVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSL 120
Query: 201 GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
+ P+ T+ I + G D+AV ++ G D+ ++NT++ LC+ RV ++
Sbjct: 121 RIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 180
Query: 261 EECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
E L + + D TYN I++G+C A +LK+ V +G
Sbjct: 181 YE-LFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 133/249 (53%)
Query: 39 RSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVG 98
+++ K + A D F +M Y P+V S NA M+ L+ G + A + Y M+ +
Sbjct: 176 KTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKIS 235
Query: 99 SDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAREL 158
+ YT + + +CR+G+ + LL++M G V+Y T++AG E G A +L
Sbjct: 236 PNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL 295
Query: 159 FDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCR 218
+ M + L P+V TFN L+HG C+ + E+ K+ ++ V+PN TYN I G +
Sbjct: 296 KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQ 355
Query: 219 EGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFT 278
+G + A F + G+ D++TYN +I GLC++++ ++ + + ++ + L P+ T
Sbjct: 356 QGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 279 YNTIIDGYC 287
++ +I G C
Sbjct: 416 FSALIMGQC 424
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 128/270 (47%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
M Y R GK+ + +++ + M+ + SYN ++ E G + A K+ M G+
Sbjct: 245 MSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL 304
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+V T+ I FCR + A ++ M + N V Y T++ G+ + GD ++A
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+++M+ + D+ T+N L+ GLCK+ ++ + + ++ K + PN T++ I G C
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
DR S+ R G P+ T+N ++ CR + + L +MV + D
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
T + + +G +G Q ++L++ K F
Sbjct: 485 TVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 119/260 (45%), Gaps = 4/260 (1%)
Query: 45 GKVQEAVDVFERMDLYN---CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDV 101
G V VF+ + LY+ C+ + ++++ F A +M+MKD G V
Sbjct: 145 GGVDLPAKVFDAL-LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTV 203
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
+ + S GR ALR R M S N V++G+ G D EL +
Sbjct: 204 ESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQD 263
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
M ++N L+ G C+KG + + KL N + K G+ PN+ T+N I G CR
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
L A G + ++P+ VTYNT+I G ++ + MV +G+Q D TYN
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 282 IIDGYCKKGMVQDANRILKD 301
+I G CK+ + A + +K+
Sbjct: 384 LIFGLCKQAKTRKAAQFVKE 403
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 133/249 (53%)
Query: 39 RSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVG 98
+++ K + A D F +M Y P+V S NA M+ L+ G + A + Y M+ +
Sbjct: 176 KTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKIS 235
Query: 99 SDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAREL 158
+ YT + + +CR+G+ + LL++M G V+Y T++AG E G A +L
Sbjct: 236 PNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKL 295
Query: 159 FDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCR 218
+ M + L P+V TFN L+HG C+ + E+ K+ ++ V+PN TYN I G +
Sbjct: 296 KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQ 355
Query: 219 EGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFT 278
+G + A F + G+ D++TYN +I GLC++++ ++ + + ++ + L P+ T
Sbjct: 356 QGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 279 YNTIIDGYC 287
++ +I G C
Sbjct: 416 FSALIMGQC 424
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 128/270 (47%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
M Y R GK+ + +++ + M+ + SYN ++ E G + A K+ M G+
Sbjct: 245 MSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL 304
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+V T+ I FCR + A ++ M + N V Y T++ G+ + GD ++A
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+++M+ + D+ T+N L+ GLCK+ ++ + + ++ K + PN T++ I G C
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
DR S+ R G P+ T+N ++ CR + + L +MV + D
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
T + + +G +G Q ++L++ K F
Sbjct: 485 TVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 119/260 (45%), Gaps = 4/260 (1%)
Query: 45 GKVQEAVDVFERMDLYN---CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDV 101
G V VF+ + LY+ C+ + ++++ F A +M+MKD G V
Sbjct: 145 GGVDLPAKVFDAL-LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTV 203
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
+ + S GR ALR R M S N V++G+ G D EL +
Sbjct: 204 ESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQD 263
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
M ++N L+ G C+KG + + KL N + K G+ PN+ T+N I G CR
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
L A G + ++P+ VTYNT+I G ++ + MV +G+Q D TYN
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 282 IIDGYCKKGMVQDANRILKD 301
+I G CK+ + A + +K+
Sbjct: 384 LIFGLCKQAKTRKAAQFVKE 403
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 144/265 (54%), Gaps = 9/265 (3%)
Query: 37 AMRSYGRFGKVQEAVDVFER-MDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK 95
+ + + GK + A+ FE +D P++ +Y +++ L + G ++ + R++D+
Sbjct: 177 VISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDE 236
Query: 96 GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLA 155
G D Y+ I + + G AL R M G + + V+Y ++ G + G+ + A
Sbjct: 237 GFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEA 296
Query: 156 RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
L +M++ + P++ T+ ++ GLCK G + E+ L N++L G+ + F Y I G
Sbjct: 297 LGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDG 356
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
+CR+G L+RA LG + + G+ P ++TYNTVI GLC RV E++E V+ G+ D
Sbjct: 357 ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE-----VSKGVVGD 411
Query: 276 EFTYNTIIDGYCKKGMVQDANRILK 300
TY+T++D Y K VQ+ + +L+
Sbjct: 412 VITYSTLLDSYIK---VQNIDAVLE 433
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 17/269 (6%)
Query: 45 GKVQEAVDVFERM---------DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK 95
G++ A++V E M D + C + + I + G+F A D
Sbjct: 148 GEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESA-------VDS 200
Query: 96 GV-GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDL 154
GV ++ TYT + + C+ G+ L+R + G F+ V Y + G+++ G
Sbjct: 201 GVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVD 260
Query: 155 ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQ 214
A EM+E+ + DV +++ L+ GL K+G V E+ LL K++K GV PNL TY I+
Sbjct: 261 ALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIR 320
Query: 215 GLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQP 274
GLC+ G L+ A V + G+ D Y T+I G+CRK + + L M G+QP
Sbjct: 321 GLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQP 380
Query: 275 DEFTYNTIIDGYCKKGMVQDANRILKDAV 303
TYNT+I+G C G V +A+ + K V
Sbjct: 381 SILTYNTVINGLCMAGRVSEADEVSKGVV 409
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 136/252 (53%), Gaps = 11/252 (4%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS--DVYTYTIRIKSFCRTGRPHAAL 121
PS ++ +++ VE G + A +V M +K V D + + I FC+ G+P AL
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 122 RLLRNMSVFGCSF-NAVAYCTVVAGFYEFGD----RDLARELFDEMLERSLCPDVATFNK 176
+ G N V Y T+V+ + G RDL R L DE E D ++
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEF----DCVFYSN 247
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
+HG K G + ++ +++++G++ ++ +Y+I I GL +EG ++ A+ LG + +EG
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
+ P+++TY +I GLC+ ++ E+ +++++ G++ DEF Y T+IDG C+KG + A
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAF 367
Query: 297 RILKDAVFKGFK 308
+L D +G +
Sbjct: 368 SMLGDMEQRGIQ 379
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 6/205 (2%)
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
DV YTI I C+ G AL L G + N + Y +++ G + G A LF
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCRE 219
D + L P T+ L+ LCK+G ++EKLL+ ++ +G+ PN+ YN + G C+
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 220 GALDRAVVFLGSVSREGM---SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
G + A + VSR+ M +PD T +++I G C+K + E+ + + + D
Sbjct: 774 GQTEDA---MRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADF 830
Query: 277 FTYNTIIDGYCKKGMVQDANRILKD 301
F + +I G+C KG +++A +L++
Sbjct: 831 FGFLFLIKGFCTKGRMEEARGLLRE 855
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 127/249 (51%), Gaps = 8/249 (3%)
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
N + + N + +L + G F A +VYM M+ KG+ + + TI +K+ R A
Sbjct: 581 NSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGL-TVTFPSTI-LKTLVDNLRSLDA 638
Query: 121 LRLLRNMS-VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
L+ N S + + Y ++ G + G A L R + + T+N L++
Sbjct: 639 YLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLIN 698
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
GLC++G + E+ +L + + G+ P+ TY I I LC+EG A L S+ +G+ P
Sbjct: 699 GLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP 758
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+++ YN+++ G C+ + ++ + + + + PD FT +++I GYCKKG +++A
Sbjct: 759 NIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEAL--- 815
Query: 300 KDAVFKGFK 308
+VF FK
Sbjct: 816 --SVFTEFK 822
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 6/263 (2%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G V+EA+ + +M EP++ +Y AI+ L + G +A ++ R+ G+ D + Y
Sbjct: 291 GNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I CR G + A +L +M G + + Y TV+ G G A E+
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----S 405
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ + DV T++ L+ K + ++ + L+ + +L NI ++ GA
Sbjct: 406 KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGE 465
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A ++ ++PD TY T+I G C+ ++ E+ E +++ + YN IID
Sbjct: 466 ADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIID 524
Query: 285 GYCKKGMVQDANRILKDAVFKGF 307
CKKGM+ A +L + KG
Sbjct: 525 ALCKKGMLDTATEVLIELWEKGL 547
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 19/254 (7%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E YV + R G + A + M+ +PS+ +YN ++N L G ++A +V
Sbjct: 347 EFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-- 404
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
KGV DV TY+ + S+ + A L + R + V ++ F G
Sbjct: 405 ---SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMG 461
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
A L+ M E L PD AT+ ++ G CK G + E+ ++ N++ K VS + YN
Sbjct: 462 AYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYN 520
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV------------ICGLCRKSRVV 258
I LC++G LD A L + +G+ D+ T T+ I GL +
Sbjct: 521 RIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQL 580
Query: 259 ESEECLHKMVNDGL 272
S+ CL M+ND +
Sbjct: 581 NSDVCL-GMLNDAI 593
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 55/310 (17%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFER-------MDLYNCEPSVHSYNAIMNILVEFGYFNQA 85
Y + SY + + +++ R MDL C N ++ + G + +A
Sbjct: 414 TYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC-------NILLKAFLLMGAYGEA 466
Query: 86 HKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL---LRNMSVFGCSFNAVAYCTV 142
+Y M + + D TY IK +C+TG+ AL + LR SV AV Y +
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA----AVCYNRI 522
Query: 143 VAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGV 202
+ + G D A E+ E+ E+ L D+ T L+H + G L+ + +
Sbjct: 523 IDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNS 582
Query: 203 SPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM------------------------- 237
L N I LC+ G+ + A+ + R+G+
Sbjct: 583 DVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLV 642
Query: 238 ---------SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
S DV+ Y +I GLC++ +V++ + G+ + TYN++I+G C+
Sbjct: 643 VNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQ 702
Query: 289 KGMVQDANRI 298
+G + +A R+
Sbjct: 703 QGCLVEALRL 712
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 24/234 (10%)
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+YN+++N L + G +A +++ +++ G+ TY I I + C+ G A +LL +M
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
G N + Y ++V G+ + G + A + + + PD T + ++ G CKKG +
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDM 811
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
E+ + + + +S + F + I+G C +G ++ A
Sbjct: 812 EEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEAR--------------------- 850
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
GL R+ V ES L V+ L E +++ C++G V A +IL +
Sbjct: 851 --GLLREMLVSESVVKLINRVDAELAESESIRGFLVE-LCEQGRVPQAIKILDE 901
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + EA+ +F+ ++ PS +Y +++ L + G F A K+ M KG+ ++ Y
Sbjct: 704 GCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIY 763
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ +C+ G+ A+R++ + + +A +++ G+ + GD + A +F E +
Sbjct: 764 NSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKD 823
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF-----------TYNIFI 213
+++ D F L+ G C KG + E+ LL ++L L + F+
Sbjct: 824 KNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFL 883
Query: 214 QGLCREGALDRAVVFLGSVS 233
LC +G + +A+ L +S
Sbjct: 884 VELCEQGRVPQAIKILDEIS 903
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 80/189 (42%), Gaps = 29/189 (15%)
Query: 11 FNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
F E LL M + + N ++ + V+ Y + G+ ++A+ V R + P +
Sbjct: 741 FLDAEKLLDSMVSKGLVPNIIIYNSIVDG---YCKLGQTEDAMRVVSRKMMGRVTPDAFT 797
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
++++ + G +A V+ KDK + +D + + IK FC GR A LLR M
Sbjct: 798 VSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
V S + V V E + + R E LC++G VP
Sbjct: 858 V---SESVVKLINRVDA--ELAESESIRGFLVE-------------------LCEQGRVP 893
Query: 189 ESEKLLNKV 197
++ K+L+++
Sbjct: 894 QAIKILDEI 902
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 145/280 (51%), Gaps = 1/280 (0%)
Query: 30 LEGAYVEAMRSYGRFGKVQEAVDVFERMD-LYNCEPSVHSYNAIMNILVEFGYFNQAHKV 88
LE + A+ +Y R K+ A+ F+ M L + +P+V YN ++N V+ G ++A +
Sbjct: 156 LEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRF 215
Query: 89 YMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYE 148
Y RM + DV T+ I I +CR+ + AL L R M GC N V++ T++ GF
Sbjct: 216 YQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLS 275
Query: 149 FGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFT 208
G + ++ EM+E AT LV GLC++G V ++ L+ +L + V P+ F
Sbjct: 276 SGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFD 335
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV 268
Y ++ LC E RA+ + + ++G +P + T++ GL + R ++ + KM+
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMM 395
Query: 269 NDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
N G+ PD T+N ++ C DANR+ A KG++
Sbjct: 396 NAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYE 435
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 126/294 (42%), Gaps = 35/294 (11%)
Query: 32 GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMR 91
G Y + Y + G + +A+ ++RM +P V ++N ++N F+ A ++
Sbjct: 194 GVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFRE 253
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
MK+KG +V ++ I+ F +G+ +++ M GC F+ +V G G
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR 313
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLC----------------KKGFVP------- 188
D A L ++L + + P + LV LC KKG P
Sbjct: 314 VDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTT 373
Query: 189 ------------ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
++ + K++ G+ P+ T+N+ ++ LC A S +G
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
PD TY+ ++ G ++ R E E +++M++ + PD FTYN ++DG G
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 135/272 (49%), Gaps = 1/272 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEF-GYFNQAHKVYMRMKDKG 96
M G+ G+V+E +VF M ++ C P+V SYN ++ L E + ++ + +MK
Sbjct: 345 MNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS 404
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
V +TY+I I +C+T R AL LL M G AYC+++ + + A
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
ELF E+ E + ++ K G + E+ L N++ +G P+++ YN + G+
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
+ G ++ A L + G D+ ++N ++ G R + E + + G++PD
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
TYNT++ + GM ++A R++++ KGF+
Sbjct: 585 VTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 147/343 (42%), Gaps = 70/343 (20%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+++ L R + +M + E+ ++ E +++ GR V +A+ VF +
Sbjct: 132 LIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGR 191
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
C+P+ +YN+++ +L++ G + H+VY M ++G
Sbjct: 192 KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG------------------------ 227
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
C + + Y +++ + + G D A LFDEM + + P + L+
Sbjct: 228 ----------DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
K G V ++ L ++ + G SP ++TY I+GL + G +D A F + R+G++PD
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 241 -----------------------------------VVTYNTVICGLCR-KSRVVESEECL 264
VV+YNTVI L K+ V E
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWF 397
Query: 265 HKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
KM D + P EFTY+ +IDGYCK V+ A +L++ KGF
Sbjct: 398 DKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF 440
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 134/314 (42%), Gaps = 36/314 (11%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E Y + Y + GKV++A+D+FE M C P+V++Y ++ L + G ++A+ Y
Sbjct: 268 EKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYK 327
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF- 149
M G+ DV + + GR + M ++ C+ V+Y TV+ +E
Sbjct: 328 DMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESK 387
Query: 150 GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP----- 204
FD+M S+ P T++ L+ G CK V ++ LL ++ ++G P
Sbjct: 388 AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAY 447
Query: 205 -----------------NLF-------------TYNIFIQGLCREGALDRAVVFLGSVSR 234
LF Y + I+ + G L AV +
Sbjct: 448 CSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKN 507
Query: 235 EGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
+G PDV YN ++ G+ + + E+ L KM +G + D ++N I++G+ + G+ +
Sbjct: 508 QGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRR 567
Query: 295 ANRILKDAVFKGFK 308
A + + G K
Sbjct: 568 AIEMFETIKHSGIK 581
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
++ LG + + L E++ N+ Y ++ +G+ GK+ EAVD+F M
Sbjct: 450 LINALGKAKRYEAANELFKELKENF-GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
P V++YNA+M+ +V+ G N+A+ + +M++ G +D+ ++ I + F RTG P A
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+ + + G + V Y T++ F G + A + EM ++ D T++ ++
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Query: 181 L 181
+
Sbjct: 629 V 629
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 84/185 (45%)
Query: 32 GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMR 91
AY + + G+ + + A ++F+ + S Y ++ + G ++A ++
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
MK++G G DVY Y + + G + A LLR M GC + ++ ++ GF G
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
A E+F+ + + PD T+N L+ G E+ +++ ++ +G + TY+
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSS 624
Query: 212 FIQGL 216
+ +
Sbjct: 625 ILDAV 629
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 146/312 (46%), Gaps = 37/312 (11%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
A+ M SY R G++++A+ V M EP++ N +++ V +A + RM
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G+ +V TY I+ +C R A+ LL +M GC + V+Y T++ +
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 153 DLARELFDEML-ERSLCPDVATFNKL---------------------------------- 177
R+L +M E L PD T+N L
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 178 -VHGLCKKGFVPESEKLLNKVLKRG-VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE 235
VH LCK+G + E++ L+N++L +G P++ TY + G CR G +D+A L +
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 236 GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
G P+ V+Y ++ G+CR + +E+ E ++ P+ TY+ I+ G ++G + +A
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 543
Query: 296 NRILKDAVFKGF 307
++++ V KGF
Sbjct: 544 CDVVREMVLKGF 555
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 2/274 (0%)
Query: 32 GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMR 91
A V A+ GR + ++ ++ E + +C P V +Y A++N G ++A K+
Sbjct: 422 SAIVHALCKEGRMSEAKDLIN--EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQV 479
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
M G + +YT + CRTG+ A ++ S N++ Y ++ G G
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 539
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
A ++ EM+ + P N L+ LC+ G E+ K + + L +G + N+ +
Sbjct: 540 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 599
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
I G C+ LD A+ L + DV TY T++ L +K R+ E+ E + KM++ G
Sbjct: 600 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 659
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
+ P TY T+I YC+ G V D IL+ + +
Sbjct: 660 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 120/240 (50%), Gaps = 1/240 (0%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKG-VGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
Y+AI++ L + G ++A + M KG DV TYT + FCR G A +LL+ M
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
G N V+Y ++ G G ARE+ + E P+ T++ ++HGL ++G +
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
E+ ++ +++ +G P N+ +Q LCR+G A F+ +G + +VV + TV
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
I G C+ + + L M D FTY T++D KKG + +A ++K + KG
Sbjct: 601 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 129/303 (42%), Gaps = 6/303 (1%)
Query: 4 KLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCE 63
+ G E +M N+ SE N++ Y M R GK+ EA DV M L
Sbjct: 501 RTGKSLEAREMMNM-SEEHWWSPNSI---TYSVIMHGLRREGKLSEACDVVREMVLKGFF 556
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P N ++ L G ++A K +KG +V +T I FC+ AAL +
Sbjct: 557 PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSV 616
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
L +M + + Y T+V + G A EL +ML + + P T+ ++H C+
Sbjct: 617 LDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ 676
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G V + +L K++ R + YN I+ LC G L+ A LG V R D T
Sbjct: 677 MGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKT 734
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
++ G +K + + + +M N L PD + KG V +A++++ V
Sbjct: 735 CYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLV 794
Query: 304 FKG 306
+G
Sbjct: 795 ERG 797
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 127/291 (43%), Gaps = 39/291 (13%)
Query: 55 ERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRT 114
+R Y +P V Y +++ +L + + +V + MK +G+ ++ + S+ R
Sbjct: 198 DRQWRYRHDPMV--YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRA 255
Query: 115 GRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATF 174
G+ AL++L M G N + T + F + A + M + P+V T+
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 175 NKLVHG-----------------------------------LCKKGFVPESEKLLNKVLK 199
N ++ G LCK+ + E L+ K+ K
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 200 -RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVV 258
G+ P+ TYN I L + D A+ FL +G D + Y+ ++ LC++ R+
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 259 ESEECLHKMVNDG-LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
E+++ +++M++ G PD TY +++G+C+ G V A ++L+ G K
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK 486
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 142/273 (52%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
+ A+ ++ + GKV+EAV +F +M+ P+V ++N +++ L G +++A +M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
++G+ + TY+I +K R R A +L+ M+ G N + Y ++ F E G +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A E+ D M+ + L +T+N L+ G CK G +E+LL ++L G + N ++ I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
LC D A+ F+G + MSP T+I GLC+ + ++ E + +N G
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
D T N ++ G C+ G + +A RI K+ + +G
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 35/308 (11%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ R ++ +A V + M P+V YN +++ +E G N+A ++ M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYC------------ 140
KG+ TY IK +C+ G+ A RLL+ M G + N ++
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 141 -----------------------TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
T+++G + G A EL+ + L + D T N L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+HGLC+ G + E+ ++ ++L RG + +YN I G C + LD A +FL + + G+
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
PD TY+ +ICGL ++V E+ + +G+ PD +TY+ +IDG CK ++
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 298 ILKDAVFK 305
+ + K
Sbjct: 632 FFDEMMSK 639
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 36/258 (13%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
A+DVF + PS + N ++ LV F + + + + KGV DVY +T I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
+FC+ G+ A++ LF +M E + P
Sbjct: 269 AFCKGGKVEEAVK-----------------------------------LFSKMEEAGVAP 293
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
+V TFN ++ GL G E+ K+++RG+ P L TY+I ++GL R + A L
Sbjct: 294 NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL 353
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
++++G P+V+ YN +I + ++ E MV+ GL TYNT+I GYCK
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKN 413
Query: 290 GMVQDANRILKDAVFKGF 307
G +A R+LK+ + GF
Sbjct: 414 GQADNAERLLKEMLSIGF 431
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 114/236 (48%)
Query: 66 VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR 125
+ NA+++ L E G ++A ++ + +G D +Y I C + A L
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 126 NMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKG 185
M G + Y ++ G + + A + +D+ + PDV T++ ++ G CK
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 186 FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYN 245
E ++ ++++ + V PN YN I+ CR G L A+ + +G+SP+ TY
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 246 TVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
++I G+ SRV E++ +M +GL+P+ F Y +IDGY K G + +L++
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K+ EA + M +P ++Y+ ++ L +A + + K G+ DVYTY+
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
+ I C+ R M N V Y ++ + G +A EL ++M +
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P+ AT+ L+ G+ V E++ L ++ G+ PN+F Y I G + G + +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
L + + + P+ +TY +I G R V E+ L++M G+ PD TY I G
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 286 YCKKGMVQDA 295
Y K+G V +A
Sbjct: 795 YLKQGGVLEA 804
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 125/263 (47%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ EA + + + C SYN +++ ++A M +G+ D YTY
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+I I + A++ + G + Y ++ G + + +E FDEM+
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+++ P+ +N L+ C+ G + + +L + +G+SPN TY I+G+ ++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + + EG+ P+V Y +I G + ++V+ E L +M + + P++ TY +I
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 285 GYCKKGMVQDANRILKDAVFKGF 307
GY + G V +A+R+L + KG
Sbjct: 759 GYARDGNVTEASRLLNEMREKGI 781
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
LA ++F + + + P T N L+ L + + + + V K GVSP+++ + I
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAI 267
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
C+ G ++ AV + G++P+VVT+NTVI GL R E+ KMV G++
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
P TY+ ++ G + + DA +LK+ KGF
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF 361
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 78/159 (49%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y +R+Y R G++ A+++ E M P+ +Y +++ + +A ++ M+
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+G+ +V+ YT I + + G+ LLR M N + Y ++ G+ G+
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEK 192
A L +EM E+ + PD T+ + ++G K+G V E+ K
Sbjct: 768 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 142/273 (52%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
+ A+ ++ + GKV+EAV +F +M+ P+V ++N +++ L G +++A +M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
++G+ + TY+I +K R R A +L+ M+ G N + Y ++ F E G +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A E+ D M+ + L +T+N L+ G CK G +E+LL ++L G + N ++ I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
LC D A+ F+G + MSP T+I GLC+ + ++ E + +N G
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
D T N ++ G C+ G + +A RI K+ + +G
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 35/308 (11%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ R ++ +A V + M P+V YN +++ +E G N+A ++ M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYC------------ 140
KG+ TY IK +C+ G+ A RLL+ M G + N ++
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 141 -----------------------TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
T+++G + G A EL+ + L + D T N L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+HGLC+ G + E+ ++ ++L RG + +YN I G C + LD A +FL + + G+
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
PD TY+ +ICGL ++V E+ + +G+ PD +TY+ +IDG CK ++
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 298 ILKDAVFK 305
+ + K
Sbjct: 632 FFDEMMSK 639
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 36/258 (13%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
A+DVF + PS + N ++ LV F + + + + KGV DVY +T I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
+FC+ G+ A++ LF +M E + P
Sbjct: 269 AFCKGGKVEEAVK-----------------------------------LFSKMEEAGVAP 293
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
+V TFN ++ GL G E+ K+++RG+ P L TY+I ++GL R + A L
Sbjct: 294 NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL 353
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
++++G P+V+ YN +I + ++ E MV+ GL TYNT+I GYCK
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKN 413
Query: 290 GMVQDANRILKDAVFKGF 307
G +A R+LK+ + GF
Sbjct: 414 GQADNAERLLKEMLSIGF 431
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 114/236 (48%)
Query: 66 VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR 125
+ NA+++ L E G ++A ++ + +G D +Y I C + A L
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 126 NMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKG 185
M G + Y ++ G + + A + +D+ + PDV T++ ++ G CK
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 186 FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYN 245
E ++ ++++ + V PN YN I+ CR G L A+ + +G+SP+ TY
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 246 TVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
++I G+ SRV E++ +M +GL+P+ F Y +IDGY K G + +L++
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K+ EA + M +P ++Y+ ++ L +A + + K G+ DVYTY+
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
+ I C+ R M N V Y ++ + G +A EL ++M +
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P+ AT+ L+ G+ V E++ L ++ G+ PN+F Y I G + G + +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
L + + + P+ +TY +I G R V E+ L++M G+ PD TY I G
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 286 YCKKGMVQDA 295
Y K+G V +A
Sbjct: 795 YLKQGGVLEA 804
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 125/263 (47%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK+ EA + + + C SYN +++ ++A M +G+ D YTY
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+I I + A++ + G + Y ++ G + + +E FDEM+
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+++ P+ +N L+ C+ G + + +L + +G+SPN TY I+G+ ++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + + EG+ P+V Y +I G + ++V+ E L +M + + P++ TY +I
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 285 GYCKKGMVQDANRILKDAVFKGF 307
GY + G V +A+R+L + KG
Sbjct: 759 GYARDGNVTEASRLLNEMREKGI 781
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
LA ++F + + + P T N L+ L + + + + V K GVSP+++ + I
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAI 267
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
C+ G ++ AV + G++P+VVT+NTVI GL R E+ KMV G++
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
P TY+ ++ G + + DA +LK+ KGF
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF 361
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 78/159 (49%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y +R+Y R G++ A+++ E M P+ +Y +++ + +A ++ M+
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+G+ +V+ YT I + + G+ LLR M N + Y ++ G+ G+
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEK 192
A L +EM E+ + PD T+ + ++G K+G V E+ K
Sbjct: 768 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 140/279 (50%), Gaps = 4/279 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDL---YNCEPSVHSYNAIMNILVEFGYFNQAHKVY 89
+Y + + R G ++ A V E + + C+P + S+N++ N + ++ VY
Sbjct: 93 SYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VY 151
Query: 90 MRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF 149
M + K +V TY+ I +FC++G AL+ +M S N V + ++ G+ +
Sbjct: 152 MGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKA 211
Query: 150 GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTY 209
GD ++A L+ EM + +V T+ L+ G CKKG + +E++ +++++ V PN Y
Sbjct: 212 GDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVY 271
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
I G + G D A+ FL + +GM D+ Y +I GLC ++ E+ E + M
Sbjct: 272 TTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEK 331
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
L PD + T+++ Y K G ++ A + + +GF+
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 143/305 (46%), Gaps = 30/305 (9%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + + + G++Q A +++ RM EP+ Y I++ + G + A K +M
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
++G+ D+ Y + I C G+ A ++ +M + V + T++ +++ G
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHG------------------------------LC 182
A ++ +++ER PDV + ++ G LC
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALC 414
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K+G E E+L +K+ + G+ P+ F Y +I GLC++G L A + +EG+ D++
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
Y T+I GL K +VE+ + +M+N G+ PD ++ +I Y K+G + A+ +L D
Sbjct: 475 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Query: 303 VFKGF 307
+G
Sbjct: 535 QRRGL 539
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 133/305 (43%), Gaps = 30/305 (9%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + ++ + G++Q A+ F M P+V ++ +++ + G A +Y M
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ + +V TYT I FC+ G A + M N++ Y T++ GF++ GD
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS 284
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A + +ML + + D+ + ++ GLC G + E+ +++ + K + P++ +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICG---------------------- 250
+ + G + AV + G PDVV +T+I G
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV 404
Query: 251 --------LCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
LC++ +E E K+ GL PD+F Y + I G CK+G + DA ++
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Query: 303 VFKGF 307
V +G
Sbjct: 465 VQEGL 469
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 4/221 (1%)
Query: 84 QAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVV 143
+A + R++ D +T I + +L+ L + G + + ++ +VV
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 144 AGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG-- 201
+ + G A ++ M PDV ++N L+ G C+ G + + +L +
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 202 -VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
P++ ++N G + LD V++G V + SP+VVTY+T I C+ + +
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYMG-VMLKCCSPNVVTYSTWIDTFCKSGELQLA 182
Query: 261 EECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+ H M D L P+ T+ +IDGYCK G ++ A + K+
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 64/114 (56%)
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
V E+ + L+++ K P+ FT N I L ++ FL + G +P ++N+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
V+ +C+ +V +E+ +H M G +PD +YN++IDG+C+ G ++ A+ +L+
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLE 115
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 151/312 (48%), Gaps = 10/312 (3%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+ KL R F+ + LL EM ++ + +V +R +GR ++ + V + + +
Sbjct: 82 LFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKF 141
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMR-MKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+PS+ +N+I+++LV+ + A + + R M G+ DVYTY I +K T R
Sbjct: 142 GIKPSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGD 200
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
+LL+ M G + NAV Y T++ + G AR L EM E P+ TFN L+
Sbjct: 201 GFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILIS 256
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
C + + +S LL K G P++ T ++ LC EG + A+ L V +G
Sbjct: 257 AYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV 316
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA---- 295
DVV NT++ G C ++ ++ +M G P+ TYN +I GYC GM+ A
Sbjct: 317 DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTF 376
Query: 296 NRILKDAVFKGF 307
N + DA+ F
Sbjct: 377 NDMKTDAIRWNF 388
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 116/246 (47%), Gaps = 7/246 (2%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDK-GVGSDVYTYTIRIKSFCRTGRPHAALRL 123
S +Y A+ + L F F+ +++ M D G+ D + I+ F R + +
Sbjct: 75 SRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISV 134
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD-EMLERSLCPDVATFNKLVHGLC 182
+ +S FG + + +++ + D D+ARE F +M+ + DV T+ L+ GL
Sbjct: 135 VDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLS 193
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
+ + KLL + GV+PN YN + LC+ G + RA S+ E P+ V
Sbjct: 194 LTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRA----RSLMSEMKEPNDV 249
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
T+N +I C + ++++S L K + G PD T +++ C +G V +A +L+
Sbjct: 250 TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERV 309
Query: 303 VFKGFK 308
KG K
Sbjct: 310 ESKGGK 315
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 13/311 (4%)
Query: 1 MLQKLGHHREFNQMENLLSEMRAT--LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
+L L + + + +L+SEM+ + N+L AY K+ +++ + E+
Sbjct: 223 LLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQ-------KLIQSMVLLEKCF 275
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
P V + +M +L G ++A +V R++ KG DV +K +C G+
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A R M G N Y ++AG+ + G D A + F++M ++ + ATFN L+
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Query: 179 HGLCKKGFVPESEKLLNKVLKRGV--SPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
GL G + K+L + + YN I G +E + A+ FL + E
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFL--LKMEK 453
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
+ P V + + LC K + + + +M+ +G P + +I Y + G ++++
Sbjct: 454 LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESL 513
Query: 297 RILKDAVFKGF 307
++ D V +G+
Sbjct: 514 ELINDMVTRGY 524
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 135/332 (40%), Gaps = 46/332 (13%)
Query: 15 ENLLSEMRATLENNLLEGAYVEAM------RSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
E +SE LE +G V+ + + Y GK++ A F M+ P+V +
Sbjct: 296 EGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVET 355
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM- 127
YN ++ + G + A + MK + + T+ I+ GR L++L M
Sbjct: 356 YNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQ 415
Query: 128 ---SVFGCSFNAVAYCTVVAGFY---------------------------------EFGD 151
+V G + Y V+ GFY E G
Sbjct: 416 DSDTVHGARIDP--YNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGG 473
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
D + +D+M+ P + + L+H + G + ES +L+N ++ RG P T+N
Sbjct: 474 MDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNA 533
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
I G C++ + + F+ ++ G PD +YN ++ LC K + ++ +MV
Sbjct: 534 VIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKS 593
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
+ PD +++++ +K + N L+D +
Sbjct: 594 IVPDPSMWSSLMFCLSQKTAIH-VNSSLQDII 624
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 130/254 (51%), Gaps = 1/254 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R++ G++ EAV + M PS + N ++ I VE G A V+ M +GV
Sbjct: 154 LRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGV 213
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
D +Y + + R G+ A R L M G + ++ E G + A
Sbjct: 214 VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIW 273
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
F +M++ P++ F L+ GLCKKG + ++ ++L ++++ G PN++T+ I GLC
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333
Query: 218 REGALDRAV-VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
+ G ++A +FL V + P+V TY ++I G C++ ++ +E +M GL P+
Sbjct: 334 KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 393
Query: 277 FTYNTIIDGYCKKG 290
TY T+I+G+CK G
Sbjct: 394 NTYTTLINGHCKAG 407
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 135/252 (53%), Gaps = 1/252 (0%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM-KDKGVGSDVYT 103
G +++A ++ E M +P+V+++ A+++ L + G+ +A ++++++ + +V+T
Sbjct: 301 GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHT 360
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
YT I +C+ + + A L M G N Y T++ G + G A EL + M
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMG 420
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
+ P++ T+N + LCKK PE+ +LLNK G+ + TY I IQ C++ ++
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
+A+ F +++ G D+ N +I CR+ ++ ESE +V+ GL P + TY ++I
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 284 DGYCKKGMVQDA 295
YCK+G + A
Sbjct: 541 SCYCKEGDIDLA 552
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 129/268 (48%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + Y + K+ A +F RM P+V++Y ++N + G F +A+++ M
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM 419
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
D+G ++YTY I S C+ R A LL G + V Y ++ + D
Sbjct: 420 GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI 479
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ A F M + D+ N L+ C++ + ESE+L V+ G+ P TY
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSM 539
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I C+EG +D A+ + ++ R G PD TY ++I GLC+KS V E+ + M++ GL
Sbjct: 540 ISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILK 300
P E T T+ YCK+ +A +L+
Sbjct: 600 SPPEVTRVTLAYEYCKRNDSANAMILLE 627
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 109/191 (57%)
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
+++F GR + A+ ++ +M G + +++ V+ E G + A +FDEM R +
Sbjct: 154 LRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGV 213
Query: 168 CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVV 227
PD +++ +V G + G + E+++ L +++RG P+ T + + LC G ++RA+
Sbjct: 214 VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIW 273
Query: 228 FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
+ + G P+++ + ++I GLC+K + ++ E L +MV +G +P+ +T+ +IDG C
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333
Query: 288 KKGMVQDANRI 298
K+G + A R+
Sbjct: 334 KRGWTEKAFRL 344
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%)
Query: 146 FYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
F E G + A + +M + L P T N ++ + G + +E + +++ RGV P+
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216
Query: 206 LFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLH 265
+Y + + G R+G + A +L + + G PD T ++ LC V +
Sbjct: 217 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 276
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
KM++ G +P+ + ++IDG CKKG ++ A +L++ V G+K
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWK 319
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 6/265 (2%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y A+ S + + EA ++ + E +Y ++ + NQA + RM
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 489
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
G +D+ I I +FCR + + RL + + G Y ++++ + + GD
Sbjct: 490 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 549
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
DLA + F M PD T+ L+ GLCKK V E+ KL ++ RG+SP T
Sbjct: 550 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
C+ A++ L + ++ + T T++ LC + +V + K++
Sbjct: 610 AYEYCKRNDSANAMILLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDS 666
Query: 273 QPDEFT---YNTIIDGYCKKGMVQD 294
D T + T K +V D
Sbjct: 667 SADRVTLAAFTTACSESGKNNLVTD 691
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 128/232 (55%)
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
AI++ L + G A ++ M +KG+ +V TY I SFC +GR A +LLR+M
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
+ + V + ++ F + A E++ EML S+ P T+N ++ G CK+ V +
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
++++L+ + +G SP++ T++ I G C+ +D + + R G+ + VTY T+I
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
G C+ + +++ L++M++ G+ PD T++ ++ G C K ++ A IL+D
Sbjct: 194 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
A ++F M P+V +YN +++ G ++ A ++ M +K + D+ T++ I
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
+F + + A + + M + + Y +++ GF + D A+ + D M + P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
DV TF+ L++G CK V ++ ++ +RG+ N TY I G C+ G LD A L
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRV 257
+ G++PD +T++ ++ GLC K +
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKEL 236
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 110/222 (49%), Gaps = 5/222 (2%)
Query: 15 ENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAI 72
+NL +EM + N L +++ GR+ +A + M P + +++A+
Sbjct: 30 QNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS---DADQLLRHMIEKQINPDIVTFSAL 86
Query: 73 MNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGC 132
+N V+ ++A ++Y M + TY I FC+ R A R+L +M+ GC
Sbjct: 87 INAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC 146
Query: 133 SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEK 192
S + V + T++ G+ + D E+F EM R + + T+ L+HG C+ G + ++
Sbjct: 147 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQD 206
Query: 193 LLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
LLN+++ GV+P+ T++ + GLC + L +A L + +
Sbjct: 207 LLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 142/277 (51%), Gaps = 3/277 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGY-FNQAHKVYMR 91
+Y + ++ G+ +EAV+VF++M+ C+P++ +YN I+N+ + G +N+ + +
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHA-ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
MK G+ D YTY I + C+ G H A ++ M G S++ V Y ++ + +
Sbjct: 270 MKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
A ++ +EM+ P + T+N L+ + G + E+ +L N++ ++G P++FTY
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
+ G R G ++ A+ + G P++ T+N I + + E + ++
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
GL PD T+NT++ + + GM + + + K+ GF
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 35/290 (12%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
+G+ G E VF+ M P ++N +++ G F QA VY RM D GV D
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFY---EFG-DRDLAR 156
+ TY + + R G + ++L M C N + YC+++ + E G LA
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE 583
Query: 157 EL-------------------------------FDEMLERSLCPDVATFNKLVHGLCKKG 185
E+ F E+ ER PD+ T N +V ++
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 186 FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYN 245
V ++ +L+ + +RG +P++ TYN + R ++ L + +G+ PD+++YN
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYN 703
Query: 246 TVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
TVI CR +R+ ++ +M N G+ PD TYNT I Y M ++A
Sbjct: 704 TVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 6/250 (2%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
YG+ + +EA+ V M L PS+ +YN++++ G ++A ++ +M +KG D
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAREL-- 158
V+TYT + F R G+ +A+ + M GC N CT A +G+R E+
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI---CTFNAFIKMYGNRGKFTEMMK 440
Query: 159 -FDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
FDE+ L PD+ T+N L+ + G E + ++ + G P T+N I
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
R G+ ++A+ + G++PD+ TYNTV+ L R +SE+ L +M + +P+E
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL 560
Query: 278 TYNTIIDGYC 287
TY +++ Y
Sbjct: 561 TYCSLLHAYA 570
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 130/302 (43%), Gaps = 41/302 (13%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ +Y R G ++A+ V+ RM P + +YN ++ L G + Q+ KV M+D
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 98 GSDVYTYTIRIKSFCRTGR-----------------PHAAL------------------R 122
+ TY + ++ P A L R
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDL---ARELFDEMLERSLCPDVATFNKLVH 179
+ G S + ++V+ +G R + A + D M ER P +AT+N L++
Sbjct: 616 AFSELKERGFSPDITTLNSMVS---IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
+ +SE++L ++L +G+ P++ +YN I CR + A + G+ P
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
DV+TYNT I S E+ + M+ G +P++ TYN+I+DGYCK +A +
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 300 KD 301
+D
Sbjct: 793 ED 794
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 12/298 (4%)
Query: 13 QMENLLSEM-------RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPS 65
Q++++LSE+ + + LL A+++ + + +F A D F + Y
Sbjct: 115 QLDSVLSELFEPFKDKPESTSSELL--AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLD 172
Query: 66 VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR 125
I+++L + G + A ++ +++ G DVY+YT I +F +GR A+ + +
Sbjct: 173 NSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFK 232
Query: 126 NMSVFGCSFNAVAYCTVVAGFYEFG-DRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
M GC + Y ++ F + G + L ++M + PD T+N L+ CK+
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKR 291
Query: 185 GFV-PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + E+ ++ ++ G S + TYN + + A+ L + G SP +VT
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
YN++I R + E+ E ++M G +PD FTY T++ G+ + G V+ A I ++
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 138/339 (40%), Gaps = 70/339 (20%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + + R GKV+ A+ +FE M C+P++ ++NA + + G F + K++ +
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
G+ D+ T+ + F + G + + M G + T+++ + G
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ A ++ ML+ + PD++T+N ++ L + G +SEK+L ++ PN TY
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 213 IQG------------LCRE---GALDRAVVFLGS--------------------VSREGM 237
+ L E G ++ V L + + G
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 238 SPDVVTYNTVICGLCRKSRVV-----------------------------------ESEE 262
SPD+ T N+++ R+ V +SEE
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 263 CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
L +++ G++PD +YNT+I YC+ ++DA+RI +
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 44 FGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT 103
FGK +E + + +P + SYN ++ A +++ M++ G+ DV T
Sbjct: 680 FGKSEE---ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
Y I S+ A+ ++R M GC N Y ++V G+ + +D A+ LF E L
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK-LFVEDL 795
Query: 164 ERSLCP 169
R+L P
Sbjct: 796 -RNLDP 800
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 139/262 (53%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K+ EA +FE MD C P ++ ++++ L + G + A+KVY +M D ++ YT
Sbjct: 427 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 486
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
IK+F GR ++ ++M CS + T + ++ G+ + R +F+E+ R
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
PD +++ L+HGL K GF E+ +L + ++G + YNI I G C+ G +++A
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
L + +G P VVTY +VI GL + R+ E+ + + ++ + Y+++IDG
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 286 YCKKGMVQDANRILKDAVFKGF 307
+ K G + +A IL++ + KG
Sbjct: 667 FGKVGRIDEAYLILEELMQKGL 688
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 139/266 (52%), Gaps = 5/266 (1%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ G+ ++ +FE + P SY+ +++ L++ G+ N+ ++++ MK++G D
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
Y I I FC+ G+ + A +LL M G V Y +V+ G + D A LF+E
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ + +V ++ L+ G K G + E+ +L +++++G++PNL+T+N + L + +
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
+ A+V S+ +P+ VTY +I GLC+ + ++ +M G++P +Y T+
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 283 IDGYCKKGMVQDANRILKDAVFKGFK 308
I G K G + +A A+F FK
Sbjct: 769 ISGLAKAGNIAEAG-----ALFDRFK 789
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 147/310 (47%), Gaps = 6/310 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRA--TLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
M+ G +F++ +LL RA ++ + + + +R + GKV EA+ VFE M
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLR---KMGKVDEALKVFEEMK 370
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
+ P++ +YN ++++L G + A ++ M+ G+ +V T I + C++ +
Sbjct: 371 -KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A + M C+ + + +C+++ G + G D A +++++ML+ + + L+
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
G + K+ ++ + SP+L N ++ + + G ++ +
Sbjct: 490 KNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV 549
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
PD +Y+ +I GL + E+ E + M G D YN +IDG+CK G V A ++
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 299 LKDAVFKGFK 308
L++ KGF+
Sbjct: 610 LEEMKTKGFE 619
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 122/255 (47%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y ++++ G+ ++ +++ M NC P + N M+ + + G + ++ +K
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+ D +Y+I I + G + L +M GC + AY V+ GF + G +
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A +L +EM + P V T+ ++ GL K + E+ L + + + N+ Y+ I
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
G + G +D A + L + ++G++P++ T+N+++ L + + E+ C M
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724
Query: 274 PDEFTYNTIIDGYCK 288
P++ TY +I+G CK
Sbjct: 725 PNQVTYGILINGLCK 739
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 136/306 (44%), Gaps = 3/306 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+L + R F+ ++ +L EM + +E + + K++E DV + M +
Sbjct: 104 LLLVMARCRNFDALDQILGEMSVAGFGPSVNTC-IEMVLGCVKANKLREGYDVVQMMRKF 162
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
P+ +Y ++ + + ++ +M++ G V+ +T I+ F + GR +A
Sbjct: 163 KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
L LL M + V Y + F + G D+A + F E+ L PD T+ ++
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
LCK + E+ ++ + K P + YN I G G D A L +G P
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
V+ YN ++ L + +V E+ + +M D P+ TYN +ID C+ G + A L+
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFE-LR 400
Query: 301 DAVFKG 306
D++ K
Sbjct: 401 DSMQKA 406
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 43 RFGKVQEAVDVFE----RMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVG 98
R V A++ F R +L +C SYN+++ ++ F+ ++ M G G
Sbjct: 74 RLKDVNRAIEYFRWYERRTELPHCP---ESYNSLLLVMARCRNFDALDQILGEMSVAGFG 130
Query: 99 SDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAREL 158
V T + + + +++ M F AY T++ F D+ L
Sbjct: 131 PSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL 190
Query: 159 FDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCR 218
F +M E P V F L+ G K+G V + LL+++ + ++ YN+ I +
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 219 EGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFT 278
G +D A F + G+ PD VTY ++I LC+ +R+ E+ E + + P +
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 279 YNTIIDGYCKKGMVQDANRILKDAVFKG 306
YNT+I GY G +A +L+ KG
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 116/263 (44%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY + + + GKV +A + E M EP+V +Y ++++ L + ++A+ ++
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K K + +V Y+ I F + GR A +L + G + N + +++ + +
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ A F M E P+ T+ L++GLCK ++ ++ K+G+ P+ +Y
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I GL + G + A G PD YN +I GL +R +++ + GL
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Query: 273 QPDEFTYNTIIDGYCKKGMVQDA 295
T ++D K ++ A
Sbjct: 829 PIHNKTCVVLLDTLHKNDCLEQA 851
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y + +G+ G++ EA + E + P+++++N++++ LV+ N+A + MK
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+ + TY I I C+ + + A + M G + ++Y T+++G + G+
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A LFD PD A +N ++ GL ++ L + +RG+ + T + +
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Query: 214 QGLCREGALDRAVVFLGSVSRE 235
L + L++A + +G+V RE
Sbjct: 840 DTLHKNDCLEQAAI-VGAVLRE 860
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 95/206 (46%), Gaps = 3/206 (1%)
Query: 12 NQMENLLSEMRAT-LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYN 70
N+ LL EM+ E ++ Y + + ++ EA +FE E +V Y+
Sbjct: 604 NKAYQLLEEMKTKGFEPTVV--TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
++++ + G ++A+ + + KG+ ++YT+ + + + + AL ++M
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
C+ N V Y ++ G + + A + EM ++ + P ++ ++ GL K G + E+
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGL 216
L ++ G P+ YN I+GL
Sbjct: 782 GALFDRFKANGGVPDSACYNAMIEGL 807
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 121/247 (48%)
Query: 49 EAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRI 108
E +F+ +P + Y ++ L+ F++ + +M G+ S VY+Y I
Sbjct: 373 ETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVI 432
Query: 109 KSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC 168
C+ R A L M G S N V + T ++G+ GD + +++L
Sbjct: 433 DCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK 492
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
PDV TF+ +++ LC+ + ++ ++L+ G+ PN TYNI I+ C G DR+V
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
+ G+SPD+ YN I C+ +V ++EE L M+ GL+PD FTY+T+I +
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 289 KGMVQDA 295
G +A
Sbjct: 613 SGRESEA 619
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 137/339 (40%), Gaps = 70/339 (20%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
S+GR G + DVF ++ +PS YNA+++ LV+ + A+ + +M+ G
Sbjct: 154 SWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKP 213
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
D +TY I I C+ G A+RL++ M G N Y ++ GF G D A +
Sbjct: 214 DRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQL 273
Query: 160 DEMLERSLCPDVATFNKLVHGL------CK------------------------------ 183
+ M R L P+ AT VHG+ CK
Sbjct: 274 EMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNN 333
Query: 184 ---------------KGFVPESE-------------------KLLNKVLKRGVSPNLFTY 209
+G++P+S ++ + + RGV P Y
Sbjct: 334 SMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGY 393
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
+ +Q L +L + +G+ V +YN VI LC+ R+ + L +M +
Sbjct: 394 LVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQD 453
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
G+ P+ T+NT + GY +G V+ + +L+ + GFK
Sbjct: 454 RGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK 492
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 3/244 (1%)
Query: 35 VEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKD 94
V+A+ + RF E ++M + SV+SYNA+++ L + A M+D
Sbjct: 397 VQALLNAQRFS---EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQD 453
Query: 95 KGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDL 154
+G+ ++ T+ + + G +L + V G + + + ++ +
Sbjct: 454 RGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKD 513
Query: 155 ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQ 214
A + F EMLE + P+ T+N L+ C G S KL K+ + G+SP+L+ YN IQ
Sbjct: 514 AFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQ 573
Query: 215 GLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQP 274
C+ + +A L ++ R G+ PD TY+T+I L R E+ E + G P
Sbjct: 574 SFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633
Query: 275 DEFT 278
D +T
Sbjct: 634 DSYT 637
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 111/250 (44%), Gaps = 10/250 (4%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P ++NA M+ L++ + +++ +GV Y + +++ R R
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 124 LRNMSVFGC-----SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
L+ M V G S+NAV C A E A EM +R + P++ TFN +
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIEN-----AAMFLTEMQDRGISPNLVTFNTFL 467
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
G +G V + +L K+L G P++ T+++ I LCR + A + G+
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
P+ +TYN +I C S + KM +GL PD + YN I +CK V+ A +
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 299 LKDAVFKGFK 308
LK + G K
Sbjct: 588 LKTMLRIGLK 597
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 5/249 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYV--EAMRSYGRFGKVQEAVDVFERMD 58
++Q L + + F++ + L +M + LL Y + + +++ A M
Sbjct: 396 LVQALLNAQRFSEGDRYLKQMGV---DGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
P++ ++N ++ G + H V ++ G DV T+++ I CR
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIK 512
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A + M +G N + Y ++ GD D + +LF +M E L PD+ +N +
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
CK V ++E+LL +L+ G+ P+ FTY+ I+ L G A S+ R G
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCV 632
Query: 239 PDVVTYNTV 247
PD T V
Sbjct: 633 PDSYTKRLV 641
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 99/234 (42%)
Query: 74 NILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCS 133
N L G + ++ ++D G + I S+ R G + +S G
Sbjct: 118 NALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK 177
Query: 134 FNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKL 193
+ Y V+ + DLA F +M PD T+N L+HG+CKKG V E+ +L
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 194 LNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCR 253
+ ++ + G PN+FTY I I G G +D A+ L + ++P+ T T + G+ R
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 254 KSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
++ E L + Y+ ++ M ++ + L+ +G+
Sbjct: 298 CLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGY 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ Y G V++ V E++ ++ +P V +++ I+N L A + M + G+
Sbjct: 467 LSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI 526
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+ TY I I+S C TG +++L M G S + AY + F + A E
Sbjct: 527 EPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEE 586
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
L ML L PD T++ L+ L + G E+ ++ + + + G P+ +T + +
Sbjct: 587 LLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDL 646
Query: 218 REGALDRAVV 227
R+ L R V
Sbjct: 647 RKSGLSRETV 656
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 137/271 (50%), Gaps = 1/271 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
M Y + G + +++ VFE++ +P + + ++N LV+ + K++ +M GV
Sbjct: 140 MIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGV 199
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
++++ Y + + + ++G P A +LL M G + Y T+++ + + A
Sbjct: 200 VANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALS 259
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ D M + P++ T+N +HG ++G + E+ +L ++ K V+ N TY I G C
Sbjct: 260 VQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYC 318
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
R +D A+ + G SP VVTYN+++ LC R+ E+ L +M ++PD
Sbjct: 319 RMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNI 378
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
T NT+I+ YCK + A ++ K + G K
Sbjct: 379 TCNTLINAYCKIEDMVSAVKVKKKMIESGLK 409
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%)
Query: 53 VFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFC 112
+F++M ++H YN +++ + G +A K+ M++KGV D++TY I +C
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 113 RTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVA 172
+ AL + M G + N V Y + + GF G A LF E ++ + +
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHV 308
Query: 173 TFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV 232
T+ L+ G C+ + E+ +L + RG SP + TYN ++ LC +G + A L +
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 233 SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
S + + PD +T NT+I C+ +V + + KM+ GL+ D ++Y +I G+CK +
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 293 QDANRILKDAVFKGF 307
++A L + KGF
Sbjct: 429 ENAKEELFSMIEKGF 443
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 141/301 (46%), Gaps = 19/301 (6%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M+ L H+ F LL ++ + LL V +RS G V E
Sbjct: 86 MILILTKHKHFKTAHQLLDKLA---QRELLSSPLV--LRSL--VGGVSE----------- 127
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+ E H ++ +M + G N + V+ +++ G+ + T+ + S +
Sbjct: 128 DPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTV 187
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
++ + M G N Y +V + GD + A +L EM E+ + PD+ T+N L+
Sbjct: 188 WKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
CKK E+ + +++ + GV+PN+ TYN FI G REG + A + ++ ++ +
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTAN 306
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
VTY T+I G CR + + E+ M + G P TYN+I+ C+ G +++ANR+L
Sbjct: 307 HVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLT 366
Query: 301 D 301
+
Sbjct: 367 E 367
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 1/266 (0%)
Query: 42 GRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDV 101
+ G ++A + M+ P + +YN ++++ + +A V RM+ GV ++
Sbjct: 214 SKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNI 273
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
TY I F R GR A RL R + + N V Y T++ G+ D D A L +
Sbjct: 274 VTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREV 332
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
M R P V T+N ++ LC+ G + E+ +LL ++ + + P+ T N I C+
Sbjct: 333 MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIED 392
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
+ AV + G+ D+ +Y +I G C+ + ++E L M+ G P TY+
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 282 IIDGYCKKGMVQDANRILKDAVFKGF 307
++DG+ + + ++L++ +G
Sbjct: 453 LVDGFYNQNKQDEITKLLEEFEKRGL 478
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + Y R + EA+ + E M+ P V +YN+I+ L E G +A+++ M
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K + D T I ++C+ +A+++ + M G + +Y ++ GF + +
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ A+E M+E+ P AT++ LV G + E KLL + KRG+ ++ Y
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I+ +C+ +D A V S+ ++G+ D V + T+ R +V E+ M N L
Sbjct: 489 IRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRL 548
Query: 273 QPDEFTYNTIIDGYC 287
+ Y +I Y
Sbjct: 549 MVNLKLYKSISASYA 563
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 1/259 (0%)
Query: 49 EAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRI 108
EA+ V +RM+ P++ +YN+ ++ G +A +++ +KD + V TYT I
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV-TYTTLI 314
Query: 109 KSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC 168
+CR ALRL M G S V Y +++ E G A L EM + +
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
PD T N L++ CK + + K+ K+++ G+ ++++Y I G C+ L+ A
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEE 434
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
L S+ +G SP TY+ ++ G +++ E + L + GL D Y +I CK
Sbjct: 435 LFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICK 494
Query: 289 KGMVQDANRILKDAVFKGF 307
V A + + KG
Sbjct: 495 LEQVDYAKVLFESMEKKGL 513
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 137/266 (51%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R G+V+++ + + + +P ++YN I+N V+ F+ V MK GV +
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
TYT+ ++ + G+ A +L M G + Y ++++ G+ A LFDE+
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
E+ L P T+ L+ G+CK G + +E L+N++ +GV+ +N I G CR+G +
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
D A + + ++G DV T NT+ R R E+++ L +M+ G++ +Y +
Sbjct: 416 DEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNL 475
Query: 283 IDGYCKKGMVQDANRILKDAVFKGFK 308
ID YCK+G V++A R+ + KG +
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSKGVQ 501
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 144/303 (47%), Gaps = 5/303 (1%)
Query: 7 HHREFNQMENLLSEMR--ATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
R+F+ +E +L M+ + N + Y M + GK+ +A +F+ M E
Sbjct: 271 KQRDFSGVEGVLKVMKKDGVVYNKV---TYTLLMELSVKNGKMSDAEKLFDEMRERGIES 327
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
VH Y ++++ G +A ++ + +KG+ YTY I C+ G AA L+
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
M G + V + T++ G+ G D A ++D M ++ DV T N + +
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
E+++ L ++++ GV + +Y I C+EG ++ A +S +G+ P+ +TY
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY 507
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVF 304
N +I C++ ++ E+ + M +G+ PD +TY ++I G C V +A R+ +
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGL 567
Query: 305 KGF 307
KG
Sbjct: 568 KGL 570
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 118/222 (53%)
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
+++ RM D GV VY+ TI ++ CR G + +L++ SV G A Y T++ +
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY 269
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
+ D + M + + + T+ L+ K G + ++EKL +++ +RG+ ++
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
Y I CR+G + RA + ++ +G+SP TY +I G+C+ + +E +++
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
M + G+ + +NT+IDGYC+KGMV +A+ I KGF+
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 10 EFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSY 69
E E L++EM++ N+ + + + Y R G V EA +++ M+ + V +
Sbjct: 379 EMGAAEILMNEMQSK-GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTC 437
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
N I + +++A + RM + GV +YT I +C+ G A RL MS
Sbjct: 438 NTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
G NA+ Y ++ + + G AR+L M + PD T+ L+HG C V E
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDE 557
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
+ +L +++ +G+ N TY + I GL + G D A + R+G + D Y +I
Sbjct: 558 AMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
+N +++ G ++A +Y M+ KG +DV+T F R R A + L M
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G + V+Y ++ + + G+ + A+ LF EM + + P+ T+N +++ CK+G +
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E+ KL + G+ P+ +TY I G C +D A+ + +G+ + VTY +I
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
GL + + E+ +M G D Y +I
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%)
Query: 72 IMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFG 131
+ + V+ G F + +V+ M KG+ D + + + + + R L + R M G
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 132 CSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESE 191
+ VV G G+ + +++L E + + P+ T+N +++ K+ E
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 192 KLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGL 251
+L + K GV N TY + ++ + G + A + G+ DV Y ++I
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 252 CRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
CRK + + ++ GL P +TY +IDG CK G + A ++ + KG
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG 394
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 125/258 (48%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
A +V M P SYN ++ G A M +G+ YTY I
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
+ AA L+R + G ++V Y ++ G+ + GD A L DEM+ + P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
T+ L++ LC+K E+++L KV+ +G+ P+L N + G C G +DRA L
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
+ ++PD VTYN ++ GLC + + E+ E + +M G++PD +YNT+I GY KK
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 290 GMVQDANRILKDAVFKGF 307
G + A + + + GF
Sbjct: 551 GDTKHAFMVRDEMLSLGF 568
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 124/249 (49%), Gaps = 3/249 (1%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
V EA++ F M P + N I+ +L A Y M + S+VYT+ I
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I C+ G+ A L M VFG V Y T+V GF G + AR + EM +
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
PD+ T+N ++ +C +G E +L ++ + G+ P+ +YNI I+G G L+ A
Sbjct: 291 FQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
+ + ++GM P TYNT+I GL ++++ +E + ++ G+ D TYN +I+GY
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 287 CKKGMVQDA 295
C+ G + A
Sbjct: 408 CQHGDAKKA 416
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 138/295 (46%), Gaps = 38/295 (12%)
Query: 42 GRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHK-------------- 87
R +++ A + M + +V+++N ++N+L + G +A
Sbjct: 201 SRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTI 260
Query: 88 ---------------------VYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRN 126
+ MK KG D+ TY + C GR A +LR
Sbjct: 261 VTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLRE 317
Query: 127 MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF 186
M G ++V+Y ++ G GD ++A DEM+++ + P T+N L+HGL +
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 377
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
+ +E L+ ++ ++G+ + TYNI I G C+ G +A + +G+ P TY +
Sbjct: 378 IEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTS 437
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+I LCRK++ E++E K+V G++PD NT++DG+C G + A +LK+
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 116/244 (47%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P+ ++YN +++ L A + +++KG+ D TY I I +C+ G A L
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
M G Y +++ A ELF++++ + + PD+ N L+ G C
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + + LL ++ ++P+ TYN ++GLC EG + A +G + R G+ PD ++
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
YNT+I G +K + +M++ G P TYN ++ G K + A +L++
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Query: 304 FKGF 307
+G
Sbjct: 600 SEGI 603
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 110/218 (50%)
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+YN ++N + G +A ++ M G+ +TYT I CR + A L +
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
G + V T++ G G+ D A L EM S+ PD T+N L+ GLC +G
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
E+ +L+ ++ +RG+ P+ +YN I G ++G A + + G +P ++TYN +
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ GL + +EE L +M ++G+ P++ ++ ++I+
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + G ++A + + M +P+ +Y +++ +L +A +++ ++ KG+ D
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+ + C G A LL+ M + + + V Y ++ G G + AREL
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
EM R + PD ++N L+ G KKG + + +++L G +P L TYN ++GL +
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVI 248
+ A L + EG+ P+ ++ +VI
Sbjct: 587 EGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%)
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A E F M E+ P T N ++ L + + + + + + N++T+NI
Sbjct: 172 DEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIM 231
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I LC+EG L +A FLG + G+ P +VTYNT++ G + R+ + + +M + G
Sbjct: 232 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 291
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKD 301
QPD TYN I+ C +G + R +K+
Sbjct: 292 QPDMQTYNPILSWMCNEGRASEVLREMKE 320
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 156 RELFDEML---ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
R LFDE++ +R F+ LV C+ V E+ + + ++G P T N
Sbjct: 137 RNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHI 196
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ L R ++ A VF + R + +V T+N +I LC++ ++ +++ L M G+
Sbjct: 197 LTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGI 256
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+P TYNT++ G+ +G ++ A I+ + KGF+
Sbjct: 257 KPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
M + G + A + + MD+ + P +YN +M L G F +A ++ MK +G+
Sbjct: 474 MDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
D +Y I + + G A + M G + + Y ++ G + + +LA E
Sbjct: 534 KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEE 593
Query: 158 LFDEMLERSLCPDVATFNKLVHGL 181
L EM + P+ ++F ++ +
Sbjct: 594 LLREMKSEGIVPNDSSFCSVIEAM 617
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 139/262 (53%), Gaps = 1/262 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
++ Y G V+ A+ VF+ M Y PS+ S N++++ LV G A VY +M V
Sbjct: 162 LKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEV 221
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNM-SVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
DV+T +I + ++CR+G A+ + S G N V Y +++ G+ GD +
Sbjct: 222 SPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMT 281
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
+ M ER + +V T+ L+ G CKKG + E+E + + ++ + + Y + + G
Sbjct: 282 RVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGY 341
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
CR G + AV ++ G+ + N++I G C+ ++VE+E+ +M + L+PD
Sbjct: 342 CRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 401
Query: 277 FTYNTIIDGYCKKGMVQDANRI 298
TYNT++DGYC+ G V +A ++
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKL 423
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 142/285 (49%), Gaps = 8/285 (2%)
Query: 23 ATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYF 82
T+ N+L+ G Y + G++ EA +F RM+ ++ +P H+YN +++ GY
Sbjct: 366 TTICNSLING--------YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV 417
Query: 83 NQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTV 142
++A K+ +M K V V TY I +K + R G H L L + M G + + ++ T+
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTL 477
Query: 143 VAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGV 202
+ ++ GD + A +L++ +L R L D T N ++ GLCK V E++++L+ V
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 203 SPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE 262
P + TY G + G L A + R+G+ P + YNT+I G + + + +
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 263 CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+ ++ GL P TY +I G+C GM+ A + + KG
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 139/283 (49%), Gaps = 2/283 (0%)
Query: 19 SEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVE 78
+E LE N++ Y + Y G V+ V M +V +Y +++ +
Sbjct: 251 TESSLGLELNVV--TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCK 308
Query: 79 FGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVA 138
G +A V+ +K+K + +D + Y + + +CRTG+ A+R+ NM G N
Sbjct: 309 KGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTI 368
Query: 139 YCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVL 198
+++ G+ + G A ++F M + SL PD T+N LV G C+ G+V E+ KL +++
Sbjct: 369 CNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMC 428
Query: 199 KRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVV 258
++ V P + TYNI ++G R GA + + + G++ D ++ +T++ L +
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 488
Query: 259 ESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
E+ + ++ GL D T N +I G CK V +A IL +
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 137/307 (44%), Gaps = 41/307 (13%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + G ++EA V E M+ P++ YN +++ ++ + N+ + + ++ +G+
Sbjct: 551 YYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAG--------------F 146
V TY I +C G A M G + N V C+ +A
Sbjct: 611 VATYGALITGWCNIGMIDKAYATCFEMIEKGITLN-VNICSKIANSLFRLDKIDEACLLL 669
Query: 147 YEFGDRDL---ARELFDEMLERS----------------------LCPDVATFNKLVHGL 181
+ D DL + E LE S L P+ +N + GL
Sbjct: 670 QKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGL 729
Query: 182 CKKGFVPESEKLLNKVLKRG-VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
CK G + ++ KL + +L P+ +TY I I G G +++A ++ +G+ P+
Sbjct: 730 CKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPN 789
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+VTYN +I GLC+ V ++ LHK+ G+ P+ TYNT+IDG K G V +A R+ +
Sbjct: 790 IVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKE 849
Query: 301 DAVFKGF 307
+ KG
Sbjct: 850 KMIEKGL 856
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 3/259 (1%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD--VYTYTIR 107
A+ V+++M + P V + + ++N G ++A V+ + + +G + V TY
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSL 267
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
I + G R+LR MS G S N V Y +++ G+ + G + A +F+ + E+ L
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKL 327
Query: 168 CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVV 227
D + L+ G C+ G + ++ ++ + +++ GV N N I G C+ G L A
Sbjct: 328 VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQ 387
Query: 228 FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
++ + PD TYNT++ G CR V E+ + +M + P TYN ++ GY
Sbjct: 388 IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
Query: 288 KKGMVQDANRILKDAVFKG 306
+ G D + K + +G
Sbjct: 448 RIGAFHDVLSLWKMMLKRG 466
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 129/302 (42%), Gaps = 38/302 (12%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
++ Y R G + + +++ M S + ++ L + G FN+A K++ + +G+
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+D T + I C+ + + A +L N+++F C Y + G+Y+ G+ A
Sbjct: 503 LTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFA 562
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ + M + + P + +N L+ G K + + L+ ++ RG++P + TY I G C
Sbjct: 563 VKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWC 622
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN-----DGL 272
G +D+A + +G++ +V + + L R ++ E+ L K+V+ G
Sbjct: 623 NIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGY 682
Query: 273 Q---------------------------------PDEFTYNTIIDGYCKKGMVQDANRIL 299
Q P+ YN I G CK G ++DA ++
Sbjct: 683 QSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLF 742
Query: 300 KD 301
D
Sbjct: 743 SD 744
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 133 SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEK 192
SF+ + ++ + E G A +FD M P + + N L+ L +KG +
Sbjct: 152 SFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALH 211
Query: 193 LLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV-SREGMSPDVVTYNTVICGL 251
+ ++++ VSP++FT +I + CR G +D+A+VF S G+ +VVTYN++I G
Sbjct: 212 VYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGY 271
Query: 252 CRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
V L M G+ + TY ++I GYCKKG++++A + +
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 3 QKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNC 62
QK+ E + + LL + NN++ Y A+ + GK+++A +F DL +
Sbjct: 700 QKIAESVENSTPKKLL------VPNNIV---YNVAIAGLCKAGKLEDARKLFS--DLLSS 748
Query: 63 E---PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+ P ++Y +++ G N+A + M KG+ ++ TY IK C+ G
Sbjct: 749 DRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
A RLL + G + NA+ Y T++ G + G+ A L ++M+E+ L
Sbjct: 809 AQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 144/304 (47%), Gaps = 2/304 (0%)
Query: 5 LGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
L H R+ + +++E + L Y + + + G++++A + M CEP
Sbjct: 194 LCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEP 253
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR-L 123
+ +YN ++N + +A V M G+ D Y+Y +K CR P +
Sbjct: 254 DLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM 313
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
++ M G + V+Y T++ F + A LF+EM ++ + +V T+ L+ +
Sbjct: 314 VKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR 372
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
+G ++KLL+++ + G+SP+ Y + LC+ G +D+A + ++PD ++
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAIS 432
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
YN++I GLCR RV E+ + M PDE T+ II G + + A ++ +
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM 492
Query: 304 FKGF 307
KGF
Sbjct: 493 DKGF 496
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 1/277 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY + + + G + AV VF+ M + YN + +LV F A +Y M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K G +TY+ I C+ + LL +M G + A+ +
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A + F M++R PDV ++ L++GL + G V ++ ++ N +++ GVSP+
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 213 IQGLCREGALDRAVVFLGS-VSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
+ GLC +D A + + + V YN +I G C+ R+ ++E M G
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+PD TYN +++ Y M++ A ++ + V G +
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQ 287
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%)
Query: 66 VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR 125
V SY+ ++ +A++++ M+ KG+ +V TYT IK+F R G A +LL
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 126 NMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKG 185
M+ G S + + Y T++ + G+ D A +F++M+E + PD ++N L+ GLC+ G
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 186 FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYN 245
V E+ KL + + P+ T+ I GL R L A + +G + D +
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504
Query: 246 TVICGLCRKS 255
T+I C S
Sbjct: 505 TLIKASCSMS 514
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 95 KGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS-----VFGCSFNAVAYCTVVAGFYEF 149
+ +G+ Y RI + ++G A+++ M VF +N V +E
Sbjct: 3 QTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFE- 61
Query: 150 GDRDLARELFDEM--LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
LA ++ +M + SL P T+++ + GLCK + LL+ + G P+++
Sbjct: 62 ----LAEAIYWDMKPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIW 115
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
+N+++ LCRE + AV + + G PDVV+Y +I GL R +V ++ E + M
Sbjct: 116 AFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAM 175
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
+ G+ PD ++ G C V A ++ + +
Sbjct: 176 IRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEI 211
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%)
Query: 137 VAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNK 196
+AY + +A + G D A ++FDEM S +N+ + L ++ +E +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 197 VLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSR 256
+ G S FTY+ FI GLC+ D L + G PD+ +N + LCR+++
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 257 VVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
V + + MV G +PD +Y +I+G + G V DA I + G
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG 179
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 90/189 (47%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y + ++ R ++A +FE M +V +Y +++ + G + A K+ +M
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G+ D YT + C++G A + +M + +A++Y ++++G G
Sbjct: 387 TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRV 446
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A +LF++M + CPD TF ++ GL + + + K+ ++++ +G + + +
Sbjct: 447 TEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTL 506
Query: 213 IQGLCREGA 221
I+ C A
Sbjct: 507 IKASCSMSA 515
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 2/308 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M+ L R+F + L+ EMR T + +V MR + V++AV+V + M Y
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKY 196
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
EP + + +++ L + G +A KV+ M++K ++ +T + +CR G+ A
Sbjct: 197 GLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEA 255
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+L M G + V + +++G+ G A +L ++M +R P+V + L+
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQA 315
Query: 181 LCK-KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
LC+ + + E+ ++ ++ + G ++ TY I G C+ G +D+ L + ++G+ P
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMP 375
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
VTY ++ +K + E E + KM G PD YN +I CK G V++A R+
Sbjct: 376 SQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 435
Query: 300 KDAVFKGF 307
+ G
Sbjct: 436 NEMEANGL 443
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 142/301 (47%), Gaps = 5/301 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+L L + + + +MR NL + + + R GK+ EA +V +M
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPPNL--RYFTSLLYGWCREGKLMEAKEVLVQMKEA 265
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRT-GRPHA 119
EP + + +++ G A+ + M+ +G +V YT+ I++ CRT R
Sbjct: 266 GLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDE 325
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A+R+ M +GC + V Y +++GF ++G D + D+M ++ + P T+ +++
Sbjct: 326 AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMV 385
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
KK E +L+ K+ +RG P+L YN+ I+ C+ G + AV + G+SP
Sbjct: 386 AHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSP 445
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGL--QPDEFTYNTIIDGYCKKGMVQDANR 297
V T+ +I G + ++E+ +MV+ G+ P T ++++ + ++ A
Sbjct: 446 GVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKD 505
Query: 298 I 298
+
Sbjct: 506 V 506
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 174 FNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVS 233
F L+ V ++ ++L+++ K G+ P+ + + + LC+ G++ A +
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM- 228
Query: 234 REGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQ 293
RE P++ + +++ G CR+ +++E++E L +M GL+PD + ++ GY G +
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 294 DANRILKDAVFKGFK 308
DA ++ D +GF+
Sbjct: 289 DAYDLMNDMRKRGFE 303
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y++ M ++ + + +E +++ E+M C P + YN ++ + + G +A +++ M
Sbjct: 379 TYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEM 438
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G+ V T+ I I F G A + M G F+A Y T+ +
Sbjct: 439 EANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI-FSAPQYGTLKSLLNNLVRD 497
Query: 153 D---LARELFDEMLER-SLCP-DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
D +A++++ + + S C +V+ + +H L KG V E+ +++ + P
Sbjct: 498 DKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPN 557
Query: 208 TYNIFIQGL 216
TY ++GL
Sbjct: 558 TYAKLMKGL 566
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 126/271 (46%), Gaps = 16/271 (5%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK ++A V M P +Y+ ++N L A ++ MK G+ +DVYTY
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
TI + SFC+ G A + M GC+ N V Y ++ + + A ELF+ ML
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 165 RSLCPDVATFNKLVHGLCKKGF----------------VPESEKLLNKVLKRGVSPNLFT 208
P++ T++ L+ G CK G VP+ + + PN+ T
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV 268
Y + G C+ ++ A L ++S EG P+ + Y+ +I GLC+ ++ E++E +M
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 269 NDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
G +TY+++ID Y K A+++L
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 16/285 (5%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + +Y + KV A ++FE M C P++ +Y+A+++ + G +A +++ RM
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 93 ----------------KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNA 136
D +V TY + FC++ R A +LL MS+ GC N
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Query: 137 VAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNK 196
+ Y ++ G + G D A+E+ EM E + T++ L+ K + K+L+K
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 197 VLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSR 256
+L+ +PN+ Y I GLC+ G D A + + +G P+VVTY +I G +
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 257 VVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+ E L +M + G+ P+ TY +ID CK G + A+ +L++
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 2/256 (0%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+V+EA + + M + CEP+ Y+A+++ L + G ++A +V M + G + +YTY+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I + + R A ++L M C+ N V Y ++ G + G D A +L M E+
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
P+V T+ ++ G G + +LL ++ +GV+PN TY + I C+ GALD A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
L + + Y VI G ++ +ES L ++ D P Y +ID
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDN 891
Query: 286 YCKKGMVQDANRILKD 301
K ++ A R+L++
Sbjct: 892 LIKAQRLEMALRLLEE 907
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 136/291 (46%), Gaps = 21/291 (7%)
Query: 15 ENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERM---------DLY----- 60
E +LSE L N + A ++ + + G+V++A +FERM D+Y
Sbjct: 577 ETMLSE--GCLPNIVTYSALIDG---HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 61 -NCE-PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
N E P+V +Y A+++ + +A K+ M +G + Y I C+ G+
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A + MS G Y +++ +++ +DLA ++ +MLE S P+V + +++
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
GLCK G E+ KL+ + ++G PN+ TY I G G ++ + L + +G++
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
P+ VTY +I C+ + + L +M Y +I+G+ K+
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 11/298 (3%)
Query: 11 FNQMENLLSEMRAT--LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
F + + L+ MRAT L N + + + + G+ + V M + C PS
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR---VLNMMMMEGCYPSPKI 374
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP------HAALR 122
+N++++ G + A+K+ +M G Y I I S C A +
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
M G N + + G + A + EM+ + PD +T++K+++ LC
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
+ + L ++ + G+ +++TY I + C+ G +++A + + G +P+VV
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
TY +I + +V + E M+++G P+ TY+ +IDG+CK G V+ A +I +
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 142/304 (46%), Gaps = 16/304 (5%)
Query: 2 LQKLGHHREFNQMENLLSE--MRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
L K+G E +++ +SE ATL Y + Y + + A V +M
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYT------YSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
+C P+V Y +++ L + G ++A+K+ M++KG +V TYT I F G+
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 797
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
L LL M G + N V Y ++ + G D+A L +EM + A + K++
Sbjct: 798 CLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE 857
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
G K F+ ES LL+++ + +P L Y + I L + L+ A+ L V+ S
Sbjct: 858 GF-NKEFI-ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSA 913
Query: 240 DVV----TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+V TYN++I LC ++V + + +M G+ P+ ++ ++I G + + +A
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Query: 296 NRIL 299
+L
Sbjct: 974 LLLL 977
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 82 FNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCT 141
+ A K Y M GV + + + C G+ A ++R M G + Y
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 142 VVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG 201
V+ +LA LF+EM L DV T+ +V CK G + ++ K N++ + G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 202 VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESE 261
+PN+ TY I + + A ++ EG P++VTY+ +I G C+ +V ++
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 262 ECLHKMV----------------NDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
+ +M ++ +P+ TY ++DG+CK V++A ++L +
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 306 G 306
G
Sbjct: 669 G 669
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 118/333 (35%), Gaps = 73/333 (21%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R + R G A++ R+ + PS +YN ++ ++ + A ++ M +
Sbjct: 207 VRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANL 266
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRL--------------------------------LR 125
D +T S C+ G+ AL L L
Sbjct: 267 RMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326
Query: 126 NMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKG 185
M C N V Y T++ G + + + M+ P FN LVH C G
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 186 FVPESEKLLNKVLKRGVSPNLFTYNI---------------------------------- 211
+ KLL K++K G P YNI
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446
Query: 212 -------FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL 264
F + LC G ++A + + +G PD TY+ V+ LC S++ +
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 265 HKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
+M GL D +TY ++D +CK G+++ A +
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 3/235 (1%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YNA+++++V + +++D + ++ CR G AL L +
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
F + Y ++ F + D A + EM +L D T + LCK G
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E+ L V P+ Y I GLC + A+ FL + P+VVTY+T++
Sbjct: 288 EA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
CG K ++ + L+ M+ +G P +N+++ YC G A ++LK V
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 17/228 (7%)
Query: 69 YNAIMNILVEF----GYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
+ +N+LV G F+ A + R+KD TY I++F + R +A +
Sbjct: 199 FGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIH 258
Query: 125 RNMSVF-----GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
R MS+ G + AY G + RE + + PD + KL+
Sbjct: 259 REMSLANLRMDGFTLRCFAYSLCKVGKW--------REALTLVETENFVPDTVFYTKLIS 310
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
GLC+ E+ LN++ PN+ TY+ + G + L R L + EG P
Sbjct: 311 GLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYP 370
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
+N+++ C + + L KMV G P YN +I C
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
P +T+N L+ K + + + ++ + + FT F LC+ G A+
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
V E PD V Y +I GLC S E+ + L++M P+ TY+T++ G
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 289 KGMVQDANRILKDAVFKG 306
K + R+L + +G
Sbjct: 350 KKQLGRCKRVLNMMMMEG 367
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 4/306 (1%)
Query: 5 LGHHREFNQMENLLSEMRATLENNLLE-GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCE 63
LG +++ LL ++ L+ LL+ AY + +Y R GK ++A+D+FERM
Sbjct: 185 LGRESQYSVAAKLLDKI--PLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPS 242
Query: 64 PSVHSYNAIMNILVEFG-YFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
P++ +YN I+++ + G + + V M+ KG+ D +T + + + R G A
Sbjct: 243 PTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKE 302
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
+ G V Y ++ F + G A + EM E S D T+N+LV
Sbjct: 303 FFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV 362
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
+ GF E+ ++ + K+GV PN TY I + G D A+ S+ G P+
Sbjct: 363 RAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC 422
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
TYN V+ L +KSR E + L M ++G P+ T+NT++ KGM + NR+ ++
Sbjct: 423 TYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Query: 303 VFKGFK 308
GF+
Sbjct: 483 KSCGFE 488
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 35/293 (11%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ +YGR G +A ++ M V +YNA++N L G + V MK KG
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 98 GSDVYTYTI---------------RIKSFCRTGRPHAALRLLRNMSV--FGCSFNA---- 136
+Y++ RI++ + G+ + LLR + + F C A
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 137 --------------VAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
V + ++++ F D A + + + E L PD+ T+N L+
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
++G ++E++L + K + P+L +YN I+G CR G + AV L ++ G+ P +
Sbjct: 678 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
TYNT + G E E+ + M + +P+E T+ ++DGYC+ G +A
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%)
Query: 53 VFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFC 112
VF M EP ++N +++ G A K+Y M G + V TY + +
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 113 RTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVA 172
R G + ++ +M G +Y ++ + + G+ + + + E + P
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597
Query: 173 TFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV 232
L+ K + SE+ K G P++ +N + R D+A L S+
Sbjct: 598 LLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESI 657
Query: 233 SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
+G+SPD+VTYN+++ R+ ++EE L + L+PD +YNT+I G+C++G++
Sbjct: 658 REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLM 717
Query: 293 QDANRILKDAVFKGFK 308
Q+A R+L + +G +
Sbjct: 718 QEAVRMLSEMTERGIR 733
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 35/303 (11%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + +YG+ GK EA+ +F M C P+ +YNA++++L + N+ K+ M
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K G + T+ + G R+ R M G + + T+++ + G
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A +++ EM V T+N L++ L +KG E +++ + +G P +Y++
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 213 IQ---------GLCR------EGALDRAVVFLGSV--------------------SREGM 237
+Q G+ R EG + + + L ++ + G
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 627
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
PD+V +N+++ R + ++E L + DGL PD TYN+++D Y ++G A
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 298 ILK 300
ILK
Sbjct: 688 ILK 690
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 120/267 (44%), Gaps = 1/267 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+L L ++ EN++S+M++ E +Y ++ Y + G + R+
Sbjct: 532 LLNALARKGDWRSGENVISDMKSK-GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEG 590
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
PS ++ + + + + K G D+ + + F R A
Sbjct: 591 QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQA 650
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+L ++ G S + V Y +++ + G+ A E+ + + L PD+ ++N ++ G
Sbjct: 651 EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKG 710
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
C++G + E+ ++L+++ +RG+ P +FTYN F+ G G + +++ P+
Sbjct: 711 FCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPN 770
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKM 267
+T+ V+ G CR + E+ + + K+
Sbjct: 771 ELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 5/250 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGA--YVEAMRSYGRFGKVQEAVDVFERMD 58
+LQ G + + ++L EM EN+ + Y E + +Y R G +EA V E M
Sbjct: 322 LLQVFGKAGVYTEALSVLKEME---ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
P+ +Y +++ + G ++A K++ MK+ G + TY + + R +
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
+++L +M GCS N + T++A G +F EM PD TFN L+
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI 498
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
+ G ++ K+ ++ + G + + TYN + L R+G + + +G
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 239 PDVVTYNTVI 248
P +Y+ ++
Sbjct: 559 PTETSYSLML 568
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 1/202 (0%)
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I ++ R + A +LL + + + AY T++ + G + A +LF+ M E
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 166 SLCPDVATFNKLVHGLCKKGFVPES-EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
P + T+N ++ K G +L+++ +G+ + FT + + REG L
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A F + G P VTYN ++ + E+ L +M + D TYN ++
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 285 GYCKKGMVQDANRILKDAVFKG 306
Y + G ++A +++ KG
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKG 381
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 146/284 (51%), Gaps = 3/284 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
M+ LG ++F ++ LL EM R + N + Y + SYGR ++EA++VF +M
Sbjct: 365 MVGNLGRAKQFGEINKLLDEMVRDGCKPNTV--TYNRLIHSYGRANYLKEAMNVFNQMQE 422
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
CEP +Y +++I + G+ + A +Y RM++ G+ D +TY++ I + G A
Sbjct: 423 AGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPA 482
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A RL M GC+ N V + ++A + + + A +L+ +M PD T++ ++
Sbjct: 483 AHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVME 542
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
L GF+ E+E + ++ ++ P+ Y + + + G +D+A + ++ + G+ P
Sbjct: 543 VLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRP 602
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
+V T N+++ R R+ E+ L M+ GL P TY ++
Sbjct: 603 NVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 14/290 (4%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLY----------NCEPSV----HSYNAIMNILVE 78
A EA+ ++G +A V ++MD Y +P H+Y ++ L
Sbjct: 312 AAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 371
Query: 79 FGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVA 138
F + +K+ M G + TY I S+ R A+ + M GC + V
Sbjct: 372 AKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVT 431
Query: 139 YCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVL 198
YCT++ + G D+A +++ M E L PD T++ +++ L K G +P + +L +++
Sbjct: 432 YCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMV 491
Query: 199 KRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVV 258
+G +PNL T+NI I + + A+ + G PD VTY+ V+ L +
Sbjct: 492 GQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLE 551
Query: 259 ESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
E+E +M PDE Y ++D + K G V A + + + G +
Sbjct: 552 EAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLR 601
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 155/303 (51%), Gaps = 5/303 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD-L 59
+L L H++F ++ +L +M+ E ++ MR + R + +++F + +
Sbjct: 95 LLDNLVRHKKFLAVDAILHQMKYE-TCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVI 153
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK-DKGVGSDVYTYTIRIKSFCRTGRPH 118
+PS+++ + +N+L++ G N + K+ + K + G+ + + I +K C+ G +
Sbjct: 154 ARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDIN 213
Query: 119 AALRLLRNMSVFGCSF-NAVAYCTVVAGFYEFGDRDLARELFDEMLERS-LCPDVATFNK 176
A ++ M G S+ N++ Y T++ + A ELF++M+ + + PD TFN
Sbjct: 214 FAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNV 273
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
+++G C+ G V ++K+L+ + K G +PN++ Y+ + G C+ G + A V + G
Sbjct: 274 MINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG 333
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
+ D V Y T++ CR E+ + L +M + D TYN I+ G +G ++A
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL 393
Query: 297 RIL 299
++L
Sbjct: 394 QML 396
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 1/246 (0%)
Query: 45 GKVQEAVDVFERM-DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT 103
+ +EAV++FE M P ++N ++N G +A K+ MK G +VY
Sbjct: 246 SRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYN 305
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
Y+ + FC+ G+ A + + G + V Y T++ F G+ D A +L EM
Sbjct: 306 YSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
D T+N ++ GL +G E+ ++L++ GV N +Y I + LC G L+
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELE 425
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
+AV FL +S G+ P T+N ++ LC L + GL P ++ ++
Sbjct: 426 KAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVV 485
Query: 284 DGYCKK 289
+ CK+
Sbjct: 486 ESICKE 491
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 114/232 (49%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ + R G+V+ A + + M C P+V++Y+A+MN + G +A + + +K G+
Sbjct: 275 INGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGL 334
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
D YT + FCR G A++LL M C + + Y ++ G G + A +
Sbjct: 335 KLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQ 394
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ D+ + + ++ +++ LC G + ++ K L+ + +RG+ P+ T+N + LC
Sbjct: 395 MLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLC 454
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
G + V L R G+ P ++ V+ +C++ ++V E L +V+
Sbjct: 455 ESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 1/237 (0%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK-GVGSDVYTYTIRIKSFCRTGRPHAALR 122
P+ +Y+ +M+ L +A +++ M K G+ D T+ + I FCR G A +
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
+L M GC+ N Y ++ GF + G A++ FDE+ + L D + L++ C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
+ G E+ KLL ++ + TYN+ ++GL EG + A+ L EG+ +
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKG 409
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+Y ++ LC + ++ + L M G+ P T+N ++ C+ G + R+L
Sbjct: 410 SYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 8/247 (3%)
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+Y+ +++ LV F + +MK + + ++ F R+ + + +
Sbjct: 91 TYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLI 150
Query: 128 SVFG---CSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER-SLCPDVATFNKLVHGLCK 183
V S NA++ C + + G+ +L+R+L L P+ FN LV CK
Sbjct: 151 QVIARVKPSLNAISTCLNL--LIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCK 208
Query: 184 KGFVPESEKLLNKVLKRGVS-PNLFTYNIFIQGLCREGALDRAV-VFLGSVSREGMSPDV 241
G + + ++ ++ + G+S PN TY+ + L AV +F +S+EG+SPD
Sbjct: 209 NGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDP 268
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
VT+N +I G CR V +++ L M +G P+ + Y+ +++G+CK G +Q+A + +
Sbjct: 269 VTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDE 328
Query: 302 AVFKGFK 308
G K
Sbjct: 329 VKKTGLK 335
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 6/212 (2%)
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ KG + TY++ + + R + A +L M C F + ++ F
Sbjct: 81 QQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLH 140
Query: 153 DLARELFD--EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR-GVSPNLFTY 209
D E+F+ +++ R + P + + ++ L G V S KLL G+ PN +
Sbjct: 141 DKVMEMFNLIQVIAR-VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIF 199
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMS-PDVVTYNTVICGLCRKSRVVESEECLHKMV 268
NI ++ C+ G ++ A + + + R G+S P+ +TY+T++ L SR E+ E M+
Sbjct: 200 NILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMI 259
Query: 269 N-DGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+ +G+ PD T+N +I+G+C+ G V+ A +IL
Sbjct: 260 SKEGISPDPVTFNVMINGFCRAGEVERAKKIL 291
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y M + + GK+QEA F+ + + Y +MN G ++A K+ MK
Sbjct: 306 YSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+D TY + ++ GR AL++L G N +Y ++ G+ +
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELE 425
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A + M ER + P AT+N+LV LC+ G+ ++L L+ G+ P ++ +
Sbjct: 426 KAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVV 485
Query: 214 QGLCREGALDRAVVFLGSV 232
+ +C+E L L S+
Sbjct: 486 ESICKERKLVHVFELLDSL 504
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 132/269 (49%), Gaps = 9/269 (3%)
Query: 45 GKVQEAVDVFERMDLYNC--------EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG 96
G V+ + + + + +N S H YN ++++ + F+ A + MK +
Sbjct: 122 GSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRN 181
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
V + T+TI I+ + R G A+ M +GC + +A+ V++ A+
Sbjct: 182 VEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQ 241
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
FD + +R PDV + LV G C+ G + E+EK+ ++ G+ PN++TY+I I L
Sbjct: 242 SFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDAL 300
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
CR G + RA + G +P+ +T+N ++ + R + + ++M G +PD
Sbjct: 301 CRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDT 360
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFK 305
TYN +I+ +C+ +++A ++L + K
Sbjct: 361 ITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 134/283 (47%), Gaps = 2/283 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M+ G R+F+ +L+ M++ +E + +R Y R G EAV F RM+ Y
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIE-TFTILIRRYVRAGLASEAVHCFNRMEDY 215
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
C P +++ +++ L ++A + +KD+ DV YT ++ +CR G A
Sbjct: 216 GCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEA 274
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
++ + M + G N Y V+ G A ++F +ML+ P+ TFN L+
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRV 334
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
K G + ++ N++ K G P+ TYN I+ CR+ L+ AV L ++ ++ +
Sbjct: 335 HVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVN 394
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
T+NT+ + +K V + KM+ +P+ TYN ++
Sbjct: 395 ASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 141/308 (45%), Gaps = 3/308 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
++ L R ++ ++ ++ E +++ Y +R + R G++ EA VF+ M L
Sbjct: 227 VISNLSRKRRASEAQSFFDSLKDRFEPDVI--VYTNLVRGWCRAGEISEAEKVFKEMKLA 284
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
EP+V++Y+ +++ L G ++AH V+ M D G + T+ ++ + GR
Sbjct: 285 GIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKV 344
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
L++ M GC + + Y ++ + + A ++ + M+++ + +TFN +
Sbjct: 345 LQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRY 404
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
+ KK V + ++ +K+++ PN TYNI ++ + D + + + + P+
Sbjct: 405 IEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPN 464
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDG-LQPDEFTYNTIIDGYCKKGMVQDANRIL 299
V TY ++ C + + +MV + L P Y ++ + G ++ ++
Sbjct: 465 VNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELV 524
Query: 300 KDAVFKGF 307
+ + KG
Sbjct: 525 EKMIQKGL 532
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 193 LLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLC 252
L++ + R V ++ T+ I I+ R G AV + G PD + ++ VI L
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLS 232
Query: 253 RKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
RK R E++ + D +PD Y ++ G+C+ G + +A ++ K+ G +
Sbjct: 233 RKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIE 287
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 139/300 (46%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+++ LG ++F + + L E R + + R+Y R EA F RM +
Sbjct: 108 LVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEF 167
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+P V + +++ L + + N A + + + K G+ TY+I ++ + R A
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
++ M C + +AY ++ + GD D ++F EM L PD +F +H
Sbjct: 228 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 287
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
C G V + K+L+++ + + PN++T+N I+ LC+ +D A + L + ++G +PD
Sbjct: 288 YCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD 347
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
TYN+++ C V + + L +M PD TYN ++ + G A I +
Sbjct: 348 TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWE 407
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 7/254 (2%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y +R + R A VF+ M NC + +YNA+++ L + G + +K++ M
Sbjct: 210 TYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEM 269
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G+ D Y++ I I ++C G H+A ++L M + N + ++ +
Sbjct: 270 GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKV 329
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A L DEM+++ PD T+N ++ C V + KLL+++ + P+ TYN+
Sbjct: 330 DDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMV 389
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEEC--LHKMVND 270
++ L R G DRA +S P V TY +I GL RK +E E C M+++
Sbjct: 390 LKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLE-EACRYFEMMIDE 448
Query: 271 GLQPDEFTYNTIID 284
G+ P Y+T ++
Sbjct: 449 GIPP----YSTTVE 458
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 131/264 (49%), Gaps = 5/264 (1%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK EA ++ +M+ P+V SYN +M + A V+ + +KG+ + YTY
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+I I R AL ++ +M+ N V Y T++ G + G AREL M+E
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 165 -RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
+ LC ++N ++ G K+G + + ++ G+SPN+ TY + GLC+ +D
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
+A+ + +G+ D+ Y +I G C++S + + +++ +GL P + YN++I
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Query: 284 DGYCKKGMVQDA----NRILKDAV 303
G+ G + A ++LKD +
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDGL 720
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
S SYN+I++ + G + A Y M G+ +V TYT + C+ R AL +
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
M G + AY ++ GF + + + A LF E+LE L P +N L+ G
Sbjct: 643 DEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNL 702
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
G + + L K+LK G+ +L TY I GL ++G L A + G+ PD + Y
Sbjct: 703 GNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIY 762
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVF 304
++ GL +K + V+ + +M + + P+ YN +I G+ ++G + +A R+ + +
Sbjct: 763 TVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLD 822
Query: 305 KGF 307
KG
Sbjct: 823 KGI 825
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 129/253 (50%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y + + + G++ AV +E M P+V +Y ++MN L + +QA ++ M
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K+KGV D+ Y I FC+ +A L + G + + Y ++++GF G+
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A +L+ +ML+ L D+ T+ L+ GL K G + + +L ++ G+ P+ Y +
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ GL ++G + V + + ++P+V+ YN VI G R+ + E+ +M++ G+
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Query: 273 QPDEFTYNTIIDG 285
PD T++ ++ G
Sbjct: 826 LPDGATFDILVSG 838
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 113/216 (52%), Gaps = 1/216 (0%)
Query: 88 VYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFY 147
++ +M+ +G + T+++ I+ F + G AL + M V G + + T++ G+
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 148 EFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
+ + A +LFDE E L +V N ++ LCK+G E+ +LL+K+ RG+ PN+
Sbjct: 421 KGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
+YN + G CR+ +D A + ++ +G+ P+ TY+ +I G R + E ++ M
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
+ ++ + Y TII+G CK G A +L + +
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 129/265 (48%), Gaps = 2/265 (0%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G++++A++ +++M++ PSV + I+ ++ +A K++ + G+ ++V+
Sbjct: 388 GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVC 446
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ C+ G+ A LL M G N V+Y V+ G + DLAR +F +LE
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ L P+ T++ L+ G + + +++N + + N Y I GLC+ G +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 225 AVVFLGSVSREG-MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
A L ++ E + ++YN++I G ++ + + +M +G+ P+ TY +++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 284 DGYCKKGMVQDANRILKDAVFKGFK 308
+G CK + A + + KG K
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVK 651
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 128/272 (47%), Gaps = 2/272 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
MR+ R K EA++V R EP Y+ + + A+ + MK+K +
Sbjct: 240 MRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKL 299
Query: 98 -GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
TYT I + + G A+RL M G S N VA +++ G + D A
Sbjct: 300 CVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
LFD+M + P+ TF+ L+ K G + ++ + K+ G++P++F + IQG
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW 419
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
+ + A+ G++ +V NT++ LC++ + E+ E L KM + G+ P+
Sbjct: 420 LKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+YN ++ G+C++ + A + + + KG K
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 138/292 (47%), Gaps = 9/292 (3%)
Query: 22 RATLENNLLEGAYVEA------MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNI 75
R +E+ L G ++ A +R Y G + ++ M Y P + ++ ++
Sbjct: 256 REFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDK 315
Query: 76 LVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFN 135
L + G+ +A V ++K G+ D + + I FC+ G+P A++L+ + F N
Sbjct: 316 LCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS---FRLRPN 372
Query: 136 AVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLN 195
Y + ++ GD A +F E+ E L PD + ++ G C G ++ +
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 196 KVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKS 255
+LK G P+L T I I R G++ A ++ EG+ DVVTYN ++ G +
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 256 RVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
++ + E + +M + G+ PD TYN +I +G + +AN I+ + + +GF
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 130/262 (49%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + A +F+ + P Y +++ G ++A + + + G + T
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS 446
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
TI I + R G A + RNM G + V Y ++ G+ + + EL DEM
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ PDVAT+N L+H + +G++ E+ ++++++++RG P+ + I G + G
Sbjct: 507 AGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + ++ M PDVVT + ++ G C+ R+ ++ +K+++ GL+PD YNT+I
Sbjct: 567 AFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIH 626
Query: 285 GYCKKGMVQDANRILKDAVFKG 306
GYC G ++ A ++ V +G
Sbjct: 627 GYCSVGDIEKACELIGLMVQRG 648
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y + Y G+ +A F + PS+ + ++ FG + A V+ MK
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+G+ DV TY + + +T + + L+ M G S + Y ++ G D
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A E+ E++ R P F ++ G K+G E+ L + + P++ T + +
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
G C+ +++A+V + G+ PDVV YNT+I G C + ++ E + MV G+
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 274 PDEFTYNTIIDG 285
P+E T++ ++ G
Sbjct: 651 PNESTHHALVLG 662
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 80 GYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAY 139
GYF++ ++ M MK G+ D+ +T+ I C+ G A +L + +FG S
Sbjct: 285 GYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGIS------ 338
Query: 140 CTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
D + + ++ G CK G E+ KL++
Sbjct: 339 -----------------------------QDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL 369
Query: 200 RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVE 259
R PN+F Y+ F+ +C G + RA + G+ PD V Y T+I G C R +
Sbjct: 370 R---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 260 SEECLHKMVNDGLQPDEFTYNTIIDGYCKK-GMVQDANRILKDAVFKGFK 308
+ + ++ G P T +TI+ G C + G + DA + ++ +G K
Sbjct: 427 AFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 5/200 (2%)
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYC-TVVAGFYEFGDRDLARELFDE 161
++I I R + + AL+L + FG F + C +++ +LARE +
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGI-FPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
ML R + A + + C G+ + +LL + G+ P++ + +FI LC+ G
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
L A L + G+S D V+ ++VI G C+ + E+ + +H L+P+ F Y++
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSS 378
Query: 282 IIDGYCKKGMVQDANRILKD 301
+ C G + A+ I ++
Sbjct: 379 FLSNICSTGDMLRASTIFQE 398
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 138/292 (47%), Gaps = 9/292 (3%)
Query: 22 RATLENNLLEGAYVEA------MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNI 75
R +E+ L G ++ A +R Y G + ++ M Y P + ++ ++
Sbjct: 256 REFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDK 315
Query: 76 LVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFN 135
L + G+ +A V ++K G+ D + + I FC+ G+P A++L+ + F N
Sbjct: 316 LCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS---FRLRPN 372
Query: 136 AVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLN 195
Y + ++ GD A +F E+ E L PD + ++ G C G ++ +
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 196 KVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKS 255
+LK G P+L T I I R G++ A ++ EG+ DVVTYN ++ G +
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 256 RVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
++ + E + +M + G+ PD TYN +I +G + +AN I+ + + +GF
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 130/262 (49%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + A +F+ + P Y +++ G ++A + + + G + T
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS 446
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
TI I + R G A + RNM G + V Y ++ G+ + + EL DEM
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ PDVAT+N L+H + +G++ E+ ++++++++RG P+ + I G + G
Sbjct: 507 AGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + ++ M PDVVT + ++ G C+ R+ ++ +K+++ GL+PD YNT+I
Sbjct: 567 AFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIH 626
Query: 285 GYCKKGMVQDANRILKDAVFKG 306
GYC G ++ A ++ V +G
Sbjct: 627 GYCSVGDIEKACELIGLMVQRG 648
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y + Y G+ +A F + PS+ + ++ FG + A V+ MK
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+G+ DV TY + + +T + + L+ M G S + Y ++ G D
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A E+ E++ R P F ++ G K+G E+ L + + P++ T + +
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
G C+ +++A+V + G+ PDVV YNT+I G C + ++ E + MV G+
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 274 PDEFTYNTIIDG 285
P+E T++ ++ G
Sbjct: 651 PNESTHHALVLG 662
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 40/230 (17%)
Query: 80 GYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAY 139
GYF++ ++ M MK G+ D+ +T+ I C+ G A +L + +FG S
Sbjct: 285 GYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGIS------ 338
Query: 140 CTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
D + + ++ G CK G E+ KL++
Sbjct: 339 -----------------------------QDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL 369
Query: 200 RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVE 259
R PN+F Y+ F+ +C G + RA + G+ PD V Y T+I G C R +
Sbjct: 370 R---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 260 SEECLHKMVNDGLQPDEFTYNTIIDGYCKK-GMVQDANRILKDAVFKGFK 308
+ + ++ G P T +TI+ G C + G + DA + ++ +G K
Sbjct: 427 AFQYFGALLKSG-NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 5/200 (2%)
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYC-TVVAGFYEFGDRDLARELFDE 161
++I I R + + AL+L + FG F + C +++ +LARE +
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGI-FPSRGVCISLLKEILRVHGLELAREFVEH 261
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
ML R + A + + C G+ + +LL + G+ P++ + +FI LC+ G
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
L A L + G+S D V+ ++VI G C+ + E+ + +H L+P+ F Y++
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSS 378
Query: 282 IIDGYCKKGMVQDANRILKD 301
+ C G + A+ I ++
Sbjct: 379 FLSNICSTGDMLRASTIFQE 398
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 139/281 (49%), Gaps = 2/281 (0%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
N ++ + + G+ K +E + + Y+ S SYN+I++ V+ G + A
Sbjct: 553 NEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM--SCTSYNSIIDGFVKVGDTDSAV 610
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
+ Y M + G +V T+T I FC++ R AL + M + AY ++ GF
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
+ D A LF E+ E L P+V+ +N L+ G G + + L K++ G+S +L
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDL 730
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
FTY I GL ++G ++ A + G+ PD + + ++ GL +K + +++ + L +
Sbjct: 731 FTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEE 790
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
M + P+ Y+T+I G+ ++G + +A R+ + + KG
Sbjct: 791 MKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 36/290 (12%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GKV A + M+ EP+V YN +M + A ++ M +KG+ + +TY
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522
Query: 105 TIRIKSF-----------------------------------CRTGRPHAALRLLRNM-S 128
+I I F C+ G+ A +L+N+
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
S + +Y +++ GF + GD D A E + EM E P+V TF L++G CK +
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
+ ++ +++ + +L Y I G C++ + A + G+ P+V YN++I
Sbjct: 643 LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
G ++ + + KMVNDG+ D FTY T+IDG K G + A+ +
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 136/288 (47%), Gaps = 1/288 (0%)
Query: 16 NLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNI 75
+LL EMR L + Y + ++ + G ++EAV V + M + SV + +++N
Sbjct: 295 DLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNG 354
Query: 76 LVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFN 135
+ +A ++ RM+++G+ D +++ ++ FC+ A+ M + +
Sbjct: 355 YCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPS 414
Query: 136 AVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLN 195
+V T++ G + + A E+F++ E + NK+ CK+G V + L
Sbjct: 415 SVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLK 473
Query: 196 KVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKS 255
+ ++G+ PN+ YN + CR +D A + +G+ P+ TY+ +I G +
Sbjct: 474 MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Query: 256 RVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
+ + +++M + +E YNTII+G CK G A +L++ +
Sbjct: 534 DEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 1/227 (0%)
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
N I + + G + A M+ KG+ +V Y + + CR A + M
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
G N Y ++ GF++ D A ++ ++M + + +N +++GLCK G +
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 190 SEKLLNKVLK-RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
++++L ++K + S + +YN I G + G D AV +S G SP+VVT+ ++I
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
G C+ +R+ + E H+M + L+ D Y +IDG+CKK ++ A
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 43/319 (13%)
Query: 29 LLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV 88
L A+ + +Y R ++ AVD F M P V N +++ LV ++A ++
Sbjct: 167 LTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEI 226
Query: 89 YMRMKDKGVGSDVYT-----------------------------------YTIRIKSFCR 113
Y +M GV D T +++ +++ C+
Sbjct: 227 YNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACK 286
Query: 114 TGRPHAALRLLRNM-SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVA 172
T AL LLR M G + Y +V+ F + G+ + A + DEM+ + V
Sbjct: 287 TPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVI 346
Query: 173 TFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV 232
LV+G CK + ++ L N++ + G++P+ +++ ++ C+ +++A+ F +
Sbjct: 347 AATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM 406
Query: 233 SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ---PDEFTYNTIIDGYCKK 289
++P V +T+I G C K+ ES E ++ ND + F N I +CK+
Sbjct: 407 KSVRIAPSSVLVHTMIQG-CLKA---ESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQ 462
Query: 290 GMVQDANRILKDAVFKGFK 308
G V A LK KG +
Sbjct: 463 GKVDAATSFLKMMEQKGIE 481
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 2/272 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK-G 96
MR+ R K +EAV +F R+ EP ++ + + A + M+ K G
Sbjct: 246 MRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLG 305
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
V + TYT I +F + G A+R++ M FG + +A ++V G+ + + A
Sbjct: 306 VPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKAL 365
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
+LF+ M E L PD F+ +V CK + ++ + ++ ++P+ + IQG
Sbjct: 366 DLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG- 424
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
C + A + + + S E N + C++ +V + L M G++P+
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
YN ++ +C+ + A I + + KG +
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLE 516
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
FG A+ ++ + D A + F M++R + P V N ++ L + + E
Sbjct: 163 FGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDE 222
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
++++ NK++ GV+ + T + ++ RE + AV V G PD + ++ +
Sbjct: 223 AKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQ 282
Query: 250 GLCRKSRVVESEECLHKMVND-GLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
C+ +V + + L +M G+ + TY ++I + K+G +++A R++ + V
Sbjct: 283 AACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV 337
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 3/284 (1%)
Query: 10 EFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
EF Q+ EM R ++ + + + A+ S G G + A ++F+ M E V S
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG--GLWEAARNLFDEMTNRRIEQDVFS 376
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN +++ + + G + A ++ +M K + +V +Y+ I F + GR AL L M
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G + + V+Y T+++ + + G + A ++ EM + DV T+N L+ G K+G
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E +K+ ++ + V PNL TY+ I G + G A+ G+ DVV Y+ +I
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
LC+ V + + +M +G+ P+ TYN+IID + + +
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 139/277 (50%), Gaps = 1/277 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGY-FNQAHKVYMR 91
A+ + +YGR G +EA+ VF M Y P++ +YNA+++ + G F Q K +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
M+ GV D T+ + R G AA L M+ + +Y T++ + G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
DLA E+ +M + + P+V +++ ++ G K G E+ L ++ G++ + +YN
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
+ + G + A+ L ++ G+ DVVTYN ++ G ++ + E ++ +M +
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ P+ TY+T+IDGY K G+ ++A I ++ G +
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 116/218 (53%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G++ A ++ +M + P+V SY+ +++ + G F++A ++ M+ G+ D +Y
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ + + GR AL +LR M+ G + V Y ++ G+ + G D +++F EM
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ P++ T++ L+ G K G E+ ++ + G+ ++ Y+ I LC+ G +
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE 262
AV + +++EG+SP+VVTYN++I R + + S +
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 138/273 (50%), Gaps = 2/273 (0%)
Query: 31 EGAYVEAMRS-YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVY 89
+G AM S GR+GKV A +FE +V++++A+++ G +A V+
Sbjct: 232 QGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVF 291
Query: 90 MRMKDKGVGSDVYTYTIRIKSFCRTGRPHAAL-RLLRNMSVFGCSFNAVAYCTVVAGFYE 148
MK+ G+ ++ TY I + + G + + M G + + + +++A
Sbjct: 292 NSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 149 FGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFT 208
G + AR LFDEM R + DV ++N L+ +CK G + + ++L ++ + + PN+ +
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV 268
Y+ I G + G D A+ G + G++ D V+YNT++ + R E+ + L +M
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 269 NDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+ G++ D TYN ++ GY K+G + ++ +
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 126/244 (51%), Gaps = 9/244 (3%)
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
+A+++ L +G A +++ G G+ VY ++ I ++ R+G A+ + +M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 130 FGCSFNAVAYCTVV----AGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKG 185
+G N V Y V+ G EF + +A+ FDEM + PD TFN L+ +C +G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEF--KQVAK-FFDEMQRNGVQPDRITFNSLL-AVCSRG 352
Query: 186 FVPESEK-LLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
+ E+ + L +++ R + ++F+YN + +C+ G +D A L + + + P+VV+Y
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVF 304
+TVI G + R E+ +M G+ D +YNT++ Y K G ++A IL++
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 305 KGFK 308
G K
Sbjct: 473 VGIK 476
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 130/293 (44%), Gaps = 19/293 (6%)
Query: 11 FNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYN 70
F++ NL EMR L L +Y + Y + G+ +EA+D+ M + V +YN
Sbjct: 425 FDEALNLFGEMR-YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYN 483
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
A++ + G +++ KV+ MK + V ++ TY+ I + + G A+ + R
Sbjct: 484 ALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
G + V Y ++ + G A L DEM + + P+V T+N ++ + + S
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC- 249
N G P F+ + EG +R + G ++ E + T C
Sbjct: 604 ADYSNG----GSLP--FSSSALSALTETEG--NRVIQLFGQLTTESNN-----RTTKDCE 650
Query: 250 -GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
G+ S ++E +H++ ++P+ T++ I++ + +DA+ +L++
Sbjct: 651 EGMQELSCILEVFRKMHQLE---IKPNVVTFSAILNACSRCNSFEDASMLLEE 700
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 140 CTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
C GFYEF + ER + ++ L + G V ++++
Sbjct: 212 CDKAVGFYEFAVKR----------ERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFA 261
Query: 200 RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKS--RV 257
G ++ ++ I R G + A+ S+ G+ P++VTYN VI C K
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEF 320
Query: 258 VESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+ + +M +G+QPD T+N+++ C +G + +A R L D
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFD 363
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 4/245 (1%)
Query: 54 FERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCR 113
FE+M PSV + N ++ +L + N+A VY M + G+ V T+ + S +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 114 TGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVAT 173
G ++ M F+ V Y ++ GF + G + AR +M +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 174 FNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVS 233
FN L+ G CK+G ++ + +++L G+ P TYNI+I LC G +D A L S++
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 234 REGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQ 293
+PDVV+YNT++ G + + VE+ + + P TYNT+IDG C+ G ++
Sbjct: 371 ----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 294 DANRI 298
A R+
Sbjct: 427 GAQRL 431
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 1/268 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y M Y + GK EA +F+ + + PS+ +YN +++ L E G A ++ M
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ + DV TYT +K F + G A + M G + AY T G GD
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 495
Query: 153 DLARELFDEMLERS-LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
D A L +EM+ PD+ +N + GLCK G + ++ + K+ + G+ P+ TY
Sbjct: 496 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTT 555
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
I+G G A + R+ + P V+TY +I G + R+ ++ + +M G
Sbjct: 556 VIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRG 615
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRIL 299
++P+ T+N ++ G CK G + +A R L
Sbjct: 616 VRPNVMTHNALLYGMCKAGNIDEAYRYL 643
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 125/251 (49%), Gaps = 1/251 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ + + G + A +V++ M +P ++Y + G ++A +++ M
Sbjct: 446 TYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM 505
Query: 93 -KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
D+ Y +RI C+ G A+ R + G + V Y TV+ G+ E G
Sbjct: 506 VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ 565
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
+AR L+DEML + L P V T+ L++G K G + ++ + ++ KRGV PN+ T+N
Sbjct: 566 FKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 625
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
+ G+C+ G +D A +L + EG+ P+ +Y +I C + E + +M++
Sbjct: 626 LLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE 685
Query: 272 LQPDEFTYNTI 282
++PD +T+ +
Sbjct: 686 IEPDGYTHRAL 696
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 124/253 (49%), Gaps = 5/253 (1%)
Query: 44 FGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT 103
FG++ +A ++ M P V SYN +M+ ++ G F +A ++ ++ + + T
Sbjct: 356 FGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
Y I C +G A RL M+ + + Y T+V GF + G+ +A E++DEML
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG-VSPNLFTYNIFIQGLCREGAL 222
+ + PD + G + G ++ +L +++ +P+L YN+ I GLC+ G L
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
+A+ F + R G+ PD VTY TVI G + + +M+ L P TY +
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591
Query: 283 IDGYCKKGMVQDA 295
I G+ K G ++ A
Sbjct: 592 IYGHAKAGRLEQA 604
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 127/262 (48%), Gaps = 4/262 (1%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
+ +A V+E M + P+V ++N +++ + G + K+++ MK + + TY I
Sbjct: 219 MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNI 278
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I F + G+ A R +M G + ++ ++ G+ + G D A + DEML
Sbjct: 279 LINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG 338
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
+ P +T+N + LC G + ++ +LL+ + +P++ +YN + G + G A
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEAS 394
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
+ + + P +VTYNT+I GLC + ++ +M + PD TY T++ G+
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 287 CKKGMVQDANRILKDAVFKGFK 308
K G + A + + + KG K
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIK 476
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 4/259 (1%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G ++ ++ M N E S +YN ++N + G +A + + M+ G Y++
Sbjct: 252 GDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSF 311
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I+ +C+ G A + M G Y + +FG D AREL M
Sbjct: 312 NPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-- 369
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
PDV ++N L+HG K G E+ L + + + P++ TYN I GLC G L+
Sbjct: 370 --AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEG 427
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A ++ + + PDV+TY T++ G + + + E +M+ G++PD + Y T
Sbjct: 428 AQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAV 487
Query: 285 GYCKKGMVQDANRILKDAV 303
G + G A R+ ++ V
Sbjct: 488 GELRLGDSDKAFRLHEEMV 506
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 13/280 (4%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
N L+EG Y + G +A V + M P+ +YN + L +FG + A
Sbjct: 312 NPLIEG--------YCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
++ M DV +Y + + + G+ A L ++ + V Y T++ G
Sbjct: 364 ELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
E G+ + A+ L +EM + + PDV T+ LV G K G + + ++ +++L++G+ P+
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 207 FTYNIFIQGLCREGALDRAV-VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLH 265
+ Y G R G D+A + V+ + +PD+ YN I GLC+ +V++ E
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
K+ GL PD TY T+I GY + G + A + + + K
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 91/224 (40%), Gaps = 37/224 (16%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ G + +A++ ++ P +Y ++ +E G F A +Y M K + V
Sbjct: 527 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
TY + I + GR A + Y T EM
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQ----------------YST-------------------EM 611
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+R + P+V T N L++G+CK G + E+ + L K+ + G+ PN ++Y + I C
Sbjct: 612 KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKW 671
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCR--KSRVVESEECL 264
+ V + + + PD T+ + L + +SR VE E L
Sbjct: 672 EEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERL 715
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y +R Y G+ + A ++++ M PSV +Y ++ + G QA + M
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 611
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K +GV +V T+ + C+ G A R L M G N +Y +++ +F
Sbjct: 612 KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKW 671
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCK 183
+ +L+ EML++ + PD T L L K
Sbjct: 672 EEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 190 SEKLL---NKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
+EK L K++++G P++ NI ++ L +++A ++ G+ P V+T+NT
Sbjct: 184 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
++ + + ++ +M ++ E TYN +I+G+ K G +++A R D G
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303
Query: 307 F 307
F
Sbjct: 304 F 304
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 139/309 (44%), Gaps = 29/309 (9%)
Query: 5 LGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNC 62
L +F + + L ++ R +N + + M+ G G V+EA+ F RM Y+C
Sbjct: 137 LAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHC 196
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV--GSDVYTYTIRIKSFCRTGRPHAA 120
+P V++YN I+N L G F +A + +M+ G D YTYTI I S+CR G
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+ +R +E A +F EML R PDV T+N L+ G
Sbjct: 257 RKAIRRR------------------MWE------ANRMFREMLFRGFVPDVVTYNCLIDG 292
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS-P 239
CK + + +L + +G PN TYN FI+ ++ A+ + ++ + G P
Sbjct: 293 CCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVP 352
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
TY +I L R E+ + + +MV GL P E+TY + D +G+ + L
Sbjct: 353 GSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEEL 412
Query: 300 KDAVFKGFK 308
+ +G +
Sbjct: 413 HKRMREGIQ 421
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 147/343 (42%), Gaps = 35/343 (10%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
++ KLG + F++++ +L ++ E + + +GR A+ +F+ M Y
Sbjct: 53 IITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQY 112
Query: 61 NCE----------------------------------PSVHSYNAIMNILVEFGYFNQAH 86
C+ P +YN +++ + G F+ A
Sbjct: 113 RCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDAL 172
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM-SVFGCSFNAVAYCTVVAG 145
K++ M K V T+ I C+ R AL++ +M V+G Y +++
Sbjct: 173 KLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKA 232
Query: 146 FYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
+ G+ A +L DE E + D A ++ L+ L K G E +L ++ ++G P+
Sbjct: 233 LCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPD 292
Query: 206 LFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLH 265
TYN+ I G C E + A L + +G+ PDV++YN ++ R + E+
Sbjct: 293 TVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFE 352
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
M G PD +Y + DG C+ ++A IL + +FKG+K
Sbjct: 353 DMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYK 395
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 121/256 (47%), Gaps = 1/256 (0%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM-KDKGVGSDVYT 103
G +A+ +F+ M +P+ ++ +++ L + +A K+ M K GV V+
Sbjct: 166 GCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHI 225
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
Y IK+ C+ G A +L +A Y T+++ + G + + +EM
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMS 285
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
E+ PD T+N L++G C + + ++L++++++G+ P++ +YN+ + R +
Sbjct: 286 EKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWE 345
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
A + R G SPD ++Y V GLC + E+ L +M+ G +P +
Sbjct: 346 EATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFL 405
Query: 284 DGYCKKGMVQDANRIL 299
C+ G ++ ++++
Sbjct: 406 QKLCESGKLEILSKVI 421
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 37/262 (14%)
Query: 45 GKVQEAVDV-FERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT 103
+V+EA+ + + + +Y P+VH Y +++ L + G + A K+ + + D
Sbjct: 201 SRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAI 260
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
Y+ I S + GR + +L MS GC + V Y ++ GF D + A + DEM+
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV 320
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI------------ 211
E+ L PDV ++N ++ + E+ L + +RG SP+ +Y I
Sbjct: 321 EKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFE 380
Query: 212 -----------------------FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
F+Q LC G L+ + S+ R G++ D ++ +I
Sbjct: 381 EAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR-GIAGDADVWSVMI 439
Query: 249 CGLCRKSRVVESEECLHKMVND 270
+C++ + +S + L V +
Sbjct: 440 PTMCKEPVISDSIDLLLNTVKE 461
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 2/286 (0%)
Query: 12 NQMENLLSEMRATLENNLLEGA--YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSY 69
N+++ ++ + ++N L+ G Y + + G+ +E++ + M EPS +
Sbjct: 453 NKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTL 512
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
N I L E F A + +M+ G + T +K C GR A + L +++
Sbjct: 513 NCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAG 572
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
G + VA + G + D ELF ++ CPDV ++ L+ LCK E
Sbjct: 573 EGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
++ L N+++ +G+ P + TYN I G C+EG +DR + + + + +PDV+TY ++I
Sbjct: 633 ADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIH 692
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
GLC R E+ ++M P+ T+ +I G CK G +A
Sbjct: 693 GLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEA 738
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 11 FNQMENLLSEMR--ATLENNLLE----------GAYVEAMRSYGRFGKVQEAVDVFERM- 57
+N M ++LS R A+L+ +++ GA+ +R G G V EA VF+R+
Sbjct: 109 YNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVR 168
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMR---MKDKGVGSDVYTYTIRIKSFCRT 114
++ C P+ ++YN ++ + + + V R M+D G D +T T ++ +C T
Sbjct: 169 EMGLCVPNAYTYNCLLEAISKSNS-SSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNT 227
Query: 115 GRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATF 174
G+ AL + + G ++ VV+ F ++G D A EL + + ER + + T+
Sbjct: 228 GKSERALSVFNEILSRGWLDEHISTILVVS-FCKWGQVDKAFELIEMLEERDIRLNYKTY 286
Query: 175 NKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
L+HG K+ + ++ +L K+ + G++ ++ Y++ I GLC+ L+ A+ + R
Sbjct: 287 CVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKR 346
Query: 235 EGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
G+ PD ++C +S + E + ++ + Y ++ +G+ + +V +
Sbjct: 347 SGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDK--KSVMLLYKSLFEGFIRNDLVHE 404
Query: 295 ANRILKD 301
A +++
Sbjct: 405 AYSFIQN 411
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
A+D+ ++M Y EP + ++ L E G A K + +G + T I
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
+ L L R++ G + +AY ++ + A LF+EM+ + L P
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
VAT+N ++ G CK+G + + ++ + +P++ TY I GLC G A+
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTY 279
+ + P+ +T+ +I GLC+ E+ +M ++PD Y
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 74/191 (38%), Gaps = 35/191 (18%)
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN-- 210
D+A L ++++ L P +N ++ G+CK+G ES KLL ++ GV P+ FT N
Sbjct: 456 DMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCI 515
Query: 211 ---------------------------------IFIQGLCREGALDRAVVFLGSVSREGM 237
++ LC G A +L V+ EG
Sbjct: 516 YGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGF 575
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
+V I GL + V E + +G PD Y+ +I CK +A+
Sbjct: 576 LGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADI 635
Query: 298 ILKDAVFKGFK 308
+ + V KG K
Sbjct: 636 LFNEMVSKGLK 646
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY +++ + + EA +F M +P+V +YN++++ + G ++ +RM
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ DV TYT I C +GRP A+ M C N + + ++ G + G
Sbjct: 676 YEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWS 735
Query: 153 DLARELFDEMLERSLCPDVATF 174
A F EM E+ + PD A +
Sbjct: 736 GEALVYFREMEEKEMEPDSAVY 757
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 35/299 (11%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+ EA +FE + +P +YNA++ V+ G A + M+ +GV D +TY
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG-------------- 150
++ I ++ GR +A +L+ M N+ + ++AGF + G
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 151 -----DR----------------DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
DR D A FD ML + PD T+N L+ CK G
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 497
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
+E++ + +RG P TYNI I + D LG + +G+ P+VVT+ T++
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ R ++ ECL +M + GL+P YN +I+ Y ++G+ + A + G K
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+ Q+ V + M +P YN +++ +F + A + RM +G+ D T+
Sbjct: 423 GEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTW 482
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I C+ GR A + M GC A Y ++ + + D + L +M
Sbjct: 483 NTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKS 542
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ + P+V T LV K G ++ + L ++ G+ P+ YN I + G ++
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQ 602
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
AV ++ +G+ P ++ N++I R E+ L M +G++PD TY T++
Sbjct: 603 AVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMK 662
Query: 285 GYCKKGMVQDANRILKDAVFKGFK 308
+ Q + ++ + G K
Sbjct: 663 ALIRVDKFQKVPVVYEEMIMSGCK 686
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 7/277 (2%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y + + GR K+ EA + ++ L + +YNA++ +A + +M+
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQTL-----TPLTYNALIGACARNNDIEKALNLIAKMR 224
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAA--LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
G SD Y++ I+S R+ + + LRL + + + ++ GF + GD
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
A +L L AT ++ L G E+E L ++ + G+ P YN
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
++G + G L A + + + G+SPD TY+ +I R + L +M
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+QP+ F ++ ++ G+ +G Q ++LK+ G K
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
++G+F + A+ F+RM EP ++N +++ + G A +++ M+ +G
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
TY I I S+ R RLL M G N V + T+V + + G + A E
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCRE 219
+EM L P +N L++ ++G ++ + G+ P+L N I +
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGED 632
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
A L + G+ PDVVTY T++ L R + + +M+ G +PD
Sbjct: 633 RRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 45/318 (14%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
N+L++G + R + EA+ VF M +Y +P V ++ +M + + G +A
Sbjct: 500 NSLIDG--------WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
++ RM G+ D Y I +FC+ +P L+L M S + +A C VV
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD-IAVCNVVIHL 610
Query: 147 -YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
++ + A + F+ ++E + PD+ T+N ++ G C + E+E++ + PN
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 206 LFTYNIFIQGLCREGALDRAV-----------------------VFLGSVSREG------ 236
T I I LC+ +D A+ F SV EG
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 237 ------MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
+SP +V+Y+ +I GLC++ RV E+ H+ ++ L PD Y +I GYCK G
Sbjct: 731 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Query: 291 MVQDANRILKDAVFKGFK 308
+ +A + + + G K
Sbjct: 791 RLVEAALLYEHMLRNGVK 808
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY + Y + G + +F + + V +++ +++ V+ G A VY RM
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+G+ +V TYTI IK C+ GR + A + + G + V Y +++ GF + G+
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
L+++M++ PDV + LV GL K+G + + + K+L + + N+ +N
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I G CR D A+ + G+ PDV T+ TV+ + R+ E+ +M GL
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 273 QPDEFTYNTIIDGYCK 288
+PD Y T+ID +CK
Sbjct: 563 EPDALAYCTLIDAFCK 578
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%)
Query: 85 AHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA 144
A ++ + D G +V T+ I FC+ G A L + M G + +AY T++
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 145 GFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP 204
G+++ G + +LF + L + + DV F+ + K G + + + ++L +G+SP
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL 264
N+ TY I I+GLC++G + A G + + GM P +VTY+++I G C+ +
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 265 HKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
M+ G PD Y ++DG K+G++ A R
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 129/251 (51%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G++ A D+F+ M+ EP + +Y+ +++ + G HK++ + KGV DV +
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I + ++G A + + M G S N V Y ++ G + G A ++ ++L+
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + P + T++ L+ G CK G + L ++K G P++ Y + + GL ++G +
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+ F + + + +VV +N++I G CR +R E+ + M G++PD T+ T++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 285 GYCKKGMVQDA 295
+G +++A
Sbjct: 540 VSIMEGRLEEA 550
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 122/245 (49%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P+V ++ ++N + G ++A ++ M+ +G+ D+ Y+ I + + G +L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
G + V + + + + + GD A ++ ML + + P+V T+ L+ GLC+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + E+ + ++LKRG+ P++ TY+ I G C+ G L + + G PDVV
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
Y ++ GL ++ ++ + KM+ ++ + +N++IDG+C+ +A ++ +
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 304 FKGFK 308
G K
Sbjct: 524 IYGIK 528
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 135/263 (51%), Gaps = 2/263 (0%)
Query: 46 KVQEAVDVFERMDLYNCEPS-VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
+V D F+++ EPS V ++ +++ L G +A + + ++G + +
Sbjct: 196 RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSC 255
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+K + A RLL + G + N V +CT++ GF + G+ D A +LF M +
Sbjct: 256 NKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ 314
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + PD+ ++ L+ G K G + KL ++ L +GV ++ ++ I + G L
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A V + +G+SP+VVTY +I GLC+ R+ E+ +++ G++P TY+++ID
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 285 GYCKKGMVQDANRILKDAVFKGF 307
G+CK G ++ + +D + G+
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGY 457
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 35/274 (12%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
+V +N++++ F++A KV+ M G+ DV T+T ++ GR AL L
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM---------------------- 162
M G +A+AYCT++ F + + +LFD M
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 163 -------------LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTY 209
+E + PD+ T+N ++ G C + E+E++ + PN T
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
I I LC+ +D A+ ++ +G P+ VTY ++ + + S + +M
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
G+ P +Y+ IIDG CK+G V +A I A+
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 127/295 (43%), Gaps = 35/295 (11%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + G + A V++RM P+V +Y ++ L + G +A +Y ++ +G+
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+ TY+ I FC+ G + L +M G + V Y +V G + G A
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+ML +S+ +V FN L+ G C+ E+ K+ + G+ P++ T+ ++ EG
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEG 545
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRK-------------------------- 254
L+ A+ + + G+ PD + Y T+I C+
Sbjct: 546 RLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 605
Query: 255 ---------SRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
R+ ++ + + ++ ++PD TYNT+I GYC + +A RI +
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 125/276 (45%), Gaps = 21/276 (7%)
Query: 48 QEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM--------------K 93
A+ F ++ +PS ++ I ++L+ G F+ A KV+ M +
Sbjct: 84 NSALKYFRWAEISGKDPSFYT---IAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
D+ + +DV + + + CR G AL + + G + ++ D
Sbjct: 141 DRSLDADVCKFLM--ECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVD 198
Query: 154 LARELFDEMLERSLCPD-VATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
L + FD++ + P V+ ++ L KG V ++ V++RG + + N
Sbjct: 199 LIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKV 258
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
++GL + ++ A L V G +P+VVT+ T+I G C++ + + + M G+
Sbjct: 259 LKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI 317
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+PD Y+T+IDGY K GM+ +++ A+ KG K
Sbjct: 318 EPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 4/264 (1%)
Query: 39 RSYGRFGKVQEAVD-VFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
++Y R G A D + RM +P+V + I+N E G +A + + RMK+ GV
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+++ + IK F ++ M FG + V + T++ + GD E
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
++ +MLE + PD+ F+ L G + G ++E++LN++ K GV PN+ Y I G C
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Query: 218 REGALDRAV-VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
G + +A+ V+ G+SP++ TY T+I G + ++EE L M + P
Sbjct: 683 SAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTR 742
Query: 277 FTYNTIIDGYCKKGM--VQDANRI 298
T I DG+ G+ DAN +
Sbjct: 743 KTMQLIADGWKSIGVSNSNDANTL 766
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 125/234 (53%), Gaps = 2/234 (0%)
Query: 66 VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR 125
V S +MN L+E G +AH ++ + ++G + TYT + + R H+ L L+
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 126 NMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKG 185
+ G + + + ++ E G+ D A ++F++M E P +TFN L+ G K G
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 186 FVPESEKLLNKVLK-RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
+ ES +LL+ +L+ + PN T NI +Q C + ++ A + + G+ PDVVT+
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 245 NTVICGLCRKSRVVESEE-CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
NT+ R +E+ + +M+++ ++P+ T TI++GYC++G +++A R
Sbjct: 499 NTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALR 552
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 2/258 (0%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM-RMKDKGVGSDVYTY 104
K++EA ++ +M Y +P V ++N + G A + + RM V +V T
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC 534
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ +C G+ ALR M G N + +++ GF D D E+ D M E
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ PDV TF+ L++ G + E++ +L+ G+ P++ ++I +G R G ++
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQPDEFTYNTII 283
A L + + G+ P+VV Y +I G C + ++ + KM GL P+ TY T+I
Sbjct: 655 AEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Query: 284 DGYCKKGMVQDANRILKD 301
G+ + A +LKD
Sbjct: 715 WGFGEAKQPWKAEELLKD 732
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 144/303 (47%), Gaps = 7/303 (2%)
Query: 1 MLQKLGHHREFNQMENLLS--EMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
++ L + F+ + +L+S E + +L A + A G + +A+ +FE+M
Sbjct: 360 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINA---SSESGNLDQAMKIFEKMK 416
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVY-MRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
C+P+ ++N ++ + G ++ ++ M ++D+ + + T I ++++C +
Sbjct: 417 ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKI 476
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF-DEMLERSLCPDVATFNK 176
A ++ M +G + V + T+ + G A ++ ML + P+V T
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGT 536
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
+V+G C++G + E+ + ++ + GV PNLF +N I+G +D + + G
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
+ PDVVT++T++ + EE M+ G+ PD ++ + GY + G + A
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAE 656
Query: 297 RIL 299
+IL
Sbjct: 657 QIL 659
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 117/244 (47%), Gaps = 2/244 (0%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+ QEA +F + +PS+ +Y ++ L +F+ + +++ G+ D +
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF 392
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML- 163
I + +G A+++ M GC A + T++ G+ + G + + L D ML
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 452
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
+ L P+ T N LV C + + E+ ++ K+ GV P++ T+N + R G+
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTC 512
Query: 224 RAV-VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
A + + + + P+V T T++ G C + ++ E+ ++M G+ P+ F +N++
Sbjct: 513 TAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 283 IDGY 286
I G+
Sbjct: 573 IKGF 576
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 71/134 (52%)
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ C DV + KL++GL ++G E+ + N +++ G P+L TY + L R+
Sbjct: 314 TTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSL 373
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + V + G+ PD + +N +I + ++ + KM G +P T+NT+I G
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKG 433
Query: 286 YCKKGMVQDANRIL 299
Y K G +++++R+L
Sbjct: 434 YGKIGKLEESSRLL 447
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 43 RFGKVQEAVDVFERMDLYN-CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDV 101
+ G+++EA ++ RM L C P+ +YN +++ G A +V RMK+ + +V
Sbjct: 382 KVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
T + CR + A+ +M G N V Y T++ + + A +++
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
MLE PD + L+ GLC+ ++ +++ K+ + G S +L YN+ I C +
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
++ L + +EG PD +TYNT+I + E + +M DGL P TY
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 282 IIDGYCKKGMVQDANRILKD 301
+ID YC G + +A ++ KD
Sbjct: 622 VIDAYCSVGELDEALKLFKD 641
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 124/248 (50%), Gaps = 11/248 (4%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM- 127
+NA+++ L ++ + + ++M + + DV T I I + C++ R AL + M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 128 -------SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM-LERSLCPDVATFNKLVH 179
+V +++ + T++ G + G A EL M LE P+ T+N L+
Sbjct: 357 GKRTDDGNVIKA--DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLID 414
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
G C+ G + ++++++++ + + PN+ T N + G+CR L+ AVVF + +EG+
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+VVTY T+I C S V ++ KM+ G PD Y +I G C+ DA R++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 300 KDAVFKGF 307
+ GF
Sbjct: 535 EKLKEGGF 542
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 8/287 (2%)
Query: 30 LEGAYVEAMRS-YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV 88
LE A+ S GR + D+ +MD P V + ++N L + ++A +V
Sbjct: 292 LEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 89 YMRMKDKG------VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFG-CSFNAVAYCT 141
+ +M+ K + +D + I C+ GR A LL M + C+ NAV Y
Sbjct: 352 FEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNC 411
Query: 142 VVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG 201
++ G+ G + A+E+ M E + P+V T N +V G+C+ + + + K G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 202 VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESE 261
V N+ TY I C +++A+ + + G SPD Y +I GLC+ R ++
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 262 ECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ K+ G D YN +I +C K + +L D +G K
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKK 578
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 48/297 (16%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK-- 95
+R +GR G V ++V V+ER+D N + S N ++++L+ G + A KV M K
Sbjct: 159 IRWFGRMGMVNQSVLVYERLD-SNMKNS-QVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216
Query: 96 -------------------------------------GVGSDVYTYTIRIKSFCRTGRPH 118
GV + T I S C+ R +
Sbjct: 217 VFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARAN 276
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
AA +L ++ A + +++ D +L +M E + PDV T L+
Sbjct: 277 AAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILI 336
Query: 179 HGLCKKGFVPES----EKLLNKVLKRG--VSPNLFTYNIFIQGLCREGALDRAVVFLGSV 232
+ LCK V E+ EK+ K G + + +N I GLC+ G L A L +
Sbjct: 337 NTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 233 S-REGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
E +P+ VTYN +I G CR ++ ++E + +M D ++P+ T NTI+ G C+
Sbjct: 397 KLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y R GK++ A +V RM +P+V + N I+ + N A +M M+ +GV +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
V TY I + C A+ M GCS +A Y +++G + A + +
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
++ E D+ +N L+ C K + ++L + K G P+ TYN I +
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM-VNDGLQPDEFTY 279
+ + + +G+ P V TY VI C + E+ + M ++ + P+ Y
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 280 NTIIDGYCKKG 290
N +I+ + K G
Sbjct: 656 NILINAFSKLG 666
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 1/239 (0%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
V++A+ +E+M C P Y A+++ L + + A +V ++K+ G D+ Y +
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I FC +L +M G +++ Y T+++ F + D + + ++M E
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKV-LKRGVSPNLFTYNIFIQGLCREGALDRA 225
L P V T+ ++ C G + E+ KL + L V+PN YNI I + G +A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+ + + + P+V TYN + L K++ + + +MV +P++ T +++
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 126/313 (40%), Gaps = 62/313 (19%)
Query: 43 RFGKVQEAVDVFERMDL--YNCEPSVHSYNAIMNILVEFG-----YFNQAHKVYMRMKDK 95
R G A+ FE +D + + S + + ++EF ++ ++Y K+K
Sbjct: 87 RLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEIAKEK 146
Query: 96 GVGSDVYTYTIRIKSFCRTGRPHAAL----RLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
+ V + I+ F R G + ++ RL NM N+ VV G
Sbjct: 147 NIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMK------NSQVRNVVVDVLLRNGL 200
Query: 152 RDLARELFDEMLERS--LCPDVATFNKLVHGLCKKGFVPESE--KLLNKVLKRGVSPNLF 207
D A ++ DEML++ P+ T + ++H + K + E + L+++ GVSPN
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSV 260
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSRE-------------------------------- 235
FI LC+ + A L + +
Sbjct: 261 WLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 236 ---GMSPDVVTYNTVICGLCRKSRVVESEECLHKM----VNDG--LQPDEFTYNTIIDGY 286
+ PDVVT +I LC+ RV E+ E KM +DG ++ D +NT+IDG
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 287 CKKGMVQDANRIL 299
CK G +++A +L
Sbjct: 381 CKVGRLKEAEELL 393
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
+P +YN +++ + F ++ +M++ G+ V TY I ++C G AL+
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 123 LLRNMSVFG-CSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGL 181
L ++M + + N V Y ++ F + G+ A L +EM + + P+V T+N L L
Sbjct: 638 LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
+K KL+++++++ PN T I ++ L
Sbjct: 698 NEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 6 GHHREFNQMENLLSEMRAT-LENNLLE-GAYVEAMRSYGRFGKVQEAVDVFERMDLYN-C 62
G H++F +E ++ +MR L+ + GA ++A Y G++ EA+ +F+ M L++
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA---YCSVGELDEALKLFKDMGLHSKV 648
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
P+ YN ++N + G F QA + MK K V +V TY K + L+
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 123 LLRNMSVFGCSFNAVA 138
L+ M C N +
Sbjct: 709 LMDEMVEQSCEPNQIT 724
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 140/300 (46%), Gaps = 6/300 (2%)
Query: 2 LQKLGHHREFNQMENLL-SEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
L + GH R +Q+ L+ S+ R E + M + R G V+E+M +
Sbjct: 168 LNRNGHFRAADQLPELMDSQGRPPSEKQF---EILIRMHADNRRG--LRVYYVYEKMKKF 222
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+P V YN IM+ LV+ GYF+ A VY K+ G+ + T+ I +K C+ GR
Sbjct: 223 GFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEM 282
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
L +L+ M C + AY ++ G+ D + ++DEM + PDV + LV G
Sbjct: 283 LEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVG 342
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
LCK G V +L ++ + + + Y + I+G +G + A + G D
Sbjct: 343 LCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIAD 402
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+ YN VI GLC ++V ++ + + + L+PD T + I+ Y + D + +L+
Sbjct: 403 IGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLE 462
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 108/240 (45%)
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+YNA L G+F A ++ M +G + I I+ R + M
Sbjct: 160 AYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKM 219
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
FG Y ++ + G DLA ++++ E L + TF LV GLCK G +
Sbjct: 220 KKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRI 279
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
E ++L ++ + P++F Y I+ L EG LD ++ + R+ + PDV+ Y T+
Sbjct: 280 EEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTL 339
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+ GLC+ RV E +M + D Y +I+G+ G V+ A + +D V G+
Sbjct: 340 VVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGY 399
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 10/275 (3%)
Query: 32 GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMR 91
G Y ++ +V +A +F+ EP + + IM V + V R
Sbjct: 404 GIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLER 463
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHA-ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
+ + G Y T K C +A AL + + G +V Y ++ Y+ G
Sbjct: 464 IGELGYPVSDYL-TQFFKLLCADEEKNAMALDVFYILKTKGHGSVSV-YNILMEALYKMG 521
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
D + LF EM + PD ++++ + +KG V + K+++ P++ Y
Sbjct: 522 DIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYL 581
Query: 211 IFIQGLCREGALDRAVVF----LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
+GLC+ G +D ++ LG+V P Y +C +C+ S + + + +
Sbjct: 582 SLTKGLCQIGEIDAVMLLVRECLGNVES---GPMEFKYALTVCHVCKGSNAEKVMKVVDE 638
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
M +G+ +E Y II G K G ++ A + +
Sbjct: 639 MNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTE 673
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 36/204 (17%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
SV YN +M L + G ++ ++ M+ G D +Y+I I F G AA
Sbjct: 506 SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAA---- 561
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
CSF+ ++++E S P +A + L GLC+
Sbjct: 562 -------CSFH------------------------EKIIEMSCVPSIAAYLSLTKGLCQI 590
Query: 185 GFVPESEKLLNKVLKRGVS-PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + L+ + L S P F Y + + +C+ ++ + + +++EG+ + V
Sbjct: 591 GEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVI 650
Query: 244 YNTVICGLCRKSRVVESEECLHKM 267
Y +I G+ + + + E ++
Sbjct: 651 YCAIISGMSKHGTIKVAREVFTEL 674
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 43 RFGKVQEAVDVFERMDLYN-CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDV 101
+ G+++EA ++ RM L C P+ +YN +++ G A +V RMK+ + +V
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
T + CR + A+ +M G N V Y T++ + + A +++
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
MLE PD + L+ GLC+ ++ +++ K+ + G S +L YN+ I C +
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
++ L + +EG PD +TYNT+I + E + +M DGL P TY
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 282 IIDGYCKKGMVQDANRILKD 301
+ID YC G + +A ++ KD
Sbjct: 622 VIDAYCSVGELDEALKLFKD 641
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 124/248 (50%), Gaps = 11/248 (4%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM- 127
+NA+++ L ++ + + ++M + + DV T I I + C++ R AL + M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 128 -------SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM-LERSLCPDVATFNKLVH 179
+V +++ + T++ G + G A EL M LE P+ T+N L+
Sbjct: 357 GKRTDDGNVIKA--DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
G C+ G + ++++++++ + + PN+ T N + G+CR L+ AVVF + +EG+
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+VVTY T+I C S V ++ KM+ G PD Y +I G C+ DA R++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 300 KDAVFKGF 307
+ GF
Sbjct: 535 EKLKEGGF 542
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 8/287 (2%)
Query: 30 LEGAYVEAMRS-YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV 88
LE A+ S GR + D+ +MD P V + ++N L + ++A +V
Sbjct: 292 LEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 89 YMRMKDKG------VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFG-CSFNAVAYCT 141
+ +M+ K + +D + I C+ GR A LL M + C NAV Y
Sbjct: 352 FEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNC 411
Query: 142 VVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG 201
++ G+ G + A+E+ M E + P+V T N +V G+C+ + + + K G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 202 VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESE 261
V N+ TY I C +++A+ + + G SPD Y +I GLC+ R ++
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 262 ECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ K+ G D YN +I +C K + +L D +G K
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 135/276 (48%), Gaps = 19/276 (6%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG- 96
+R +GR G V ++V V+ER+D N + S N ++++L+ G + A KV M K
Sbjct: 159 IRWFGRMGMVNQSVLVYERLD-SNMKNS-QVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216
Query: 97 ------VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
+ +D+ + + + R + L+ S G S N+V ++ +
Sbjct: 217 VFPPNRITADIVLHEVWKE---RLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
+ A ++ ++++ + FN L+ L + + L+ K+ + + P++ T
Sbjct: 274 RANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 211 IFIQGLCREGALDRAV-VF---LGSVSREG--MSPDVVTYNTVICGLCRKSRVVESEECL 264
I I LC+ +D A+ VF G + +G + D + +NT+I GLC+ R+ E+EE L
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 265 HKM-VNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+M + + P+ TYN +IDGYC+ G ++ A ++
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y R GK++ A +V RM +P+V + N I+ + N A +M M+ +GV +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
V TY I + C A+ M GCS +A Y +++G + A + +
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
++ E D+ +N L+ C K + ++L + K G P+ TYN I +
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM-VNDGLQPDEFTY 279
+ + + +G+ P V TY VI C + E+ + M ++ + P+ Y
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 280 NTIIDGYCKKG 290
N +I+ + K G
Sbjct: 656 NILINAFSKLG 666
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 1/211 (0%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
V++A+ +E+M C P Y A+++ L + + A +V ++K+ G D+ Y +
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I FC +L +M G +++ Y T+++ F + D + + ++M E
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKV-LKRGVSPNLFTYNIFIQGLCREGALDRA 225
L P V T+ ++ C G + E+ KL + L V+PN YNI I + G +A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSR 256
+ + + + P+V TYN + L K++
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 127/313 (40%), Gaps = 62/313 (19%)
Query: 43 RFGKVQEAVDVFERMDL--YNCEPSVHSYNAIMNILVEFG-----YFNQAHKVYMRMKDK 95
R G A+ FE +D + + S + + ++EF ++ ++Y K+K
Sbjct: 87 RLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEIAKEK 146
Query: 96 GVGSDVYTYTIRIKSFCRTGRPHAAL----RLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
+ + + I+ F R G + ++ RL NM N+ VV G
Sbjct: 147 NIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMK------NSQVRNVVVDVLLRNGL 200
Query: 152 RDLARELFDEMLERS--LCPDVATFNKLVHGLCKKGFVPESE--KLLNKVLKRGVSPNLF 207
D A ++ DEML++ P+ T + ++H + K+ + E + L+++ GVSPN
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSRE-------------------------------- 235
FI LC+ + A L + +
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 236 ---GMSPDVVTYNTVICGLCRKSRVVESEECLHKM----VNDG--LQPDEFTYNTIIDGY 286
+ PDVVT +I LC+ RV E+ E +M +DG ++ D +NT+IDG
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 287 CKKGMVQDANRIL 299
CK G +++A +L
Sbjct: 381 CKVGRLKEAEELL 393
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 6 GHHREFNQMENLLSEMRAT-LENNLLE-GAYVEAMRSYGRFGKVQEAVDVFERMDLYN-C 62
G H++F +E ++ +MR L+ + GA ++A Y G++ EA+ +F+ M L++
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA---YCSVGELDEALKLFKDMGLHSKV 648
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
P+ YN ++N + G F QA + MK K V +V TY K + L+
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 123 LLRNM 127
L+ M
Sbjct: 709 LMDEM 713
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 43 RFGKVQEAVDVFERMDLYN-CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDV 101
+ G+++EA ++ RM L C P+ +YN +++ G A +V RMK+ + +V
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
T + CR + A+ +M G N V Y T++ + + A +++
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
MLE PD + L+ GLC+ ++ +++ K+ + G S +L YN+ I C +
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
++ L + +EG PD +TYNT+I + E + +M DGL P TY
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 282 IIDGYCKKGMVQDANRILKD 301
+ID YC G + +A ++ KD
Sbjct: 622 VIDAYCSVGELDEALKLFKD 641
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 124/248 (50%), Gaps = 11/248 (4%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM- 127
+NA+++ L ++ + + ++M + + DV T I I + C++ R AL + M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 128 -------SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM-LERSLCPDVATFNKLVH 179
+V +++ + T++ G + G A EL M LE P+ T+N L+
Sbjct: 357 GKRTDDGNVIKA--DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
G C+ G + ++++++++ + + PN+ T N + G+CR L+ AVVF + +EG+
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+VVTY T+I C S V ++ KM+ G PD Y +I G C+ DA R++
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 300 KDAVFKGF 307
+ GF
Sbjct: 535 EKLKEGGF 542
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 8/287 (2%)
Query: 30 LEGAYVEAMRS-YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV 88
LE A+ S GR + D+ +MD P V + ++N L + ++A +V
Sbjct: 292 LEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 89 YMRMKDKG------VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFG-CSFNAVAYCT 141
+ +M+ K + +D + I C+ GR A LL M + C NAV Y
Sbjct: 352 FEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNC 411
Query: 142 VVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG 201
++ G+ G + A+E+ M E + P+V T N +V G+C+ + + + K G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 202 VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESE 261
V N+ TY I C +++A+ + + G SPD Y +I GLC+ R ++
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 262 ECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ K+ G D YN +I +C K + +L D +G K
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 19/276 (6%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG- 96
+R +GR G V ++V V+ER+D V N ++++L+ G + A KV M K
Sbjct: 159 IRWFGRMGMVNQSVLVYERLDSNMKNSQVR--NVVVDVLLRNGLVDDAFKVLDEMLQKES 216
Query: 97 ------VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
+ +D+ + + + R + L+ S G S N+V ++ +
Sbjct: 217 VFPPNRITADIVLHEVWKE---RLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
+ A ++ ++++ + FN L+ L + + L+ K+ + + P++ T
Sbjct: 274 RANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 211 IFIQGLCREGALDRAV-VF---LGSVSREG--MSPDVVTYNTVICGLCRKSRVVESEECL 264
I I LC+ +D A+ VF G + +G + D + +NT+I GLC+ R+ E+EE L
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 265 HKM-VNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+M + + P+ TYN +IDGYC+ G ++ A ++
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y R GK++ A +V RM +P+V + N I+ + N A +M M+ +GV +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
V TY I + C A+ M GCS +A Y +++G + A + +
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
++ E D+ +N L+ C K + ++L + K G P+ TYN I +
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM-VNDGLQPDEFTY 279
+ + + +G+ P V TY VI C + E+ + M ++ + P+ Y
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 280 NTIIDGYCKKG 290
N +I+ + K G
Sbjct: 656 NILINAFSKLG 666
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 1/239 (0%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
V++A+ +E+M C P Y A+++ L + + A +V ++K+ G D+ Y +
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I FC +L +M G +++ Y T+++ F + D + + ++M E
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKV-LKRGVSPNLFTYNIFIQGLCREGALDRA 225
L P V T+ ++ C G + E+ KL + L V+PN YNI I + G +A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+ + + + P+V TYN + L K++ + + +MV +P++ T +++
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 127/313 (40%), Gaps = 62/313 (19%)
Query: 43 RFGKVQEAVDVFERMDL--YNCEPSVHSYNAIMNILVEFG-----YFNQAHKVYMRMKDK 95
R G A+ FE +D + + S + + ++EF ++ ++Y K+K
Sbjct: 87 RLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEIAKEK 146
Query: 96 GVGSDVYTYTIRIKSFCRTGRPHAAL----RLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
+ + + I+ F R G + ++ RL NM N+ VV G
Sbjct: 147 NIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMK------NSQVRNVVVDVLLRNGL 200
Query: 152 RDLARELFDEMLERS--LCPDVATFNKLVHGLCKKGFVPESE--KLLNKVLKRGVSPNLF 207
D A ++ DEML++ P+ T + ++H + K+ + E + L+++ GVSPN
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSRE-------------------------------- 235
FI LC+ + A L + +
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 236 ---GMSPDVVTYNTVICGLCRKSRVVESEECLHKM----VNDG--LQPDEFTYNTIIDGY 286
+ PDVVT +I LC+ RV E+ E +M +DG ++ D +NT+IDG
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 287 CKKGMVQDANRIL 299
CK G +++A +L
Sbjct: 381 CKVGRLKEAEELL 393
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 8/196 (4%)
Query: 29 LLEGAYVEAMRSY----GRFGKVQEAVDVFER---MDLYNCEPSVHSYNAIMNILVEFGY 81
L EG + + +Y G F A V+E M+ +P +YN +++ +
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 82 FNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFG-CSFNAVAYC 140
F ++ +M++ G+ V TY I ++C G AL+L ++M + + N V Y
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYN 656
Query: 141 TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR 200
++ F + G+ A L +EM + + P+V T+N L L +K KL+++++++
Sbjct: 657 ILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Query: 201 GVSPNLFTYNIFIQGL 216
PN T I ++ L
Sbjct: 717 SCEPNQITMEILMERL 732
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 6 GHHREFNQMENLLSEMRAT-LENNLLE-GAYVEAMRSYGRFGKVQEAVDVFERMDLYN-C 62
G H++F +E ++ +MR L+ + GA ++A Y G++ EA+ +F+ M L++
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA---YCSVGELDEALKLFKDMGLHSKV 648
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
P+ YN ++N + G F QA + MK K V +V TY K + L+
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 123 LLRNMSVFGCSFNAVA 138
L+ M C N +
Sbjct: 709 LMDEMVEQSCEPNQIT 724
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
S G G ++AV F + +N P HSYNAI+N L+ + VY +M + G
Sbjct: 193 SCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSP 252
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR-EL 158
DV TY I + + R G+ RL M+ G S ++ Y ++ G++ LA
Sbjct: 253 DVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTY-NILLHILGKGNKPLAALTT 311
Query: 159 FDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCR 218
+ M E + P V + L+ GL + G + + L++++K G P++ Y + I G
Sbjct: 312 LNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVV 371
Query: 219 EGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFT 278
G LD+A ++ +G P+V TYN++I GLC E+ L +M + G P+
Sbjct: 372 SGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVV 431
Query: 279 YNTIIDGYCKKGMVQDANRILKDAVFKG 306
Y+T++ K G + +A +++++ V KG
Sbjct: 432 YSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 85/204 (41%), Gaps = 35/204 (17%)
Query: 138 AYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV-----HGLCKKGFVP---- 188
+Y ++ F E G+ L DEM++ TFN L+ GL K+ V
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 189 ----------------------ESEKLLNKVLKR----GVSPNLFTYNIFIQGLCREGAL 222
+ KL+ V K+ G SP++ TYNI + R G +
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
DR ++R+G SPD TYN ++ L + ++ + + L+ M G+ P Y T+
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 283 IDGYCKKGMVQDANRILKDAVFKG 306
IDG + G ++ L + V G
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAG 354
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y + R G ++ + M C P V Y ++ V G ++A +++ M
Sbjct: 327 YTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMT 386
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
KG +V+TY I+ C G A LL+ M GC+ N V Y T+V+ + G
Sbjct: 387 VKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLS 446
Query: 154 LARELFDEMLER 165
AR++ EM+++
Sbjct: 447 EARKVIREMVKK 458
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 2/266 (0%)
Query: 42 GRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDV 101
G G ++ V+ F + +N P HSYNAI++ L+ + VY +M + G DV
Sbjct: 198 GEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDV 257
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR-ELFD 160
TY I + + R G+ RLL M G S + Y ++ G++ LA L +
Sbjct: 258 LTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTY-NILLHHLATGNKPLAALNLLN 316
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
M E + P V F L+ GL + G + + +++ +K G +P++ Y + I G G
Sbjct: 317 HMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGG 376
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
L++A ++ +G P+V TYN++I G C + E+ L +M + G P+ Y+
Sbjct: 377 ELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYS 436
Query: 281 TIIDGYCKKGMVQDANRILKDAVFKG 306
T+++ G V +A+ ++KD V KG
Sbjct: 437 TLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 35/207 (16%)
Query: 135 NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE----- 189
A Y ++ F E G+ L DEM++ TFN L+ + G +
Sbjct: 151 TANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQF 210
Query: 190 --------------------------SEKLLNKV----LKRGVSPNLFTYNIFIQGLCRE 219
KL++ V L+ G +P++ TYNI + R
Sbjct: 211 IKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRL 270
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTY 279
G DR L + ++G SPD+ TYN ++ L ++ + + L+ M G++P +
Sbjct: 271 GKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHF 330
Query: 280 NTIIDGYCKKGMVQDANRILKDAVFKG 306
T+IDG + G ++ + + V G
Sbjct: 331 TTLIDGLSRAGKLEACKYFMDETVKVG 357
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 148/316 (46%), Gaps = 15/316 (4%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M++ H +Q L EM+ E Y + ++GR G+ + A+++ + M
Sbjct: 17 MIRLHARHNWVDQARGLFFEMQKWSCKPDAE-TYDALINAHGRAGQWRWAMNLMDDMLRA 75
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
PS +YN ++N G + +A +V +M D GVG D+ T+ I + ++ ++GR ++
Sbjct: 76 AIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQYSK 134
Query: 121 ----LRLLRNMSVF--GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE-RSLC-PDVA 172
L++ V +FN + YC + G A +LF+ M E R+ C PDV
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYC-----LSKLGQSSQALDLFNSMREKRAECRPDVV 189
Query: 173 TFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV 232
TF ++H KG + + ++ G+ PN+ +YN + G A+ LG +
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249
Query: 233 SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
+ G+ PDVV+Y ++ R + +++E M + +P+ TYN +ID Y G +
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 309
Query: 293 QDANRILKDAVFKGFK 308
+A I + G K
Sbjct: 310 AEAVEIFRQMEQDGIK 325
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 2/305 (0%)
Query: 2 LQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYN 61
L KLG + + N + E RA +++ + M Y G+++ VFE M
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVV--TFTSIMHLYSVKGEIENCRAVFEAMVAEG 218
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAAL 121
+P++ SYNA+M G A V +K G+ DV +YT + S+ R+ +P A
Sbjct: 219 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 278
Query: 122 RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGL 181
+ M N V Y ++ + G A E+F +M + + P+V + L+
Sbjct: 279 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
+ + +L+ RG++ N YN I L++A+ S+ ++ + D
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 398
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
VT+ +I G CR S+ E+ L +M + + + Y++++ Y K+G V +A I
Sbjct: 399 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 458
Query: 302 AVFKG 306
G
Sbjct: 459 MKMAG 463
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 115/258 (44%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y + SYGR + +A +VF M +P+V +YNA+++ G+ +A +++ +M
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G+ +V + + + R+ + +L G + N AY + + + +
Sbjct: 320 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 379
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ A L+ M ++ + D TF L+ G C+ PE+ L ++ + Y+
Sbjct: 380 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 439
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ ++G + A + G PDV+ Y +++ + ++ E +M +G+
Sbjct: 440 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 499
Query: 273 QPDEFTYNTIIDGYCKKG 290
+PD + ++ + K G
Sbjct: 500 EPDSIACSALMRAFNKGG 517
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%)
Query: 29 LLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV 88
L + Y + +Y + G+V EA +F +M + CEP V +Y ++++ + +A ++
Sbjct: 431 LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACEL 490
Query: 89 YMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYE 148
++ M+ G+ D + +++F + G+P L+ M F + + +
Sbjct: 491 FLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNT 550
Query: 149 FGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFT 208
+ A +L M + N+++H K G V KL K++ GV NL T
Sbjct: 551 LQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKT 610
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
Y I ++ L G + + L +S G+ P Y +I
Sbjct: 611 YAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 650
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 4/212 (1%)
Query: 99 SDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAREL 158
+D+Y IR+ + R A L M + C +A Y ++ G A L
Sbjct: 11 NDIYNMMIRLHA--RHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNL 68
Query: 159 FDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCR 218
D+ML ++ P +T+N L++ G E+ ++ K+ GV P+L T+NI +
Sbjct: 69 MDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKS 128
Query: 219 EGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ--PDE 276
+A+ + + + PD T+N +I L + + ++ + + M + PD
Sbjct: 129 GRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV 188
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
T+ +I+ Y KG +++ + + V +G K
Sbjct: 189 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 148/316 (46%), Gaps = 15/316 (4%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M++ H +Q L EM+ E Y + ++GR G+ + A+++ + M
Sbjct: 149 MIRLHARHNWVDQARGLFFEMQKWSCKPDAE-TYDALINAHGRAGQWRWAMNLMDDMLRA 207
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
PS +YN ++N G + +A +V +M D GVG D+ T+ I + ++ ++GR ++
Sbjct: 208 AIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQYSK 266
Query: 121 ----LRLLRNMSVF--GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE-RSLC-PDVA 172
L++ V +FN + YC + G A +LF+ M E R+ C PDV
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYC-----LSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 173 TFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV 232
TF ++H KG + + ++ G+ PN+ +YN + G A+ LG +
Sbjct: 322 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 381
Query: 233 SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
+ G+ PDVV+Y ++ R + +++E M + +P+ TYN +ID Y G +
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 293 QDANRILKDAVFKGFK 308
+A I + G K
Sbjct: 442 AEAVEIFRQMEQDGIK 457
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 2/305 (0%)
Query: 2 LQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYN 61
L KLG + + N + E RA +++ + M Y G+++ VFE M
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVV--TFTSIMHLYSVKGEIENCRAVFEAMVAEG 350
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAAL 121
+P++ SYNA+M G A V +K G+ DV +YT + S+ R+ +P A
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 122 RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGL 181
+ M N V Y ++ + G A E+F +M + + P+V + L+
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
+ + +L+ RG++ N YN I L++A+ S+ ++ + D
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
VT+ +I G CR S+ E+ L +M + + + Y++++ Y K+G V +A I
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 302 AVFKG 306
G
Sbjct: 591 MKMAG 595
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 115/258 (44%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y + SYGR + +A +VF M +P+V +YNA+++ G+ +A +++ +M
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G+ +V + + + R+ + +L G + N AY + + + +
Sbjct: 452 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ A L+ M ++ + D TF L+ G C+ PE+ L ++ + Y+
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 571
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ ++G + A + G PDV+ Y +++ + ++ E +M +G+
Sbjct: 572 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Query: 273 QPDEFTYNTIIDGYCKKG 290
+PD + ++ + K G
Sbjct: 632 EPDSIACSALMRAFNKGG 649
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%)
Query: 29 LLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV 88
L + Y + +Y + G+V EA +F +M + CEP V +Y ++++ + +A ++
Sbjct: 563 LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACEL 622
Query: 89 YMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYE 148
++ M+ G+ D + +++F + G+P L+ M F + + +
Sbjct: 623 FLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNT 682
Query: 149 FGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFT 208
+ A +L M + N+++H K G V KL K++ GV NL T
Sbjct: 683 LQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKT 742
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
Y I ++ L G + + L +S G+ P Y +I
Sbjct: 743 YAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 782
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 4/212 (1%)
Query: 99 SDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAREL 158
+D+Y IR+ + R A L M + C +A Y ++ G A L
Sbjct: 143 NDIYNMMIRLHA--RHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNL 200
Query: 159 FDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCR 218
D+ML ++ P +T+N L++ G E+ ++ K+ GV P+L T+NI +
Sbjct: 201 MDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKS 260
Query: 219 EGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ--PDE 276
+A+ + + + PD T+N +I L + + ++ + + M + PD
Sbjct: 261 GRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV 320
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
T+ +I+ Y KG +++ + + V +G K
Sbjct: 321 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 147/296 (49%), Gaps = 7/296 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
M+ LG ++F + LL EM R + N + Y + SYGR + EA++VF +M
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTV--TYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
C+P +Y +++I + G+ + A +Y RM+ G+ D +TY++ I + G A
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A +L M GC+ N V Y ++ + + A +L+ +M PD T++ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
L G++ E+E + ++ ++ P+ Y + + + G +++A + ++ G+ P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII----DGYCKKGM 291
+V T N+++ R +++ E+ E L M+ GL+P TY ++ DG K M
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 663
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 111/242 (45%)
Query: 67 HSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRN 126
H+Y ++ L F +K+ M G + TY I S+ R + A+ +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 127 MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF 186
M GC + V YCT++ + G D+A +++ M L PD T++ +++ L K G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
+P + KL +++ +G +PNL TYNI + + A+ + G PD VTY+
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
V+ L + E+E +M PDE Y ++D + K G V+ A + + + G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 307 FK 308
+
Sbjct: 605 LR 606
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 17/270 (6%)
Query: 43 RFGKVQEAV--DVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
R+G E ++ R+D Y + N N L G+F Y + G D
Sbjct: 313 RWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNAL---GFF------YWLKRQPGFKHD 363
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+TYT + + R + A +LL M GC N V Y ++ + + A +F+
Sbjct: 364 GHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+M E PD T+ L+ K GF+ + + ++ G+SP+ FTY++ I L + G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK-MVNDGLQPDEFTY 279
L A + +G +P++VTYN ++ L K+R ++ L++ M N G +PD+ TY
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 280 NTIID--GYCKKGMVQDANRILKDAVFKGF 307
+ +++ G+C G +++A + + K +
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNW 570
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 84 QAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVV 143
QA++V +M D G + + R F G Y T+V
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGH---------------------TYTTMV 371
Query: 144 AGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVS 203
+L DEM+ P+ T+N+L+H + ++ E+ + N++ + G
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEEC 263
P+ TY I + G LD A+ + G+SPD TY+ +I L + + + +
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 264 LHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+MV+ G P+ TYN ++D + K Q+A ++ +D GF+
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%)
Query: 85 AHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA 144
A ++ + D G +V T+ I FC+ G A L + M G + +AY T++
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 145 GFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP 204
G+++ G + +LF + L + + DV F+ + K G + + + ++L +G+SP
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL 264
N+ TY I I+GLC++G + A G + + GM P +VTY+++I G C+ +
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 265 HKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
M+ G PD Y ++DG K+G++ A R
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 127/250 (50%), Gaps = 6/250 (2%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G++ A D+F+ M+ EP + +Y+ +++ + G HK++ + KGV DV +
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I + ++G A + + M G S N V Y ++ G + G A ++ ++L+
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + P + T++ L+ G CK G + L ++K G P++ Y + + GL ++G +
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII- 283
A+ F + + + +VV +N++I G CR +R E+ + M G++PD T+ T++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 284 -----DGYCK 288
D +CK
Sbjct: 540 VSIMEDAFCK 549
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 122/245 (49%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P+V ++ ++N + G ++A ++ M+ +G+ D+ Y+ I + + G +L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
G + V + + + + + GD A ++ ML + + P+V T+ L+ GLC+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + E+ + ++LKRG+ P++ TY+ I G C+ G L + + G PDVV
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
Y ++ GL ++ ++ + KM+ ++ + +N++IDG+C+ +A ++ +
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 304 FKGFK 308
G K
Sbjct: 524 IYGIK 528
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 135/263 (51%), Gaps = 2/263 (0%)
Query: 46 KVQEAVDVFERMDLYNCEPS-VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
+V D F+++ EPS V ++ +++ L G +A + + ++G + +
Sbjct: 196 RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSC 255
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+K + A RLL + G + N V +CT++ GF + G+ D A +LF M +
Sbjct: 256 NKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ 314
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + PD+ ++ L+ G K G + KL ++ L +GV ++ ++ I + G L
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A V + +G+SP+VVTY +I GLC+ R+ E+ +++ G++P TY+++ID
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 285 GYCKKGMVQDANRILKDAVFKGF 307
G+CK G ++ + +D + G+
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGY 457
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 131/288 (45%), Gaps = 14/288 (4%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
N+L++G + R + EA+ VF M +Y +P V ++ +M + + F +
Sbjct: 500 NSLIDG--------WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 87 K------VYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYC 140
K ++ M+ + +D+ + I + R A + N+ + V Y
Sbjct: 552 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 141 TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR 200
T++ G+ D A +F+ + P+ T L+H LCK + + ++ + + ++
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 201 GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
G PN TY + + ++ + + +G+SP +V+Y+ +I GLC++ RV E+
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Query: 261 EECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
H+ ++ L PD Y +I GYCK G + +A + + + G K
Sbjct: 732 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 140/317 (44%), Gaps = 43/317 (13%)
Query: 25 LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQ 84
+E +L+ AY + Y + G + +F + + V +++ +++ V+ G
Sbjct: 317 IEPDLI--AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 85 AHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA 144
A VY RM +G+ +V TYTI IK C+ GR + A + + G + V Y +++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 145 GFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP 204
GF + G+ L+++M++ PDV + LV GL K+G + + + K+L + +
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV----------------- 247
N+ +N I G CR D A+ + G+ PDV T+ TV
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT 554
Query: 248 -------------------ICG-----LCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
+C L + R+ ++ + + ++ ++PD TYNT+I
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 284 DGYCKKGMVQDANRILK 300
GYC + +A RI +
Sbjct: 615 CGYCSLRRLDEAERIFE 631
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 99/195 (50%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
++++A F + EP + +YN ++ ++A +++ +K G + T T
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I I C+ A+R+ M+ G NAV Y ++ F + D + + +LF+EM E+
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
+ P + +++ ++ GLCK+G V E+ + ++ + + P++ Y I I+G C+ G L A
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Query: 226 VVFLGSVSREGMSPD 240
+ + R G+ PD
Sbjct: 767 ALLYEHMLRNGVKPD 781
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 113/250 (45%), Gaps = 7/250 (2%)
Query: 28 NLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHK 87
+++E A+ + M K + +F+ M + N ++++L + A K
Sbjct: 541 SIMEDAFCKHM-------KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 593
Query: 88 VYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFY 147
+ + + + D+ TY I +C R A R+ + V N V ++
Sbjct: 594 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 653
Query: 148 EFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
+ D D A +F M E+ P+ T+ L+ K + S KL ++ ++G+SP++
Sbjct: 654 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 713
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
+Y+I I GLC+ G +D A + PDVV Y +I G C+ R+VE+ M
Sbjct: 714 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Query: 268 VNDGLQPDEF 277
+ +G++PD+
Sbjct: 774 LRNGVKPDDL 783
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 125/276 (45%), Gaps = 21/276 (7%)
Query: 48 QEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM--------------K 93
A+ F ++ +PS ++ I ++L+ G F+ A KV+ M +
Sbjct: 84 NSALKYFRWAEISGKDPSFYT---IAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
D+ + +DV + + + CR G AL + + G + ++ D
Sbjct: 141 DRSLDADVCKFLM--ECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVD 198
Query: 154 LARELFDEMLERSLCPD-VATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
L + FD++ + P V+ ++ L KG V ++ V++RG + + N
Sbjct: 199 LIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKV 258
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
++GL + ++ A L V G +P+VVT+ T+I G C++ + + + M G+
Sbjct: 259 LKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI 317
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+PD Y+T+IDGY K GM+ +++ A+ KG K
Sbjct: 318 EPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 27 NNLLEG-------AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEF 79
NNL+EG Y + Y ++ EA +FE + + P+ + ++++L +
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655
Query: 80 GYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAY 139
+ A +++ M +KG + TY + F ++ + +L M G S + V+Y
Sbjct: 656 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 715
Query: 140 CTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
++ G + G D A +F + ++ L PDV + L+ G CK G + E+ L +L+
Sbjct: 716 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 775
Query: 200 RGVSPN 205
GV P+
Sbjct: 776 NGVKPD 781
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 147/296 (49%), Gaps = 7/296 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
M+ LG ++F + LL EM R + N + Y + SYGR + EA++VF +M
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTV--TYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
C+P +Y +++I + G+ + A +Y RM+ G+ D +TY++ I + G A
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A +L M GC+ N V Y ++ + + A +L+ +M PD T++ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
L G++ E+E + ++ ++ P+ Y + + + G +++A + ++ G+ P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII----DGYCKKGM 291
+V T N+++ R +++ E+ E L M+ GL+P TY ++ DG K M
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 663
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 111/242 (45%)
Query: 67 HSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRN 126
H+Y ++ L F +K+ M G + TY I S+ R + A+ +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 127 MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF 186
M GC + V YCT++ + G D+A +++ M L PD T++ +++ L K G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
+P + KL +++ +G +PNL TYNI + + A+ + G PD VTY+
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
V+ L + E+E +M PDE Y ++D + K G V+ A + + + G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 307 FK 308
+
Sbjct: 605 LR 606
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 17/270 (6%)
Query: 43 RFGKVQEAV--DVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
R+G E ++ R+D Y + N N L G+F Y + G D
Sbjct: 313 RWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNAL---GFF------YWLKRQPGFKHD 363
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+TYT + + R + A +LL M GC N V Y ++ + + A +F+
Sbjct: 364 GHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+M E PD T+ L+ K GF+ + + ++ G+SP+ FTY++ I L + G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK-MVNDGLQPDEFTY 279
L A + +G +P++VTYN ++ L K+R ++ L++ M N G +PD+ TY
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 280 NTIID--GYCKKGMVQDANRILKDAVFKGF 307
+ +++ G+C G +++A + + K +
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNW 570
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 84 QAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVV 143
QA++V +M D G + + R F G Y T+V
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGH---------------------TYTTMV 371
Query: 144 AGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVS 203
+L DEM+ P+ T+N+L+H + ++ E+ + N++ + G
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEEC 263
P+ TY I + G LD A+ + G+SPD TY+ +I L + + + +
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 264 LHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+MV+ G P+ TYN ++D + K Q+A ++ +D GF+
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 147/296 (49%), Gaps = 7/296 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
M+ LG ++F + LL EM R + N + Y + SYGR + EA++VF +M
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTV--TYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
C+P +Y +++I + G+ + A +Y RM+ G+ D +TY++ I + G A
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A +L M GC+ N V Y ++ + + A +L+ +M PD T++ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
L G++ E+E + ++ ++ P+ Y + + + G +++A + ++ G+ P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII----DGYCKKGM 291
+V T N+++ R +++ E+ E L M+ GL+P TY ++ DG K M
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 663
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 111/242 (45%)
Query: 67 HSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRN 126
H+Y ++ L F +K+ M G + TY I S+ R + A+ +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 127 MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF 186
M GC + V YCT++ + G D+A +++ M L PD T++ +++ L K G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
+P + KL +++ +G +PNL TYNI + + A+ + G PD VTY+
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
V+ L + E+E +M PDE Y ++D + K G V+ A + + + G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 307 FK 308
+
Sbjct: 605 LR 606
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 17/270 (6%)
Query: 43 RFGKVQEAV--DVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
R+G E ++ R+D Y + N N L G+F Y + G D
Sbjct: 313 RWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNAL---GFF------YWLKRQPGFKHD 363
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+TYT + + R + A +LL M GC N V Y ++ + + A +F+
Sbjct: 364 GHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+M E PD T+ L+ K GF+ + + ++ G+SP+ FTY++ I L + G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK-MVNDGLQPDEFTY 279
L A + +G +P++VTYN ++ L K+R ++ L++ M N G +PD+ TY
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 280 NTIID--GYCKKGMVQDANRILKDAVFKGF 307
+ +++ G+C G +++A + + K +
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNW 570
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 84 QAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVV 143
QA++V +M D G + + R F G Y T+V
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGH---------------------TYTTMV 371
Query: 144 AGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVS 203
+L DEM+ P+ T+N+L+H + ++ E+ + N++ + G
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEEC 263
P+ TY I + G LD A+ + G+SPD TY+ +I L + + + +
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 264 LHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+MV+ G P+ TYN ++D + K Q+A ++ +D GF+
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 131/276 (47%), Gaps = 9/276 (3%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFG------YFNQAHKVYMR 91
++SYG V + V +F+ + +P+ + IL+ + H+V
Sbjct: 92 LQSYGSIAVVNDTVKLFQH--ILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNL 149
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
M + G+ D T I ++S C TGR A L++ ++ + Y ++ + D
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 152 RDLARELFDEMLER-SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
+ E DEM + + PD+ +F L+ +C + E+ L++K+ G P+ F YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
++G C AV + EG+ PD +TYNT+I GL + RV E+ L MV+
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
G +PD TY ++++G C+KG A +L++ +G
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG 365
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 133/281 (47%), Gaps = 4/281 (1%)
Query: 27 NNLLEGAYVE---AMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFN 83
NN LE V A+RS G+V EA D+ + + + P ++YN ++ L + +
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 84 QAHKVYMRMKDK-GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTV 142
++ M+D V D+ ++TI I + C + A+ L+ + G + Y T+
Sbjct: 212 VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 143 VAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGV 202
+ GF A ++ +M E + PD T+N L+ GL K G V E+ L ++ G
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 203 SPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE 262
P+ TY + G+CR+G A+ L + G +P+ TYNT++ GLC+ + + E
Sbjct: 332 EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME 391
Query: 263 CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
M + G++ + Y T++ K G V +A + AV
Sbjct: 392 LYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAV 432
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 2/236 (0%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
V E VD E D ++ +P + S+ +++ + +A + ++ + G D + Y
Sbjct: 213 VYEFVD--EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNT 270
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
+K FC + A+ + + M G + + Y T++ G + G + AR M++
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
PD AT+ L++G+C+KG + LL ++ RG +PN TYN + GLC+ +D+ +
Sbjct: 331 YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGM 390
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
+ G+ + Y T++ L + +V E+ E V+ D Y+T+
Sbjct: 391 ELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 42/296 (14%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
S R ++E+V + D +C S+HS +IM L G + A + +M GV
Sbjct: 98 SLDRLASLRESVCQTKSFDYDDCL-SIHS--SIMRDLCLQGKLDAALWLRKKMIYSGVIP 154
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
+ T+ + C+ G A L+R M G S N V+Y T++ G + D A LF
Sbjct: 155 GLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLF 214
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFV-PESEKLLNKVL-------------------- 198
+ M + + P+ T N +VH LC+KG + ++KLL ++L
Sbjct: 215 NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDS 274
Query: 199 ------------------KRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
++ V + YN+ I+GLC G + A F+ + + G++PD
Sbjct: 275 CFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPD 334
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
V TYNT+I LC++ + E+ + M N G+ PD+ +Y II G C G V AN
Sbjct: 335 VFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 39/310 (12%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
MR GK+ A+ + ++M P + ++N ++N L + GY +A + M++ G
Sbjct: 128 MRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGP 187
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVA------------------- 138
+ +Y IK C AL L M+ +G N V
Sbjct: 188 SPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNK 247
Query: 139 -------------------YCTVVA-GFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
CT++ ++ G+ A E++ EM ++++ D +N ++
Sbjct: 248 KLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVII 307
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
GLC G + + + ++KRGV+P++FTYN I LC+EG D A G++ G++
Sbjct: 308 RGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVA 367
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
PD ++Y +I GLC V + E L M+ L P+ +N +IDGY + G A +
Sbjct: 368 PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Query: 299 LKDAVFKGFK 308
L + G K
Sbjct: 428 LNLMLSYGVK 437
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 122/262 (46%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
M S + G V +A++V++ M N YN I+ L G A+ M +GV
Sbjct: 272 MDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGV 331
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
DV+TY I + C+ G+ A L M G + + ++Y ++ G GD + A E
Sbjct: 332 NPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANE 391
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
ML+ SL P+V +N ++ G + G + +LN +L GV PN++T N I G
Sbjct: 392 FLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYV 451
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+ G L A + + PD TYN ++ C + + + +M+ G QPD
Sbjct: 452 KGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDII 511
Query: 278 TYNTIIDGYCKKGMVQDANRIL 299
TY ++ G C KG ++ A +L
Sbjct: 512 TYTELVRGLCWKGRLKKAESLL 533
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 133/267 (49%), Gaps = 4/267 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYF-NQAHKVYMR 91
+Y ++ V +A+ +F M+ Y P+ + N I++ L + G N K+
Sbjct: 193 SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEE 252
Query: 92 MKDKGVGS---DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYE 148
+ D + D+ TI + S + G AL + + MS ++V Y ++ G
Sbjct: 253 ILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 149 FGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFT 208
G+ A +M++R + PDV T+N L+ LCK+G E+ L + GV+P+ +
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQIS 372
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV 268
Y + IQGLC G ++RA FL S+ + + P+V+ +N VI G R + L+ M+
Sbjct: 373 YKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLML 432
Query: 269 NDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+ G++P+ +T N +I GY K G + DA
Sbjct: 433 SYGVKPNVYTNNALIHGYVKGGRLIDA 459
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P V +YN +++ L + G F++A ++ M++ GV D +Y + I+ C G + A
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
L +M + + V+ G+ +GD A + + ML + P+V T N L+HG K
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVK 452
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + ++ + N++ + P+ TYN+ + C G L A + R G PD++T
Sbjct: 453 GGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIIT 512
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
Y ++ GLC K R+ ++E L ++ G+ D + + Y +
Sbjct: 513 YTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTR 557
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 75/134 (55%)
Query: 171 VATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLG 230
++ + ++ LC +G + + L K++ GV P L T+N + GLC+ G +++A +
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180
Query: 231 SVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
+ G SP+ V+YNT+I GLC + V ++ + M G++P+ T N I+ C+KG
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 291 MVQDANRILKDAVF 304
++ + N+ L + +
Sbjct: 241 VIGNNNKKLLEEIL 254
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 35/163 (21%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
YGR+G A+ V M Y +P+V++ NA+++ V+ G A V M+ + D
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 474
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
TY + + + C G A +L M GC
Sbjct: 475 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ--------------------------- 507
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVS 203
PD+ T+ +LV GLC KG + ++E LL+++ G++
Sbjct: 508 --------PDIITYTELVRGLCWKGRLKKAESLLSRIQATGIT 542
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 137/269 (50%), Gaps = 3/269 (1%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ SY ++EA + M + +P V ++++I+N L + G + + M++ V
Sbjct: 234 LSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 290
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+ TYT + S + AL L M V G + V Y ++ G ++ GD A +
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
F +LE + P+V T+ LV GLCK G + +E ++ ++L++ V PN+ TY+ I G
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
++G L+ AV L + + + P+ TY TVI GL + + + E +M G++ + +
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 470
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKG 306
+ +++ + G +++ ++KD V KG
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 119/244 (48%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK++EA+ + +M L P++ +Y ++ + + K + + G+ Y
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I + C+ G A ++ +M G + V + +++ G++ A + M+E
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ P+VAT+N ++ GL G + E +K L+++ RG+ P+ FTYN I G + G +
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKG 801
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
++ + +G+ P TYN +I +++++ E L +M G+ P+ TY T+I
Sbjct: 802 SMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Query: 285 GYCK 288
G CK
Sbjct: 862 GLCK 865
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
M S + G + + ++++M +PS+ S N ++ +L E G +A + +M +
Sbjct: 580 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 639
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
++ TY I + + + R A + + +G + Y T++A + G A
Sbjct: 640 HPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAM 699
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ +M R PD TFN L+HG V ++ + +++ G+SPN+ TYN I+GL
Sbjct: 700 VMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
G + +L + GM PD TYN +I G + + S +M+ DGL P
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS 819
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKG 306
TYN +I + G + A +LK+ +G
Sbjct: 820 TYNVLISEFANVGKMLQARELLKEMGKRG 848
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 137/310 (44%), Gaps = 16/310 (5%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
++ L H ++ LSEM L + + ++ G F + + VD
Sbjct: 167 VISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVD------ 220
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFN--QAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGR 116
+ N I + ++ Y+N + Y M G DV T++ I C+ G+
Sbjct: 221 ------EISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGK 274
Query: 117 PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNK 176
LLR M N V Y T+V ++ A L+ +M+ R + D+ +
Sbjct: 275 VLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTV 334
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
L+ GL K G + E+EK +L+ PN+ TY + GLC+ G L A + + +
Sbjct: 335 LMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKS 394
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
+ P+VVTY+++I G +K + E+ L KM + + P+ FTY T+IDG K G + A
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 297 RILKDAVFKG 306
+ K+ G
Sbjct: 455 ELSKEMRLIG 464
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 120/246 (48%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GKV E + M+ + P+ +Y +++ L + + A +Y +M +G+ D+ Y
Sbjct: 273 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVY 332
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
T+ + + G A + + + N V Y +V G + GD A + +MLE
Sbjct: 333 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 392
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+S+ P+V T++ +++G KKG + E+ LL K+ + V PN FTY I GL + G +
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+ + G+ + + ++ L R R+ E + + MV+ G+ D+ Y ++ID
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 285 GYCKKG 290
+ K G
Sbjct: 513 VFFKGG 518
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 151/367 (41%), Gaps = 73/367 (19%)
Query: 14 MENLLSEMRATLENNLLEGAYVEAMRSYGRF--GKVQEAVDVFERMDLYNCEPSVHSYNA 71
+E +S +R + N++ + G F GK + A+++ + M L E + + +A
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 72 IMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFG 131
++N L G + + M KGV D YT I F + G AAL M G
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 132 CSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG----------- 180
++ V+Y +++G +FG A + M E+ + PD+ATFN +++
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 593
Query: 181 ------------------------LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF---- 212
LC+ G + E+ +LN+++ + PNL TY IF
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 653
Query: 213 -------------------------------IQGLCREGALDRAVVFLGSVSREGMSPDV 241
I LC+ G +A + +G + G PD
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDT 713
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
VT+N+++ G S V ++ M+ G+ P+ TYNTII G G++++ ++ L +
Sbjct: 714 VTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 302 AVFKGFK 308
+G +
Sbjct: 774 MKSRGMR 780
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 32/290 (11%)
Query: 45 GKVQEAVD-VFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT 103
G V + V ++ +M P V + N +++ + G + A + ++++ + D T
Sbjct: 107 GLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVT 163
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
Y I C G A + L M G + V+Y T++ GF + G+ A+ L DE+
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 223
Query: 164 ERSLC----------------------------PDVATFNKLVHGLCKKGFVPESEKLLN 195
E +L PDV TF+ +++ LCK G V E LL
Sbjct: 224 ELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR 283
Query: 196 KVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKS 255
++ + V PN TY + L + A+ + G+ D+V Y ++ GL +
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343
Query: 256 RVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
+ E+E+ ++ D P+ TY ++DG CK G + A I+ + K
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 393
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y M + G ++EA F+ + N P+V +Y A+++ L + G + A + +M
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+K V +V TY+ I + + G A+ LLR M N Y TV+ G ++ G +
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE 451
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
+A EL EM + + + LV+ L + G + E + L+ ++ +GV+ + Y I
Sbjct: 452 MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
+ G + A+ + + GM DVV+YN +I G+ + + V ++ M G++
Sbjct: 512 DVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKGMREKGIE 570
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILK 300
PD T+N +++ K+G D+ ILK
Sbjct: 571 PDIATFNIMMNSQRKQG---DSEGILK 594
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 149/334 (44%), Gaps = 39/334 (11%)
Query: 10 EFNQMENLLSEMRATLENNLLEG--AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVH 67
+ + E ++++M LE +++ Y + Y + G ++EAV + +M+ N P+
Sbjct: 379 DLSSAEFIITQM---LEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+Y +++ L + G A ++ M+ GV + Y + R GR L+++M
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 495
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK---- 183
G + + + Y +++ F++ GD + A +EM ER + DV ++N L+ G+ K
Sbjct: 496 VSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV 555
Query: 184 -----------KGFVP----------------ESE---KLLNKVLKRGVSPNLFTYNIFI 213
KG P +SE KL +K+ G+ P+L + NI +
Sbjct: 556 GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVV 615
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
LC G ++ A+ L + + P++ TY + + R + +++ G++
Sbjct: 616 GMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIK 675
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
YNT+I CK GM + A ++ D +GF
Sbjct: 676 LSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 155 ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL-NKVLKRGVSPNLFTYNIFI 213
A M + PD +N L+H G V + L+ +K++ GVSP++F N+ I
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
C+ G L A+ L +S D VTYNTVI GLC E+ + L +MV G+
Sbjct: 137 HSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 193
Query: 274 PDEFTYNTIIDGYCKKG 290
PD +YNT+IDG+CK G
Sbjct: 194 PDTVSYNTLIDGFCKVG 210
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 116 RPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG-DRDLARELFDEMLERSLCPDVATF 174
R + A R L M FG ++ + +++ F G D ++ +M+ + PDV
Sbjct: 73 RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFAL 132
Query: 175 NKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
N L+H CK G + + LL R +S + TYN I GLC G D A FL + +
Sbjct: 133 NVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVK 189
Query: 235 EGMSPDVVTYNTVICGLCRKSRVVES----------------------------EECLHK 266
G+ PD V+YNT+I G C+ V + EE
Sbjct: 190 MGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRD 249
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
MV G PD T+++II+ CK G V + +L++
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLRE 284
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 34/265 (12%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH-----KVYMRMKDKGV 97
+ G ++A V M+ P ++N++M+ GYF +H Y M + G+
Sbjct: 690 KLGMTKKAAMVMGDMEARGFIPDTVTFNSLMH-----GYFVGSHVRKALSTYSVMMEAGI 744
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+V TY I+ G + L M G + Y +++G + G+ +
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 804
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
++ EM+ L P +T+N L+ G + ++ +LL ++ KRGVSPN TY I GLC
Sbjct: 805 IYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQPDE 276
+ PD V +N + + E++ L +MV + G P
Sbjct: 865 KLCT----------------HPD-VEWNK------KAMYLAEAKGLLKEMVEEKGYIPCN 901
Query: 277 FTYNTIIDGYCKKGMVQDANRILKD 301
T I + K GM DA R LK+
Sbjct: 902 QTIYWISAAFSKPGMKVDAERFLKE 926
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
N+L+ G +V + V++A+ + M P+V +YN I+ L + G +
Sbjct: 717 NSLMHGYFVGS--------HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
K MK +G+ D +TY I + G ++ + M G Y +++ F
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESE 191
G AREL EM +R + P+ +T+ ++ GLCK P+ E
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVE 873
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 121/267 (45%), Gaps = 5/267 (1%)
Query: 45 GKVQEAVDVFER----MDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
G V+EA ER MD N PSV +N ++N QA K++ MK V
Sbjct: 226 GHVREASMYLERIGGTMD-SNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPT 284
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
V TY I+ +CR R A+ +L M + N + + ++ G E G A + +
Sbjct: 285 VVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMME 344
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
P + T+N LV CK G +P + K+L ++ RGV P TYN F + +
Sbjct: 345 RFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHN 404
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
+ + + G SPD +TY+ ++ LC ++ + + +M N G+ PD T
Sbjct: 405 KTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTT 464
Query: 281 TIIDGYCKKGMVQDANRILKDAVFKGF 307
+I C+ M+++A +AV +G
Sbjct: 465 MLIHLLCRLEMLEEAFEEFDNAVRRGI 491
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 160/317 (50%), Gaps = 22/317 (6%)
Query: 2 LQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYN 61
+++L ++F+ ++ +L + + ++ E + M YG G + A +F+ M N
Sbjct: 94 IRRLREAKKFSTIDEVL-QYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELN 152
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK-GVGSDVYTYTIRIKSFCRTGRPHAA 120
CE +V S+NA+++ V ++A K + + +K G+ D+ TY IK+ CR G
Sbjct: 153 CERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDI 212
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEF-----GDRDLARELFDEMLERSLCPDVATFN 175
L + + G + +++ T++ FY GDR ++D M ++L P++ ++N
Sbjct: 213 LSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDR-----IWDLMKSKNLSPNIRSYN 267
Query: 176 KLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE 235
V GL + ++ L++ + G+SP++ TYN I + L+ + + +
Sbjct: 268 SRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK 327
Query: 236 GMSPDVVTYNTVICGLCRK---SRVVE-SEECL-HKMVNDGLQPDEFTYNTIIDGYCKKG 290
G++PD VTY +I LC+K R VE SEE + HK+++ +P+ Y +++ G
Sbjct: 328 GLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLS---RPN--MYKPVVERLMGAG 382
Query: 291 MVQDANRILKDAVFKGF 307
+ +A +++K+ + +
Sbjct: 383 KIDEATQLVKNGKLQSY 399
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 9/260 (3%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFG------YFNQAHKVYMR 91
++SYG V + V +F+ + +P+ + IL+ + H+V
Sbjct: 92 LQSYGSIAVVNDTVKLFQH--ILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNL 149
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
M + G+ D T I ++S C TGR A L++ ++ + Y ++ + D
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 152 RDLARELFDEMLER-SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
+ E DEM + + PD+ +F L+ +C + E+ L++K+ G P+ F YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
++G C AV + EG+ PD +TYNT+I GL + RV E+ L MV+
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 271 GLQPDEFTYNTIIDGYCKKG 290
G +PD TY ++++G C+KG
Sbjct: 330 GYEPDTATYTSLMNGMCRKG 349
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 128/263 (48%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
++ + Y + G ++ +++VF+ M C P+VH++N ++N LVE +A ++ M
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
GV ++ +TYT ++ + G A + G + Y ++ + G
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A + EM R++ + +N L+ G ++G V E+ L+ ++ K GV P++ TY F
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I + G ++RA + + G+ P++ TY T+I G R S ++ C +M G+
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 273 QPDEFTYNTIIDGYCKKGMVQDA 295
+PD+ Y+ ++ + + +A
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEA 853
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 129/268 (48%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y M Y ++ + VF+R+ P+V +Y ++N+ + G ++A +V MK
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
++GV ++ TY++ I F + A + +M G + + Y +++ F G+ D
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A + EM + P TF ++HG K G + S ++ + + + G P + T+N I
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
GL + +++AV L ++ G+S + TY ++ G ++ E ++ N+GL
Sbjct: 632 NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLD 691
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKD 301
D FTY ++ CK G +Q A + K+
Sbjct: 692 VDIFTYEALLKACCKSGRMQSALAVTKE 719
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 35/303 (11%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + GK+ +A++V M + ++ +Y+ ++N V+ + A V+ M +G+ D
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
V Y I +FC G A++ ++ M + ++ G+ + GD + E+FD
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
M P V TFN L++GL +K + ++ ++L+++ GVS N TY +QG G
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 221 ALDRAVVFLGSVSREGMSPDVVTY-----------------------------------N 245
+A + + EG+ D+ TY N
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYN 733
Query: 246 TVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
+I G R+ V E+ + + +M +G++PD TY + I K G + A + +++
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 306 GFK 308
G K
Sbjct: 794 GVK 796
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 10/266 (3%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
YGR G + A + FERM P+ Y ++++ ++A +MK++G+
Sbjct: 319 YGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMS 378
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+ TY++ + F + G AA + NA Y ++ + + + A L
Sbjct: 379 LVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVR 438
Query: 161 EMLERSLCPDVATFNKLVHGLC-----KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
EM E + +A ++ ++ G KKG V + ++ + G +P + TY I
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV-----VFKRLKECGFTPTVVTYGCLINL 493
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
+ G + +A+ + EG+ ++ TY+ +I G + + MV +G++PD
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 276 EFTYNTIIDGYCKKGMVQDANRILKD 301
YN II +C G + A + +K+
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKE 579
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 38/261 (14%)
Query: 1 MLQKLGHHREFNQMENLLSEMR-ATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
++ L R+ + +L EM A + N E Y + M+ Y G +A
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSAN--EHTYTKIMQGYASVGDTGKA--------- 678
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
F YF R++++G+ D++TY +K+ C++GR +
Sbjct: 679 -------------------FEYFT-------RLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
AL + + MS N+ Y ++ G+ GD A +L +M + + PD+ T+ +
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
K G + + + + ++ GV PN+ TY I+G R ++A+ + G+ P
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP 832
Query: 240 DVVTYNTVICGLCRKSRVVES 260
D Y+ ++ L ++ + E+
Sbjct: 833 DKAVYHCLLTSLLSRASIAEA 853
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 116/261 (44%), Gaps = 4/261 (1%)
Query: 48 QEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIR 107
Q + FE++ +PS + ++ G ++A + + RM+ +G+ YT
Sbjct: 295 QAVISAFEKI----SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 350
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
I ++ AL +R M G + V Y +V GF + G + A FDE
Sbjct: 351 IHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHK 410
Query: 168 CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVV 227
+ + + K+++ C+ + +E L+ ++ + G+ + Y+ + G + +V
Sbjct: 411 TLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV 470
Query: 228 FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
+ G +P VVTY +I + ++ ++ E M +G++ + TY+ +I+G+
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 288 KKGMVQDANRILKDAVFKGFK 308
K +A + +D V +G K
Sbjct: 531 KLKDWANAFAVFEDMVKEGMK 551
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 150/343 (43%), Gaps = 39/343 (11%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M++ R++ M +L++ MR N+ + MR Y R KV EA+ F M+ Y
Sbjct: 140 MIESTAKIRQYKLMWDLINAMRKKKMLNV--ETFCIVMRKYARAQKVDEAIYAFNVMEKY 197
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK------------------------- 95
+ P++ ++N +++ L + +A +V+ M+D+
Sbjct: 198 DLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAR 257
Query: 96 ---------GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
G D+ TY+I + C+ GR AL ++R+M C Y +V +
Sbjct: 258 EVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTY 317
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
+ A + F EM + DVA FN L+ CK + ++L ++ +GV+PN
Sbjct: 318 GTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNS 377
Query: 207 FTYNIFIQGLCREGALDRAV-VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLH 265
+ NI ++ L G D A VF + + PD TY VI C K + +++
Sbjct: 378 KSCNIILRHLIERGEKDEAFDVFRKMI--KVCEPDADTYTMVIKMFCEKKEMETADKVWK 435
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
M G+ P T++ +I+G C++ Q A +L++ + G +
Sbjct: 436 YMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIR 478
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 117/229 (51%), Gaps = 8/229 (3%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+V EA+ + MD C+P+ Y+ +++ +A ++ M+ G+ +DV +
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I +FC+ R R+L+ M G + N+ + ++ E G++D A ++F +M++
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK 405
Query: 165 RSLC-PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
+C PD T+ ++ C+K + ++K+ + K+GV P++ T+++ I GLC E
Sbjct: 406 --VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQ 463
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+A V L + G+ P VT+ G R+ + E E + K +N+ +
Sbjct: 464 KACVLLEEMIEMGIRPSGVTF-----GRLRQLLIKEEREDVLKFLNEKM 507
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 122/244 (50%), Gaps = 2/244 (0%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
E SV +Y+ ++ + + + M+ K + +V T+ I ++ + R + A+
Sbjct: 131 EHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIY 189
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
M + N VA+ +++ + + A+E+F+ M +R PD T++ L+ G
Sbjct: 190 AFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWG 248
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K+ +P++ ++ +++ G P++ TY+I + LC+ G +D A+ + S+ P
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
Y+ ++ ++R+ E+ + +M G++ D +N++I +CK +++ R+LK+
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 303 VFKG 306
KG
Sbjct: 369 KSKG 372
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 117/233 (50%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
EP + + ++++N A V +M+ G+ DV TI I + C+ AL
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
+L+ M G S N V Y +++ G + G A EM + + P+V TF+ L+
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K+G + + + + +++ + PN+FTY+ I GLC +D A+ L + +G +P+VV
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
TY+T+ G + SRV + + L M G+ + + NT+I GY + G + A
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 126/256 (49%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ G++ +A MD P+V +++A+++ + G ++ VY M + +V+
Sbjct: 95 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 154
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
TY+ I C R A+++L M GC+ N V Y T+ GF++ D +L D+M
Sbjct: 155 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 214
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+R + + + N L+ G + G + + + + G+ PN+ +YNI + GL G +
Sbjct: 215 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 274
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
++A+ + + D++TY +I G+C+ V E+ + +K+ ++PD Y +
Sbjct: 275 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 334
Query: 283 IDGYCKKGMVQDANRI 298
I + GM +A+ +
Sbjct: 335 IAELNRAGMRTEADAL 350
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 127/249 (51%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
+++AV V +M+ + V +++ L + A +V RMKD+G+ +V TY+
Sbjct: 29 IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 88
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I C++GR A R L M + N + + ++ + + G ++ M++ S
Sbjct: 89 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 148
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
+ P+V T++ L++GLC V E+ K+L+ ++ +G +PN+ TY+ G + +D +
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 208
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
L + + G++ + V+ NT+I G + ++ + M ++GL P+ +YN ++ G
Sbjct: 209 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 268
Query: 287 CKKGMVQDA 295
G V+ A
Sbjct: 269 FANGEVEKA 277
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
V A++V +RM P+V +Y++++ L + G A + M K + +V T++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I ++ + G+ + + M N Y +++ G D A ++ D M+ +
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
P+V T++ L +G K V + KLL+ + +RGV+ N + N I+G + G +D A+
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
G ++ G+ P++ +YN V+ GL V ++ M D TY +I G
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Query: 287 CKKGMVQDANRILKDAVFK 305
CK MV++A + FK
Sbjct: 304 CKACMVKEAYDLFYKLKFK 322
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 111/217 (51%)
Query: 90 MRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF 149
++M G+ D+ T + + FC + A+ + M G + V ++ +
Sbjct: 2 LKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 150 GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTY 209
A E+ M +R + P+V T++ L+ GLCK G + ++E+ L+++ + ++PN+ T+
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
+ I + G L + + + + P+V TY+++I GLC +RV E+ + L M++
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
G P+ TY+T+ +G+ K V D ++L D +G
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG 218
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
+Y + GK+ + V++ M + +P+V +Y++++ L ++A K+ M KG
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
+V TY+ F ++ R ++LL +M G + N V+ T++ G+++ G DLA +F
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCRE 219
M L P++ ++N ++ GL G V ++ + K ++ TY I I G+C+
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 306
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESE 261
+ A + + + PD Y +I L R E++
Sbjct: 307 CMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEAD 348
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 150/347 (43%), Gaps = 41/347 (11%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLE-GAYVEAMRSYGRFGKVQEAVDVFERMD- 58
M+ LG R F+ M L++EM E+ L+ + MR + GK +AVD F M+
Sbjct: 172 MVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEK 231
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
Y + + N++M+ LV+ AH+V++++ D + D T+ I I FC+ +
Sbjct: 232 SYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFD 290
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A ++ M V + + V Y + V + + GD E+ +EM E P+V T+ ++
Sbjct: 291 DARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM 350
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
H L K V E+ + K+ + G P+ Y+ I L + G A ++ +G+
Sbjct: 351 HSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVR 410
Query: 239 PDVVTYNTVICGLCRKSR------------VVESEEC----------------------- 263
DV+ YNT+I SR E E C
Sbjct: 411 RDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLL 470
Query: 264 ---LHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
LH MV + + D TY +I G C G V++A ++AV KG
Sbjct: 471 GILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGM 517
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 122/249 (48%), Gaps = 8/249 (3%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRM----KDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
S H+YNA++++L + F+ ++ M + K V D + +R ++G+ + A
Sbjct: 165 SGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMR--RLAKSGKYNKA 222
Query: 121 LRLLRNMS-VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
+ M +G + +A +++ + + A E+F ++ + ++ PD TFN L+H
Sbjct: 223 VDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIH 281
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
G CK ++ +++ + +P++ TY F++ C+EG R L + G +P
Sbjct: 282 GFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP 341
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+VVTY V+ L + +V E+ KM DG PD Y+++I K G +DA I
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 300 KDAVFKGFK 308
+D +G +
Sbjct: 402 EDMTNQGVR 410
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 10/308 (3%)
Query: 4 KLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCE 63
KLG+ ++ ++LS+M +T N++ +Y M SYGR GK A +F RM E
Sbjct: 151 KLGNFNGAERVLSVLSKMGST--PNVI--SYTALMESYGRGGKCNNAEAIFRRMQSSGPE 206
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG---VGSDVYTYTIRIKSFCRTGRPHAA 120
PS +Y I+ VE F +A +V+ + D+ + D Y + I + + G A
Sbjct: 207 PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKA 266
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
++ +M G + V Y ++++ +E +++++ ++D+M + PDV ++ L+
Sbjct: 267 RKVFSSMVGKGVPQSTVTYNSLMS--FETSYKEVSK-IYDQMQRSDIQPDVVSYALLIKA 323
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
+ E+ + ++L GV P YNI + G +++A S+ R+ + PD
Sbjct: 324 YGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 383
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+ +Y T++ S + +E+ ++ DG +P+ TY T+I GY K V+ + +
Sbjct: 384 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 443
Query: 301 DAVFKGFK 308
G K
Sbjct: 444 KMRLSGIK 451
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 10/308 (3%)
Query: 4 KLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCE 63
KLG+ ++ ++LS+M +T N++ +Y M SYGR GK A +F RM E
Sbjct: 158 KLGNFNGAERVLSVLSKMGST--PNVI--SYTALMESYGRGGKCNNAEAIFRRMQSSGPE 213
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG---VGSDVYTYTIRIKSFCRTGRPHAA 120
PS +Y I+ VE F +A +V+ + D+ + D Y + I + + G A
Sbjct: 214 PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKA 273
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
++ +M G + V Y ++++ +E +++++ ++D+M + PDV ++ L+
Sbjct: 274 RKVFSSMVGKGVPQSTVTYNSLMS--FETSYKEVSK-IYDQMQRSDIQPDVVSYALLIKA 330
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
+ E+ + ++L GV P YNI + G +++A S+ R+ + PD
Sbjct: 331 YGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 390
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+ +Y T++ S + +E+ ++ DG +P+ TY T+I GY K V+ + +
Sbjct: 391 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 450
Query: 301 DAVFKGFK 308
G K
Sbjct: 451 KMRLSGIK 458
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E +V + SYG+ G VQE+V +F++M E ++ SYN++ +++ G + A + +
Sbjct: 185 EDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFN 244
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
+M +GV +TY + + F + R ALR +M G S + + T++ GF F
Sbjct: 245 KMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFK 304
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
D A +LF EM + P V ++ ++ G V + ++ ++ G+ PN TY+
Sbjct: 305 KMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYS 364
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSP-DVVTYNTVICGLCRKSRVVESEECLHKMVN 269
+ GLC G + A L ++ + ++P D + ++ + + + E L M
Sbjct: 365 TLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMAT 424
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
+ + Y +I+ CK A ++L + K
Sbjct: 425 LNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEK 460
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 51/300 (17%)
Query: 12 NQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVF---ERMDLYNCEPSVHS 68
N + +L+ E +L N+L GA K++ A+ F ER L + H
Sbjct: 106 NSIRDLVPEWDHSLVYNVLHGA-----------KKLEHALQFFRWTERSGLIRHDRDTHM 154
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
++ +L E N A + + M +KGV D + + I+S+ + G ++++ + M
Sbjct: 155 --KMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMK 212
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G +ER+ + ++N L + ++G
Sbjct: 213 DLG-------------------------------VERT----IKSYNSLFKVILRRGRYM 237
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
+++ NK++ GV P TYN+ + G L+ A+ F + G+SPD T+NT+I
Sbjct: 238 MAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMI 297
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
G CR ++ E+E+ +M + + P +Y T+I GY V D RI ++ G +
Sbjct: 298 NGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIE 357
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 10/276 (3%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y ++ Y +V + + +FE M EP+ +Y+ ++ L + G +A + M
Sbjct: 327 SYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Query: 93 KDKGVG-SDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
K + D + + S + G AA +L+ M+ A Y ++ +
Sbjct: 387 MAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASA 446
Query: 152 RDLARELFDEMLER--------SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVS 203
+ A +L D ++E+ +L + + +N ++ LC G ++E L +++KRGV
Sbjct: 447 YNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ 506
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEEC 263
+ N I+G +EG D + L +SR G+ + Y +I K +++
Sbjct: 507 -DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTA 565
Query: 264 LHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
L MV DG PD + ++I+ + G VQ A+R++
Sbjct: 566 LDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVM 601
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 143/308 (46%), Gaps = 22/308 (7%)
Query: 17 LLSEMRATLENNLLEGAYVEAMRSYGRF-GKVQEAVDVFE--RMDLYNCEPSVHSYNAIM 73
LL +R +++ + Y E R RF A+ F+ + DL P+V +Y ++
Sbjct: 62 LLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGK-RPNVGNYCLLL 120
Query: 74 NILVEFGYFNQAHKVY---MRMKDKGVGSDVY---------------TYTIRIKSFCRTG 115
+ILV F A + + + K DV+ + + +K + + G
Sbjct: 121 HILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLG 180
Query: 116 RPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFN 175
R+ R + G S + V ++ G + + +++ M + P+ TFN
Sbjct: 181 LVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFN 240
Query: 176 KLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE 235
L + C E + L K+ + G P+L TYN + CR G L A + R
Sbjct: 241 ILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRR 300
Query: 236 GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+ PD+VTY ++I GLC+ RV E+ + H+MV+ G++PD +YNT+I YCK+GM+Q +
Sbjct: 301 RVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQS 360
Query: 296 NRILKDAV 303
++L + +
Sbjct: 361 KKLLHEML 368
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 133/272 (48%), Gaps = 11/272 (4%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
+++ V+ M P+ +++N + N+ F + +M+++G D+ TY
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
+ S+CR GR A L + M + V Y +++ G + G A + F M++R
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
+ PD ++N L++ CK+G + +S+KLL+++L V P+ FT + ++G REG L AV
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV-NDGLQPDEFTYNTIIDG 285
F+ + R + + +I LC++ + ++ L +++ +G + TYN +I+
Sbjct: 397 NFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIES 456
Query: 286 YCK----------KGMVQDANRILKDAVFKGF 307
+ KG +++ N++L ++
Sbjct: 457 LSRCDAIEEALVLKGKLKNQNQVLDAKTYRAL 488
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 8/293 (2%)
Query: 11 FNQMENLLSEMRAT-LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSY 69
F ++++ L +M E +L+ Y + SY R G+++EA +++ M P + +Y
Sbjct: 252 FREVDDFLEKMEEEGFEPDLV--TYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTY 309
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
+++ L + G +AH+ + RM D+G+ D +Y I ++C+ G + +LL M
Sbjct: 310 TSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLG 369
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM--LERSLCPDVATFNKLVHGLCKKGFV 187
+ +V GF G A E+ L+ + +V F L+ LC++G
Sbjct: 370 NSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDF--LIVSLCQEGKP 427
Query: 188 PESEKLLNKVLKR-GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNT 246
++ LL+++++ G TYN I+ L R A++ A+V G + + D TY
Sbjct: 428 FAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRA 487
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+I LCR R E+E + +M + ++PD F ++ GYCK+ A R+L
Sbjct: 488 LIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLL 540
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 35/273 (12%)
Query: 23 ATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYF 82
AT E N + ++ Y + G V+E VF + SV + N ++N L++
Sbjct: 158 ATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLM 217
Query: 83 NQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTV 142
+VY M G+ + YT+ I FC
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCND---------------------------- 249
Query: 143 VAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGV 202
+ F E D ++M E PD+ T+N LV C++G + E+ L + +R V
Sbjct: 250 -SNFREVDD------FLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRV 302
Query: 203 SPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE 262
P+L TY I+GLC++G + A + G+ PD ++YNT+I C++ + +S++
Sbjct: 303 VPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKK 362
Query: 263 CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
LH+M+ + + PD FT I++G+ ++G + A
Sbjct: 363 LLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSA 395
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 116/291 (39%), Gaps = 43/291 (14%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ + G+V+EA F RM +P SYN ++ + G Q+ K+ M
Sbjct: 308 TYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEM 367
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAAL-------RLLRNMSVFGCSFNAVAYCT---- 141
V D +T + ++ F R GR +A+ RL ++ C F V+ C
Sbjct: 368 LGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKP 427
Query: 142 -----VVAGFYEFGDRDLARELFDEMLER-SLCP-------------------DVATFNK 176
++ E + E ++ ++E S C D T+
Sbjct: 428 FAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRA 487
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
L+ LC+ G E+E L+ ++ V P+ F + G C+E D+A L + E
Sbjct: 488 LIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEF 547
Query: 237 MSPDVVTYNTVICGLCRK----SRVVESEECLHKMVNDGLQPDEFTYNTII 283
D +YN+++ +C + +E +E + ++ G P+ T +I
Sbjct: 548 RIFDPESYNSLVKAVCETGCGYKKALELQERMQRL---GFVPNRLTCKYLI 595
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 134/308 (43%), Gaps = 32/308 (10%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E Y +R+ GR GK EAV +F M +V YN +M +L + ++A +V+
Sbjct: 270 EYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFS 329
Query: 91 RMKDKGVGSDVYTYTIR--------------------------------IKSFCRTGRPH 118
RM + G + YTY++ +++ + G
Sbjct: 330 RMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVS 389
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A RL +M F +Y +++ G A E+ ++ E+ + D +N +
Sbjct: 390 EAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVF 449
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
L K + L K+ K G SP++FTYNI I R G +D A+ + R
Sbjct: 450 SALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCK 509
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
PD+++YN++I L + V E+ +M GL PD TY+T+++ + K V+ A +
Sbjct: 510 PDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSL 569
Query: 299 LKDAVFKG 306
++ + KG
Sbjct: 570 FEEMLVKG 577
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 12/250 (4%)
Query: 2 LQKLGH----HREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERM 57
L KLGH HR F M + + +Y+ + S GK EA+++ ++
Sbjct: 382 LSKLGHVSEAHRLFCDMWSFPVKGE--------RDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
YN + + L + + H ++ +MK G D++TY I I SF R G
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
A+ + + C + ++Y +++ + GD D A F EM E+ L PDV T++ L
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ K V + L ++L +G PN+ TYNI + L + G AV + ++G+
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 238 SPDVVTYNTV 247
+PD +TY +
Sbjct: 614 TPDSITYTVL 623
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 32/295 (10%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILV--------------- 77
Y M+ + V +A+ VF RM C P+ ++Y+ ++N+LV
Sbjct: 307 GYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEIS 366
Query: 78 -----------------EFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+ G+ ++AH+++ M V + +Y ++S C G+ A
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+ +L + G + + Y TV + + +LF++M + PD+ T+N L+
Sbjct: 427 IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIAS 486
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
+ G V E+ + ++ + P++ +YN I L + G +D A V + +G++PD
Sbjct: 487 FGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPD 546
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
VVTY+T++ + RV + +M+ G QP+ TYN ++D K G +A
Sbjct: 547 VVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEA 601
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 124/255 (48%), Gaps = 2/255 (0%)
Query: 29 LLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV 88
+ +G Y +R+ + G V EA +F M + + SY +++ L G +A ++
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 89 YMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYE 148
++ +KGV +D Y + + + L M G S + Y ++A F
Sbjct: 430 LSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGR 489
Query: 149 FGDRDLARELFDEMLERSLC-PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
G+ D A +F+E LERS C PD+ ++N L++ L K G V E+ ++ ++G++P++
Sbjct: 490 VGEVDEAINIFEE-LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
TY+ ++ + ++ A + +G P++VTYN ++ L + R E+ + KM
Sbjct: 549 TYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
Query: 268 VNDGLQPDEFTYNTI 282
GL PD TY +
Sbjct: 609 KQQGLTPDSITYTVL 623
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 121/267 (45%), Gaps = 10/267 (3%)
Query: 42 GRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDV 101
G FG ++ + ++ + + +Y ++ + +++A VY ++ G D+
Sbjct: 179 GFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDI 238
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
+ Y + + + + + A ++ +M C + Y ++ G D A LF+E
Sbjct: 239 FAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNE 295
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
M+ L +V +N L+ L K V ++ ++ +++++ G PN +TY++ + L EG
Sbjct: 296 MITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Query: 222 LDR--AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTY 279
L R VV +S+ M+ + +Y ++ L + V E+ M + ++ + +Y
Sbjct: 356 LVRLDGVV---EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSY 410
Query: 280 NTIIDGYCKKGMVQDANRILKDAVFKG 306
++++ C G +A +L KG
Sbjct: 411 MSMLESLCGAGKTIEAIEMLSKIHEKG 437
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 9/227 (3%)
Query: 69 YNAIMNILVEFGY---FNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR 125
YN I+ IL F++ + M V ++ T I I F T LRL++
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVK 195
Query: 126 NMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKG 185
+ N+ Y ++ + D A +++ E+ D+ +N L+ L K
Sbjct: 196 K---WDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD- 251
Query: 186 FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYN 245
++ ++ + KR + +TY I I+ + R G D AV + EG++ +VV YN
Sbjct: 252 --EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYN 309
Query: 246 TVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
T++ L + V ++ + +MV G +P+E+TY+ +++ +G +
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL 356
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 8/291 (2%)
Query: 14 MENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIM 73
+E+LL E + TL EG V + YG+ G ++A+D F MDLY C+ SV S+NA +
Sbjct: 90 IEDLL-EHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAAL 148
Query: 74 NILVEFGYFNQAHKVYMRMKDK----GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
+L + H ++ + D G+ D ++ I IKSFC G A +R M
Sbjct: 149 QVL---SFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEK 205
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
G + + V Y T+++ Y+ + L++ M+ + P++ TFN + L + +
Sbjct: 206 SGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWD 265
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
+ LL + K V P+ TYN+ I+G D A ++ +G P++ Y T+I
Sbjct: 266 ANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIH 325
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
LC+ + + P+ T ++ G KKG + A I++
Sbjct: 326 YLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGC-----SFNA----VAYCTVVAGFYEFGDRDLAREL 158
I + + G AL NM ++GC SFNA +++ + +EF L
Sbjct: 113 IMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEF--------L 164
Query: 159 FDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCR 218
D + + D +FN + C+ G + + + ++ K G++P++ TY I L +
Sbjct: 165 HDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYK 224
Query: 219 EGALDRAVV---FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
+R V+ + +G P++ T+N I L + R ++ + L M ++PD
Sbjct: 225 H---ERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPD 281
Query: 276 EFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
TYN +I G+ A R+ KG+K
Sbjct: 282 SITYNMVIKGFFLARFPDMAERVYTAMHGKGYK 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 21/198 (10%)
Query: 26 ENNLLEGAYVEAMRSYGRFGKVQEAVD-------------------VFERMDLYNCEPSV 66
E +L+GAY+ AMR + G + V ++ M L C+P++
Sbjct: 189 ELGILDGAYM-AMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNL 247
Query: 67 HSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRN 126
++N + LV A+ + + M V D TY + IK F P A R+
Sbjct: 248 TTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTA 307
Query: 127 MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF 186
M G N Y T++ + G+ DLA + + + + P++ T L+ GL KKG
Sbjct: 308 MHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQ 367
Query: 187 VPESEKLLNKVLKRGVSP 204
+ +++ ++ V +R V P
Sbjct: 368 LDQAKSIMELVHRR-VPP 384
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 115/239 (48%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
+P+V ++ L + +A +V M G+ D YT + C+ G A++
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
L+ M G N V Y +V G G + + + + ++++ L P+ T++ L+
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K+ E+ KLL++++ +G PNL +YN+ + G C+EG D A+ + +G +VV
Sbjct: 223 KERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVV 282
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+YN ++ LC R E+ L +M P TYN +I+ G + A ++LK+
Sbjct: 283 SYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE 341
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 130/265 (49%), Gaps = 2/265 (0%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ ++++A+ V E M P +Y ++N L + G A ++ +M+D G S+
Sbjct: 118 KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTV 177
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
TY ++ C G + +L+ + + G + NA Y ++ Y+ D A +L DE+
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ + P++ ++N L+ G CK+G ++ L ++ +G N+ +YNI ++ LC +G
Sbjct: 238 IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW 297
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV--NDGLQPDEFTYN 280
+ A L + +P VVTYN +I L R ++ + L +M N + +YN
Sbjct: 298 EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYN 357
Query: 281 TIIDGYCKKGMVQDANRILKDAVFK 305
+I CK+G V + L + +++
Sbjct: 358 PVIARLCKEGKVDLVVKCLDEMIYR 382
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 133/271 (49%), Gaps = 2/271 (0%)
Query: 32 GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMR 91
AY + + G V A+ + E+M+ + + +YNA++ L G NQ+ + R
Sbjct: 142 SAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVER 201
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
+ KG+ + +TY+ +++ + A++LL + V G N V+Y ++ GF + G
Sbjct: 202 LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGR 261
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
D A LF E+ + +V ++N L+ LC G E+ LL ++ +P++ TYNI
Sbjct: 262 TDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNI 321
Query: 212 FIQGLCREGALDRAVVFLGSVSR--EGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
I L G ++A+ L +S+ +YN VI LC++ +V +CL +M+
Sbjct: 322 LINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY 381
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+P+E TYN I VQ+A I++
Sbjct: 382 RRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQ 412
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 134/314 (42%), Gaps = 40/314 (12%)
Query: 26 ENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQA 85
E NL+ +Y + + + G+ +A+ +F + + +V SYN ++ L G + +A
Sbjct: 243 EPNLV--SYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEA 300
Query: 86 HKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSF--NAVAYCTVV 143
+ + M V TY I I S GR AL++L+ MS F A +Y V+
Sbjct: 301 NSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVI 360
Query: 144 AGFYEFGDRDLARELFDEMLERSLCPDVATFNKL-------------------------- 177
A + G DL + DEM+ R P+ T+N +
Sbjct: 361 ARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKC 420
Query: 178 ---------VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
+ LC+KG + +LL ++ + G P+ TY+ I+GLC EG A+
Sbjct: 421 CTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEV 480
Query: 229 LGSVSR-EGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
L + E P V +N +I GLC+ R + E MV P+E TY +++G
Sbjct: 481 LSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIA 540
Query: 288 KKGMVQDANRILKD 301
+ ++ A +L +
Sbjct: 541 HEDELELAKEVLDE 554
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 75/138 (54%)
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
P+VA +L++ LCK + ++ +++ ++ G+ P+ Y + LC+ G + A+
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
+ + G + VTYN ++ GLC + +S + + +++ GL P+ FTY+ +++ K
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 289 KGMVQDANRILKDAVFKG 306
+ +A ++L + + KG
Sbjct: 224 ERGTDEAVKLLDEIIVKG 241
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 40/262 (15%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK--DKGVGSDVY 102
G+ +EA + MD + PSV +YN ++N L G QA +V M +
Sbjct: 295 GRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTAT 354
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGC-----SFNAVA------------------- 138
+Y I C+ G+ ++ L M C ++NA+
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 414
Query: 139 -----------YCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
Y +V+ G+ A +L EM PD T++ L+ GLC +G
Sbjct: 415 SNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 474
Query: 188 PESEKLLNKVLK-RGVSPNLFTYNIFIQGLCREGALDRAV-VFLGSVSREGMSPDVVTYN 245
+ ++L+ + + P + +N I GLC+ D A+ VF V ++ M P+ TY
Sbjct: 475 TGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM-PNETTYA 533
Query: 246 TVICGLCRKSRVVESEECLHKM 267
++ G+ + + ++E L ++
Sbjct: 534 ILVEGIAHEDELELAKEVLDEL 555
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 53/114 (46%)
Query: 194 LNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCR 253
L ++ G PN+ + LC+ L +A+ + + G+ PD Y ++ LC+
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 254 KSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+ V + + + KM + G + TYN ++ G C G + + + ++ + KG
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL 207
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 137/278 (49%), Gaps = 3/278 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ Y RF + EA V RM EP V +YN++++ + N+ +++ M
Sbjct: 50 TYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEM 109
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR-NMSVFGCSFNAVAYCTVVAGFYEFGD 151
G+ D+++Y + + + GR A ++L ++ + G Y ++ + G
Sbjct: 110 LHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGH 169
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
D A ELF + R + P++ T+N L++GLCK V + ++ ++ K G +PN TY
Sbjct: 170 TDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTT 228
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
++ + +++ + + +EG + D V+ L + R E+ EC+H++V G
Sbjct: 229 MLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Query: 272 LQP-DEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ D +YNT+++ Y K G + + +L++ KG K
Sbjct: 289 TRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLK 326
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 6/267 (2%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ G A+++F+ + +P + +YN ++N L + + +K G +
Sbjct: 166 KSGHTDNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAV 224
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
TYT +K + +T R L+L M G +F+ A C VV+ + G + A E E+
Sbjct: 225 TYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHEL 284
Query: 163 LER-SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
+ + D+ ++N L++ K G + + LL ++ +G+ P+ +T+ I + GL G
Sbjct: 285 VRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGN 344
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
A L + GM P VVT N +I GLC+ V + M DEFTY +
Sbjct: 345 TGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTS 400
Query: 282 IIDGYCKKGMVQDANRILKDAVFKGFK 308
++ CK G + A+++L KG K
Sbjct: 401 VVHNLCKDGRLVCASKLLLSCYNKGMK 427
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 131/268 (48%), Gaps = 3/268 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVF-ERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMR 91
+Y M Y + G+ EA + E + L P + +YN +++ L + G+ + A +++
Sbjct: 120 SYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH 179
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
+K + V ++ TY I I C++ R + ++R + G + NAV Y T++ +++
Sbjct: 180 LKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKR 238
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGV-SPNLFTYN 210
+ +LF +M + D +V L K G E+ + ++++++ G S ++ +YN
Sbjct: 239 IEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYN 298
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
+ ++G LD L + +G+ PD T+ ++ GL +E+ L +
Sbjct: 299 TLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEM 358
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRI 298
G+QP T N +IDG CK G V A R+
Sbjct: 359 GMQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
MK G+ + + I + S C+ A LL + G + + Y T++ G+ F
Sbjct: 6 MKFPGISTKLLN--ISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIG 63
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
D A + M E + PDV T+N L+ G K + +L +++L G+SP++++YN
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 212 FIQGLCREGALDRAVVFLG-SVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
+ + G A L + G+ P + TYN ++ LC+ + E L K +
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIE-LFKHLKS 182
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
++P+ TYN +I+G CK V + ++++ G+
Sbjct: 183 RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 105/248 (42%), Gaps = 6/248 (2%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ Y + ++++ + +F +M + A+++ L++ G +A++ +
Sbjct: 225 TYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHEL 284
Query: 93 KDKGVGS-DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
G S D+ +Y + + + G A LL + + G + + +V G G+
Sbjct: 285 VRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGN 344
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
A + + E + P V T N L+ GLCK G V + +L + R + FTY
Sbjct: 345 TGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTS 400
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
+ LC++G L A L S +GM V+ G+ R++ ++ H +
Sbjct: 401 VVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGI-RETVSYQAARKTHIKIKAA 459
Query: 272 LQPDEFTY 279
++ + Y
Sbjct: 460 IECNTLMY 467
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 142/303 (46%), Gaps = 5/303 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M++ L R+F + L+ EMR + +V ++ + V++A++V + M +
Sbjct: 153 MVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKF 212
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVY--MRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
EP + + +++ L + G A K++ MRM+ ++ +T + +CR G+
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR---FPVNLRYFTSLLYGWCRVGKMM 269
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A +L M+ G + V Y +++G+ G A +L +M R P+ + L+
Sbjct: 270 EAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLI 329
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
LCK + E+ K+ ++ + ++ TY + G C+ G +D+ + L + ++G+
Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 389
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
P +TY ++ +K E E + KM PD YN +I CK G V++A R+
Sbjct: 390 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Query: 299 LKD 301
+
Sbjct: 450 WNE 452
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+L L H L +MR NL + + + R GK+ EA V +M+
Sbjct: 224 LLDALCKHGSVKDAAKLFEDMRMRFPVNL--RYFTSLLYGWCRVGKMMEAKYVLVQMNEA 281
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
EP + Y +++ G A+ + M+ +G + YT+ I++ C+ R A
Sbjct: 282 GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEA 341
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+++ M + C + V Y +V+GF ++G D + D+M+++ L P T+ ++
Sbjct: 342 MKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA 401
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
KK E +L+ K+ + P++ YN+ I+ C+ G + AV + G+SP
Sbjct: 402 HEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPG 461
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
V T+ +I GL + ++E+ + +MV GL
Sbjct: 462 VDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 107/244 (43%), Gaps = 2/244 (0%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRM-KDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
S+ Y +++ IL + F + M K+ + + + ++ F A+ +
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
L M FG + + ++ + G A +LF++M R ++ F L++G C+
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCR 264
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + E++ +L ++ + G P++ Y + G G + A L + R G P+
Sbjct: 265 VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANC 324
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
Y +I LC+ R+ E+ + +M + D TY ++ G+CK G + +L D +
Sbjct: 325 YTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI 384
Query: 304 FKGF 307
KG
Sbjct: 385 KKGL 388
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 174 FNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVS 233
F LV V ++ ++L+++ K G P+ + + + LC+ G++ A +
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM- 244
Query: 234 REGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQ 293
R ++ + +++ G CR +++E++ L +M G +PD Y ++ GY G +
Sbjct: 245 RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 294 DANRILKDAVFKGFK 308
DA +L+D +GF+
Sbjct: 305 DAYDLLRDMRRRGFE 319
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 1/253 (0%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
AV VFE M+ + C+P + +YNA++++ G +A +++M ++ KG D TY +
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS-LC 168
+F R + + M G + + Y T++ + + G DLA +L+ +M S
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
PD T+ L+ L K E+ L++++L G+ P L TY+ I G + G + A
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
+ R G PD + Y+ ++ L R + ++ M++DG P Y +I G K
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 289 KGMVQDANRILKD 301
+ D + ++D
Sbjct: 556 ENRSDDIQKTIRD 568
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 127/265 (47%), Gaps = 3/265 (1%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYF--NQAHKVYMR 91
Y M Y R GK +A ++ + M C P + S+N ++N ++ G N A ++
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
+++ G+ D TY + + R A+++ +M C + Y +++ + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
A LF E+ + PD T+N L++ ++ + +++ ++ K G + TYN
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 212 FIQGLCREGALDRAVVFLGSVS-REGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I ++G LD A+ + G +PD +TY +I L + +R VE+ + +M++
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDA 295
G++P TY+ +I GY K G ++A
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEA 492
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 4/257 (1%)
Query: 48 QEAVDVFERMDLYNC-EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
Q A++VFE ++L + P+ AI+ +L + + A +++ R + VG V Y
Sbjct: 172 QRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTR-AEPTVGDRVQVYNA 230
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG--DRDLARELFDEMLE 164
+ + R+G+ A L+ M GC + +++ T++ + G +LA EL D +
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRN 290
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
L PD T+N L+ + + + K+ + P+L+TYN I R G
Sbjct: 291 SGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAE 350
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + +G PD VTYN+++ R+ + +E +M G DE TYNTII
Sbjct: 351 AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH 410
Query: 285 GYCKKGMVQDANRILKD 301
Y K+G + A ++ KD
Sbjct: 411 MYGKQGQLDLALQLYKD 427
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 7/270 (2%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
YGR G EA +F ++L P +YN+++ + +VY +M+ G G D
Sbjct: 342 YGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD 401
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMS-VFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
TY I + + G+ AL+L ++M + G + +A+ Y ++ + A L
Sbjct: 402 EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALM 461
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCRE 219
EML+ + P + T++ L+ G K G E+E + +L+ G P+ Y++ + L R
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRG 521
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQPDEFT 278
+A + +G +P Y +I GL +++R + ++ + M G+ P E +
Sbjct: 522 NETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEIS 581
Query: 279 YNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ ++ G C A R LK A+ G++
Sbjct: 582 -SVLVKGEC----FDLAARQLKVAITNGYE 606
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 120/275 (43%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y + + +YG+ Q+A V + P + ++N++M+ + G + +A ++ M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
G V + I + + C GR ++ + G + + ++ F G+
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
++++ M P + + ++ LCK V ++E +++++ + L +N +
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
+ + V + G+ PD TYNT+I CR R E + +M N GL
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
P TY ++I + K+ ++ A ++ ++ + KG K
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLK 1029
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 3/177 (1%)
Query: 133 SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEK 192
S NA ++ + LA E+F E ++ V +N ++ + G ++++
Sbjct: 188 SPNARMVAAILGVLGRWNQESLAVEIFTRA-EPTVGDRVQVYNAMMGVYSRSGKFSKAQE 246
Query: 193 LLNKVLKRGVSPNLFTYNIFIQGLCREGAL--DRAVVFLGSVSREGMSPDVVTYNTVICG 250
L++ + +RG P+L ++N I + G L + AV L V G+ PD +TYNT++
Sbjct: 247 LVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSA 306
Query: 251 LCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
R S + + + M QPD +TYN +I Y + G+ +A R+ + KGF
Sbjct: 307 CSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 107/238 (44%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+V++A + M+ N + + +N+++ + + + +VY R+K+ G+ D TY
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYN 966
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
I +CR RP L++ M G Y ++++ F + + A +LF+E+L +
Sbjct: 967 TLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSK 1026
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
L D + ++ ++ G ++EKLL + G+ P L T ++ + G A
Sbjct: 1027 GLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEA 1086
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
L ++ + + Y++VI R E L +M +GL+PD + +
Sbjct: 1087 EKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFV 1144
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 107/257 (41%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+++E V E + + S S +++ G + K+Y MK G + Y
Sbjct: 836 GRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLY 895
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I+ C+ R A ++ M + +++ + D +++ + E
Sbjct: 896 RMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE 955
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
L PD T+N L+ C+ E L+ ++ G+ P L TY I ++ L++
Sbjct: 956 TGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQ 1015
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + +G+ D Y+T++ ++E+ L M N G++P T + ++
Sbjct: 1016 AEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMV 1075
Query: 285 GYCKKGMVQDANRILKD 301
Y G Q+A ++L +
Sbjct: 1076 SYSSSGNPQEAEKVLSN 1092
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 105/261 (40%), Gaps = 9/261 (3%)
Query: 57 MDLYNCEPSVHS--------YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRI 108
+D Y +P VH Y +++ V ++ +A +V+ ++ G + +
Sbjct: 664 LDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMV 723
Query: 109 KSFCRTGRPHAALRLLRNMSVFGCSFN-AVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
+C+ G P A +++ G F + Y ++ + + A + + +
Sbjct: 724 VVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGR 783
Query: 168 CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVV 227
PD+ T+N L+ + G + + N +++ G SP + + NI + LC +G L+ V
Sbjct: 784 TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV 843
Query: 228 FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
+ + G + ++ R + E ++ M G P Y +I+ C
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 288 KKGMVQDANRILKDAVFKGFK 308
K V+DA ++ + FK
Sbjct: 904 KGKRVRDAEIMVSEMEEANFK 924
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 3/262 (1%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM---KDKG 96
S+ + K+ EA+ VF RM P+V S+N +++ + G A ++ +M
Sbjct: 227 SFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNF 286
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
V + TY I FC+ GR A R+ +M G N Y +V + G D A
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
L DEM + L + +N +V+ L +G + + +L + + + + FT I ++GL
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
CR G + AV F +S + + D+V +NT++ R ++ +++ L M+ GL D
Sbjct: 407 CRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDA 466
Query: 277 FTYNTIIDGYCKKGMVQDANRI 298
++ T+IDGY K+G ++ A I
Sbjct: 467 ISFGTLIDGYLKEGKLERALEI 488
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 128/260 (49%), Gaps = 3/260 (1%)
Query: 43 RFGKVQEAVDVFERMDLYN---CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
+ G ++ A+ + +M + + P+ +YN+++N + G + A ++ M GV
Sbjct: 265 KTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC 324
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
+ TY + ++ R G ALRL M+ G N V Y ++V + GD + A +
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCRE 219
+M +++ D T +V GLC+ G+V E+ + ++ ++ + ++ +N + R+
Sbjct: 385 RDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRD 444
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTY 279
L A LGS+ +G+S D +++ T+I G ++ ++ + E M+ + Y
Sbjct: 445 KKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIY 504
Query: 280 NTIIDGYCKKGMVQDANRIL 299
N+I++G K+GM A ++
Sbjct: 505 NSIVNGLSKRGMAGAAEAVV 524
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 125/246 (50%), Gaps = 6/246 (2%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G ++ A+ V M+ N + + ++ L GY +A + ++ +K + D+ +
Sbjct: 375 GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCH 434
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ F R + A ++L +M V G S +A+++ T++ G+ + G + A E++D M++
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ ++ +N +V+GL K+G +E ++N + + ++ TYN + + G ++
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEE 550
Query: 225 AVVFLGSVSREG--MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
A L + ++ S +VT+N +I LC+ +++E L MV G+ PD TY T+
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 283 IDGYCK 288
I + K
Sbjct: 611 ITSFSK 616
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 96 GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLA 155
G DV+ +R + + G A ++ G + A + + D
Sbjct: 145 GSSPDVFDSLVR--ACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 156 RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
+++ EM +V TFN +++ CK+ + E+ + ++LK GV PN+ ++N+ I G
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 216 LCREGALDRAVVFLGS---VSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
C+ G + A+ LG +S +SP+ VTYN+VI G C+ R+ +E MV G+
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+E TY ++D Y + G +A R+ + KG
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGL 357
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 3/179 (1%)
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
C + + ++V + GD A E+ ++ C V N + L +
Sbjct: 143 ACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICG 250
K+ ++ G N+ T+N+ I C+E L A+ + + G+ P+VV++N +I G
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 251 LCRKSRVVESEECLHK---MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
C+ + + + L K M + + P+ TYN++I+G+CK G + A RI D V G
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSG 321
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 29 LLEGAYVEAMR------SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYF 82
L++G ++A+ Y + GK++ A+++++ M N ++ YN+I+N L + G
Sbjct: 458 LVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMA 517
Query: 83 NQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGC--SFNAVAYC 140
A V M+ K D+ TY + +TG A +L M S + V +
Sbjct: 518 GAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFN 573
Query: 141 TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR 200
++ +FG + A+E+ M+ER + PD T+ L+ K + +L + ++ +
Sbjct: 574 IMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQ 633
Query: 201 GVSPNLFTYNIFIQGL 216
GV+P+ Y ++ L
Sbjct: 634 GVTPHEHIYLSIVRPL 649
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 148/345 (42%), Gaps = 50/345 (14%)
Query: 5 LGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
LG + EF L++ M E+ + + Y VQEA+D ++++D +N
Sbjct: 91 LGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRD 150
Query: 65 SVHSYN---------------------------------AIMNILV----EFGYFNQAHK 87
YN I N+++ + G++ + +
Sbjct: 151 ETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKE 210
Query: 88 VYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF- 146
+ +M +GV D+++Y+I + C++G+P A++L + M + VAY TV+
Sbjct: 211 YWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIG 270
Query: 147 ----YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGV 202
EFG R +F EM ER P+VAT N ++ LC+ G + ++ ++L+++ KRG
Sbjct: 271 ASQGVEFGIR-----VFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGC 325
Query: 203 SPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE 262
P+ TY L + + + G + R G+ P + TY ++ R +
Sbjct: 326 QPDSITYMCLFSRLEKPSEI---LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLY 382
Query: 263 CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
M G PD YN +ID +KGM+ A ++ + +G
Sbjct: 383 VWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 3/237 (1%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R + + G + + +++MD + SY+ M+I+ + G +A K+Y MK + +
Sbjct: 196 LRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRM 255
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
DV Y I++ + +R+ R M GC N + T++ E G A
Sbjct: 256 KLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYR 315
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ DEM +R PD T+ L L K E L ++++ GV P + TY + ++
Sbjct: 316 MLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTYVMLMRKFE 372
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQP 274
R G L + ++ G +PD YN VI L +K + + E +M+ GL P
Sbjct: 373 RWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 3/172 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY +R+ G V+ + VF M CEP+V ++N I+ +L E G A+++ M
Sbjct: 261 AYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEM 320
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+G D TY F R +P L L M G Y ++ F +G
Sbjct: 321 PKRGCQPDSITYMC---LFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFL 377
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP 204
++ M E PD A +N ++ L +KG + + + ++++RG+SP
Sbjct: 378 QPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 125/254 (49%), Gaps = 6/254 (2%)
Query: 2 LQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYN 61
+++L R F+ +E L+ E E Y +RSYG+ A+ FE+MD Y
Sbjct: 74 VRRLAKCRRFSDIETLI-ESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYG 132
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK--GVGSDVYTYTIRIKSFCRTGRPHA 119
S S+NA++N + F++ +++ + + + D +Y I IKS+C +G P
Sbjct: 133 TPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEK 192
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A+ ++R M G +A+ T+++ Y+ G+ ++A L++EM+++ D A +N +
Sbjct: 193 AIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIM 252
Query: 180 GLCKKGFVPESEK-LLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
K+ PE K L+ ++ G+ P+ +YN + C G LD A + +
Sbjct: 253 SAQKES--PERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCA 310
Query: 239 PDVVTYNTVICGLC 252
P+ T+ T+I LC
Sbjct: 311 PNAATFRTLIFHLC 324
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 99/230 (43%), Gaps = 2/230 (0%)
Query: 7 HHREFNQMENLLSEMRATLENNLLEG-AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPS 65
H + F+++ L E+ + + +Y ++SY G ++A+++ +M E +
Sbjct: 149 HSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVT 208
Query: 66 VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR 125
++ I++ L + G A ++ M KG D Y +RI S + P L+
Sbjct: 209 TIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIE 267
Query: 126 NMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKG 185
MS G + ++Y ++ + E G D A+++++ + + P+ ATF L+ LC
Sbjct: 268 EMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSR 327
Query: 186 FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE 235
+ + K + P+ T + GL D A + +V ++
Sbjct: 328 LYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 123/241 (51%), Gaps = 5/241 (2%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
+V S +MN+L+E G ++A V+ + + G + +YT + + + + ++
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
+ G +++ + V+ F E G+ + A + +M E L P +T+N L+ G
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 185 GFVPESEKLLNKVLKRG---VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
G S +LL+ +L+ G V PN+ T+N+ +Q C++ ++ A + + G+ PD
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 242 VTYNTVICGLCRKSRVVESE-ECLHKMV-NDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
VTYNT+ +K V +E E + KMV + +P+ T ++ GYC++G V+D R +
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFV 283
Query: 300 K 300
+
Sbjct: 284 R 284
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 34/293 (11%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH-----KVYMRM 92
++++ + KV+EA +V ++M+ P +YN I V+ G +A K+ M+
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K K G T I + +CR GR LR +R M N V + +++ GF E DR
Sbjct: 255 KAKPNGR---TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 153 DLAREL--------FDE-----------------MLERSLCPDVATFNKLVHGLCKKGFV 187
D E+ F+E M E ++ DV T++ +++ G++
Sbjct: 312 DGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYM 371
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
++ ++ +++K GV P+ Y+I +G R +A L ++ E P+VV + TV
Sbjct: 372 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTV 430
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
I G C + ++ +KM G+ P+ T+ T++ GY + A +L+
Sbjct: 431 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQ 483
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 12/269 (4%)
Query: 30 LEGAYVEAMRSYGRF-------GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYF 82
+EG+ +RS + G+ EA VF+ + PS+ SY ++ + +
Sbjct: 37 VEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQY 96
Query: 83 NQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTV 142
+ ++ G D + I +F +G A++ L M G + Y T+
Sbjct: 97 GSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTL 156
Query: 143 VAGFYEFGDRDLARELFDEMLER---SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
+ G+ G + + EL D MLE + P++ TFN LV CKK V E+ +++ K+ +
Sbjct: 157 IKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE 216
Query: 200 RGVSPNLFTYNIFIQGLCREGALDRA--VVFLGSVSREGMSPDVVTYNTVICGLCRKSRV 257
GV P+ TYN ++G RA V V +E P+ T V+ G CR+ RV
Sbjct: 217 CGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRV 276
Query: 258 VESEECLHKMVNDGLQPDEFTYNTIIDGY 286
+ + +M ++ + +N++I+G+
Sbjct: 277 RDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 4/195 (2%)
Query: 115 GRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATF 174
GRPH A + + ++ G + ++Y T++A + E+ + D F
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFF 118
Query: 175 NKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
N +++ + G + ++ + L K+ + G++P TYN I+G G +R+ L +
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 235 EG---MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG- 290
EG + P++ T+N ++ C+K +V E+ E + KM G++PD TYNTI Y +KG
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 291 MVQDANRILKDAVFK 305
V+ + +++ V K
Sbjct: 239 TVRAESEVVEKMVMK 253
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/336 (18%), Positives = 153/336 (45%), Gaps = 33/336 (9%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEA-MRSYGRFGKVQEAVDVFERMDL 59
+L + +++ + +++SE+ + L+ + A + ++ G +++AV +M
Sbjct: 86 LLAAMTVQKQYGSISSIVSEVEQS--GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKE 143
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG---VGSDVYTYTIRIKSFCRTGR 116
P+ +YN ++ G ++ ++ M ++G VG ++ T+ + ++++C+ +
Sbjct: 144 LGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKK 203
Query: 117 PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR-ELFDEM-LERSLCPDVATF 174
A +++ M G + V Y T+ + + G+ A E+ ++M ++ P+ T
Sbjct: 204 VEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTC 263
Query: 175 NKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC----REG---------- 220
+V G C++G V + + + ++ + V NL +N I G R+G
Sbjct: 264 GIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLL 323
Query: 221 -ALDRAVVFLG---------SVSRE-GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
+ + V +G ++ +E + DV+TY+TV+ + ++ + +MV
Sbjct: 324 MSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVK 383
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
G++PD Y+ + GY + + A +L+ + +
Sbjct: 384 AGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE 419
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 36/186 (19%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G + V V M N + V +Y+ +MN GY +A +V+ M GV D + Y
Sbjct: 334 GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 393
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+I K + R P A LL + + N V + TV++G+ G D A +F++M +
Sbjct: 394 SILAKGYVRAKEPKKAEELLETL-IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK 452
Query: 165 RSLCPDVATFNKLVHGLCK-----------------------------------KGFVPE 189
+ P++ TF L+ G + G E
Sbjct: 453 FGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDE 512
Query: 190 SEKLLN 195
S K +N
Sbjct: 513 SNKAIN 518
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%)
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+E S C V + KL++ L ++G E++ + + + G P+L +Y + + +
Sbjct: 37 VEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQY 96
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
+ V + G D + +N VI + ++ + L KM GL P TYNT+
Sbjct: 97 GSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTL 156
Query: 283 IDGYCKKGMVQDANRIL 299
I GY G + ++ +L
Sbjct: 157 IKGYGIAGKPERSSELL 173
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 8/265 (3%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQA----HKVYMRMKDKGVGSDVYTYT 105
A VF+ M+ C P SY +M G +A + ++ R+ KG G D+ Y
Sbjct: 171 ASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYR 230
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR--ELFDEML 163
I + + C G A+ +L + G Y + AG +E + R L E L
Sbjct: 231 ILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETL 290
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
R P + +++ + L ++G + E E++L + +G P F Y ++ LCR G L
Sbjct: 291 IRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK 350
Query: 224 RAVVFLGSVSREGMS-PDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQPDEFTYNT 281
AV + +G P V YN +I GLC + +E+ L KM +E TY T
Sbjct: 351 EAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQT 410
Query: 282 IIDGYCKKGMVQDANRILKDAVFKG 306
++DG C+ G +A++++++ + K
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKS 435
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 35/225 (15%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P + SY+A+ L E G + +V + M+ KG + Y ++K+ CR G+ A+ +
Sbjct: 296 PCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV 355
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
+ EM++ P V +N L+ GLC
Sbjct: 356 INK----------------------------------EMMQGHCLPTVGVYNVLIKGLCD 381
Query: 184 KGFVPESEKLLNKVLKR-GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
G E+ L K+ K+ N TY + GLCR+G A + + + P V
Sbjct: 382 DGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVE 441
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
TY+ +I GLC R E+ L +MV+ + P+ + + + C
Sbjct: 442 TYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 128/329 (38%), Gaps = 79/329 (24%)
Query: 55 ERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRT 114
ER Y SV Y +++IL + + V RMK+ + I++F R
Sbjct: 37 ERFPSYGHNGSV--YATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRA 94
Query: 115 GRPHAALRLLRNMSVFGC-----SFNAV-----------AYCTVVAGF---YEFGDR--- 152
GR A+ L +++ F C SF+ + A C + + +E R
Sbjct: 95 GRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITA 154
Query: 153 --------------DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL---- 194
DLA ++F EM + PD ++ L+ G C +G + E+ LL
Sbjct: 155 LNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMF 214
Query: 195 NKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS---------------- 238
++ ++G ++ Y I + LC G +D A+ LG + R+G+
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES 274
Query: 239 ---------------------PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
P + +Y+ + L + ++VE EE L M + G +P F
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPF 334
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKG 306
Y + C+ G +++A ++ + +G
Sbjct: 335 IYGAKVKALCRAGKLKEAVSVINKEMMQG 363
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 13/223 (5%)
Query: 7 HHREFNQMENL---LSEMRATLENNLLEGAYVEAMRSYGRF-------GKVQEAVDVFER 56
HH E E+ + ++ L L+ GA + + SY GK+ E +V
Sbjct: 265 HHIEAGHWESSSEGIERVKRLLTETLIRGA-IPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 57 MDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG-VGSDVYTYTIRIKSFCRTG 115
M EP+ Y A + L G +A V + +G V Y + IK C G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 116 RPHAALRLLRNMS-VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATF 174
+ A+ L+ MS C N Y T+V G G A ++ +EML +S P V T+
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 175 NKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ ++ GLC E+ L +++ + + P + + +C
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 8/265 (3%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQA----HKVYMRMKDKGVGSDVYTYT 105
A VF+ M+ C P SY +M G +A + ++ R+ KG G D+ Y
Sbjct: 171 ASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYR 230
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR--ELFDEML 163
I + + C G A+ +L + G Y + AG +E + R L E L
Sbjct: 231 ILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETL 290
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
R P + +++ + L ++G + E E++L + +G P F Y ++ LCR G L
Sbjct: 291 IRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK 350
Query: 224 RAVVFLGSVSREGMS-PDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQPDEFTYNT 281
AV + +G P V YN +I GLC + +E+ L KM +E TY T
Sbjct: 351 EAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQT 410
Query: 282 IIDGYCKKGMVQDANRILKDAVFKG 306
++DG C+ G +A++++++ + K
Sbjct: 411 LVDGLCRDGQFLEASQVMEEMLIKS 435
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 35/225 (15%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P + SY+A+ L E G + +V + M+ KG + Y ++K+ CR G+ A+ +
Sbjct: 296 PCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV 355
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
+ EM++ P V +N L+ GLC
Sbjct: 356 INK----------------------------------EMMQGHCLPTVGVYNVLIKGLCD 381
Query: 184 KGFVPESEKLLNKVLKR-GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
G E+ L K+ K+ N TY + GLCR+G A + + + P V
Sbjct: 382 DGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVE 441
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
TY+ +I GLC R E+ L +MV+ + P+ + + + C
Sbjct: 442 TYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 128/329 (38%), Gaps = 79/329 (24%)
Query: 55 ERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRT 114
ER Y SV Y +++IL + + V RMK+ + I++F R
Sbjct: 37 ERFPSYGHNGSV--YATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRA 94
Query: 115 GRPHAALRLLRNMSVFGC-----SFNAV-----------AYCTVVAGF---YEFGDR--- 152
GR A+ L +++ F C SF+ + A C + + +E R
Sbjct: 95 GRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITA 154
Query: 153 --------------DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL---- 194
DLA ++F EM + PD ++ L+ G C +G + E+ LL
Sbjct: 155 LNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMF 214
Query: 195 NKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS---------------- 238
++ ++G ++ Y I + LC G +D A+ LG + R+G+
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES 274
Query: 239 ---------------------PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
P + +Y+ + L + ++VE EE L M + G +P F
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPF 334
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKG 306
Y + C+ G +++A ++ + +G
Sbjct: 335 IYGAKVKALCRAGKLKEAVSVINKEMMQG 363
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 13/223 (5%)
Query: 7 HHREFNQMENL---LSEMRATLENNLLEGAYVEAMRSYGRF-------GKVQEAVDVFER 56
HH E E+ + ++ L L+ GA + + SY GK+ E +V
Sbjct: 265 HHIEAGHWESSSEGIERVKRLLTETLIRGA-IPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 57 MDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG-VGSDVYTYTIRIKSFCRTG 115
M EP+ Y A + L G +A V + +G V Y + IK C G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 116 RPHAALRLLRNMS-VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATF 174
+ A+ L+ MS C N Y T+V G G A ++ +EML +S P V T+
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 175 NKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ ++ GLC E+ L +++ + + P + + +C
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 123/241 (51%), Gaps = 5/241 (2%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
+V S +MN+L+E G ++A V+ + + G + +YT + + + + ++
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
+ G +++ + V+ F E G+ + A + +M E L P +T+N L+ G
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 185 GFVPESEKLLNKVLKRG---VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
G S +LL+ +L+ G V PN+ T+N+ +Q C++ ++ A + + G+ PD
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 242 VTYNTVICGLCRKSRVVESE-ECLHKMV-NDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
VTYNT+ +K V +E E + KMV + +P+ T ++ GYC++G V+D R +
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFV 283
Query: 300 K 300
+
Sbjct: 284 R 284
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 9/268 (3%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH-----KVYMRM 92
++++ + KV+EA +V ++M+ P +YN I V+ G +A K+ M+
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K K G T I + +CR GR LR +R M N V + +++ GF E DR
Sbjct: 255 KAKPNGR---TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D E+ M E ++ DV T++ +++ G++ ++ ++ +++K GV P+ Y+I
Sbjct: 312 DGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSIL 371
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+G R +A L ++ E P+VV + TVI G C + ++ +KM G+
Sbjct: 372 AKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGV 430
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILK 300
P+ T+ T++ GY + A +L+
Sbjct: 431 SPNIKTFETLMWGYLEVKQPWKAEEVLQ 458
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 135/326 (41%), Gaps = 47/326 (14%)
Query: 30 LEGAYVEAMRSYGRF-------GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYF 82
+EG+ +RS + G+ EA VF+ + PS+ SY ++ + +
Sbjct: 37 VEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQY 96
Query: 83 NQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTV 142
+ ++ G D + I +F +G A++ L M G + Y T+
Sbjct: 97 GSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTL 156
Query: 143 VAGFYEFGDRDLARELFDEMLERS---LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
+ G+ G + + EL D MLE + P++ TFN LV CKK V E+ +++ K+ +
Sbjct: 157 IKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE 216
Query: 200 RGVSPNLFTYNIFIQGLCREGALDRA--VVFLGSVSREGMSPDVVTYNTVICGLCRKSRV 257
GV P+ TYN ++G RA V V +E P+ T V+ G CR+ RV
Sbjct: 217 CGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRV 276
Query: 258 --------------VES---------------------EECLHKMVNDGLQPDEFTYNTI 282
VE+ +E L M ++ D TY+T+
Sbjct: 277 RDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTV 336
Query: 283 IDGYCKKGMVQDANRILKDAVFKGFK 308
++ + G ++ A ++ K+ V G K
Sbjct: 337 MNAWSSAGYMEKAAQVFKEMVKAGVK 362
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 36/259 (13%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y R G+V++ + RM E ++ +N+++N VE + +V MK+ V +D
Sbjct: 270 YCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKAD 329
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
V TY+ + ++ G A ++ + M G +A AY + G+ + A EL +
Sbjct: 330 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLE 389
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
++ S P+V F ++ G C G + ++ ++ NK+ K GVSPN
Sbjct: 390 TLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN--------------- 433
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
+ T+ T++ G + ++EE L M G++P+ T+
Sbjct: 434 --------------------IKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFL 473
Query: 281 TIIDGYCKKGMVQDANRIL 299
+ + + G+ ++N+ +
Sbjct: 474 LLAEAWRVAGLTDESNKAI 492
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 9/217 (4%)
Query: 9 REFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHS 68
R +M+ + E + N+L+ G +VE M G +V M N + V +
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLING-FVEVMDRDG-------IDEVLTLMKECNVKADVIT 332
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
Y+ +MN GY +A +V+ M GV D + Y+I K + R P A LL +
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL- 391
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
+ N V + TV++G+ G D A +F++M + + P++ TF L+ G +
Sbjct: 392 IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPW 451
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
++E++L + GV P T+ + + G D +
Sbjct: 452 KAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 488
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 124/257 (48%), Gaps = 2/257 (0%)
Query: 45 GKVQEAVDVFERMD-LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT 103
G Q ++ +F+ M C+P+ H Y ++++L G ++ +V+ M +GV V++
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG-DRDLARELFDEM 162
YT I ++ R GR +L LL M S + + Y TV+ G D + LF EM
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+ PD+ T+N L+ +G E+E + + G+ P+L TY+ ++ + L
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
++ LG ++ G PD+ +YN ++ + + E+ H+M G P+ TY+ +
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 283 IDGYCKKGMVQDANRIL 299
++ + + G D ++
Sbjct: 359 LNLFGQSGRYDDVRQLF 375
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + ++G+ ++++ D+ M P + SYN ++ + G +A V+ +M
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G + TY++ + F ++GR +L M +A Y ++ F E G
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
LF +M+E ++ PD+ T+ ++ K G ++ K+L + + P+ Y
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGV 463
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I+ + + A+V ++ G +P + T+++++ R V ESE L ++V+ G+
Sbjct: 464 IEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+ T+N I+ Y + G ++A + D
Sbjct: 524 PRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 141/343 (41%), Gaps = 50/343 (14%)
Query: 1 MLQKLGHHREFNQMENLLSEMRA-------TLENNLLEGAYVEAMRSYGRFGKVQEAVDV 53
+++ G R ++ +LL EM + T N LLE +Y + G ++EA+ V
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLE--------AYAKSGSIKEAMGV 339
Query: 54 FERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSF-- 111
F +M C P+ ++Y+ ++N+ + G ++ ++++ MK D TY I I+ F
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 112 --------------------------------CRTGRPHA-ALRLLRNMSVFGCSFNAVA 138
C G H A ++L+ M+ ++ A
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 139 YCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVL 198
Y V+ F + + A F+ M E P + TF+ L++ + G V ESE +L++++
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Query: 199 KRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVV 258
G+ N T+N I+ + G + AV + + PD T V+ V
Sbjct: 520 DSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVD 579
Query: 259 ESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
E E +M + P Y ++ Y K D N +L++
Sbjct: 580 ECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE 622
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 119/299 (39%), Gaps = 36/299 (12%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGY-FNQAHKVYMR 91
+Y + +YGR G+ + ++++ +RM PS+ +YN ++N G + ++
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
M+ +G+ D+ TY + + G A + R M+ G + Y +V F +
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN------ 205
+ +L EM PD+ ++N L+ K G + E+ + +++ G +PN
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 206 ----------------LF-------------TYNIFIQGLCREGALDRAVVFLGSVSREG 236
LF TYNI I+ G V + E
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+ PD+ TY +I + ++ + L M + + P Y +I+ + + + ++A
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 109/253 (43%), Gaps = 3/253 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY + ++G+ +EA+ F M PS+ ++++++ G ++ + R+
Sbjct: 459 AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRL 518
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
D G+ + T+ +I+++ + G+ A++ +M C + V++ Y F
Sbjct: 519 VDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLS-VYSFARL 577
Query: 153 -DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
D RE F+EM + P + + ++ K + +LL ++L VS
Sbjct: 578 VDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQ 637
Query: 212 FIQGLCREGALDRAVVF-LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I+G + + + V + L ++ EG + YN ++ L + + L++
Sbjct: 638 MIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKR 697
Query: 271 GLQPDEFTYNTII 283
GL P+ F N ++
Sbjct: 698 GLFPELFRKNKLV 710
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 16/276 (5%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y + + ++ R V++A + FE + P + +Y ++N QA+ ++ MK
Sbjct: 603 YGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMK 662
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+ V DV TY++ + S L + R M F + V Y ++ + D
Sbjct: 663 RRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLK 715
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR-GVSPNLFTYNIF 212
LF +M R + PDV T+ L+ + E+ L++ +K V P++F Y +
Sbjct: 716 KVYALFKDMKRREIVPDVVTYTVLLKN--------KPERNLSREMKAFDVKPDVFYYTVL 767
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I C+ G L A + G+ PD Y +I C+ + E++ +M+ G+
Sbjct: 768 IDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGV 827
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+PD Y +I G C+ G V A +++K+ + KG K
Sbjct: 828 KPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 29/288 (10%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
+ +AVDVF +M + ++I+ + G F++A+ ++ ++ + D Y +
Sbjct: 342 IPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNV 401
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
+ + G+ A+ L R M+ G + + + Y T++ G G A +L EM
Sbjct: 402 AFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
PD+ +N L GL G E+ + L + RGV P T+N+ I+GL G LD+A
Sbjct: 462 KTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAE 521
Query: 227 VFLGSVSREGMSPDV----------------------------VTYNTVICGLC-RKSRV 257
F S+ + D Y T+ LC K +
Sbjct: 522 AFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYI 581
Query: 258 VESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
++++ L +M G++P++ Y +I +C+ V+ A + V K
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 35/243 (14%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMN------------------ 74
Y + +Y R + ++A +FE M + +P V +Y+ ++N
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIP 696
Query: 75 -------ILVEFGYFNQAHKVYMRMKD---KGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
++ + + N KVY KD + + DV TYT+ +K+ +P L
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-----KPERNLS-- 749
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
R M F + Y ++ + GD A+ +FD+M+E + PD A + L+ CK
Sbjct: 750 REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
G++ E++ + +++++ GV P++ Y I G CR G + +AV + + +G+ P +
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASL 869
Query: 245 NTV 247
+ V
Sbjct: 870 SAV 872
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 15/304 (4%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENN-------LLEGAYVEAMRSYGRF--GKVQEAV 51
++Q L + + ++E LLS + + N +EG + M F +++A
Sbjct: 223 VVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDAN 282
Query: 52 DVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSF 111
+ ++ DL +Y ++ L A V + M+ G+ DVY Y+ I+
Sbjct: 283 ILVDKSDLG------IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGH 336
Query: 112 CRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDV 171
+ A+ + M N V +++ + + G+ A +LF E E ++ D
Sbjct: 337 RKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDR 396
Query: 172 ATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGS 231
+N L K G V E+ +L ++ +G++P++ Y I G C +G A +
Sbjct: 397 VCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIE 456
Query: 232 VSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGM 291
+ G +PD+V YN + GL E+ E L M N G++P T+N +I+G G
Sbjct: 457 MDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE 516
Query: 292 VQDA 295
+ A
Sbjct: 517 LDKA 520
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 127/299 (42%), Gaps = 25/299 (8%)
Query: 11 FNQMEN----LLSEMRAT---LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCE 63
NQM + LL +R ++ + L AY + +R ++++A V M+ + +
Sbjct: 264 LNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGID 323
Query: 64 PSVHSYNAI-------MNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGR 116
P V+ Y+AI MNI FN+ K R+ V S ++ +C+ G
Sbjct: 324 PDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSS-------ILQCYCQMGN 376
Query: 117 PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNK 176
A L + S + V Y + G + A ELF EM + + PDV +
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
L+ G C +G ++ L+ ++ G +P++ YN+ GL G A L + G
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRG 496
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+ P VT+N VI GL + ++E + + + D +++ G+C G + A
Sbjct: 497 VKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA----SMVKGFCAAGCLDHA 551
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 15/258 (5%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G QEA + + M+ +P+ ++N ++ L++ G ++A Y ++ K +D
Sbjct: 480 GLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASM- 538
Query: 105 TIRIKSFCRTG-RPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
+K FC G HA R +R S + ++ A E A++L D M
Sbjct: 539 ---VKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCA---EKDYISKAQDLLDRMW 592
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
+ + P+ + + KL+ C+ V ++ + ++ + + P+LFTY I I CR
Sbjct: 593 KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
+A + R + PDVVTY+ ++ E E + PD Y +I
Sbjct: 653 QAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAF-------DVIPDVVYYTIMI 705
Query: 284 DGYCKKGMVQDANRILKD 301
+ YC ++ + KD
Sbjct: 706 NRYCHLNDLKKVYALFKD 723
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 131/330 (39%), Gaps = 46/330 (13%)
Query: 9 REFNQMENL--LSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNC--EP 64
R F+ M+ L + EM +L LL +++Y EA+D+F R Y+ P
Sbjct: 124 RGFSVMDLLKAIGEMEQSLV--LLIRVSTALVKAYANLDMFDEAIDIFFRA-YYSLGRAP 180
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
+ + N +++ ++ G + + ++ G+ +D +TY + +++ R +LL
Sbjct: 181 DIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLL 240
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVA----TFNKLVHG 180
+ + V Y + G D+A L + + ++ D + + K+V G
Sbjct: 241 SRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRG 300
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG------------------------- 215
LC + + ++E ++ + K G+ P+++ Y+ I+G
Sbjct: 301 LCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRIN 360
Query: 216 ----------LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLH 265
C+ G A +S D V YN L + +V E+ E
Sbjct: 361 CVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFR 420
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+M G+ PD Y T+I G C +G DA
Sbjct: 421 EMTGKGIAPDVINYTTLIGGCCLQGKCSDA 450
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%)
Query: 57 MDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGR 116
M ++ +P V Y +++ + G +A +++ +M + GV D YT I C+ G
Sbjct: 752 MKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGY 811
Query: 117 PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNK 176
A + M G + V Y ++AG G A +L EMLE+ + P A+ +
Sbjct: 812 LKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSA 871
Query: 177 LVHGLCK 183
+ + K
Sbjct: 872 VHYAKLK 878
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 141/334 (42%), Gaps = 37/334 (11%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD-L 59
+ + L H+++ M +L +M+ L ++ + YG+ G V +AV++F +
Sbjct: 117 LAKSLASHKKYESMWKILKQMK-DLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKT 175
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
C+ +V YN++++ L + F+ A+ + RM KG+ D TY I + +C G+
Sbjct: 176 LGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKE 235
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A L MS G + A ++ G G + A+E+ +M + PD+ TFN L+
Sbjct: 236 AQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIE 295
Query: 180 ---------------------GLC--------------KKGFVPESEKLLNKVLKRGVSP 204
GLC K G + E+ +LLN ++ G P
Sbjct: 296 AISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKP 355
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL 264
Y I+G+CR G D A F + + P+ Y +I R + V++ L
Sbjct: 356 FPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYL 415
Query: 265 HKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
+M GL P ++ + DG G A RI
Sbjct: 416 VEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 1/246 (0%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P+ Y + L + K+ +MKD + T I+ + + G A+ L
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 124 LRNMS-VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
+ GC Y +++ + A L M+ + L PD T+ LV+G C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
G + E+++ L+++ +RG +P ++ I+GL G L+ A + +++ G PD+
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
T+N +I + + V E + GL D TY T+I K G + +A R+L +
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 303 VFKGFK 308
V G K
Sbjct: 349 VEDGHK 354
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 141/307 (45%), Gaps = 12/307 (3%)
Query: 2 LQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYN 61
+++L ++F +E +L E + N EG + YGR G + A VF+ M N
Sbjct: 78 VRRLAAAKKFEWVEEILEE-QNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERN 136
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK-GVGSDVYTYTIRIKSFCRTGRPHAA 120
C+ + S+NA++N V F+ ++ + K + DV +Y IK C G A
Sbjct: 137 CKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEA 196
Query: 121 LRLLRNMSVFG-----CSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFN 175
+ L+ + G +FN + + + G +E G++ AR M+E+++ D+ ++N
Sbjct: 197 VALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR-----MVEKNVKRDIRSYN 251
Query: 176 KLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE 235
+ GL + E L +K+ + P++FT+ I+G EG LD A+ + + +
Sbjct: 252 ARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN 311
Query: 236 GMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
G P +N+++ +C+ + + E ++ L DE ++D K +A
Sbjct: 312 GCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Query: 296 NRILKDA 302
I++ A
Sbjct: 372 EEIVELA 378
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV-VFLGSVSREGMSPDVVT 243
G ++K+ +++ +R ++N + D +F + + PDV +
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
YNT+I GLC K E+ + ++ N GL+PD T+N ++ KG ++ +I V
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 304 FKGFK 308
K K
Sbjct: 240 EKNVK 244
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 4/227 (1%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
+P ++++N +++ L + G + + RM+ + V D T+ + +CR P A++
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC---PDVATFNKLVH 179
LL M G YC + F + G D A +LFD M+ + P TF ++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
L K E +L+ +++ G P++ TY I+G+C +D A FL +S +G P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
D+VTYN + LC + E+ + +MV P TYN +I +
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMF 456
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 33/267 (12%)
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKV------YMRMKDKGVG-SDVYT--------- 103
Y+ EP +YN +++IL Y N+ ++ YM+ +K V DV
Sbjct: 155 YSHEPI--AYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCER 212
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
Y ++ F + R ++ ++ F +A+ C G + G+ L R +
Sbjct: 213 YLTHVQKFAK--RKRIRVKTQPEINAFNMLLDALCKC----GLVKEGEALLRR------M 260
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
+ PD TFN L G C+ ++ KLL ++++ G P FTY I C+ G +D
Sbjct: 261 RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVD 320
Query: 224 RAVVFLGSVSREGMS---PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
A + +G + P T+ +I L + + E E + +M++ G PD TY
Sbjct: 321 EAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYK 380
Query: 281 TIIDGYCKKGMVQDANRILKDAVFKGF 307
+I+G C V +A + L + KG+
Sbjct: 381 DVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
K +E ++ RM C P V +Y ++ + ++A+K M +KG D+ TY
Sbjct: 356 KAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYN 415
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
++ C + AL+L M C+ + Y +++ F+E D D A + EM +R
Sbjct: 416 CFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKR 475
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
DV T+ +++GL E+ LL +V+ +G+ ++ F+ L G L
Sbjct: 476 DCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNL 532
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 133/309 (43%), Gaps = 35/309 (11%)
Query: 30 LEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVY 89
+ GA V+A S G F EA DV + +C + + N +MN + EFG ++
Sbjct: 148 VSGALVKAYVSLGMF---DEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLF 204
Query: 90 MRMKDKGVGSDVYTYTIRIKSFCRTGR-PHAALRLLRNMSVFGCSFNAVAYCTV------ 142
++K G+ ++ YTY I +K+ CR G AA+ L+ N SVFG C
Sbjct: 205 KQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKA 264
Query: 143 VAGFYEFGDR------DL-------------------ARELFDEMLERSLCPDVATFNKL 177
VA E DR DL A + EM E DV +
Sbjct: 265 VALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAV 324
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ CK +PE+ L+K+L +G+ N ++ +Q C+ A+ +
Sbjct: 325 IDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNI 384
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
D V YN L + RV E+ E L +M + G+ PD Y T+IDGYC +G V DA
Sbjct: 385 FLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD 444
Query: 298 ILKDAVFKG 306
++ + + G
Sbjct: 445 LIDEMIGNG 453
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 17/242 (7%)
Query: 57 MDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGR 116
+D+Y C + Y MN+ G+ + +M KG+ + ++ ++ +C+
Sbjct: 316 LDVYACLAVIDRYCKNMNLPEALGFLD-------KMLGKGLKVNCVIVSLILQCYCKMDM 368
Query: 117 PHAAL---RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVAT 173
AL + R+M++F + V Y + G + A EL EM +R + PDV
Sbjct: 369 CLEALEKFKEFRDMNIF---LDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVIN 425
Query: 174 FNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVS 233
+ L+ G C +G V ++ L+++++ G+SP+L TYN+ + GL R G + + +
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
Query: 234 REGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQ 293
EG P+ VT + +I GLC +V E+E+ + Q + + GYC+ G+ +
Sbjct: 486 AEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE----QKCPENKASFVKGYCEAGLSK 541
Query: 294 DA 295
A
Sbjct: 542 KA 543
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 126/301 (41%), Gaps = 32/301 (10%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
++ Y + EA++ F+ N YN + L + G +A ++ MKD+G+
Sbjct: 360 LQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGI 419
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
DV YT I +C G+ AL L+ M G S + + Y +V+G G + E
Sbjct: 420 VPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE 479
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR---------------GV 202
+++ M P+ T + ++ GLC V E+E + + ++ G+
Sbjct: 480 IYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGL 539
Query: 203 SPNLFTYNIFIQ---------------GLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
S Y F++ LC EG L++A L +S + P +
Sbjct: 540 SKK--AYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKM 597
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
I C+ + V E++ MV GL PD FTY +I YC+ +Q A + +D +G
Sbjct: 598 IGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI 657
Query: 308 K 308
K
Sbjct: 658 K 658
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 20/263 (7%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
KV+EA D F ++ C + S+ + E G +A+K ++R++ S Y
Sbjct: 508 KVKEAEDFFSSLE-QKCPENKASF---VKGYCEAGLSKKAYKAFVRLEYPLRKS---VYI 560
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
S C G A +L+ MS + ++ F + + A+ LFD M+ER
Sbjct: 561 KLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER 620
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCR------- 218
L PD+ T+ ++H C+ + ++E L + +RG+ P++ TY + + +
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHE 680
Query: 219 ------EGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
E +A L S G+ DVV Y +I C+ + + ++ E +M++ GL
Sbjct: 681 TCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Query: 273 QPDEFTYNTIIDGYCKKGMVQDA 295
+PD Y T+I Y +KG + A
Sbjct: 741 EPDMVAYTTLISSYFRKGYIDMA 763
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 7/255 (2%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y + Y GKV +A+D+ + M P + +YN +++ L G+ + ++Y RMK
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+G + T ++ I+ C + A ++ C N ++ V G+ E G
Sbjct: 486 AEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQ-KCPENKASF---VKGYCEAG--- 538
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
L+++ + + + + KL LC +G++ ++ +L K+ V P I
Sbjct: 539 LSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMI 598
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
C+ + A V ++ G+ PD+ TY +I CR + + ++E M G++
Sbjct: 599 GAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIK 658
Query: 274 PDEFTYNTIIDGYCK 288
PD TY ++D Y K
Sbjct: 659 PDVVTYTVLLDRYLK 673
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 15/229 (6%)
Query: 25 LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQ 84
LE L + Y++ S G +++A DV ++M Y EP ++ + +
Sbjct: 550 LEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVRE 609
Query: 85 AHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA 144
A ++ M ++G+ D++TYTI I ++CR A L +M G + V Y ++
Sbjct: 610 AQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLD 669
Query: 145 GFY--------------EFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
+ E G R A E+ E + DV + L+ CK + ++
Sbjct: 670 RYLKLDPEHHETCSVQGEVGKRK-ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQA 728
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
+L ++++ G+ P++ Y I R+G +D AV + +S++ P
Sbjct: 729 AELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIP 777
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 116/239 (48%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G V E ++ ++ +P + Y +++ E G + +V M +Y Y
Sbjct: 227 GDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIY 286
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
IK C + A + +N+ G + + V Y T++ GF E G AR+L+ EM++
Sbjct: 287 QKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIK 346
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ + P+ +N ++HG K+G + E N++L+ G + + N I+G C G D
Sbjct: 347 KGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDE 406
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
A ++S G++P+ +TYN +I G C++++V + + ++ GL+P Y ++
Sbjct: 407 AFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 109/237 (45%)
Query: 72 IMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFG 131
++ L + G ++ +++ + +G+ Y Y I FC G +L M +
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 132 CSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESE 191
+ Y ++ G + A +F + ++ PD + ++ G C+KG++ +
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 192 KLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGL 251
KL +++K+G+ PN F YN+ I G + G + F + R G +++ NT+I G
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 252 CRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
C + E+ E M G+ P+ TYN +I G+CK+ V+ ++ K+ G K
Sbjct: 399 CSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLK 455
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 2/242 (0%)
Query: 21 MRATLENNLLEGAYVEA--MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVE 78
++ L+ L G YV A + + G +V M +N PS++ Y I+ L
Sbjct: 236 LKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCM 295
Query: 79 FGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVA 138
+A+ ++ +KDKG D YT I+ FC G +A +L M G N A
Sbjct: 296 NKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFA 355
Query: 139 YCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVL 198
Y ++ G ++ G+ L ++EML + + N ++ G C G E+ ++ +
Sbjct: 356 YNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMS 415
Query: 199 KRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVV 258
+ GV+PN TYN I+G C+E +++ + + G+ P + Y ++ L V
Sbjct: 416 ETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVA 475
Query: 259 ES 260
S
Sbjct: 476 TS 477
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 142/308 (46%), Gaps = 6/308 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+L LG + + + L +++ N++ Y + + R + EA ++ M +
Sbjct: 269 LLDSLGRAKLGKEAQVLFDKLKERFTPNMM--TYTVLLNGWCRVRNLIEAARIWNDMIDH 326
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+P + ++N ++ L+ + A K++ MK KG +V +YTI I+ FC+ A
Sbjct: 327 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 386
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+ +M G +A Y ++ GF D EL EM E+ PD T+N L+
Sbjct: 387 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 446
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG--LCREGALDRAVVFLGSVSREGMS 238
+ + ++ NK+++ + P++ T+N+ ++ + R + RAV + ++G+
Sbjct: 447 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV--WDEMIKKGIC 504
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
PD +Y +I GL + + E+ L +M++ G++ YN + + G + +
Sbjct: 505 PDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEEL 564
Query: 299 LKDAVFKG 306
+ A F G
Sbjct: 565 AQRAKFSG 572
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 131/286 (45%), Gaps = 3/286 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M+ L R+F M ++L EM + L + AM+++ + ++AV +FE M Y
Sbjct: 200 MMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKY 257
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+ V + N +++ L +A ++ ++K++ ++ TYT+ + +CR A
Sbjct: 258 KFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEA 316
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
R+ +M G + VA+ ++ G + A +LF M + CP+V ++ ++
Sbjct: 317 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 376
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
CK+ + + + + ++ G+ P+ Y I G + LD L + +G PD
Sbjct: 377 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 436
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
TYN +I + + +KM+ + ++P T+N I+ Y
Sbjct: 437 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 482
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 2/214 (0%)
Query: 95 KGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDL 154
+G D TY + +T + + +L M G + + F +R
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 246
Query: 155 ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQ 214
A +F+ M + V T N L+ L + E++ L +K LK +PN+ TY + +
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLN 305
Query: 215 GLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQP 274
G CR L A + G+ PD+V +N ++ GL R + ++ + H M + G P
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 365
Query: 275 DEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ +Y +I +CK+ ++ A D V G +
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 142/308 (46%), Gaps = 6/308 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+L LG + + + L +++ N++ Y + + R + EA ++ M +
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMM--TYTVLLNGWCRVRNLIEAARIWNDMIDH 327
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+P + ++N ++ L+ + A K++ MK KG +V +YTI I+ FC+ A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+ +M G +A Y ++ GF D EL EM E+ PD T+N L+
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG--LCREGALDRAVVFLGSVSREGMS 238
+ + ++ NK+++ + P++ T+N+ ++ + R + RAV + ++G+
Sbjct: 448 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV--WDEMIKKGIC 505
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
PD +Y +I GL + + E+ L +M++ G++ YN + + G + +
Sbjct: 506 PDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEEL 565
Query: 299 LKDAVFKG 306
+ A F G
Sbjct: 566 AQRAKFSG 573
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 131/286 (45%), Gaps = 3/286 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M+ L R+F M ++L EM + L + AM+++ + ++AV +FE M Y
Sbjct: 201 MMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKY 258
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+ V + N +++ L +A ++ ++K++ ++ TYT+ + +CR A
Sbjct: 259 KFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
R+ +M G + VA+ ++ G + A +LF M + CP+V ++ ++
Sbjct: 318 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
CK+ + + + + ++ G+ P+ Y I G + LD L + +G PD
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
TYN +I + + +KM+ + ++P T+N I+ Y
Sbjct: 438 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 483
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 141/301 (46%), Gaps = 23/301 (7%)
Query: 14 MENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVF-----ERMDLYNCEPSVHS 68
ME +L EM+ L ++L+ VE + RF ++ F ER + + +
Sbjct: 148 MEAVLDEMKLDLSHDLI----VEVLE---RFRHARKPAFRFFCWAAERQGFAH---ASRT 197
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN++M+IL + F V M KG+ + + T+TI +K+F A+ + M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARE---LFDEMLERSLCPDVATFNKLVHGLCKKG 185
+ + T+ G L +E LFD++ ER P++ T+ L++G C+
Sbjct: 257 KYKFK---IGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVR 312
Query: 186 FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYN 245
+ E+ ++ N ++ G+ P++ +N+ ++GL R A+ + +G P+V +Y
Sbjct: 313 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 246 TVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
+I C++S + + E MV+ GLQPD Y +I G+ + + +LK+ K
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 306 G 306
G
Sbjct: 433 G 433
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 128/278 (46%), Gaps = 1/278 (0%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
EG + YG+ G + A VFE M +C+ SV S+NA+++ F+ +++
Sbjct: 109 EGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFN 168
Query: 91 RMKDK-GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF 149
+ K + D+ +Y IK+ C A+ LL + G + V + T++ Y
Sbjct: 169 ELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK 228
Query: 150 GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTY 209
G +L E++ +M+E+++ D+ T+N + GL + E L ++ G+ P++F++
Sbjct: 229 GQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSF 288
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
N I+G EG +D A + + + G PD T+ ++ +C+ + E + +
Sbjct: 289 NAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFS 348
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+ T ++D K ++A I+K A F
Sbjct: 349 KRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDF 386
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 111/226 (49%), Gaps = 7/226 (3%)
Query: 84 QAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVV 143
+ K Y M +G + + I + + G A ++ M C + +++ ++
Sbjct: 98 EEQKKYRDMSKEGFAARI------ISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALL 151
Query: 144 AGFYEFGDRDLARELFDEMLER-SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGV 202
+ + D+ ELF+E+ + S+ PD+ ++N L+ LC+K +PE+ LL+++ +G+
Sbjct: 152 SAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGL 211
Query: 203 SPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE 262
P++ T+N + +G + + + ++ D+ TYN + GL +++ E
Sbjct: 212 KPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVN 271
Query: 263 CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
++ GL+PD F++N +I G +G + +A K+ V G++
Sbjct: 272 LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYR 317
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 142/308 (46%), Gaps = 6/308 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+L LG + + + L +++ N++ Y + + R + EA ++ M
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMM--TYTVLLNGWCRVRNLIEAARIWNDMIDQ 327
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+P + ++N ++ L+ + A K++ MK KG +V +YTI I+ FC+ A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+ +M G +A Y ++ GF D EL EM E+ PD T+N L+
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG--LCREGALDRAVVFLGSVSREGMS 238
+ + + ++ NK+++ + P++ T+N+ ++ + R + RAV + ++G+
Sbjct: 448 MANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAV--WEEMIKKGIC 505
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
PD +Y +I GL + + E+ L +M++ G++ YN + + G + +
Sbjct: 506 PDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEEL 565
Query: 299 LKDAVFKG 306
+ A F G
Sbjct: 566 AQRAKFSG 573
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 132/286 (46%), Gaps = 3/286 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M+ L R+F M ++L EM + L + AM+++ + ++AV +FE M Y
Sbjct: 201 MMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKY 258
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+ V + N +++ L +A ++ ++K++ ++ TYT+ + +CR A
Sbjct: 259 KFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
R+ +M G + VA+ ++ G + A +LF M + CP+V ++ ++
Sbjct: 318 ARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
CK+ + + + + ++ G+ P+ Y I G + LD L + +G PD
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
TYN +I + + + +KM+ + ++P T+N I+ Y
Sbjct: 438 GKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSY 483
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 2/214 (0%)
Query: 95 KGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDL 154
+G D TY + +T + + +L M G + + F +R
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 247
Query: 155 ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQ 214
A +F+ M + V T N L+ L + E++ L +K LK +PN+ TY + +
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLN 306
Query: 215 GLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQP 274
G CR L A + +G+ PD+V +N ++ GL R + ++ + H M + G P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 275 DEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ +Y +I +CK+ ++ A D V G +
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 6/290 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M+ LG R+F+ L+ EMR + + + +R Y V +A++ F +
Sbjct: 167 MISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRF 226
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRT-GRPHA 119
E + + ++++ L + + A + KDK D ++ I + +C G P
Sbjct: 227 KLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDK-YPFDAKSFNIVLNGWCNVIGSPRE 285
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A R+ M G + V+Y ++++ + + G + +LFD M + + PD +N +VH
Sbjct: 286 AERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVH 345
Query: 180 GLCKKGFVPESEKLLNKV-LKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
L K FV E+ L+ + ++G+ PN+ TYN I+ LC+ + A + +G+
Sbjct: 346 ALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLF 405
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
P + TY+ + L V E L KM G +P TY +I C+
Sbjct: 406 PTIRTYHAFMRILRTGEEVF---ELLAKMRKMGCEPTVETYIMLIRKLCR 452
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 4/264 (1%)
Query: 44 FGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT 103
G +EA V+ M + V SY+++++ + G N+ K++ RMK + + D
Sbjct: 280 IGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKV 339
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSV-FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
Y + + + A L++ M G N V Y +++ + + A+++FDEM
Sbjct: 340 YNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEM 399
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
LE+ L P + T++ + L + G E +LL K+ K G P + TY + I+ LCR
Sbjct: 400 LEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDF 456
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
D ++ + + + PD+ +Y +I GL ++ E+ +M + G++P+E + I
Sbjct: 457 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMI 516
Query: 283 IDGYCKKGMVQDANRILKDAVFKG 306
+ K + K V KG
Sbjct: 517 QSWFSGKQYAEQRITDSKGEVNKG 540
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 5/276 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
A+ + +Y + GK +EAV++ + M+ P + ++N ++ + G + A + +M
Sbjct: 249 AWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM 308
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G+ +DV+T+T I G + AL + R M + G NAV + V+
Sbjct: 309 ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVI 368
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ E+ ++ DV N LV K G + ++ K+ + V + V +T+N
Sbjct: 369 NQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV----YTWNSM 424
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG- 271
I G C+ G +A + + P+++T+NT+I G + E+ + +M DG
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK 484
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+Q + T+N II GY + G +A + + F F
Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 119/267 (44%), Gaps = 8/267 (2%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + G + +A VF+ M E ++ +++A++ + + K++ M GV D
Sbjct: 125 YAKCGCIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+ + ++ G A + + G S +++A + + G+ D A + F
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 240
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
M ER DV +N ++ C+ G E+ +L+ ++ K G+SP L T+NI I G + G
Sbjct: 241 RMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
D A+ + + G++ DV T+ +I GL ++ + KM G+ P+ T
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 281 TIIDGYCKKGMVQDANRILKDAVFKGF 307
+ + ++ + + AV GF
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGF 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 5/231 (2%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM-KDKGVGS 99
Y + G +A ++F RM N P++ ++N +++ ++ G +A ++ RM KD V
Sbjct: 428 YCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQR 487
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
+ T+ + I + + G+ AL L R M N+V +++ + RE+
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIH 547
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCRE 219
+L R+L A N L K G + S + + + ++ T+N I G
Sbjct: 548 GCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLH 603
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
G+ A+ + +G++P+ T +++I V E ++ + + ND
Sbjct: 604 GSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAND 654
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 8/189 (4%)
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS------LCPDVATFNKL 177
L+ M F F+ +Y + GF +GD D A LF EM ERS PD+ T+N L
Sbjct: 238 LKGMKRF--KFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSL 295
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+H LC G ++ + +++ G P+ TY I IQG C+ +D A+ G + G
Sbjct: 296 IHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGF 355
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
PD + YN ++ G + +V E+ + KMV +G++ +TYN +IDG + G +
Sbjct: 356 VPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFT 415
Query: 298 ILKDAVFKG 306
+ D KG
Sbjct: 416 LFCDLKKKG 424
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 128/270 (47%), Gaps = 6/270 (2%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVF----ERMDLYNCE--PSVHSYNAIMNILVEFGYFNQAH 86
+Y + +G +G + A+ +F ER +Y P + +YN+++++L FG A
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
V+ +K G D TY I I+ C++ R A+R+ M G + + Y ++ G
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGT 369
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
+ A +LF++M++ + T+N L+ GL + G L + K+G +
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 429
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
T++I LCREG L+ AV + + G S D+VT ++++ G ++ R E+ +
Sbjct: 430 ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKH 489
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
+ L P+ +N ++ K+ +D +
Sbjct: 490 IREGNLVPNVLRWNAGVEASLKRPQSKDKD 519
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 124/280 (44%), Gaps = 13/280 (4%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
N LL G MRS F +V E + +R SYN ++ +G + A
Sbjct: 216 NELLVGLRRADMRS--EFKRVFEKLKGMKRFKF-----DTWSYNICIHGFGCWGDLDAAL 268
Query: 87 KVYMRMKDKG------VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYC 140
++ MK++ G D+ TY I C G+ AL + + V G + Y
Sbjct: 269 SLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYR 328
Query: 141 TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR 200
++ G + D A ++ EM PD +N L+ G K V E+ +L K+++
Sbjct: 329 ILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQE 388
Query: 201 GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
GV + +TYNI I GL R G + + ++G D +T++ V LCR+ ++ +
Sbjct: 389 GVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGA 448
Query: 261 EECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+ + +M G D T ++++ G+ K+G +++K
Sbjct: 449 VKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMK 488
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 94/170 (55%), Gaps = 3/170 (1%)
Query: 133 SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVA--TFNKLVHGLCKKGFVPES 190
SF+ T ++ + GD LA +LF E+ D+ T+N ++ KKG+ +
Sbjct: 591 SFDVDMMNTFLSIYLSKGDLSLACKLF-EIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTA 649
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICG 250
+L+++ + + ++ TYN+ IQGL + G D A L ++++G D+V YNT+I
Sbjct: 650 RGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINA 709
Query: 251 LCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
L + +R+ E+ + M ++G+ PD +YNT+I+ K G +++A + LK
Sbjct: 710 LGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLK 759
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 32/291 (10%)
Query: 48 QEAVDVFERMDL----YNCEP----SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
+ ++D +++D Y+ P S +Y+ I + G + + MK+ GV
Sbjct: 66 RNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNL 125
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
D I + S R+G+ +AL +L M G N Y +V+ + + LA +
Sbjct: 126 DQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSIL 185
Query: 160 DEMLER---------------SLCPDVATFNKLVHGLCKKGFVPESEKLLNKV--LKRGV 202
++LE S P N+L+ GL + E +++ K+ +KR
Sbjct: 186 FKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKR-F 244
Query: 203 SPNLFTYNIFIQGLCREGALDRAVVFL------GSVSREGMSPDVVTYNTVICGLCRKSR 256
+ ++YNI I G G LD A+ SV PD+ TYN++I LC +
Sbjct: 245 KFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGK 304
Query: 257 VVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
++ ++ G +PD TY +I G CK + DA RI + + GF
Sbjct: 305 AKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGF 355
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 134 FNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKL 193
+ Y ++++ F + G AR + D+M E D+AT+N ++ GL K G + +
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 194 LNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCR 253
L+++ K+G ++ YN I L + LD A + G++PDVV+YNT+I +
Sbjct: 688 LDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
Query: 254 KSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
++ E+ + L M++ G P+ T +TI+D
Sbjct: 748 AGKLKEAYKYLKAMLDAGCLPNHVT-DTILD 777
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%)
Query: 67 HSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRN 126
++YN++M+ V+ GYF A V +M + +D+ TY + I+ + GR A +L
Sbjct: 631 YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 127 MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF 186
++ G + V Y T++ + D A +LFD M + PDV ++N ++ K G
Sbjct: 691 LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIF 212
+ E+ K L +L G PN T I
Sbjct: 751 LKEAYKYLKAMLDAGCLPNHVTDTIL 776
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 9/154 (5%)
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
ELF EM +R L + T+ L+ GL + G ++++ +++ GV P++ TYNI + GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 217 CREGALDRAVV---------FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
C+ G L++A+V S+S +G+ P+VVTY T+I G C+K E+ KM
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
DG PD TYNT+I + + G + ++K+
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+ L R MS G N V Y T++ G ++ GD D+A+E+F EM+ + PD+ T+N L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 181 LCKK---------GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGS 231
LCK G V + L + +GV PN+ TY I G C++G + A
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 232 VSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+ +G PD TYNT+I R S E + +M + D TY + D
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 10/186 (5%)
Query: 51 VDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKS 110
+++F M + +Y ++ L + G + A +++ M GV D+ TY I +
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 111 FCRTGRPHAAL---------RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
C+ G+ AL L ++S+ G N V Y T+++GF + G ++ A LF +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
M E PD T+N L+ + G S +L+ ++ + + TY + + + +G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL-VTDMLHDGR 179
Query: 222 LDRAVV 227
LD+ +
Sbjct: 180 LDKGFL 185
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQA------- 85
Y ++ + G A ++F+ M P + +YN +++ L + G +A
Sbjct: 18 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVE 77
Query: 86 --HKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVV 143
++ + KGV +V TYT I FC+ G A L R M G ++ Y T++
Sbjct: 78 DGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
Query: 144 AGFYEFGDRDLARELFDEMLERSLCPDVATF----NKLVHGLCKKGFV 187
GD+ + EL EM D +T+ + L G KGF+
Sbjct: 138 RAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFL 185
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 142/303 (46%), Gaps = 5/303 (1%)
Query: 5 LGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
LG +++++M+ + MR L + MR + G+ +EAV +F+R+ + E
Sbjct: 131 LGKAKKWDRMKEFVERMRGDKLVTL--NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEK 188
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
+ S N +++ L + QA V +++K + + +T+ I I +C+ R AL +
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
+ M G ++Y T++ + + + E+ EM P+ T+ ++ L +
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV-VFLGSVSREGMSPDVVT 243
E+ ++ ++ + G P+ YN I L R G L+ A VF + G+S + T
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGL-QPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
YN++I C ++ E L +M + L PD TY ++ K+G V + ++LK+
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Query: 303 VFK 305
V K
Sbjct: 428 VTK 430
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y +R Y + + + ++ M+ P+ +Y IM+ L F +A +V RM
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR-NMSVFGCSFNAVAYCTVVAGFYEFGD 151
K G D Y I + R GR A R+ R M G S N Y +++A + +
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 152 RDLARELFDEMLERSLC-PDVATFNKLVHGLCKKGFVPESEKLLNK-VLKRGVSPNLFTY 209
D A EL EM +LC PDV T+ L+ K+G V E KLL + V K +S + TY
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSP 239
IQ LCR + A + + ++P
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMK-DKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
S +Y+ ++IL + +++ + RM+ DK V + +R F G A+ +
Sbjct: 120 SSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMR--RFAGAGEWEEAVGI 177
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
+ FG N + ++ + + AR + + L+ + P+ TFN +HG CK
Sbjct: 178 FDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCK 236
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
V E+ + ++ G P + +Y I+ C++ + L + G P+ +T
Sbjct: 237 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSIT 296
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
Y T++ L + E+ +M G +PD YN +I + G +++A R+ +
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 142/303 (46%), Gaps = 5/303 (1%)
Query: 5 LGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
LG +++++M+ + MR L + MR + G+ +EAV +F+R+ + E
Sbjct: 131 LGKAKKWDRMKEFVERMRGDKLVTL--NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEK 188
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
+ S N +++ L + QA V +++K + + +T+ I I +C+ R AL +
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
+ M G ++Y T++ + + + E+ EM P+ T+ ++ L +
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQ 307
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV-VFLGSVSREGMSPDVVT 243
E+ ++ ++ + G P+ YN I L R G L+ A VF + G+S + T
Sbjct: 308 KEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTST 367
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGL-QPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
YN++I C ++ E L +M + L PD TY ++ K+G V + ++LK+
Sbjct: 368 YNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Query: 303 VFK 305
V K
Sbjct: 428 VTK 430
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y +R Y + + + ++ M+ P+ +Y IM+ L F +A +V RM
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR-NMSVFGCSFNAVAYCTVVAGFYEFGD 151
K G D Y I + R GR A R+ R M G S N Y +++A + +
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 152 RDLARELFDEMLERSLC-PDVATFNKLVHGLCKKGFVPESEKLLNK-VLKRGVSPNLFTY 209
D A EL EM +LC PDV T+ L+ K+G V E KLL + V K +S + TY
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSP 239
IQ LCR + A + + ++P
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 104/237 (43%), Gaps = 4/237 (1%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMK-DKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
S +Y+ ++IL + +++ + RM+ DK V + +R F G A+ +
Sbjct: 120 SSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMR--RFAGAGEWEEAVGI 177
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
+ FG N + ++ + + AR + + L+ + P+ TFN +HG CK
Sbjct: 178 FDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCK 236
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
V E+ + ++ G P + +Y I+ C++ + L + G P+ +T
Sbjct: 237 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSIT 296
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
Y T++ L + E+ +M G +PD YN +I + G +++A R+ +
Sbjct: 297 YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 126/276 (45%), Gaps = 2/276 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY+E + R G +EA+DVF+RM C+P+ +YN ++N+ + + K+Y M
Sbjct: 255 AYIEGLMK--RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 312
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ ++ TYT + +F R G A + + G + Y ++ + G
Sbjct: 313 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 372
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A E+F M PD A++N +V + G ++E + ++ + G++P + ++ +
Sbjct: 373 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 432
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ + + + + +S G+ PD N+++ R + + E+ L +M N
Sbjct: 433 LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPC 492
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
D TYN +I+ Y K G ++ + + K F+
Sbjct: 493 TADISTYNILINIYGKAGFLERIEELFVELKEKNFR 528
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + ++ R G ++A ++FE++ EP V+ YNA+M GY A +++ M
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G D +Y I + ++ R G A + M G + ++ +++ + + D
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ EM E + PD N +++ + G + EK+L ++ + ++ TYNI
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 502
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I + G L+R + + PDVVT+ + I RK V+ E +M++ G
Sbjct: 503 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 562
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILK 300
PD T ++ + V+ +L+
Sbjct: 563 APDGGTAKVLLSACSSEEQVEQVTSVLR 590
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 8/245 (3%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTG---RPHA 119
+P V +N +++ + + +A +Y+++ + TY + IK++C G R
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEF-GDRDLARELFDEMLERSLCPDVATFNKLV 178
L ++N V + Y + G + G+ + A ++F M P T+N ++
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 179 --HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
+G K ++ S KL ++ PN+ TY + REG ++A + +G
Sbjct: 294 NLYGKASKSYM--SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 351
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
+ PDV YN ++ R + E M + G +PD +YN ++D Y + G+ DA
Sbjct: 352 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
Query: 297 RILKD 301
+ ++
Sbjct: 412 AVFEE 416
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
S PDV FN L+ +K E+E L ++L+ P TY + I+ C G ++RA
Sbjct: 172 SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA 231
Query: 226 VVFLGSVSREGMSPD---VVTYNTVICGLC-RKSRVVESEECLHKMVNDGLQPDEFTYNT 281
V L + +SP V YN I GL RK E+ + +M D +P TYN
Sbjct: 232 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNL 291
Query: 282 IIDGYCK 288
+I+ Y K
Sbjct: 292 MINLYGK 298
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 126/276 (45%), Gaps = 2/276 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY+E + R G +EA+DVF+RM C+P+ +YN ++N+ + + K+Y M
Sbjct: 233 AYIEGLMK--RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 290
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ ++ TYT + +F R G A + + G + Y ++ + G
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A E+F M PD A++N +V + G ++E + ++ + G++P + ++ +
Sbjct: 351 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 410
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
+ + + + + +S G+ PD N+++ R + + E+ L +M N
Sbjct: 411 LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPC 470
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
D TYN +I+ Y K G ++ + + K F+
Sbjct: 471 TADISTYNILINIYGKAGFLERIEELFVELKEKNFR 506
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 119/268 (44%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + ++ R G ++A ++FE++ EP V+ YNA+M GY A +++ M
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G D +Y I + ++ R G A + M G + ++ +++ + + D
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ EM E + PD N +++ + G + EK+L ++ + ++ TYNI
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I + G L+R + + PDVVT+ + I RK V+ E +M++ G
Sbjct: 481 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 540
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILK 300
PD T ++ + V+ +L+
Sbjct: 541 APDGGTAKVLLSACSSEEQVEQVTSVLR 568
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 8/245 (3%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTG---RPHA 119
+P V +N +++ + + +A +Y+++ + TY + IK++C G R
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEF-GDRDLARELFDEMLERSLCPDVATFNKLV 178
L ++N V + Y + G + G+ + A ++F M P T+N ++
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 179 --HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
+G K ++ S KL ++ PN+ TY + REG ++A + +G
Sbjct: 272 NLYGKASKSYM--SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 329
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
+ PDV YN ++ R + E M + G +PD +YN ++D Y + G+ DA
Sbjct: 330 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 389
Query: 297 RILKD 301
+ ++
Sbjct: 390 AVFEE 394
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
S PDV FN L+ +K E+E L ++L+ P TY + I+ C G ++RA
Sbjct: 150 SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA 209
Query: 226 VVFLGSVSREGMSPD---VVTYNTVICGLC-RKSRVVESEECLHKMVNDGLQPDEFTYNT 281
V L + +SP V YN I GL RK E+ + +M D +P TYN
Sbjct: 210 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNL 269
Query: 282 IIDGYCK 288
+I+ Y K
Sbjct: 270 MINLYGK 276
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 122/258 (47%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+++E++ + +R+ + N Y+ ++ + G A KV+ M +G ++ + YT
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER 165
+ ++ C G A RLL M G S + ++ GF FG + E + M+ R
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR 403
Query: 166 SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA 225
L P + FN++V + K V + ++L K + +G P+ TY+ I+G +D+A
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 226 VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+ + MSP + ++I GLC +V E+ L M ++P+ Y+ +I
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKA 523
Query: 286 YCKKGMVQDANRILKDAV 303
+ K G +A+R+ + +
Sbjct: 524 FQKIGDKTNADRVYNEMI 541
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 35/254 (13%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+++E VD+ +R+ C PSV I+N + F + MR+++
Sbjct: 248 GRLKEVVDLLDRICGKRCLPSV-----IVNTSLVFRVLEE-----MRIEE---------- 287
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
++ LL+ + + + + Y VV + GD AR++FDEML+
Sbjct: 288 ---------------SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQ 332
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + + V C+KG V E+E+LL+++ + GVSP T+N I G R G ++
Sbjct: 333 RGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEK 392
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+ + + G+ P +N ++ + + V + E L K ++ G PDE TY+ +I
Sbjct: 393 GLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIR 452
Query: 285 GYCKKGMVQDANRI 298
G+ + + A ++
Sbjct: 453 GFIEGNDIDQALKL 466
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + ++ DVF+R+ SV + N +++ + + ++Y DK + +
Sbjct: 174 YAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPN 233
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
T I I+ C+ GR + LL + C + + ++V E + + L
Sbjct: 234 EITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLK 293
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+L +++ D ++ +V+ K+G + + K+ +++L+RG S N F Y +F++ C +G
Sbjct: 294 RLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKG 353
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
+ A L + G+SP T+N +I G R + E MV GL P +N
Sbjct: 354 DVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFN 413
Query: 281 TIIDGYCKKGMVQDANRILKDAVFKGF 307
++ K V AN IL ++ KGF
Sbjct: 414 EMVKSVSKIENVNRANEILTKSIDKGF 440
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 8/302 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
M+ LG+H++FN L+ +M ++ A M Y +A+ F+ MD +
Sbjct: 161 MIWVLGNHQKFNIAWCLIRDMFNVSKDT--RKAMFLMMDRYAAANDTSQAIRTFDIMDKF 218
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP-HA 119
P ++ ++ L G+ +A + +M K DV + + + +C
Sbjct: 219 KHTPYDEAFQGLLCALCRHGHIEKAEE-FMLASKKLFPVDVEGFNVILNGWCNIWTDVTE 277
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A R+ R M + + N +Y +++ F + G+ + L+DEM +R L P + +N LV+
Sbjct: 278 AKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVY 337
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
L ++ E+ KL+ K+ + G+ P+ TYN I+ LC G LD A L ++ E +SP
Sbjct: 338 VLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSP 397
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
V T++ + + ++ E L +M L P E T+ I+ K ++A +I
Sbjct: 398 TVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIW 453
Query: 300 KD 301
+
Sbjct: 454 AE 455
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 121/265 (45%), Gaps = 1/265 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
++S+ G +EA+ + M+ + YN +M+ + + + ++ M+DKG+
Sbjct: 351 VKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGL 410
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD-RDLAR 156
TY I + ++ R +P LLR M G N +Y +++ + D+A
Sbjct: 411 KPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAA 470
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
+ F M + L P ++ L+H G+ ++ ++ K G+ P++ TY +
Sbjct: 471 DAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF 530
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
R G + + + RE + +TYNT++ G ++ +E+ + + + GLQP
Sbjct: 531 RRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSV 590
Query: 277 FTYNTIIDGYCKKGMVQDANRILKD 301
TYN +++ Y + G ++LK+
Sbjct: 591 MTYNMLMNAYARGGQDAKLPQLLKE 615
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 3/257 (1%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y M +Y + ++E +F M +PS +YN +M+ + + M+
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 94 DKGVGSDVYTYTIRIKSFCRTGR--PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
D G+ +V +YT I ++ RT + AA LR M G ++ +Y ++ + G
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHAYSVSGW 500
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
+ A F+EM + + P V T+ ++ + G + ++ +L+ + TYN
Sbjct: 501 HEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNT 560
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
+ G ++G A + S+ G+ P V+TYN ++ R + + + L +M
Sbjct: 561 LLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALN 620
Query: 272 LQPDEFTYNTIIDGYCK 288
L+PD TY+T+I + +
Sbjct: 621 LKPDSITYSTMIYAFVR 637
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 11/294 (3%)
Query: 13 QMENLLSEMRATLENNLLEGA--YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYN 70
++E L +EMR + L A Y M +Y R + + M+ EP+V SY
Sbjct: 397 EVEGLFTEMR---DKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Query: 71 AIMNILVEFGYF-NQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
+++ + A ++RMK G+ ++YT I ++ +G A M
Sbjct: 454 CLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCK 513
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
G + Y +V+ F GD E++ ML + T+N L+ G K+G E
Sbjct: 514 EGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIE 573
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
+ ++++ K G+ P++ TYN+ + R G + L ++ + PD +TY+T+I
Sbjct: 574 ARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIY 633
Query: 250 GLCRKSRVVESEECLHK-MVNDGLQPDEFTYN---TIIDGYCKKGMVQDANRIL 299
R R + HK MV G PD +Y I++ K +D IL
Sbjct: 634 AFVR-VRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKDKTAIL 686
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 2/245 (0%)
Query: 66 VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP-HAALRLL 124
V YNA ++ L ++ A +VY M V D T I I + + GR +
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIF 332
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
MS G ++ + +V F + G ++ A + EM ++ + + +N L+ K
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
+ E E L ++ +G+ P+ TYNI + R D L + G+ P+V +Y
Sbjct: 393 NHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSY 452
Query: 245 NTVICGLCRKSRVVE-SEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
+I R ++ + + + +M GL+P +Y +I Y G + A ++
Sbjct: 453 TCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 304 FKGFK 308
+G K
Sbjct: 513 KEGIK 517
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 111/281 (39%), Gaps = 6/281 (2%)
Query: 18 LSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILV 77
L EM + E + + VEA+ G G V+ + +E M L EPS+ S A +
Sbjct: 189 LGEMLSGFERRVSDTECVEALVMMGESGFVKSCLYFYEWMSLQ--EPSLASPRACSVLFT 246
Query: 78 EFGYFNQAHKVYM---RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSF 134
G A + + + DK DV Y I + R A + M
Sbjct: 247 LLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYP 306
Query: 135 NAVAYCTVVAGFYEFG-DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKL 193
+ V ++ + G E+F++M E+ + F LV C +G E+ +
Sbjct: 307 DNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVI 366
Query: 194 LNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCR 253
++ K+G+ N YN + + ++ + +G+ P TYN ++ R
Sbjct: 367 QTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYAR 426
Query: 254 KSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
+ + E L +M + GL+P+ +Y +I Y + + D
Sbjct: 427 RMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSD 467
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 35/341 (10%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+L+ LG + F+ M ++L M N LE + AM S+ R V+ A+++FE + +
Sbjct: 157 ILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTI-AMDSFVRVHYVRRAIELFEESESF 215
Query: 61 NCEPSVHSYNAIMNILVE----------------------------------FGYFNQAH 86
+ S S+NA++ L E G +
Sbjct: 216 GVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEME 275
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
KV M + G G D +Y+ I+ RTGR + ++ + N+ G +A Y ++ F
Sbjct: 276 KVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNF 335
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
D D + + ML+ P++ T++KLV GL K V ++ ++ ++L RGV P
Sbjct: 336 ISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTT 395
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
F++ LC G A+V + G Y ++ L R + +
Sbjct: 396 GLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDE 455
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
M G D Y I+DG C G +++A ++++A+ KGF
Sbjct: 456 MQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGF 496
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 13/247 (5%)
Query: 66 VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR 125
V SY+ I+ L F+ V M +GV D+ TI + SF R A+ L
Sbjct: 151 VGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFE 210
Query: 126 NMSVFGC-----SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP-DVATFNKLVH 179
FG SFNA+ C E A+ +F+ ++ P D ++N ++
Sbjct: 211 ESESFGVKCSTESFNALLRC-----LCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMIS 263
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
G K G V E EK+L ++++ G P+ +Y+ I+GL R G ++ +V ++ +G P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
D YN +IC ES +M+++ +P+ TY+ ++ G K V DA I
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 300 KDAVFKG 306
++ + +G
Sbjct: 384 EEMLSRG 390
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 117/260 (45%), Gaps = 3/260 (1%)
Query: 32 GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMR 91
G+Y +R+ GR +DV + M P + M+ V Y +A +++
Sbjct: 152 GSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEE 211
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPH-AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
+ GV ++ ++ C R H +A + + N F++ +Y +++G+ + G
Sbjct: 212 SESFGVKCSTESFNALLRCLCE--RSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLG 269
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
+ + ++ EM+E PD +++ L+ GL + G + +S ++ + + +G P+ YN
Sbjct: 270 EVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYN 329
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I D ++ + + E P++ TY+ ++ GL + +V ++ E +M++
Sbjct: 330 AMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSR 389
Query: 271 GLQPDEFTYNTIIDGYCKKG 290
G+ P + + C G
Sbjct: 390 GVLPTTGLVTSFLKPLCSYG 409
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 41/244 (16%)
Query: 3 QKLGHHREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERM---- 57
KLG E +ME +L EM + + L +Y + GR G++ ++V++F+ +
Sbjct: 266 SKLG---EVEEMEKVLKEMVESGFGPDCL--SYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 58 -----DLYN--------------------------CEPSVHSYNAIMNILVEFGYFNQAH 86
++YN CEP++ +Y+ +++ L++ + A
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
+++ M +GV T +K C G PHAA+ + + GC + AY ++
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL 440
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
FG + ++DEM E DV + +V GLC G + + ++ + +++G PN
Sbjct: 441 SRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNR 500
Query: 207 FTYN 210
F Y+
Sbjct: 501 FVYS 504
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 99/250 (39%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y + + + G+V+E V + M P SY+ ++ L G N + +++ +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K KG D Y I +F ++R R M C N Y +V+G +
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKV 376
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A E+F+EML R + P + LC G + + K K G + Y +
Sbjct: 377 SDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLL 436
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
++ L R G + + G DV Y ++ GLC + + + + + G
Sbjct: 437 LKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGF 496
Query: 273 QPDEFTYNTI 282
P+ F Y+ +
Sbjct: 497 CPNRFVYSRL 506
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
E + DV +++ ++ L ++ +L ++ GV+P+L I + R +
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQP-DEFTYNTI 282
RA+ G+ ++N ++ LC +S V ++ + G P D +YN +
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIM 261
Query: 283 IDGYCKKGMVQDANRILKDAVFKGF 307
I G+ K G V++ ++LK+ V GF
Sbjct: 262 ISGWSKLGEVEEMEKVLKEMVESGF 286
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 30/294 (10%)
Query: 40 SYGRFGKVQEAVDVF-ERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVG 98
SY + G V A+ +F + +VH Y ++ + G ++A + MRM D G+
Sbjct: 351 SYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIV 410
Query: 99 SDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFN----------------------- 135
D TY + +K + A+ +L+++ GC N
Sbjct: 411 PDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIAR 470
Query: 136 ------AVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
AV V + A ++M+ P ++N ++ L ++ + +
Sbjct: 471 KDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIED 530
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
L+N + + P++ TY I + LC++ D A + ++ G+ P V Y+++I
Sbjct: 531 LASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIG 590
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
L ++ RVVE+EE KM+ G+QPDE Y +I+ Y + G + +AN ++++ V
Sbjct: 591 SLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVV 644
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 136/309 (44%), Gaps = 42/309 (13%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E AY+ + +Y R G++ EA ++ E + + PS +Y +++ V+ G + +
Sbjct: 617 EIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLD 676
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYE-- 148
+M + G+ +V YT I F + G + L M + +AY T+++G +
Sbjct: 677 KMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAM 736
Query: 149 ------------------------------------FGDRDLARELFDEMLERSLCPDVA 172
+G + A E+ + +++S+ P++
Sbjct: 737 ARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGK-VKKSIIPNLY 795
Query: 173 TFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV 232
N ++ G C G + E+ L + K G+ PNL TY I ++ G ++ A+
Sbjct: 796 LHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGT 855
Query: 233 SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
+ E PD V Y+T++ GLC R +++ + +M G+ P++ +Y ++ C +
Sbjct: 856 NCE---PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLT 912
Query: 293 QDANRILKD 301
+A +++KD
Sbjct: 913 MEAVKVVKD 921
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 1/170 (0%)
Query: 111 FCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPD 170
FC+ G A L +M V G + V Y ++ + + + +A L+ M+ERS D
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELD 306
Query: 171 VATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV-VFL 229
FN L+HG K G + + + ++++K+GV N+FTY+I I C+EG +D A+ +F+
Sbjct: 307 PCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFV 366
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTY 279
+ E +S +V Y +I G +K + ++ + L +M+++G+ PD TY
Sbjct: 367 NNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%)
Query: 50 AVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIK 109
A+ E+M C P SYN+++ L + + +++ DV TY I +
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 110 SFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
C+ AA ++ M G Y +++ + G A E F +MLE + P
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
D + +++ + G + E+ +L+ +V+K + P+ FTY + I G + G +++ +L
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYL 675
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
+ +G+SP+VV Y +I +K S M + ++ D Y T++ G +
Sbjct: 676 DKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWR 734
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 15/284 (5%)
Query: 19 SEMRATLENNLLEGAYVEA------MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAI 72
+E A ++ ++G YV+ M+ Y + + A+ ++ RM + E +N +
Sbjct: 254 AEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTL 313
Query: 73 MNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL-LRNMSVFG 131
++ ++ G ++ ++ +M KGV S+V+TY I I S+C+ G ALRL + N
Sbjct: 314 IHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSED 373
Query: 132 CSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESE 191
S N Y ++ GFY+ G D A +L ML+ + PD T+ L+ L K + +
Sbjct: 374 ISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAM 433
Query: 192 KLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV-VFLGSVSREGMSPDVVTYNTVICG 250
+L +L G N + G ++ V LG ++R+ + V V
Sbjct: 434 VILQSILDNGCGINPPVIDDL-------GNIEVKVESLLGEIARKDANLAAVGLAVVTTA 486
Query: 251 LCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
LC + + + + KMVN G P F+YN++I ++ +++D
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIED 530
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 136/326 (41%), Gaps = 47/326 (14%)
Query: 15 ENLLSEMRATLENNLLEGAYVEAMRSY-------GRFGKVQEAVDVFERMDLYNCEPSVH 67
EN++ ++ A+L N + E +V + +Y + A + + M+ P+V
Sbjct: 525 ENIIEDL-ASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVA 583
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
Y++I+ L + G +A + + +M + G+ D Y I I ++ R GR A L+ +
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV 643
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
++ Y +++GF + G + + D+MLE L P+V + L+ KKG
Sbjct: 644 VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF 703
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCR----------------EGALDR------- 224
S L + + + + Y + GL R E L R
Sbjct: 704 KFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPL 763
Query: 225 ---------------AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
A+ +G V ++ + P++ +NT+I G C R+ E+ L M
Sbjct: 764 VSIPSSLGNYGSKSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQK 822
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDA 295
+G+ P+ TY ++ + + G ++ A
Sbjct: 823 EGIVPNLVTYTILMKSHIEAGDIESA 848
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
+I + L +G + A +V ++K K + ++Y + I +C GR A L +M
Sbjct: 765 SIPSSLGNYGSKSFAMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKE 823
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC-PDVATFNKLVHGLCKKGFVPE 189
G N V Y ++ E GD + A +LF E + C PD ++ L+ GLC +
Sbjct: 824 GIVPNLVTYTILMKSHIEAGDIESAIDLF----EGTNCEPDQVMYSTLLKGLCDFKRPLD 879
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
+ L+ ++ K G++PN +Y +Q LC AV + ++ + P + + +I
Sbjct: 880 ALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIY 939
Query: 250 GLCRKSRVVESEECLHKMVNDG 271
LC + ++ E+ MV G
Sbjct: 940 ILCEEKKLREARALFAIMVQSG 961
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 4/199 (2%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
S G +G A++V ++ + P+++ +N I+ G ++A+ M+ +G+
Sbjct: 769 SLGNYGSKSFAMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVP 827
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
++ TYTI +KS G +A+ L + C + V Y T++ G +F A L
Sbjct: 828 NLVTYTILMKSHIEAGDIESAIDLFEGTN---CEPDQVMYSTLLKGLCDFKRPLDALALM 884
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCRE 219
EM + + P+ ++ KL+ LC E+ K++ + + P + I LC E
Sbjct: 885 LEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEE 944
Query: 220 GALDRAVVFLGSVSREGMS 238
L A + + G S
Sbjct: 945 KKLREARALFAIMVQSGRS 963
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 92/236 (38%), Gaps = 1/236 (0%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P ++++ LV+ F++A R+ G + ++ + C R A
Sbjct: 129 PDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHC 188
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP-DVATFNKLVHGLC 182
+ G + G G + A + D + + P V + L + C
Sbjct: 189 FEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFC 248
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K+G E+E L + + G + Y ++ C++ + A+ + D
Sbjct: 249 KRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPC 308
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
+NT+I G + + + +M+ G+Q + FTY+ +I YCK+G V A R+
Sbjct: 309 IFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRL 364
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 12/222 (5%)
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAA-----LRLLRNMSVFGCS-FNAVAYCTVVAGFY 147
D G+ D Y I+ G+P A R++ N V S +++ +C V
Sbjct: 88 DNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLV----- 142
Query: 148 EFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
+ D AR D ++ P + + +V LC + E+ +V +RG L+
Sbjct: 143 KLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLW 202
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSP-DVVTYNTVICGLCRKSRVVESEECLHK 266
+GLC G L+ A+ L ++ P V Y ++ C++ E+E
Sbjct: 203 CCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDH 262
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
M DG D+ Y ++ YCK + A R+ V + F+
Sbjct: 263 MEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFE 304
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 33/315 (10%)
Query: 2 LQKLGHHREFNQMENLLSEMRATLENNL---LEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
+Q+L + F+ +E L+ + NN E +RSYGR A+ +FE MD
Sbjct: 74 VQRLAKSQRFSDIEALIESHK----NNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMD 129
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK--GVGSDVYTYTIRIKSFCRTGR 116
+V S+NA++ + F + +++ + + D +Y + IKS+C +G+
Sbjct: 130 KLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGK 189
Query: 117 PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNK 176
P A+ ++R+M V G +A+ T++ Y+ G D A L+ EM+ + D +N
Sbjct: 190 PEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNV 249
Query: 177 LVHGLCKKGFVPESEK-LLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE 235
+ K+ PE K L+ ++ G+ P+ +YN + C +G + A E
Sbjct: 250 RLMNAAKES--PERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVY-----E 302
Query: 236 GM-SPDVVTYNTVICGLC------RKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
G+ P+ T+ T+I LC + V + +HK+ PD T + +G K
Sbjct: 303 GLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKI------PDFKTCKHLTEGLVK 356
Query: 289 KGMVQDAN---RILK 300
++DA RI+K
Sbjct: 357 NNRMEDARGVARIVK 371
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 138/302 (45%), Gaps = 7/302 (2%)
Query: 2 LQKLGHHREFNQMENLLS---EMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
++ L + F+ + NLL E R L++ E A+ Y + + ++ VF ++
Sbjct: 87 VENLAEKKHFSAVSNLLDGFIENRPDLKS---ERFAAHAIVLYAQANMLDHSLRVFRDLE 143
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM-KDKGVGSDVYTYTIRIKSFCRTGRP 117
+ +V S NA++ + + +A +VY+ M K G+ D+ TY IK FC +G
Sbjct: 144 KFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSA 203
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
++ ++ M G N+ ++ +++GFY D ++ M +R + V+T+N
Sbjct: 204 SSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIR 263
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ LCK+ E++ LL+ +L G+ PN TY+ I G C E + A + G
Sbjct: 264 IQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGC 323
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
PD Y T+I LC+ + + + P ++++G K V++A
Sbjct: 324 KPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKE 383
Query: 298 IL 299
++
Sbjct: 384 LI 385
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
Query: 53 VFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFC 112
+ M+ +P+ S+ +++ ++ KV MKD+GV V TY IRI+S C
Sbjct: 209 IVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLC 268
Query: 113 RTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVA 172
+ + A LL M G N V Y ++ GF D + A++LF M+ R PD
Sbjct: 269 KRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSE 328
Query: 173 TFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV 232
+ L++ LCK G + L + +++ P+ + GL ++ ++ A +G V
Sbjct: 329 CYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
Query: 233 SREGMSPDVVTYNTVICGL 251
+E + +V +N V L
Sbjct: 389 -KEKFTRNVELWNEVEAAL 406
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 120 ALRLLRNMSVFGCS-----FNAVAYCTVVAGFYEFGDRDLARELFDEMLER-SLCPDVAT 173
+LR+ R++ F S NA+ + +VA Y+ R ++ EM + + PD+ T
Sbjct: 135 SLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKR-----VYIEMPKMYGIEPDLET 189
Query: 174 FNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVS 233
+N+++ C+ G S ++ ++ ++G+ PN ++ + I G E D L +
Sbjct: 190 YNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMK 249
Query: 234 REGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQ 293
G++ V TYN I LC++ + E++ L M++ G++P+ TY+ +I G+C + +
Sbjct: 250 DRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFE 309
Query: 294 DANRILKDAVFKGFK 308
+A ++ K V +G K
Sbjct: 310 EAKKLFKIMVNRGCK 324
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 13/282 (4%)
Query: 14 MENLLSEMRATLENNLLE------GA-----YVEAMRSYGRFGKVQEAVDVFERMDLYNC 62
ME+L E+ N+LE GA Y +R E ++V M +C
Sbjct: 384 MESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDC 443
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRM-KDKGVGSDVYTYTIRIKSFCRTGRPHAAL 121
P ++ N ++N L + G + A KV M K D T + GR AL
Sbjct: 444 RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEAL 503
Query: 122 RLL-RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
+L R M VAY V+ G ++ D A +F ++ + S+ D T+ ++ G
Sbjct: 504 DVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDG 563
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
LC V ++K + V+ + F Y F++GLC+ G L A FL ++ G P+
Sbjct: 564 LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPN 623
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
VV YNTVI R E+ + L +M +G PD T+ +
Sbjct: 624 VVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 2/245 (0%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
PS ++Y +M L + +A V M K Y I ++ C P L +
Sbjct: 375 PSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNV 434
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC-PDVATFNKLVHGLC 182
L +M C + TV+ G + G D A ++ D+M+ C PD T N ++ GL
Sbjct: 435 LVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLL 494
Query: 183 KKGFVPESEKLLNKVLKRG-VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
+G E+ +LN+V+ + P + YN I+GL + D A+ G + + ++ D
Sbjct: 495 AQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADS 554
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
TY +I GLC ++V +++ ++ + D F Y + G C+ G + DA L D
Sbjct: 555 TTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYD 614
Query: 302 AVFKG 306
G
Sbjct: 615 LADSG 619
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 118/319 (36%), Gaps = 75/319 (23%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
PS+ +YN +MN L AHK+ M+++G DV T+T I +C A ++
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML-----ERSLCPDVATFNKLV 178
M V G N++ ++ GF + D + R+L E+ E A F LV
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 179 HGLCKKGF------VPESEKLLNKV-----------------------------LKRGVS 203
+C++G+ + E+ L V +G+
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT-------------------- 243
P +YN I GLC++G RA L S P T
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 244 ---------------YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
YN + GLC E L M+ +PDE+T NT+I+G CK
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 289 KGMVQDANRILKDAVFKGF 307
G V DA ++L D + F
Sbjct: 460 MGRVDDAMKVLDDMMTGKF 478
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 2/277 (0%)
Query: 14 MENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIM 73
M+ L M+ + ++ A+ + S R G + ++ E M L +Y ++
Sbjct: 255 MKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMI 314
Query: 74 NILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCS 133
+ L + + A ++ MK KG+ +Y I C+ G A +LL S F
Sbjct: 315 DSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFF 374
Query: 134 FNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKL 193
+ Y ++ + D AR + + ML + +N + GLC E +
Sbjct: 375 PSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNV 434
Query: 194 LNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGS-VSREGMSPDVVTYNTVICGLC 252
L +L+ P+ +T N I GLC+ G +D A+ L ++ + +PD VT NTV+CGL
Sbjct: 435 LVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLL 494
Query: 253 RKSRVVESEECLHK-MVNDGLQPDEFTYNTIIDGYCK 288
+ R E+ + L++ M + ++P YN +I G K
Sbjct: 495 AQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK 531
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 5/231 (2%)
Query: 80 GYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAY 139
GYFN ++ M + + Y I S CR R H A R++ M G +Y
Sbjct: 286 GYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSY 345
Query: 140 CTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
++ G + G A +L +E E P T+ L+ LCK+ ++ +L +L+
Sbjct: 346 NAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLR 405
Query: 200 RGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVE 259
+ + YNI+++GLC + L S+ + PD T NTVI GLC+ RV +
Sbjct: 406 KEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDD 465
Query: 260 SEECLHKMVNDGL-QPDEFTYNTIIDGYCKKGMVQDA----NRILKDAVFK 305
+ + L M+ PD T NT++ G +G ++A NR++ + K
Sbjct: 466 AMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIK 516
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 2/204 (0%)
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFG-CSFNAVAYCTVVAGFYEFGDRDLAREL 158
D YT I C+ GR A+++L +M C+ +AV TV+ G G + A ++
Sbjct: 446 DEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV 505
Query: 159 FDE-MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ M E + P V +N ++ GL K E+ + ++ K V+ + TY I I GLC
Sbjct: 506 LNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLC 565
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+D A F V D Y + GLC+ + ++ L+ + + G P+
Sbjct: 566 VTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVV 625
Query: 278 TYNTIIDGYCKKGMVQDANRILKD 301
YNT+I + G+ ++A +IL++
Sbjct: 626 CYNTVIAECSRSGLKREAYQILEE 649
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 3/206 (1%)
Query: 99 SDVYTYTIRIKSFCRTGR-PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+D + RI S C R P ALR+L + + G +++ +V+ + G D A
Sbjct: 52 TDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHR 111
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVL--KRGVSPNLFTYNIFIQG 215
F L PD T N ++ L + ++++++ K+ P+L YN +
Sbjct: 112 RFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQ 171
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
LC + A + + G PDVVT+ T+I G C + + + +M G++P+
Sbjct: 172 LCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPN 231
Query: 276 EFTYNTIIDGYCKKGMVQDANRILKD 301
T + +I G+ K V+ +++K+
Sbjct: 232 SLTLSVLIGGFLKMRDVETGRKLMKE 257
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
D A + D + R PD + ++H LC G E+ + L G P+ T N+
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 213 IQGLCREGALDRAVVFLGSVSR-----EGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
I L + V LG + R + P + YN ++ LC RV+++ + + M
Sbjct: 132 IARLLYSRS---PVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDM 188
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
N G PD T+ T+I GYC+ ++ A+++ + G +
Sbjct: 189 RNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIR 229
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 107/271 (39%), Gaps = 13/271 (4%)
Query: 48 QEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIR 107
EA+ + + + L P + +++++ L + G F++AH+ ++ G D T +
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSF-----NAVAYCTVVAGFYEFGDRDLARELFDEM 162
I + P + L ++ + F F N + Y D A +L +M
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVID---AHKLVFDM 188
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
R PDV TF L+ G C+ + + K+ +++ G+ PN T ++ I G + +
Sbjct: 189 RNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDV 248
Query: 223 DRAVVFLGSV-----SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+ + + + S + ++ +CR+ + E M EF
Sbjct: 249 ETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEF 308
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
Y +ID C+ A RI+ KG K
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 132/290 (45%), Gaps = 6/290 (2%)
Query: 13 QMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAI 72
++E LL EM + + EG + + + Y ++AV +F+ M P Y +
Sbjct: 165 EVELLLMEMERHGDTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQIL 224
Query: 73 MNILVEFGYFNQAHKV---YMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
++ LV A+++ ++ + + ++ + I+ C + A L R +
Sbjct: 225 IDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVA 284
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
GC N+ Y + G+ E D + +L + E PDV N+++H LC++
Sbjct: 285 LGCILNSSIYSKITIGYNEKQDFE---DLLSFIGEVKYEPDVFVGNRILHSLCRRFGSER 341
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
+ + ++ G + T+ I I C EG + RAV++L + +G PDV +YN ++
Sbjct: 342 AYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILS 401
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
GL RK + L +M +G+ T+ ++ GYCK ++A RI+
Sbjct: 402 GLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIV 451
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 119/242 (49%), Gaps = 11/242 (4%)
Query: 72 IMNILVEFGYFNQAH----KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
I N+L+ + + + H KV + M+ +GV D T+ + + + ++LR L M
Sbjct: 911 IYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAM 970
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER--SLCPDVATFNKLVHGLCKKG 185
G N + V + + GD A +L+ M + +L V K+V L KG
Sbjct: 971 ISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQ-TKIVETLISKG 1029
Query: 186 FVPESEKLLNKVLKRGV-SPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
+P++E L +V + G+ +PN Y+ I+ L G LD AV L ++ + P +Y
Sbjct: 1030 EIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSY 1086
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVF 304
++VI GL R +++ ++ + +MV GL P T++ ++ +C+ V ++ R++K V
Sbjct: 1087 DSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVG 1146
Query: 305 KG 306
G
Sbjct: 1147 LG 1148
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 119/284 (41%), Gaps = 37/284 (13%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G ++ AV + +P V+SYNAI++ L G + H + MK+ G+ + T+
Sbjct: 372 GDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTF 431
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGC------------SFNAVAYCTVVA-------- 144
I + +C+ + A R++ M +G +F+ V + +
Sbjct: 432 KIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDS 491
Query: 145 -------------GFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESE 191
G Y D D + + +L+RS+ P+ FN L+ + G + +
Sbjct: 492 TFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTAL 548
Query: 192 KLLNKVLKRGVSPNLFTYNIFIQGLCREGA-LDRAVVFLGSVSREGMSPDVVTYNTVICG 250
+LL+++ + G + ++ + ++ LC A L ++ L + D T N ++
Sbjct: 549 RLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQE 608
Query: 251 LCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
C+K S+ HKMV D TY ++I +CKK + D
Sbjct: 609 YCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLND 652
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 45 GKVQEAVDVFERMDL--YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
G V++A+D+++ M+ +N SV I+ L+ G +A R+ G+ + Y
Sbjct: 993 GDVKKALDLWQVMESKGWNLGSSVVQ-TKIVETLISKGEIPKAEDFLTRVTRNGMMAPNY 1051
Query: 103 TYTIRIKSFCRTGRPHAALRLL----RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAREL 158
I K G A+ LL +N S+ G S +Y +V+ G + D A +
Sbjct: 1052 DNII--KKLSDRGNLDIAVHLLNTMLKNQSIPGSS----SYDSVINGLLRYNQLDKAMDF 1105
Query: 159 FDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCR 218
EM+E L P ++T++ LVH C+ V ESE+L+ ++ G SP+ + I
Sbjct: 1106 HTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRV 1165
Query: 219 EGALDRAVVFLGSVSREGMSPDVVTYNTVICGL 251
E +A + + + G D T+ ++I +
Sbjct: 1166 EKNTVKASEMMEMMQKCGYEVDFETHWSLISNM 1198
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 117/300 (39%), Gaps = 38/300 (12%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R G V+E V +FER+ + + + L G+ AH V R++ +G +
Sbjct: 681 RKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQE 740
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNM----------------------SVFGCSFN----- 135
Y IK C + AA +L M + G +FN
Sbjct: 741 VYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQI 800
Query: 136 --AVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKL 193
+ + ++ G G A ML L +N + G CK + E++
Sbjct: 801 DSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEV 860
Query: 194 LNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV-----VFLGSVSREGMSPDVVTYNTVI 248
L ++++ + ++ +Y +++ +C E A+ + LG + G V+ YN +I
Sbjct: 861 LGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGG----VIIYNMLI 916
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+ R +E + L +M G+ PDE T+N ++ GY + R L + KG K
Sbjct: 917 FYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMK 976
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 103/223 (46%), Gaps = 5/223 (2%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG--VGSDVYTYTIRIKSFCRTGRPHAA 120
+P+ S A+ + L + G +A ++ M+ KG +GS V I +++ G A
Sbjct: 976 KPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKI-VETLISKGEIPKA 1034
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
L ++ G A Y ++ + G+ D+A L + ML+ P ++++ +++G
Sbjct: 1035 EDFLTRVTRNG--MMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVING 1092
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
L + + ++ ++++ G+SP++ T++ + C + + + S+ G SP
Sbjct: 1093 LLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPS 1152
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
+ TVI + V++ E + M G + D T+ ++I
Sbjct: 1153 QEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLI 1195
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 145/309 (46%), Gaps = 3/309 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+++ L + + ++L + + + + E + + + +YG G+++EA++VF ++ +
Sbjct: 78 VIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNF 137
Query: 61 NCEPSVHSYNAIMNILV-EFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
C PS ++ NA++ +LV + ++ ++ GV + T+ I I + CR G
Sbjct: 138 RCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDC 197
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAREL--FDEMLERSLCPDVATFNKL 177
A L+R MS + Y +++ + D + +++ + P + + +
Sbjct: 198 ATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVV 257
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ L + G E +LN++ V P+L Y I +QG+ + +A + G+
Sbjct: 258 MRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGL 317
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
+PDV TYN I GLC+++ + + + + M G +P+ TYN +I K G + A
Sbjct: 318 APDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKT 377
Query: 298 ILKDAVFKG 306
+ K+ G
Sbjct: 378 LWKEMETNG 386
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
YT+ ++ GR + +L M + V Y V+ G D A +LFDE+L
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELL 313
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
L PDV T+N ++GLCK+ + + K+++ + K G PN+ TYNI I+ L + G L
Sbjct: 314 LLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLS 373
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT-- 281
RA + G++ + T++ +I VV C H ++ + + F ++
Sbjct: 374 RAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVV----CAHGLLEEAFNMNVFVKSSRI 429
Query: 282 --IIDGYCKKGMVQDANRILKDAV 303
+I C+KG++ A +L V
Sbjct: 430 EEVISRLCEKGLMDQAVELLAHLV 453
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
Y MR G+ +E V V +M EP + Y ++ ++ + +A K++ +
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELL 313
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
G+ DVYTY + I C+ AL+++ +M+ G N V Y ++ + GD
Sbjct: 314 LLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLS 373
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A+ L+ EM + + TF+ ++ + V V G+ F N+F+
Sbjct: 374 RAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEV---------VCAHGLLEEAFNMNVFV 424
Query: 214 QG---------LCREGALDRAVVFLG 230
+ LC +G +D+AV L
Sbjct: 425 KSSRIEEVISRLCEKGLMDQAVELLA 450
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 142/341 (41%), Gaps = 36/341 (10%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+L LG R F + + EM + + + E Y + Y KV EAV VFER +
Sbjct: 149 ILDVLGKMRRFEEFHQVFDEM-SKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEF 207
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
+ + +++ ++ L + + A ++ + + G D+ + + +C G H A
Sbjct: 208 GIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRR-REFGCDIKAMNMILNGWCVLGNVHEA 266
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
R +++ C + V+Y T++ + G A EL+ M + PDV N ++
Sbjct: 267 KRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDA 326
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG--MS 238
LC K +PE+ ++ ++ ++G PN+ TYN ++ LC+ ++ + + +G S
Sbjct: 327 LCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCS 386
Query: 239 PDVVT--------------------------------YNTVICGLCRKSRVVESEECLHK 266
P+ VT YN + + + + E +
Sbjct: 387 PNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSE 446
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
M GL PD+ TY I G KG + +A ++ + KG
Sbjct: 447 MERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM 487
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 1/238 (0%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN I+++L + F + H+V+ M + + TY + + + + A+ +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
FG + VA+ ++ + + A LF C D+ N +++G C G V
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC-DIKAMNMILNGWCVLGNVH 264
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E+++ ++ P++ +Y I L ++G L +A+ ++ +PDV N VI
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
LC K R+ E+ E ++ G P+ TYN+++ CK + ++++ KG
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 5/237 (2%)
Query: 44 FGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT 103
G V EA ++ + C P V SY ++N L + G +A ++Y M D DV
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKI 319
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
I + C R AL + R +S G N V Y +++ + + EL +EM
Sbjct: 320 CNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
Query: 164 ER--SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
+ S P+ TF+ L+ + V + +L ++ K YN+ + +
Sbjct: 380 LKGGSCSPNDVTFSYLLKYSQRSKDV---DIVLERMAKNKCEMTSDLYNLMFRLYVQWDK 436
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFT 278
++ + R G+ PD TY I GL K ++ E+ +M++ G+ P+ T
Sbjct: 437 EEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 90/229 (39%), Gaps = 37/229 (16%)
Query: 32 GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMR 91
G + A+ G+ GK A++++ M P V N +++ L +A +V+
Sbjct: 286 GTMINALTKKGKLGK---AMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFRE 342
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFG--CSFNAVAY---------- 139
+ +KG +V TY +K C+ R L+ M + G CS N V +
Sbjct: 343 ISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRS 402
Query: 140 --------------CTVVAGFY--------EFGDRDLARELFDEMLERSLCPDVATFNKL 177
C + + Y ++ + RE++ EM L PD T+
Sbjct: 403 KDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIR 462
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
+HGL KG + E+ +++ +G+ P T + Q + D+ +
Sbjct: 463 IHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLLNQNKTKPRVEDKML 511
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
AL +LR F + VAY V+ F + GD ++A L EM L PDV T+ +++
Sbjct: 149 ALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMIN 208
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG--- 236
G C G + ++ +L ++ K N TY+ ++G+C+ G ++RA+ L + +E
Sbjct: 209 GYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGG 268
Query: 237 -MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG 285
+SP+ VTY VI C K RV E+ L +M N G P+ T +I G
Sbjct: 269 LISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 17/250 (6%)
Query: 49 EAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRI 108
EA+ V + +N +YN ++ + + G N A + M G+ DV TYT I
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 109 KSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS-- 166
+C G+ A RL + MS C N+V Y ++ G + GD + A EL EM +
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGG 267
Query: 167 --LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG---- 220
+ P+ T+ ++ C+K V E+ +L+++ RG PN T + IQG+
Sbjct: 268 GLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVK 327
Query: 221 ALDRAV---VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
AL + + V LG VS +++ L R R E+E+ M+ G++PD
Sbjct: 328 ALSKLIDKLVKLGGVSLSE------CFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGL 381
Query: 278 TYNTIIDGYC 287
+ + C
Sbjct: 382 ACSHVFRELC 391
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 4/194 (2%)
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAAL 121
C +V + ++ + + ++A V + + V +D Y + I+ F G + A
Sbjct: 126 CFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIAD 185
Query: 122 RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGL 181
L++ M G + + Y +++ G+ G D A L EM + + T+++++ G+
Sbjct: 186 MLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGV 245
Query: 182 CKKGFVPESEKLLNKVLKRG----VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
CK G + + +LL ++ K +SPN TY + IQ C + ++ A++ L + G
Sbjct: 246 CKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGC 305
Query: 238 SPDVVTYNTVICGL 251
P+ VT +I G+
Sbjct: 306 MPNRVTACVLIQGV 319
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 176 KLVHGLCKKG-FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
++V LC + E+ +L K + V + YN+ I+ +G L+ A + + +
Sbjct: 134 RIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDC 193
Query: 235 EGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
G+ PDV+TY ++I G C ++ ++ +M + TY+ I++G CK G ++
Sbjct: 194 VGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMER 253
Query: 295 ANRILKD 301
A +L +
Sbjct: 254 ALELLAE 260
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 124/273 (45%), Gaps = 2/273 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + + G + +A +FE M +P++ Y +++++ + ++A M
Sbjct: 146 TYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYM 205
Query: 93 KD-KGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
K DV+T+T+ I C+ GR ++ MS G + V Y T++ G+ + G
Sbjct: 206 KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGM 265
Query: 152 RDLARELFDEMLER-SLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
+ + +M+E PDV T N ++ + + E ++ GV P++ T+N
Sbjct: 266 FEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFN 325
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I I + G + + + + S VTYN VI + R+ + ++ KM
Sbjct: 326 ILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQ 385
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
G++P+ TY ++++ Y K G+V + +L+ V
Sbjct: 386 GVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV 418
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 134/298 (44%), Gaps = 15/298 (5%)
Query: 1 MLQKLGHHREFNQ----MENLLSE-MRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFE 55
+ + LG+ ++ +Q E +LSE ++ T++ Y + YG+ + +A E
Sbjct: 150 LFKVLGNCKQPDQASLLFEVMLSEGLKPTID------VYTSLISVYGKSELLDKAFSTLE 203
Query: 56 RM-DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRT 114
M + +C+P V ++ +++ + G F+ + + M GVG TY I + +
Sbjct: 204 YMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKA 263
Query: 115 GRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR--ELFDEMLERSLCPDVA 172
G +L +M G S V + G Y G R++ + + + PD+
Sbjct: 264 GMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNG-RNMRKMESWYSRFQLMGVQPDIT 322
Query: 173 TFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV 232
TFN L+ K G + +++ + KR S TYNI I+ + G +++ +
Sbjct: 323 TFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKM 382
Query: 233 SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
+G+ P+ +TY +++ + VV+ + L ++VN + D +N II+ Y + G
Sbjct: 383 KYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAG 440
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 169 PDVATFNKL--VHGLCKKGFVPESEKLLNKV-LKRGVSPNLFTYNIFIQGLCREGALDRA 225
P T+ KL V G CK+ P+ LL +V L G+ P + Y I + LD+A
Sbjct: 142 PRCKTYTKLFKVLGNCKQ---PDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKA 198
Query: 226 ---VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
+ ++ SVS PDV T+ +I C+ R + + +M G+ TYNTI
Sbjct: 199 FSTLEYMKSVS--DCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTI 256
Query: 283 IDGYCKKGMVQDANRILKDAVFKG 306
IDGY K GM ++ +L D + G
Sbjct: 257 IDGYGKAGMFEEMESVLADMIEDG 280
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
+G+ GK + A DVF + + + P+ +Y + L + + + A V +M GV S+
Sbjct: 241 FGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSE 300
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA---------------- 144
I FC+ G+ A + S T++
Sbjct: 301 GEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEML 360
Query: 145 ----------GFYEFGD--------RDL--ARELFDEMLERSLCPDVATFNKLVHGLCKK 184
G F D R++ A+ L +M+ + P A FN +VH K
Sbjct: 361 GDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKT 420
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
G + E++++L + RG+ P+++TY + I G + G +D A L ++ VTY
Sbjct: 421 GDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTY 480
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+ +I G C+ E+ + L++M G+QP+ YN +I +C K + + +L
Sbjct: 481 HALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVL 535
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 66 VHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLR 125
+ ++ +++ L A + + M KG + + + + +TG A +L+
Sbjct: 372 IKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 126 NMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKG 185
M G + Y +++G+ + G D A+E+ E ++ T++ L+ G CK
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIE 491
Query: 186 FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD--RAVVFLGSVSREGMSPDVVT 243
E+ KLLN++ + GV PN YN IQ C + ALD +A V + ++G+
Sbjct: 492 EYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLK-ALDWEKAEVLFEEMKQKGLH----- 545
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDG 271
N + GL R + +ESE K+ DG
Sbjct: 546 LNAISQGLIRAVKEMESE---AKVTEDG 570
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 92/233 (39%), Gaps = 40/233 (17%)
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
I F + G+ AA + FG + NA Y + + D A + ++ML+ +
Sbjct: 238 IALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGV 297
Query: 168 CPDVATFNKLVHGLCKKGFVPESEKL--LNKVLKRGVSPNLFTYNIFIQGLCR-EGALDR 224
+ ++ CK+G E+ + L K ++ + P I LC+ +G +
Sbjct: 298 LSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITF 355
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVV-------------------------- 258
A LG +S E + ++ VI LCR V
Sbjct: 356 AQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVH 415
Query: 259 ---------ESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
E++E L M + GL+PD +TY II GY K GM+ +A IL +A
Sbjct: 416 ACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEA 468
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
+ + + S R V++A + M P +N +++ + G ++A +V M+
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 94 DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+G+ DVYTYT+ I + + G A +L + V Y ++ G+ + + D
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYD 494
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE-SEKLLNKVLKRGVSPNLFTYNIF 212
A +L +EM + P+ +NKL+ C K E +E L ++ ++G+ N +
Sbjct: 495 EALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS---- 550
Query: 213 IQGLCR 218
QGL R
Sbjct: 551 -QGLIR 555
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 5/218 (2%)
Query: 95 KGVGSDVYTYTIRIKSFCRTGRPHAALRLL---RNMSVFGCSFNAVAYCTVVAGFYEFGD 151
K D YT +K + + GR R+L R + V Y TVV+ F G
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK-RGVSPNLFTYN 210
D AR++ EM + + T+N L+ G CK+ + +E LL ++ + G+ P++ +YN
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYN 527
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I I G A+ F + G++P ++Y T++ + + +M+ND
Sbjct: 528 IIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMND 587
Query: 271 G-LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
++ D +N +++GYC+ G+++DA R++ GF
Sbjct: 588 PRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 32/279 (11%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFE---RMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
Y M+ Y + G+V + + E R D N P +Y +++ V G ++A +V
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV-FGCSFNAVAYCTVVAGFYEF 149
M GV ++ TY + +K +C+ + A LLR M+ G + V+Y ++ G
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 150 GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR-----GVSP 204
D A F+EM R + P ++ L+ G KL N+V V
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSG----QPKLANRVFDEMMNDPRVKV 592
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSR-------- 256
+L +N+ ++G CR G ++ A + + G P+V TY ++ G+ + +
Sbjct: 593 DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLW 652
Query: 257 -------VVESEECLHKMVNDG----LQPDEFTYNTIID 284
V+ +E +D L+PDE +T+ D
Sbjct: 653 KEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLAD 691
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK---RGVSPNLFTYNIFIQGLCR 218
+L + PD + L+ G K G V ++ ++L + + R P+ TY +
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 219 EGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQPDEF 277
G +DRA L ++R G+ + +TYN ++ G C++ ++ +E+ L +M D G++PD
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 278 TYNTIIDG 285
+YN IIDG
Sbjct: 525 SYNIIIDG 532
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 2/213 (0%)
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
R D+ D TYT + +F G A ++L M+ G N + Y ++ G+ +
Sbjct: 442 RQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQL 501
Query: 151 DRDLARELFDEMLERS-LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTY 209
D A +L EM E + + PDV ++N ++ G + N++ RG++P +Y
Sbjct: 502 QIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISY 561
Query: 210 NIFIQGLCREGALDRA-VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV 268
++ G A VF ++ + D++ +N ++ G CR + +++ + +M
Sbjct: 562 TTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMK 621
Query: 269 NDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+G P+ TY ++ +G + DA + K+
Sbjct: 622 ENGFYPNVATYGSLANGVSQARKPGDALLLWKE 654
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 108/279 (38%), Gaps = 41/279 (14%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P ++NA++N G ++ K++ M + DV TY + IK R GR + +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE--RSLCPDVATFNKLVHG- 180
L + G ++VA + FGD A + M E R LC + N
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353
Query: 181 --------------------------LCKKGFVPESEKLLN---------KVLKRGVSPN 205
+ ++G V +KLL +L + +P+
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPD 413
Query: 206 LFTYNIFIQGLCREGALDRAVVFLGSVSRE---GMSPDVVTYNTVICGLCRKSRVVESEE 262
Y ++G + G + L ++ R+ PD VTY TV+ + + +
Sbjct: 414 SRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQ 473
Query: 263 CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
L +M G+ + TYN ++ GYCK+ + A +L++
Sbjct: 474 VLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLRE 512
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 142/325 (43%), Gaps = 46/325 (14%)
Query: 22 RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNIL----- 76
R +E N++ +++YG ++A ++FE M Y P +YN ++ IL
Sbjct: 503 RTVIEYNVM-------IKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADM 555
Query: 77 ------------------------------VEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
V+ G N A +VY M + + DV Y +
Sbjct: 556 PHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGV 615
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE-- 164
I +F TG A+ + M G N+V Y +++ + + G D A ++ ++L+
Sbjct: 616 LINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSC 675
Query: 165 -RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
++ PDV T N +++ ++ V ++E + + + +RG N FT+ + + + G +
Sbjct: 676 NKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFE 734
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
A + + D ++YN+V+ R E+ E +MV+ G+QPD+ T+ ++
Sbjct: 735 EATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLG 794
Query: 284 DGYCKKGMVQDANRILKDAVFKGFK 308
K GM + A R +++ K K
Sbjct: 795 TILMKLGMSKKAVRKIEEIRKKEIK 819
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 5/282 (1%)
Query: 22 RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGY 81
R + N+ Y + +YG G + EA VF N + +V YN ++
Sbjct: 462 RFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKS 520
Query: 82 FNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCT 141
+A +++ M GV D TY ++ PH L M G + + YC
Sbjct: 521 CEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCA 580
Query: 142 VVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG 201
V++ F + G ++A E++ EM+E ++ PDV + L++ G V ++ + + + G
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Query: 202 VSPNLFTYNIFIQGLCREGALDRAVVF---LGSVSREGMSPDVVTYNTVICGLCRKSRVV 258
+ N YN I+ + G LD A L + PDV T N +I +S V
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVR 700
Query: 259 ESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
++E M G + +EFT+ ++ Y K G ++A +I K
Sbjct: 701 KAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAK 741
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 43/295 (14%)
Query: 48 QEAVDVFERMDLYNC-EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
+ AV++FE C E +V YN ++ IL + + ++ M KG+ TY
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFG--------------------------------CSF 134
I + + G AL L MS G C
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 135 N---------AVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKG 185
N + Y T++ + + G A E F MLE + P TFN ++H G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 186 FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYN 245
+ E L+ K +K +P+ TYNI I + ++RA + + +G+ PD V+Y
Sbjct: 348 QLGEVTSLM-KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYR 406
Query: 246 TVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
T++ + V E+E + +M +D ++ DE+T + + Y + M++ + K
Sbjct: 407 TLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFK 461
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 130/368 (35%), Gaps = 74/368 (20%)
Query: 1 MLQKLGHHREFNQMENLL-----SEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFE 55
+LQ REF + E E +A L Y + +YG+ G+++EA + F+
Sbjct: 263 VLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFK 322
Query: 56 RMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTG 115
RM P+ ++N +++I G + + MK D TY I I +
Sbjct: 323 RMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNN 381
Query: 116 RPHAALRLLRNMSVFGCSFNAVAYCTVVAGFY-----------------------EFGDR 152
A + M G + V+Y T++ F E+
Sbjct: 382 DIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQS 441
Query: 153 DLARELFD-EMLERSLCP----------DVATFNKLVHGLCKKGFVPESEK--------- 192
L R + EMLE+S ++ + ++G++ E+E+
Sbjct: 442 ALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN 501
Query: 193 -------------------------LLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVV 227
L ++ GV+P+ TYN +Q L +
Sbjct: 502 KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRC 561
Query: 228 FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
+L + G D + Y VI + ++ +EE +MV ++PD Y +I+ +
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA 621
Query: 288 KKGMVQDA 295
G VQ A
Sbjct: 622 DTGNVQQA 629
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
CK +V + L ++++++G+ P TY I + G A+ +LG +S+ GM PD
Sbjct: 201 CKWRYV---QSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDE 257
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE------FTYNTIIDGYCKKGMVQDA 295
VT V+ + ++EE K D + D +TYNT+ID Y K G +++A
Sbjct: 258 VTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEA 317
Query: 296 NRILKDAVFKGF 307
+ K + +G
Sbjct: 318 SETFKRMLEEGI 329
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCE----PSVHSYNAIMNILVEFGYFNQAHKVY 89
Y ++ Y + G + EA ++ ++ L +C P V++ N ++N+ E +A ++
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYRKL-LQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIF 706
Query: 90 MRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF 149
MK +G ++ +T+ + + + + GR A ++ + M + ++Y +V+ F
Sbjct: 707 DSMKQRGEANE-FTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALD 765
Query: 150 GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF----VPESEKLLNKVLKRGVSPN 205
G A E F EM+ + PD +TF L L K G V + E++ K +KRG+
Sbjct: 766 GRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELW 825
Query: 206 LFTYNIFI 213
+ T + +
Sbjct: 826 ISTLSSLV 833
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 82/140 (58%)
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
ML S+ P T+N ++ G CK+ V +++++L+ + +G SP++ T++ I G C+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
+D + + R G+ + VTY T+I G C+ + +++ L++M++ G+ PD T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 282 IIDGYCKKGMVQDANRILKD 301
++ G C K ++ A IL+D
Sbjct: 121 MLAGLCSKKELRKAFAILED 140
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 72/132 (54%)
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
TY I FC+ R A R+L +M+ GCS + V + T++ G+ + D E+F EM
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
R + + T+ L+HG C+ G + ++ LLN+++ GV+P+ T++ + GLC + L
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 223 DRAVVFLGSVSR 234
+A L + +
Sbjct: 132 RKAFAILEDLQK 143
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 135 NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL 194
+ Y +++ GF + D A+ + D M + PDV TF+ L++G CK V ++
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 195 NKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRK 254
++ +RG+ N TY I G C+ G LD A L + G++PD +T++ ++ GLC K
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 255 SRV 257
+
Sbjct: 129 KEL 131
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 197 VLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSR 256
+L+ + P TYN I G C++ +D A L S++ +G SPDVVT++T+I G C+ R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 257 VVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
V E +M G+ + TY T+I G+C+ G + A +L + + G
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 110
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P+ +YN++++ + + A ++ M KG DV T++ I +C+ R + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
M G N V Y T++ GF + GD D A++L +EM+ + PD TF+ ++ GLC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 184 KGFVPESEKLLNKVLK 199
K + ++ +L + K
Sbjct: 128 KKELRKAFAILEDLQK 143
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 9/300 (3%)
Query: 5 LGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
L + F + LL + E V A+ YGR + ++ F ++ Y
Sbjct: 85 LAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPR 144
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRM-KDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
+V S NA++ + + +A++VY+ M K G+ D+ TY I+ C +G ++ +
Sbjct: 145 TVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSI 204
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
+ M A ++ ++ GFY+ D R++ M E + VAT+N ++ LCK
Sbjct: 205 VAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCK 264
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
+ E++ L++ V+ + PN TY++ I G C E LD A+ + G PD
Sbjct: 265 RKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSEC 324
Query: 244 YNTVICGLCR----KSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
Y T+I LC+ ++ ++ E + K P +++G + V +A ++
Sbjct: 325 YFTLIHCLCKGGDFETALILCRESMEK----NWVPSFSVMKWLVNGLASRSKVDEAKELI 380
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 92/177 (51%), Gaps = 6/177 (3%)
Query: 133 SFNAVAYCTVVAGFYEFGDRDLARELFDEMLER-SLCPDVATFNKLVHGLCKKGFVPESE 191
S NA+ + ++A Y+ +R ++ EM + + PD+ T+N+++ LC+ G S
Sbjct: 148 SLNALLFACLMAKDYKEANR-----VYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSY 202
Query: 192 KLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGL 251
++ ++ ++ + P ++ + I G +E D + + G+ V TYN +I L
Sbjct: 203 SIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCL 262
Query: 252 CRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
C++ + E++ + +++ ++P+ TY+ +I G+C + + +A + + V G+K
Sbjct: 263 CKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYK 319
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 5/191 (2%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
+P+ S+ +++ + F++ KV M + GV V TY I I+ C+ + A
Sbjct: 214 KPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKA 273
Query: 123 LLRNMSVFGCSF--NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
L+ V C N+V Y ++ GF + D A LF+ M+ PD + L+H
Sbjct: 274 LIDG--VMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHC 331
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
LCK G + L + +++ P+ + GL +D A + V +E + +
Sbjct: 332 LCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIA-VVKEKFTRN 390
Query: 241 VVTYNTVICGL 251
V +N V L
Sbjct: 391 VDLWNEVEAAL 401
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 136/286 (47%), Gaps = 12/286 (4%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
++ KLG R FN ++++L++ R++ L + ++ Y ++ + F +M +
Sbjct: 90 LILKLGRGRYFNLIDDVLAKHRSS-GYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEF 148
Query: 61 NCEPSVHSYNAIMNILVEF-GYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
N P N I+++LV GY +A +++ + GV + +Y + +++FC
Sbjct: 149 NFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSI 208
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A +L M + +Y ++ GF G + A EL D+ML + PD L+
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIG 264
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
GLC +G E +K L +++ +G SP+ N ++G C G ++ A + V + G +
Sbjct: 265 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT-IID 284
T+ VI +C + ESE+ K+ + +E T +T I+D
Sbjct: 325 HSDTWEMVIPLICNED---ESEKI--KLFLEDAVKEEITGDTRIVD 365
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 12/235 (5%)
Query: 67 HSYNAIMNILVEFG---YFNQAHKVYMRMKDKG--VGSDVYTYTIRIKSFCRTGRPHAAL 121
HS ++ + ++++ G YFN V + + G + +++TY I++ + P L
Sbjct: 82 HSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKV--YAEAKLPEKVL 139
Query: 122 RLLRNMSVFGCSFNAVAYCTVVAGFYEF-GDRDLARELFDEMLERSLCPDVATFNKLVHG 180
M F + ++ G A ELF + P+ ++N L+
Sbjct: 140 STFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQA 199
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
C + + +L K+L+R V P++ +Y I IQG CR+G ++ A+ L + +G PD
Sbjct: 200 FCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD 259
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
T+I GLC + E ++ L +M++ G P N ++ G+C G V++A
Sbjct: 260 ----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 159 FDEMLERSLCPDVATFNKLVHGLCK-KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
F +MLE + P N+++ L +G++ ++ +L GV PN +YN+ +Q C
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
L A G + + PDV +Y +I G CRK +V + E L M+N G PD
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD-- 259
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
T+I G C +GM + + L++ + KGF
Sbjct: 260 --RTLIGGLCDQGMFDEGKKYLEEMISKGF 287
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 3/274 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y ++ + G V EA V ++ P + N +++ G F +A KV+ +
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSL 343
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ + + D YT+ + S C +G+ R+ + G F+ V + F + G
Sbjct: 344 EKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYN 400
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A ++ M + D T+ + LC+ G + K+ ++K + ++
Sbjct: 401 SYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAI 460
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
I L G + AV E DVV+Y I GL R R+ E+ M G+
Sbjct: 461 IDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGI 520
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
P+ TY TII G CK+ + +IL++ + +G
Sbjct: 521 YPNRRTYRTIISGLCKEKETEKVRKILRECIQEG 554
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 3/248 (1%)
Query: 53 VFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFC 112
V +RM P+ + I+ + G ++A +V M G+ V +++ + F
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 113 RTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVA 172
R+G P A+ L M GCS N V Y +++ GF + G D A + ++ L PD+
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 173 TFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV 232
N ++H + G E+ K+ + KR + P+ +T+ + LC G D +
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI 378
Query: 233 SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
G D+VT N + + + + L M D +TY + C+ G
Sbjct: 379 ---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAP 435
Query: 293 QDANRILK 300
+ A ++ K
Sbjct: 436 RAAIKMYK 443
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 113/251 (45%), Gaps = 9/251 (3%)
Query: 53 VFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFC 112
+ ER+ + CE + ++ I +++A +VY M G + + +
Sbjct: 95 IIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNF 154
Query: 113 RTGRPHAALRLLRNMSVFGCSF-NAVAYCTVVAGFYEFGDR-DLA--RELFDEMLERSLC 168
+ + AL + G F N ++ ++ F G R DL + + M+
Sbjct: 155 KLNVVNGALEIFE-----GIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFY 209
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
P+ F +++ C+ G V E+ +++ ++ G+S ++ +++ + G R G +AV
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
+ + G SP++VTY ++I G V E+ L K+ ++GL PD N +I Y +
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Query: 289 KGMVQDANRIL 299
G ++A ++
Sbjct: 330 LGRFEEARKVF 340
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 98/224 (43%), Gaps = 7/224 (3%)
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
++ R+K G + + ++ F R A+ + MS FG N A ++
Sbjct: 94 RIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVN 153
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE---SEKLLNKVLKRGVS 203
++ + A E+F+ + R+ +F+ + C +G + + +L +++ G
Sbjct: 154 FKLNVVNGALEIFEGIRFRNF----FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFY 209
Query: 204 PNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEEC 263
PN + ++ CR G + A +G + G+S V ++ ++ G R ++ +
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 264 LHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+KM+ G P+ TY ++I G+ GMV +A +L +G
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGL 313
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 8/306 (2%)
Query: 6 GHHREFNQMENLLSEMRATLENNLL-EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
G ++F QM +L EMR + L+ + + + YGR G A+ F+ M P
Sbjct: 689 GCGKDFKQMRSLFYEMRR--QGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIP 746
Query: 65 SVHSYNAIMNILVEFGYFN--QAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
S ++ ++ +L E N +A + + M G D + C G A
Sbjct: 747 SSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKS 806
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLA-RELFDEMLERSLCPDVATFNKLVHGL 181
L ++ G VAY + G + A EL ERSL D T+ +VHGL
Sbjct: 807 CLDSLGKIGFPVT-VAYSIYIRALCRIGKLEEALSELASFEGERSLL-DQYTYGSIVHGL 864
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
++G + ++ +N + + G P + Y I +E L++ + + E P V
Sbjct: 865 LQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSV 924
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
VTY +ICG +V E+ M G PD TY+ I+ C+ +DA ++L +
Sbjct: 925 VTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSE 984
Query: 302 AVFKGF 307
+ KG
Sbjct: 985 MLDKGI 990
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 139/309 (44%), Gaps = 4/309 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
ML G R + ++ L+SEM + + + + YG+ K+ + + VFE+M
Sbjct: 195 MLSIAGEARNLDMVDELVSEMEKNGCDKDIR-TWTILISVYGKAKKIGKGLLVFEKMRKS 253
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
E +YN ++ L G + A + Y M +KG+ + TY + + ++ +
Sbjct: 254 GFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVV 313
Query: 121 LRLLRNMSVFGCSFNA-VAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
+ +M V C + A+ ++ F G A EL E+ + +C D F LV
Sbjct: 314 QSIADDM-VRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVK 372
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
GLC+ + ++ ++++ ++KR + Y I I G R+ + +A+ + + G P
Sbjct: 373 GLCRANRMVDALEIVD-IMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPP 431
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
V TY ++ L + + + ++M+ +G++PD ++ G+ + V +A ++
Sbjct: 432 RVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVF 491
Query: 300 KDAVFKGFK 308
KG K
Sbjct: 492 SSMEEKGIK 500
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY +R+ R GK++EA+ + ++Y +I++ L++ G +A M
Sbjct: 821 AYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSM 880
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K+ G V+ YT I F + + L + M C + V Y ++ G+ G
Sbjct: 881 KEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKV 940
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
+ A F M ER PD T++K ++ LC+ ++ KLL+++L +G++P+ +
Sbjct: 941 EEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTV 1000
Query: 213 IQGLCREGALDRAVVFL 229
GL REG D A + L
Sbjct: 1001 FYGLNREGKHDLARIAL 1017
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
YN +++I E + ++ M+ G D+ T+TI I + + + L + M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G +A AY ++ G DLA E + EM+E+ + + T+ L+ + K V
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
+ + + +++ + ++ C G + A+ + + + M D + ++
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
GLCR +R+V++ E + M L D Y II GY ++ V A
Sbjct: 372 KGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKA 417
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 38/216 (17%)
Query: 49 EAVDVFERM--DLYN-CEPSVH-SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
E VDV + + D+ CE S H ++ ++ G +A ++ +K+K + D +
Sbjct: 308 EKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYF 367
Query: 105 TIRIKSFCRTGRPHAAL--------RLLRNMSVFGC----------------SFNAV--- 137
I +K CR R AL R L + +V+G F +
Sbjct: 368 EILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKS 427
Query: 138 -------AYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
Y ++ ++ + LF+EM+E + PD +V G + V E+
Sbjct: 428 GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEA 487
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
K+ + + ++G+ P +Y+IF++ LCR D +
Sbjct: 488 WKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEII 523
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 137/330 (41%), Gaps = 40/330 (12%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+++ LG ++F + +L+ +M+A + L + + R Y R KV+EA+ F +M+ +
Sbjct: 134 LIESLGKIKQFKLIWSLVDDMKA--KKLLSKETFALISRRYARARKVKEAIGAFHKMEEF 191
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK--------------------------- 93
+ +N +++ L + A KV+ +MK
Sbjct: 192 GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRV 251
Query: 94 --------DKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAG 145
D+G DV Y I I + C+ + A+R M C + +C+++ G
Sbjct: 252 DEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLING 311
Query: 146 FYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
+ A E F+ + T+N LV C + ++ K ++++ +GV PN
Sbjct: 312 LGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371
Query: 206 LFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLH 265
TY+I + L R A ++S E P V TY ++ C K R+ + +
Sbjct: 372 ARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWD 428
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+M G+ P ++++I C + + +A
Sbjct: 429 EMKGKGVLPGMHMFSSLITALCHENKLDEA 458
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
AY + ++ + K +EA+ F M+ NC+PS H + +++N L N A + + R
Sbjct: 269 AYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERS 328
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K G + TY + ++C + R A + + M + G NA Y ++
Sbjct: 329 KSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRS 388
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A E++ M S P V+T+ +V C K + + K+ +++ +GV P + ++
Sbjct: 389 KEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSL 445
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSP 239
I LC E LD A + + G+ P
Sbjct: 446 ITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 132/296 (44%), Gaps = 8/296 (2%)
Query: 12 NQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD-LYNCEPSVHSYN 70
+++E LL+E L L+E E ++ G + A+ VF+ + + + +YN
Sbjct: 79 SKVETLLNEASVKLSPALIE----EVLKKLSNAGVL--ALSVFKWAENQKGFKHTTSNYN 132
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
A++ L + F + MK K + S T+ + + + R + A+ M F
Sbjct: 133 ALIESLGKIKQFKLIWSLVDDMKAKKLLSK-ETFALISRRYARARKVKEAIGAFHKMEEF 191
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
G + + ++ + + A+++FD+M ++ PD+ ++ L+ G ++ +
Sbjct: 192 GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRV 251
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICG 250
+++ ++ G P++ Y I I C+ + A+ F + + P + ++I G
Sbjct: 252 DEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLING 311
Query: 251 LCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
L + ++ ++ E + + G + TYN ++ YC ++DA + + + KG
Sbjct: 312 LGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 136/305 (44%), Gaps = 2/305 (0%)
Query: 5 LGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNC 62
L R+F +++L EM ++ +L AY + ++ + K++ A F++ C
Sbjct: 215 LNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGC 274
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
+ +YN +M + + G +A ++Y M+ D TY + I S ++GR AA +
Sbjct: 275 KIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFK 334
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
L + M + + ++V + G D + +++ EM P F L+
Sbjct: 335 LFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYA 394
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
K G + + +L +++ K G PN Y + I+ + G L+ A+ + + G P
Sbjct: 395 KAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPS 454
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
TY+ ++ +V + + + M N GL+P +Y +++ K +V A +IL +
Sbjct: 455 TYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Query: 303 VFKGF 307
G+
Sbjct: 515 KAMGY 519
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 127/283 (44%), Gaps = 2/283 (0%)
Query: 27 NNLLEGAYVE-AMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQA 85
++LL+G+ E + S + G++ A +F++M PS ++++++ + + G + +
Sbjct: 308 DSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTS 367
Query: 86 HKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAG 145
KVYM M+ G + I S+ + G+ ALRL M G N Y ++
Sbjct: 368 MKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIES 427
Query: 146 FYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
+ G ++A +F +M + P +T++ L+ G V + K+ N + G+ P
Sbjct: 428 HAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPG 487
Query: 206 LFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLH 265
L +Y + L + +D A L + G S DV + ++ + + + V + + L
Sbjct: 488 LSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLALKWLR 546
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
M + G++ + F + + K G+ A +L+ V K
Sbjct: 547 FMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGK 589
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 98/244 (40%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
S ++YN ++ L + A + + ++ G D TY + F G P+ A +
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
+M + Y ++ + G D A +LF +M ER L P + F+ LV + K
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
G + S K+ ++ G P+ + I + G LD A+ + + G P+ Y
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVF 304
+I + ++ + M G P TY+ +++ + G V A +I
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 305 KGFK 308
G +
Sbjct: 482 AGLR 485
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 104/227 (45%)
Query: 49 EAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRI 108
+A +++E M+ + +Y I+ L + G + A K++ +MK++ + ++ +
Sbjct: 296 KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV 355
Query: 109 KSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC 168
S + GR ++++ M FG +A + +++ + + G D A L+DEM +
Sbjct: 356 DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFR 415
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
P+ + ++ K G + + + + K G P TY+ ++ G +D A+
Sbjct: 416 PNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
S++ G+ P + +Y +++ L K V + + L +M G D
Sbjct: 476 YNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 149/334 (44%), Gaps = 38/334 (11%)
Query: 1 MLQKLGHHREFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
+L+ LG +++++ EM L N G V+ YG+ G V+EA+ + M
Sbjct: 151 VLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDV---YGKAGLVKEALLWIKHMG 207
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
P + ++ + G F++A + + V D+ + I F + G
Sbjct: 208 QRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS----IDDFPKNGSAQ 263
Query: 119 AALRLLRNMSV----------------FGCSFNAV--------AYCTVVAGFYEFGDRDL 154
+ + L + +S+ F ++ + T++ + + G +
Sbjct: 264 SPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLND 323
Query: 155 ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQ 214
A LF EML+ + D TFN ++H G + E+E LL K+ ++G+SP+ TYNI +
Sbjct: 324 AANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLS 383
Query: 215 GLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQP 274
G ++ A+ + + + G+ PD VT+ V+ LC++ V E E + +M + ++
Sbjct: 384 LHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRI 443
Query: 275 DEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
DE + I+ Y +G+V A A+F+ F+
Sbjct: 444 DEHSVPVIMQMYVNEGLVVQAK-----ALFERFQ 472
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 2/257 (0%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
V EA + M C+P +Y A++ V G + A +Y M+ GV + Y
Sbjct: 566 VDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGS 625
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I F +G A++ R M G N + +++ + + G + AR ++D+M +
Sbjct: 626 LINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSE 685
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
PDVA N ++ G V E+E + N + ++G ++ ++ + G LD A+
Sbjct: 686 GGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAI 744
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM-VNDGLQPDEFTYNTIIDG 285
+ G+ D ++N V+ ++ E E H+M V L D T+ T+
Sbjct: 745 EVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTL 804
Query: 286 YCKKGMVQDANRILKDA 302
K G+ +A L+ A
Sbjct: 805 LKKGGVPSEAVSQLQTA 821
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 40/269 (14%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV-YMRMKDKG 96
M+ Y G V +A +FER L +C S + A++++ E G + +A V Y + G
Sbjct: 452 MQMYVNEGLVVQAKALFERFQL-DCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSG 510
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
+DV Y + IK++ + AL L + M G
Sbjct: 511 QRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT------------------------ 546
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
PD T+N L L V E++++L ++L G P TY I
Sbjct: 547 -----------WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY 595
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
R G L AV ++ + G+ P+ V Y ++I G V E+ + M G+Q +
Sbjct: 596 VRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNH 655
Query: 277 FTYNTIIDGYCKKGMVQDANRI---LKDA 302
++I Y K G +++A R+ +KD+
Sbjct: 656 IVLTSLIKAYSKVGCLEEARRVYDKMKDS 684
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
++N ++++ + G N A ++ M GV D T+ I + G A LL+ M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
G S + Y +++ + GD + A E + ++ + L PD T ++H LC++ V
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA---------------------- 225
E E ++ ++ + + + + + +Q EG + +A
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 226 -------------VVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK-MVNDG 271
VF G + G DV+ YN +I K+++ E L K M N G
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYG-KAKLHEKALSLFKGMKNQG 545
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
PDE TYN++ +V +A RIL + + G K
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCK 582
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 28/274 (10%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+++Y + G ++EA V+++M P V + N+++++ + G ++A ++ +++KG
Sbjct: 662 IKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT 721
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
DV ++ + + G A+ + M G + ++ V+A + G E
Sbjct: 722 -CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCE 780
Query: 158 LFDEML-ERSLCPDVATFNKLVHGLCKKGFVP------------ESEKLLNKVLKRGVSP 204
LF EML ER L D TF K + L KKG VP E++ L + +
Sbjct: 781 LFHEMLVERKLLLDWGTF-KTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFS 839
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL 264
+ Y ++ C+E + G + RE + YN VI + + +
Sbjct: 840 AMGLYAYALES-CQE-------LTSGEIPREHFA-----YNAVIYTYSASGDIDMALKAY 886
Query: 265 HKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
+M GL+PD T ++ Y K GMV+ R+
Sbjct: 887 MRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRV 920
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 118/258 (45%), Gaps = 8/258 (3%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y R GK++ + VF M + ++ S+N+I++ + GY + A + M+ G+ D
Sbjct: 134 YSRNGKLELSRKVFNSMK----DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD 189
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+ T+ + + G A+ +L+ M + G + + +++ E G L + +
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHG 249
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+L L DV L+ K G++P + + + + + N+ +N + GL
Sbjct: 250 YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYAC 305
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
L A + + +EG+ PD +T+N++ G + ++ + + KM G+ P+ ++
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 281 TIIDGYCKKGMVQDANRI 298
I G K G ++A ++
Sbjct: 366 AIFSGCSKNGNFRNALKV 383
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 121/257 (47%), Gaps = 16/257 (6%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
++ + SY + G V +A+ + + M++ +P + ++N++++ G A V RM
Sbjct: 157 SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAAL------RLLRNMSVFGCSFNAVAYCTVVAGF 146
+ G+ + + +++ G H L +LRN ++ T++ +
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPG--HLKLGKAIHGYILRNQ----LWYDVYVETTLIDMY 270
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
+ G AR +FD M + ++ +N LV GL + ++E L+ ++ K G+ P+
Sbjct: 271 IKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDA 326
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
T+N G G ++A+ +G + +G++P+VV++ + G + + + K
Sbjct: 327 ITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIK 386
Query: 267 MVNDGLQPDEFTYNTII 283
M +G+ P+ T +T++
Sbjct: 387 MQEEGVGPNAATMSTLL 403
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 125/302 (41%), Gaps = 49/302 (16%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVE-------FGYFNQAHKVYMRMKDK 95
R G ++AV++F M +Y++ M L++ F Q H +R+
Sbjct: 66 RSGNWEKAVELFREMQF----SGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRL--- 118
Query: 96 GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLA 155
G+ S+V I + R G+ + ++ +M N ++ ++++ + + G D A
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK----DRNLSSWNSILSSYTKLGYVDDA 174
Query: 156 RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
L DEM L PD+ T+N L+ G KG ++ +L ++ G+ P+ + + +Q
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 216 LCREGALDRAVVFLGSVSREGMSPDV-------------------------------VTY 244
+ G L G + R + DV V +
Sbjct: 235 VAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAW 294
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVF 304
N+++ GL + ++E + +M +G++PD T+N++ GY G + A ++
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 305 KG 306
KG
Sbjct: 355 KG 356
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 122/275 (44%), Gaps = 10/275 (3%)
Query: 25 LENNLLEGAYVEA--MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYF 82
L N L YVE + Y + G + A VF+ MD N + ++N++++ L
Sbjct: 252 LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN----IVAWNSLVSGLSYACLL 307
Query: 83 NQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTV 142
A + +RM+ +G+ D T+ + G+P AL ++ M G + N V++ +
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 143 VAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGV 202
+G + G+ A ++F +M E + P+ AT + L+ L + +++ L++ +
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 203 SPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE 262
+ + + + G L A+ + + ++ ++N ++ G R E
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRGEEGIA 483
Query: 263 CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
M+ G++PD T+ +++ G+VQ+ +
Sbjct: 484 AFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK 518
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 38/291 (13%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y GK ++A+DV +M P+V S+ AI + + G F A KV+++M+++GVG +
Sbjct: 336 YATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPN 395
Query: 101 VYTYTIRIK-----SFCRTGRPHAALRLLRNM-----------SVFGCSFNA-------- 136
T + +K S +G+ L +N+ ++G S +
Sbjct: 396 AATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFW 455
Query: 137 -------VAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
++ ++ G+ FG + F MLE + PD TF ++ G V E
Sbjct: 456 GIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQE 515
Query: 190 SEKLLNKVLKR-GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
K + + R G+ P + + + L R G LD A F+ ++S + PD + +
Sbjct: 516 GWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS---LKPDATIWGAFL 572
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQP-DEFTYNTIIDGYCKKGMVQDANRI 298
C+ R +E E K + L+P + Y +I+ Y +D RI
Sbjct: 573 SS-CKIHRDLELAEIAWKRLQV-LEPHNSANYMMMINLYSNLNRWEDVERI 621
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 122/256 (47%), Gaps = 9/256 (3%)
Query: 44 FGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK-GVGSDVY 102
FG +VD ++M + +P+ ++N++M G +++ M+++ G +VY
Sbjct: 224 FGLDDVSVDEAKKM-IGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY 282
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
+Y + ++++C G A ++ M V G ++ VAY T++ G + A+ELF +M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC--REG 220
+ + T+ LV+G CK G V + ++ ++G + T ++GLC R+G
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402
Query: 221 A-LDRAVVFLGSVSREGM-SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFT 278
+ A + RE M P Y ++ LC ++ + +MV G +P + T
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQET 462
Query: 279 YNTIIDGYCKKGMVQD 294
Y IDGY G+V D
Sbjct: 463 YRAFIDGY---GIVGD 475
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 5/218 (2%)
Query: 38 MRSYGRFGKVQEAVDVFERMDL-YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG 96
M S+ R G+ + ++ M+ C P+V+SYN +M G ++A KV+ MK +G
Sbjct: 252 MVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRG 311
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
V D+ Y I C A L R+M + G + Y +V G+ + GD D
Sbjct: 312 VVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGL 371
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCK----KGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
++ EM + D T LV GLC + V ++ + + V + P+ Y +
Sbjct: 372 VVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELL 431
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICG 250
++ LC +G +DRA+ + +G P TY I G
Sbjct: 432 VKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 5/217 (2%)
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV-FGCSFNAVAYCTVVAGFYEFGDRDLA 155
+ + T+ + SF R G R+ R M GCS N +Y ++ + G A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 156 RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
++++EM R + D+ +N ++ GLC V ++++L + +G+ TY + G
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRK---SRVVESEECLHKMVNDGL 272
C+ G +D +V + R+G D +T ++ GLC RVVE+ + + V + +
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAM 420
Query: 273 -QPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
P Y ++ C+ G + A I + V KGFK
Sbjct: 421 FYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFK 457
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Query: 149 FGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR-GVSPNLF 207
FG D++ + +M+ + + P+ TFN ++ ++G E++ ++ + G SPN++
Sbjct: 224 FGLDDVSVDEAKKMIGK-IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY 282
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
+YN+ ++ C G + A + G+ D+V YNT+I GLC VV+++E M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 268 VNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
G++ TY +++GYCK G V + ++ KGF+
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFE 383
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 116/266 (43%), Gaps = 4/266 (1%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
YG+ V+EA +F + + EP+V SYN I+ + E F +A ++ M+ K + +
Sbjct: 340 YGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQN 399
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
V TY IK + +T A L++ M G NA+ Y T+++ + + G D A LF
Sbjct: 400 VVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQ 459
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
++ + D + ++ + G + +++LL+++ P+ I L + G
Sbjct: 460 KLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL----KLPDNIPRETAITILAKAG 515
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
+ A G D+ + +I R R V E KM G PD
Sbjct: 516 RTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIA 575
Query: 281 TIIDGYCKKGMVQDANRILKDAVFKG 306
+++ Y K+ + A+ + ++ +G
Sbjct: 576 MVLNAYGKQREFEKADTVYREMQEEG 601
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 137/297 (46%), Gaps = 5/297 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEA--MRSYGRFGKVQEAVDVFERMD 58
+L+ + ++F+ L EMR + L Y + + S+G+ G A+ ++M+
Sbjct: 161 VLRNVLRAKQFDIAHGLFDEMR---QRALAPDRYTYSTLITSFGKEGMFDSALSWLQKME 217
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
+ Y+ ++ + +++A ++ R+K G+ D+ Y I + +
Sbjct: 218 QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFR 277
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A L++ M+ G N V+Y T+++ + E A +F EM E + D+ T N ++
Sbjct: 278 EARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 337
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
+ V E+++L + K + PN+ +YN ++ A+ + R+ +
Sbjct: 338 DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE 397
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+VVTYNT+I + ++ + +M + G++P+ TY+TII + K G + A
Sbjct: 398 QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 103/232 (44%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
PSV +YN ++ ++ F+ AH ++ M+ + + D YTY+ I SF + G +AL
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
L+ M S + V Y ++ D A +F + + PD+ +N +++ K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
E+ L+ ++ + GV PN +Y+ + A+ + + D+ T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
N +I + V E++ + ++P+ +YNTI+ Y + + +A
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEA 384
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
E P V +N ++ + + + L +++ +R ++P+ +TY+ I +EG D
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVI---CGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
A+ +L + ++ +S D+V Y+ +I LC S+ + ++ G+ PD YN
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAI---SIFSRLKRSGITPDLVAYN 264
Query: 281 TIIDGYCKKGMVQDANRILKD 301
++I+ Y K + ++A ++K+
Sbjct: 265 SMINVYGKAKLFREARLLIKE 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 97/251 (38%), Gaps = 5/251 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y +R YG EA+ +F M + E +V +YN ++ I + +A + M
Sbjct: 367 SYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEM 426
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ +G+ + TY+ I + + G+ A L + + G + V Y T++ + G
Sbjct: 427 QSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLM 486
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
A+ L E+ PD + L K G E+ + + + G ++ +
Sbjct: 487 GHAKRLLHEL----KLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCM 542
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG- 271
I R + + G PD V+ ++ +++ +M +G
Sbjct: 543 INLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGC 602
Query: 272 LQPDEFTYNTI 282
+ PDE + +
Sbjct: 603 VFPDEVHFQML 613
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 113/231 (48%), Gaps = 43/231 (18%)
Query: 99 SDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAREL 158
SD+ + + I S+ RTGR + ALR+ + M +++V+Y +++G+ G+ +LAR+L
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARKL 117
Query: 159 FDEMLERSLCP---------------------------DVATFNKLVHGLCKKGFVPESE 191
FDEM ER L DV ++N ++ G + G V ++
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDAR 177
Query: 192 KLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGL 251
+ +++ ++ N ++N + + ++ A + SRE + +V++N ++ G
Sbjct: 178 SVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFK--SRENWA--LVSWNCLLGGF 229
Query: 252 CRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
+K ++VE+ + M D ++NTII GY + G + +A ++ ++
Sbjct: 230 VKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDES 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 126/285 (44%), Gaps = 20/285 (7%)
Query: 22 RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGY 81
R + N + YV+ R ++ A ++F+ M N V ++N ++ + G
Sbjct: 310 RNEVSWNAMLAGYVQGER-------MEMAKELFDVMPCRN----VSTWNTMITGYAQCGK 358
Query: 82 FNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCT 141
++A ++ +M + D ++ I + ++G ALRL M G N ++ +
Sbjct: 359 ISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 142 VVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG 201
++ + +L ++L +++ N L+ CK G + E+ N + K
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEA----NDLFKEM 470
Query: 202 VSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESE 261
++ ++N I G R G + A+ F S+ REG+ PD T V+ V +
Sbjct: 471 AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 262 ECLHKMVND-GLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
+ + M D G+ P+ Y ++D + G+++DA+ ++K+ F+
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE 575
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 134/297 (45%), Gaps = 39/297 (13%)
Query: 3 QKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNC 62
+ LG RE + ++ E N +L G Y + G V +A VF+RM
Sbjct: 140 RNLGKARELFE---IMPERDVCSWNTMLSG--------YAQNGCVDDARSVFDRMP---- 184
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
E + S+NA+++ V+ +A ++ ++ + S + + F + + A +
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS----WNCLLGGFVKKKKIVEARQ 240
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
+M+V + V++ T++ G+ + G D AR+LFDE S DV T+ +V G
Sbjct: 241 FFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYI 292
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
+ V E+ +L +K+ +R N ++N + G + ++ A + +V
Sbjct: 293 QNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVS 344
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
T+NT+I G + ++ E++ KM + D ++ +I GY + G +A R+
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGHSFEALRLF 397
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 138/320 (43%), Gaps = 58/320 (18%)
Query: 20 EMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEF 79
E A + N L G +V+ K+ EA F+ M++ + V S+N I+ +
Sbjct: 215 ENWALVSWNCLLGGFVKKK-------KIVEARQFFDSMNVRD----VVSWNTIITGYAQS 263
Query: 80 GYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAY 139
G ++A +++ D+ DV+T+T + + + A L M N V++
Sbjct: 264 GKIDEARQLF----DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSW 315
Query: 140 CTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK 199
++AG+ + ++A+ELFD M C +V+T+N ++ G + G + E++ L +K+ K
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 200 R----------GVSPNLFTYN---IFIQGLCREGALDRA-----------VVFL------ 229
R G S + ++ +F+Q G L+R+ VV L
Sbjct: 372 RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 230 -GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
G + + G N ++ C+ + E+ + +M D ++NT+I GY +
Sbjct: 432 HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG----KDIVSWNTMIAGYSR 487
Query: 289 KGMVQDANRILKDAVFKGFK 308
G + A R + +G K
Sbjct: 488 HGFGEVALRFFESMKREGLK 507
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 46/264 (17%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGK---VQEAVDVFERM 57
ML LG +R+F+Q+ LL E + + +L+ ++ + GR K V++ V+ F +
Sbjct: 114 MLYILGRNRKFDQIWELLIETKRK-DRSLISPRTMQVV--LGRVAKLCSVRQTVESFWKF 170
Query: 58 -----DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVY----------------------- 89
D ++ +NA++ L + A VY
Sbjct: 171 KRLVPDFFDTA----CFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKS 226
Query: 90 --------MRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCT 141
MK KG+ DV TY I +C+ A +L+ M + + + Y T
Sbjct: 227 SEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTT 286
Query: 142 VVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG 201
V+ G G D ARE+ EM E PDVA +N + C + +++KL+++++K+G
Sbjct: 287 VIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 202 VSPNLFTYNIFIQGLCREGALDRA 225
+SPN TYN+F + L L R+
Sbjct: 347 LSPNATTYNLFFRVLSLANDLGRS 370
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 6/223 (2%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
+P V +YN+++++ + +A+K+ +M+++ DV TYT I G+P A
Sbjct: 243 KPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKARE 302
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGF---YEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
+L+ M +GC + AY + F GD D +L DEM+++ L P+ T+N
Sbjct: 303 VLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDAD---KLVDEMVKKGLSPNATTYNLFFR 359
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
L + S +L ++L PN + I+ R +D A+ + +G
Sbjct: 360 VLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGS 419
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
+ + ++ LC ++V E+E+CL +MV G +P ++ I
Sbjct: 420 YSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%)
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ L PDV T+N L+ CK + ++ KL++K+ + +P++ TY I GL G D+
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
A L + G PDV YN I C R+ ++++ + +MV GL P+ TYN
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYN 355
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
L+ PD+ TFN L+ G + + +G+ P++ TYN I C++ +
Sbjct: 206 LKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMKG---KGLKPDVVTYNSLIDVYCKDREI 262
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
++A + + E +PDV+TY TVI GL + ++ E L +M G PD YN
Sbjct: 263 EKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAA 322
Query: 283 IDGYCKKGMVQDANRILKDAVFKGF 307
I +C + DA++++ + V KG
Sbjct: 323 IRNFCIARRLGDADKLVDEMVKKGL 347
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
M++ + D Y I I C+ G+ A + N+ + G + Y ++ F
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
A +L+ EM+ R L PD T+N ++HGLCK+ + ++ K VS + T+N
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNT 111
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
I G C+ + + + R G+ +V+TY T+I G + + + +MV++G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+ T+ I+ C + ++ A +L
Sbjct: 172 VYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 134 FNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKL 193
+ Y ++ G + G D A +F +L L PDV T+N ++ + + +EKL
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKL 67
Query: 194 LNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCR 253
++++RG+ P+ TYN I GLC++ L +A +S T+NT+I G C+
Sbjct: 68 YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCK 118
Query: 254 KSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
+RV + +M G+ + TY T+I G+ + G A I ++ V G
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK EA ++F + + +P V +Y N+++ F +A K+Y M +G+ D TY
Sbjct: 28 GKFDEAGNIFTNLLISGLQPDVQTY----NMMIRFSSLGRAEKLYAEMIRRGLVPDTITY 83
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I C+ + A ++ ++ S F N T V LF EM
Sbjct: 84 NSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKD---------GMNLFCEMYR 134
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
R + +V T+ L+HG + G + + +++ GV + T+ + LC L +
Sbjct: 135 RGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRK 194
Query: 225 AVVFLGSVSREGMSPDVVT 243
AV L + + M + VT
Sbjct: 195 AVAML--LQKSSMVSNNVT 211
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 20/230 (8%)
Query: 53 VFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFC 112
+F+ M N + YN I++ L + G F++A ++ + G+ DV TY + I+ F
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 113 RTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVA 172
GR A +L M G + + Y +++ G + LA+ R + +
Sbjct: 60 SLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCK--QNKLAQA-------RKVSKSCS 107
Query: 173 TFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSV 232
TFN L++G CK V + L ++ +RG+ N+ TY I G + G + A+ +
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 233 SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
G+ +T+ ++ LC S + L K V LQ N +
Sbjct: 168 VSNGVYSSSITFRDILPQLC-------SRKELRKAVAMLLQKSSMVSNNV 210
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 28 NLLEGAYVEAMRSYG---RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQ 84
NLL +++Y RF + A ++ M P +YN++++ L + Q
Sbjct: 39 NLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQ 98
Query: 85 AHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA 144
A K V T+ I +C+ R + L M G N + Y T++
Sbjct: 99 ARK---------VSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIH 149
Query: 145 GFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
GF + GD + A ++F EM+ + TF ++ LC +
Sbjct: 150 GFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSR 189
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 122/246 (49%), Gaps = 27/246 (10%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
+ GK+ EA +F+ + E V ++ ++ ++ G +A +++ R+ + +V
Sbjct: 58 KVGKIAEARKLFDGLP----ERDVVTWTHVITGYIKLGDMREARELFDRVDSR---KNVV 110
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
T+T + + R+ + A L + M N V++ T++ G+ + G D A ELFDEM
Sbjct: 111 TWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
ER ++ ++N +V L ++G + E+ L ++ +R V ++ + GL + G +
Sbjct: 167 PER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKV 218
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
D A + +++++N +I G + +R+ E+++ M + D ++NT+
Sbjct: 219 DEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMP----ERDFASWNTM 270
Query: 283 IDGYCK 288
I G+ +
Sbjct: 271 ITGFIR 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 19/192 (9%)
Query: 108 IKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
I C+ G+ A +L + + V + V+ G+ + GD ARELFD + R
Sbjct: 53 IGELCKVGKIAEARKLFDGLP----ERDVVTWTHVITGYIKLGDMREARELFDRVDSRK- 107
Query: 168 CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVV 227
+V T+ +V G + + +E L ++ +R N+ ++N I G + G +D+A+
Sbjct: 108 --NVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALE 161
Query: 228 FLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
+ ++V++N+++ L ++ R+ E+ +M + D ++ ++DG
Sbjct: 162 LFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLA 213
Query: 288 KKGMVQDANRIL 299
K G V +A R+
Sbjct: 214 KNGKVDEARRLF 225
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 138/331 (41%), Gaps = 87/331 (26%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + G++ +A+++F+ M E ++ S+N+++ LV+ G ++A ++ RM + D
Sbjct: 150 YAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----D 201
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGC--SFNAVAYCTVVAGFYEFGDRDLAREL 158
V ++T + + G+ A RL F C N +++ ++ G+ + D A +L
Sbjct: 202 VVSWTAMVDGLAKNGKVDEARRL------FDCMPERNIISWNAMITGYAQNNRIDEADQL 255
Query: 159 FDEMLERSLCPDVATFNKLVHGLCKK--------------------------GFV--PES 190
F M ER D A++N ++ G + G+V E+
Sbjct: 256 FQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKEN 311
Query: 191 EKLLN---KVLKRG-VSPNLFTYNIFIQGLCREGA----------------------LDR 224
E+ LN K+L+ G V PN+ TY + I C + A +
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTY-VSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTS 370
Query: 225 AVVFLGSVSREGMSP------------DVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
A++ + S S E ++ D++++N++I E+ E ++M G
Sbjct: 371 ALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGF 430
Query: 273 QPDEFTYNTIIDGYCKKGMVQDANRILKDAV 303
+P TY ++ G+V+ KD V
Sbjct: 431 KPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 12/269 (4%)
Query: 42 GRFGKVQEAVDVFERMDLYNCE-PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
G+ K + ++VF M P Y+ +++++ + G A ++ MK+ G D
Sbjct: 108 GKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPD 167
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRN-----MSVFGCSFNAVAYCTVVAGFYEFGDRDLA 155
Y I + T AL +R + C N V Y ++ F + G D
Sbjct: 168 ASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 156 RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
LF ++ + PDV TFN ++ K G + E E +L ++ P++ T+N+ I
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDS 287
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQP 274
++ ++ S+ R P + T+N++I K+R+++ E + K +ND P
Sbjct: 288 YGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG-KARMIDKAEWVFKKMNDMNYIP 346
Query: 275 DEFTYNTIID--GYCKKGMVQDANRILKD 301
TY +I GYC G V A I ++
Sbjct: 347 SFITYECMIMMYGYC--GSVSRAREIFEE 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 123/292 (42%), Gaps = 7/292 (2%)
Query: 11 FNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYN 70
F++M+N A++ N L+ A++ KV+ +D + ++ C+P+V +YN
Sbjct: 156 FSEMKNSGCRPDASVYNALI-TAHLHTRDKAKALEKVRGYLDKMKGIE--RCQPNVVTYN 212
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
++ + G +Q + ++ + V DVYT+ + ++ + G +L M
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN 272
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
C + + + ++ + + + + + F ++ P + TFN ++ K + ++
Sbjct: 273 ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
Query: 191 EKLLNKVLKRGVSPNLFTYN--IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E + K+ P+ TY I + G C G++ RA V T N ++
Sbjct: 333 EWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAML 390
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
CR +E+++ H + PD TY + Y K M + ++K
Sbjct: 391 EVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMK 442
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNIL---VEFGYFNQAHKVYMRMKD 94
M +YG+ G ++E V RM C+P + ++N +++ EF Q K MR K+
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 95 KGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDL 154
K + T+ I ++ + A + + M+ + + Y ++ + G
Sbjct: 310 KPT---LPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSR 366
Query: 155 ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQ 214
ARE+F+E+ E +T N ++ C+ G E++KL + V P+ TY +
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 215 GLCREGALDRAVVFLGSVSREGMSPD 240
+ ++ + + + ++G+ P+
Sbjct: 427 AYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 102/241 (42%), Gaps = 4/241 (1%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R++ + GKV + +F+ +D+ P V+++N +M+ + G + V RM+
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
D+ T+ + I S+ + + +++ + +++ + + D A
Sbjct: 275 KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 158 LFDEMLERSLCPDVATFNKLV--HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
+F +M + + P T+ ++ +G C G V + ++ +V + T N ++
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEV 392
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
CR G A + S + PD TY + + + + + KM DG+ P+
Sbjct: 393 YCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Query: 276 E 276
+
Sbjct: 453 K 453
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 12/269 (4%)
Query: 42 GRFGKVQEAVDVFERMDLYNCE-PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
G+ K + ++VF M P Y+ +++++ + G A ++ MK+ G D
Sbjct: 108 GKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPD 167
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRN-----MSVFGCSFNAVAYCTVVAGFYEFGDRDLA 155
Y I + T AL +R + C N V Y ++ F + G D
Sbjct: 168 ASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQV 227
Query: 156 RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
LF ++ + PDV TFN ++ K G + E E +L ++ P++ T+N+ I
Sbjct: 228 NALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDS 287
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQP 274
++ ++ S+ R P + T+N++I K+R+++ E + K +ND P
Sbjct: 288 YGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG-KARMIDKAEWVFKKMNDMNYIP 346
Query: 275 DEFTYNTIID--GYCKKGMVQDANRILKD 301
TY +I GYC G V A I ++
Sbjct: 347 SFITYECMIMMYGYC--GSVSRAREIFEE 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 123/292 (42%), Gaps = 7/292 (2%)
Query: 11 FNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYN 70
F++M+N A++ N L+ A++ KV+ +D + ++ C+P+V +YN
Sbjct: 156 FSEMKNSGCRPDASVYNALI-TAHLHTRDKAKALEKVRGYLDKMKGIE--RCQPNVVTYN 212
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
++ + G +Q + ++ + V DVYT+ + ++ + G +L M
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN 272
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
C + + + ++ + + + + + F ++ P + TFN ++ K + ++
Sbjct: 273 ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
Query: 191 EKLLNKVLKRGVSPNLFTYN--IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E + K+ P+ TY I + G C G++ RA V T N ++
Sbjct: 333 EWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAML 390
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
CR +E+++ H + PD TY + Y K M + ++K
Sbjct: 391 EVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMK 442
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNIL---VEFGYFNQAHKVYMRMKD 94
M +YG+ G ++E V RM C+P + ++N +++ EF Q K MR K+
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 95 KGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDL 154
K + T+ I ++ + A + + M+ + + Y ++ + G
Sbjct: 310 KPT---LPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSR 366
Query: 155 ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQ 214
ARE+F+E+ E +T N ++ C+ G E++KL + V P+ TY +
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 215 GLCREGALDRAVVFLGSVSREGMSPD 240
+ ++ + + + ++G+ P+
Sbjct: 427 AYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 102/241 (42%), Gaps = 4/241 (1%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R++ + GKV + +F+ +D+ P V+++N +M+ + G + V RM+
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
D+ T+ + I S+ + + +++ + +++ + + D A
Sbjct: 275 KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 158 LFDEMLERSLCPDVATFNKLV--HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
+F +M + + P T+ ++ +G C G V + ++ +V + T N ++
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEV 392
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
CR G A + S + PD TY + + + + + KM DG+ P+
Sbjct: 393 YCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Query: 276 E 276
+
Sbjct: 453 K 453
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 13/266 (4%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG---- 96
YG+ GKV++A +F ++ + S+N+++ V+ G ++A ++ +++
Sbjct: 339 YGKQGKVKDAEHLFRQIR----NKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCN 394
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAR 156
V ++V T+T IK GR +L R M N+V C +++ E +L R
Sbjct: 395 VKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGR 454
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
E+ ++ S+ ++ N LV+ K G + E + + + +L ++N I+G
Sbjct: 455 EIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDK----DLISWNSIIKGY 510
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQPD 275
G ++A+ + G PD + V+ V + E + M GL+P
Sbjct: 511 GMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
Query: 276 EFTYNTIIDGYCKKGMVQDANRILKD 301
+ Y I+D + G +++A+ I+K+
Sbjct: 571 QEHYACIVDLLGRVGFLKEASEIVKN 596
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 134/297 (45%), Gaps = 7/297 (2%)
Query: 14 MENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIM 73
+ NLL M+ + E L Y M+ + + ++++ +F+ M +P ++ I+
Sbjct: 162 LNNLLETMKPSREVIL----YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTII 217
Query: 74 NILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCS 133
+ + G +A + + +M G D T I ++ R G AL L
Sbjct: 218 SCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWR 277
Query: 134 FNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKL 193
+AV + T++ + G+ D +++EM + P++ +N+L+ + + +++ +
Sbjct: 278 IDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKII 337
Query: 194 LNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCR 253
++ G +PN TY ++ R D A+ + +G+S V+ YNT++ +C
Sbjct: 338 YKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCA 396
Query: 254 KSRVV-ESEECLHKMVN-DGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
+R V E+ E M N + PD +T++++I Y G V +A L GF+
Sbjct: 397 DNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFE 453
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 122/292 (41%), Gaps = 6/292 (2%)
Query: 9 REFNQMENLLSEM--RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSV 66
++ + E L EM R +N + R + G + AV+ FE+M + CEP
Sbjct: 189 KDLEKSEKLFDEMLERGIKPDNATFTTIISCAR---QNGVPKRAVEWFEKMSSFGCEPDN 245
Query: 67 HSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRN 126
+ A+++ G + A +Y R + + D T++ I+ + +G L +
Sbjct: 246 VTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEE 305
Query: 127 MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF 186
M G N V Y ++ A+ ++ +++ P+ +T+ LV + +
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARY 365
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV-VFLGSVSREGMSPDVVTYN 245
++ + ++ ++G+S + YN + +D A +F + E PD T++
Sbjct: 366 GDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFS 425
Query: 246 TVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANR 297
++I RV E+E L +M G +P F ++I Y K V D R
Sbjct: 426 SLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVR 477
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 1/204 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R YG G ++++E M +P++ YN +++ + QA +Y + G
Sbjct: 287 IRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGF 346
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+ TY ++++ R AL + R M G S + Y T+++ + D A E
Sbjct: 347 TPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFE 406
Query: 158 LFDEMLERSLC-PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
+F +M C PD TF+ L+ G V E+E L ++ + G P LF IQ
Sbjct: 407 IFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCY 466
Query: 217 CREGALDRAVVFLGSVSREGMSPD 240
+ +D V V G++PD
Sbjct: 467 GKAKQVDDVVRTFDQVLELGITPD 490
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 29/242 (11%)
Query: 62 CEPSVHSYNAIMNILVEFGY-FNQAHKVYMRM-KDKGVGSDVYTYTIRIKSFCRTGRPHA 119
CE SV YN I+ + FN+A VY +M + D+ TYT+ + S +
Sbjct: 139 CEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLK------ 192
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
FN + C V R L +M + PD N ++
Sbjct: 193 -------------RFNKLNVCYVYL--------HAVRSLTKQMKSNGVIPDTFVLNMIIK 231
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
K V E+ ++ ++ G PN +TY+ ++G+C +G + + + F + +GM P
Sbjct: 232 AYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVP 291
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+ Y +IC L + R+ E+ E ++ M+ + L PD TYNT++ C+ G +A ++
Sbjct: 292 NGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMV 351
Query: 300 KD 301
++
Sbjct: 352 EE 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P N I+ + ++A +V+ M G + YTY+ +K C GR L
Sbjct: 221 PDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGF 280
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
+ M V G N Y ++ D A E+ +ML SL PD+ T+N ++ LC+
Sbjct: 281 YKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCR 340
Query: 184 KGFVPESEKLLNKVLKR 200
G E+ +++ + KR
Sbjct: 341 GGRGSEALEMVEEWKKR 357
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 109/241 (45%), Gaps = 7/241 (2%)
Query: 52 DVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSF 111
++++R+ E S+ N ++ ++ + + A ++Y + D+G + +Y + + F
Sbjct: 367 ELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHF 426
Query: 112 -------CRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ G +RLL M G + V+ + + A ++F M++
Sbjct: 427 NILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVD 486
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
P V ++ L+ L K E+ ++ N ++K G+ PNL+ Y L + +
Sbjct: 487 NGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNL 546
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
L ++ +G+ P VVT+N VI G R + E H+M ++ ++P+E TY +I+
Sbjct: 547 LDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIE 606
Query: 285 G 285
Sbjct: 607 A 607
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 115/262 (43%), Gaps = 7/262 (2%)
Query: 42 GRFGKVQEAVDVFERMDLYNCEPSVHSYNAIM---NILVEF----GYFNQAHKVYMRMKD 94
G+ K A++++E + EP+ SY ++ NIL+ G + ++ +M+D
Sbjct: 392 GKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMED 451
Query: 95 KGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDL 154
KG+ + + + + AA+++ + M G ++Y +++ + D
Sbjct: 452 KGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDE 511
Query: 155 ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQ 214
A +++ M++ + P++ + + L + + LL ++ +G+ P++ T+N I
Sbjct: 512 AFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVIS 571
Query: 215 GLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQP 274
G R G A + + E + P+ +TY +I L ++ + E K N+GL+
Sbjct: 572 GCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKL 631
Query: 275 DEFTYNTIIDGYCKKGMVQDAN 296
Y+ ++ G D N
Sbjct: 632 SSKPYDAVVKSAETYGATIDLN 653
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 144/338 (42%), Gaps = 57/338 (16%)
Query: 1 MLQKLGHHREFNQMENLLSEMRAT---LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERM 57
+LQ+ G + Q + + ++ T N LL + Y + GK +A VF++M
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGM---YMKCGKPIDACKVFDQM 108
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
L N ++S+N +++ V+ G +A V+ M ++ DV ++ + + + G
Sbjct: 109 HLRN----LYSWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNL 160
Query: 118 HAALRLLRNMSVFGCSFNAVAY-----------------------------------CTV 142
H AL + G FN ++ C++
Sbjct: 161 HEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSI 220
Query: 143 VAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGV 202
+ + + G + A+ FDEM + D+ + L+ G K G + +EKL ++ ++
Sbjct: 221 IDAYAKCGQMESAKRCFDEMTVK----DIHIWTTLISGYAKLGDMEAAEKLFCEMPEK-- 274
Query: 203 SPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEE 262
N ++ I G R+G+ +RA+ + G+ P+ T+++ +C + + +E
Sbjct: 275 --NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKE 332
Query: 263 CLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
M+ ++P+ +++ID Y K G ++ + R+ +
Sbjct: 333 IHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 118/283 (41%), Gaps = 17/283 (6%)
Query: 25 LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQ 84
L N +L + ++A Y + G+++ A F+ M + + +H + +++ + G
Sbjct: 211 LSNVVLSCSIIDA---YAKCGQMESAKRCFDEMTVKD----IHIWTTLISGYAKLGDMEA 263
Query: 85 AHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA 144
A K++ M +K + ++T I + R G + AL L R M G + + +
Sbjct: 264 AEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLC 319
Query: 145 GFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP 204
+E+ M+ ++ P+ + L+ K G + SE++ +
Sbjct: 320 ASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKH--- 376
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESE-EC 263
+ +N I L + G +A+ L + + + P+ T VI C S +VE
Sbjct: 377 DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTL-VVILNACSHSGLVEEGLRW 435
Query: 264 LHKM-VNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
M V G+ PD+ Y +ID + G ++ R +++ F+
Sbjct: 436 FESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE 478
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 131/265 (49%), Gaps = 26/265 (9%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
++S GRFG + +A+ E++ + +P V N IM++ V+ A KV+ ++ +
Sbjct: 113 IKSAGRFGILFQAL--VEKLGFFK-DPYVR--NVIMDMYVKHESVESARKVFDQISQRK- 166
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
GSD + + I + + G A +L M + V++ ++ GF + D + AR+
Sbjct: 167 GSD---WNVMISGYWKWGNKEEACKLFDMMP----ENDVVSWTVMITGFAKVKDLENARK 219
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
FD M E+S V ++N ++ G + GF ++ +L N +L+ GV PN T+ I I
Sbjct: 220 YFDRMPEKS----VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS 275
Query: 218 --REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQP 274
+ +L R++V L R ++ V T + + K R ++S ++ N+ G Q
Sbjct: 276 FRADPSLTRSLVKLIDEKRVRLNCFV---KTALLDMHAKCRDIQSA---RRIFNELGTQR 329
Query: 275 DEFTYNTIIDGYCKKGMVQDANRIL 299
+ T+N +I GY + G + A ++
Sbjct: 330 NLVTWNAMISGYTRIGDMSSARQLF 354
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 137/339 (40%), Gaps = 74/339 (21%)
Query: 26 ENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQA 85
EN+++ ++ + + + ++ A F+RM E SV S+NA+++ + G+ A
Sbjct: 195 ENDVV--SWTVMITGFAKVKDLENARKYFDRMP----EKSVVSWNAMLSGYAQNGFTEDA 248
Query: 86 HKVYMRMKDKGVGSDVYTYTI--------------------------RIKSFCRTG--RP 117
+++ M GV + T+ I R+ F +T
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 118 HAALRLL----RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVAT 173
HA R + R + G N V + +++G+ GD AR+LFD M +R +V +
Sbjct: 309 HAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR----NVVS 364
Query: 174 FNKLVHGLCKKGFVPESEKLLNKVLKRGVS-PNLFTYNIFIQGLCREGALD--------- 223
+N L+ G G + + ++ G S P+ T + L+
Sbjct: 365 WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI 424
Query: 224 ------------RAVVFLGS----------VSREGMSPDVVTYNTVICGLCRKSRVVESE 261
R+++F+ + V E DVV+YNT+ VE+
Sbjct: 425 RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETL 484
Query: 262 ECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
L KM ++G++PD TY +++ + G++++ RI K
Sbjct: 485 NLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFK 523
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 124/290 (42%), Gaps = 17/290 (5%)
Query: 3 QKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNC 62
+KL + N N ++E TL + + + +++A+ E D+ Y
Sbjct: 76 KKLDRRSKANGWVNTVTE---TLSDLIAKKQWLQAL----------EVFDMLREQTFY-- 120
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
+P +Y ++ +L + G N+A K++ M ++G+ V YT + ++ R+ A
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 123 LLRNMSVFG-CSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGL 181
+L M F C + Y T++ + DL L+ EM ER + P+ T N ++ G
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGY 240
Query: 182 CKKGFVPESEKLLNKVL-KRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
+ G + EK+L+ +L P+++T NI + G +D + G+ P+
Sbjct: 241 GRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPE 300
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKG 290
T+N +I +K + + M TYN II+ + G
Sbjct: 301 TRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVG 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 2/263 (0%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
EG Y++ + G+ G+ A +F+ M EP+V Y A++ + A +
Sbjct: 124 EGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILD 183
Query: 91 RMKD-KGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF 149
+MK DV+TY+ +K+ + L + M + N V V++G+
Sbjct: 184 KMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRV 243
Query: 150 GDRDLARELFDEMLERSLC-PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFT 208
G D ++ +ML + C PDV T N ++ G + E K G+ P T
Sbjct: 244 GRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRT 303
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV 268
+NI I ++ D+ + + + TYN +I E +M
Sbjct: 304 FNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMR 363
Query: 269 NDGLQPDEFTYNTIIDGYCKKGM 291
++G++ D T+ +I+GY G+
Sbjct: 364 SEGMKADTKTFCCLINGYANAGL 386
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 122/330 (36%), Gaps = 42/330 (12%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGA--YVEAMRSYGRFGKVQEAVDVFERMD 58
+L LG + N+ + L EM LE L Y + +Y R + +A + ++M
Sbjct: 130 LLVLLGKSGQPNRAQKLFDEM---LEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMK 186
Query: 59 LY-NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
+ C+P V +Y+ ++ V+ F+ +Y M ++ + + T I + + R GR
Sbjct: 187 SFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRF 246
Query: 118 HAALRLLRNMSV-FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNK 176
++L +M V C + +++ F G D+ +++ + P+ TFN
Sbjct: 247 DQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNI 306
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
L+ KK + ++ + K TYN I+ G + + EG
Sbjct: 307 LIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEG 366
Query: 237 MSPDVVT-----------------------------------YNTVICGLCRKSRVVESE 261
M D T YN VI + ++E E
Sbjct: 367 MKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEME 426
Query: 262 ECLHKMVNDGLQPDEFTYNTIIDGYCKKGM 291
+M D T+ +++ Y K+GM
Sbjct: 427 RVYIRMKERQCVCDSRTFEIMVEAYEKEGM 456
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 155 ARELFDEMLERSL-CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
A E+FD + E++ P T+ KL+ L K G ++KL +++L+ G+ P + Y +
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALL 166
Query: 214 QGLCREGALDRAVVFLGSV-SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
R +D A L + S PDV TY+T++ C + + + L+K +++ L
Sbjct: 167 AAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKA-CVDASQFDLVDSLYKEMDERL 225
Query: 273 -QPDEFTYNTIIDGYCKKGMVQDANRILKD 301
P+ T N ++ GY + G ++L D
Sbjct: 226 ITPNTVTQNIVLSGYGRVGRFDQMEKVLSD 255
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 132/295 (44%), Gaps = 49/295 (16%)
Query: 2 LQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL-- 59
++KLG + + +M+++++++ ++ + E Y + + + GK+ AV++F M
Sbjct: 179 IRKLGAAKMYQEMDDIVNQV-LSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSK 237
Query: 60 -YNCEPSVHSYNAIMNILVEFGYFNQAHKVYM--------RMKDKGVGSDVYTYTIRIKS 110
C P++ +Y+ + L+ G + + VYM +M D G+ DV+ +K
Sbjct: 238 NLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKG 297
Query: 111 FCRTGRPHAALRLLRNMSV-FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCP 169
+ + + ALR+ MSV + C P
Sbjct: 298 YVLSLHVNDALRIFHQMSVVYDCE-----------------------------------P 322
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
+ T++ L+HGLC +G + +LL+++ +G PN +YN + G +D AV L
Sbjct: 323 NSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCL 382
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+ G D ++Y T++ CRK + E+ L +M+ + D +Y+ +++
Sbjct: 383 WEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL-EMLREKQLVDRDSYDKLVN 436
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKV-LKRGVSPNLFTYNI 211
+ R LF +M++ + PDV N LV G V ++ ++ +++ + PN FTY+
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
I GLC +G A L + +G P+ +YN+++ + ++ +CL +M+ +G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILK 300
D +Y T++D C+KG +A R+L+
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLE 418
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 135 NAVAYCTVVAGFYEFGDRDLARELFDEML-ERSL-C-PDVATFNKLVHGLCKKG------ 185
N Y +++ F + G A +F M+ ++L C P + T++ L L +G
Sbjct: 206 NENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 186 --FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR-EGMSPDVV 242
++ L +++ G+ P++F N ++G ++ A+ +S P+
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSF 325
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
TY+ +I GLC + R + + E L +M G P+ +YN++++ + G + DA + L +
Sbjct: 326 TYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEM 385
Query: 303 VFKG 306
+ G
Sbjct: 386 IENG 389
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 128/274 (46%), Gaps = 12/274 (4%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNIL--VEFGYFNQAHKVYMRMKDKGVG 98
Y GK E V+VFE M N E + +++L A + M + G+
Sbjct: 149 YSDNGKFSEVVEVFEYMK--NNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGID 206
Query: 99 S-DVYTYTIRIKSFCRTGRPHAALRLLRNMS-VFGCSFNAVAYCTVV---AGFYEFGDRD 153
VY+ T+ + C G A L+ M V G N V + +++ ++F + D
Sbjct: 207 VVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELD 266
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
L +L M + S+ D+ ++ L+ G G V E+E+L+ + + + + YN+ +
Sbjct: 267 LVLKL---MEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIM 323
Query: 214 QGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
G R G +++ + +S G++P+ TY ++ GLC+ +V E+ L+++ + +
Sbjct: 324 NGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFE 383
Query: 274 PDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
DE Y+T+ + + GM+ + ++ + + GF
Sbjct: 384 IDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGF 417
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMK-DKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
+V+S ++ +L G +A ++ M KGV +++ T+ I + +
Sbjct: 209 TVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLV 268
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
L+ M + +Y ++ GF +G + A L M ++ L + +N +++G +
Sbjct: 269 LKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSR 328
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G V + +L +++ RGV+PN TY + + GLC+ G + A+ FL + D
Sbjct: 329 FGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEM 388
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQP 274
Y+T+ R + +S E + +M+ DG P
Sbjct: 389 YSTLSEECYRVGMIDKSLEVVAEMIRDGFIP 419
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 1/172 (0%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y + + +GKV+EA + M + YN IMN FG + ++Y M
Sbjct: 283 SYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEM 342
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+GV + TY + + C+ G+ A+ L + V + Y T+ Y G
Sbjct: 343 SSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMI 402
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP 204
D + E+ EM+ P +L L + E++ L+ V+K G+ P
Sbjct: 403 DKSLEVVAEMIRDGFIPGATICERLADSLFEVN-RKEAQMLITIVVKCGIKP 453
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 10/272 (3%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVH----SYNAIMNILVEFGYFNQAHKVYMRMKDKGVG 98
RFG+ + E M L + V +Y+ I+ +N+A + + RM G+
Sbjct: 197 RFGR---QFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLM 253
Query: 99 SDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLAREL 158
D TY+ + + ++G+ L L G +A+A+ + F E GD D R +
Sbjct: 254 PDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYV 313
Query: 159 FDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCR 218
EM + P+V +N L+ + + G + L N++L+ G++PN T ++ +
Sbjct: 314 LQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGK 373
Query: 219 EGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ--PDE 276
A+ + + D + YNT++ +C + E E L + + +Q PD
Sbjct: 374 ARWARDALQLWEEMKAKKWPMDFILYNTLL-NMCADIGLEEEAERLFNDMKESVQCRPDN 432
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
F+Y +++ Y G + A + ++ + G +
Sbjct: 433 FSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQ 464
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 3/262 (1%)
Query: 49 EAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRI 108
+A++ FERM P +Y+AI+++ + G + +Y R G D +++
Sbjct: 239 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 298
Query: 109 KSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLC 168
K F G +L+ M N V Y T++ G LAR LF+EMLE L
Sbjct: 299 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 358
Query: 169 PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
P+ T LV K + ++ +L ++ + + YN + +C + L+
Sbjct: 359 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLL-NMCADIGLEEEAER 417
Query: 229 LGSVSREGMS--PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGY 286
L + +E + PD +Y ++ + ++ E +M+ G+Q + ++
Sbjct: 418 LFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCL 477
Query: 287 CKKGMVQDANRILKDAVFKGFK 308
K + D + ++ +G K
Sbjct: 478 GKAKRIDDVVYVFDLSIKRGVK 499
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 3/260 (1%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R++ +++EA +FE++ P V + N ++ E G Y M +G
Sbjct: 183 LRAFCTEREMKEARSIFEKLH-SRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGF 241
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+ TY IRI FC+ ALRL +M T++ G ++ AR+
Sbjct: 242 KPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQ 301
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL- 216
LFDE+ +R L PD +N L+ L K G V + K++ ++ ++G+ P+ T++ G+
Sbjct: 302 LFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMM 361
Query: 217 -CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
+E + + + + P T ++ C V + M+ G P
Sbjct: 362 KSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPH 421
Query: 276 EFTYNTIIDGYCKKGMVQDA 295
+ C + DA
Sbjct: 422 GHALELLTTALCARRRANDA 441
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 4/243 (1%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRM-KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+ ++IL YF+QA + + KD + +I + + G L M
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKM 165
Query: 128 S--VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKG 185
+F F + ++ F + AR +F+++ R PDV T N L+ G + G
Sbjct: 166 EKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAG 224
Query: 186 FVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYN 245
V +E ++++KRG PN TY I I G C++ A+ + R V
Sbjct: 225 DVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILT 284
Query: 246 TVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
T+I G +++ + ++ GL PD YN ++ K G V A +++K+ K
Sbjct: 285 TLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEK 344
Query: 306 GFK 308
G +
Sbjct: 345 GIE 347
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 122/302 (40%), Gaps = 61/302 (20%)
Query: 53 VFERMDLYNCEPSVHSYNAIMNILV-EFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSF 111
++E + N +P+++ N++MN+ + GY KVY M+ V +D+ +Y I +K+
Sbjct: 289 IYEDLLKENIKPNIYVINSLMNVNSHDLGY---TLKVYKNMQILDVTADMTSYNILLKTC 345
Query: 112 CRTGRPHAALRLLRNMSVFGCS----FNAVAYCTVVAGFYEFGDRDLARELFDEMLERSL 167
C GR A + + S +A YCT++ F + A ++ D+M +
Sbjct: 346 CLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGV 405
Query: 168 CPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA-- 225
P+ T++ L+ G V ++ L ++L G PN +NI + DRA
Sbjct: 406 TPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFR 465
Query: 226 ------------------VVFLGSVSREGM---------------------------SPD 240
+V G S + P
Sbjct: 466 LFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPT 525
Query: 241 VVTYNTVI--CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
TYN ++ CG + +E + +M + GL P++ T++T+ID G V+ A RI
Sbjct: 526 TATYNILLKACG----TDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRI 581
Query: 299 LK 300
L+
Sbjct: 582 LR 583
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 114/270 (42%), Gaps = 28/270 (10%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G V++A +FE M CEP+ +N +++ VE +++A +++ K V +Y
Sbjct: 423 GLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYAD 482
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF--------------- 149
I K RT P+ +L+N G N + + F
Sbjct: 483 DIVSKG--RTSSPN----ILKNNGP-GSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA 535
Query: 150 --GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
D +EL DEM L P+ T++ L+ G V + ++L + G P++
Sbjct: 536 CGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVV 595
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL--- 264
Y I+ L A + R + P+ VTYNT++ + ++E +CL
Sbjct: 596 AYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIY 655
Query: 265 HKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
M N G +P++ +I+ +C +G++Q+
Sbjct: 656 QDMRNAGYKPNDHFLKELIEEWC-EGVIQE 684
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 122/258 (47%), Gaps = 3/258 (1%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
V +A+++++ + + + +V+ N+I++ LV+ G + K++ +MK G+ DV TY
Sbjct: 147 VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNT 206
Query: 107 RIKSF--CRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ + G P A+ L+ + G ++V Y TV+A G + A +M
Sbjct: 207 LLAGCIKVKNGYP-KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKV 265
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
P++ ++ L++ KG ++++L+ ++ G+ PN ++ + G DR
Sbjct: 266 EGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDR 325
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+ L + G + + + Y ++ GL + ++ E+ M G++ D + + +I
Sbjct: 326 SRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMIS 385
Query: 285 GYCKKGMVQDANRILKDA 302
C+ ++A + +D+
Sbjct: 386 ALCRSKRFKEAKELSRDS 403
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 8/244 (3%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMS 128
Y ++ I G +A +MK +G ++Y Y+ + S+ G A L+ M
Sbjct: 240 YGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMK 299
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
G N V T++ + + G D +REL E+ + + L+ GL K G +
Sbjct: 300 SIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLE 359
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP----DVVTY 244
E+ + + + +GV + + +I I LCR A +SR+ + D+V
Sbjct: 360 EARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEA----KELSRDSETTYEKCDLVML 415
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVF 304
NT++C CR + + KM + PD T++ +I + K+ + A + D
Sbjct: 416 NTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHS 475
Query: 305 KGFK 308
KG +
Sbjct: 476 KGHR 479
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 121/272 (44%), Gaps = 3/272 (1%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R +G G+ Q+ + +FE M + + SV +Y++ + V ++A ++Y + D+
Sbjct: 105 LRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIK-FVGAKNVSKALEIYQSIPDEST 162
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD-RDLAR 156
+VY + + G+ + ++L M G + V Y T++AG + + A
Sbjct: 163 KINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAI 222
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
EL E+ + D + ++ G E+E + ++ G SPN++ Y+ +
Sbjct: 223 ELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSY 282
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
+G +A + + G+ P+ V T++ + S E L ++ + G +E
Sbjct: 283 SWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENE 342
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
Y ++DG K G +++A I D KG +
Sbjct: 343 MPYCMLMDGLSKAGKLEEARSIFDDMKGKGVR 374
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 96/204 (47%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
G+ +EA + ++M + P+++ Y++++N G + +A ++ MK G+ +
Sbjct: 251 GRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMM 310
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
T +K + + G + LL + G + N + YC ++ G + G + AR +FD+M
Sbjct: 311 TTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKG 370
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ + D + ++ LC+ E+++L +L N + CR G ++
Sbjct: 371 KGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMES 430
Query: 225 AVVFLGSVSREGMSPDVVTYNTVI 248
+ + + + +SPD T++ +I
Sbjct: 431 VMRMMKKMDEQAVSPDYNTFHILI 454
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 10/187 (5%)
Query: 10 EFNQMENLLSEMRAT--LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVH 67
++ + + L++EM++ + N ++ ++ G F + +E + E E
Sbjct: 287 DYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENE---M 343
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
Y +M+ L + G +A ++ MK KGV SD Y +I I + CR+ R A L R+
Sbjct: 344 PYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDS 403
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
+ V T++ + G+ + + +M E+++ PD TF+ L+ K F+
Sbjct: 404 ETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI-----KYFI 458
Query: 188 PESEKLL 194
E LL
Sbjct: 459 KEKLHLL 465
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 114/271 (42%), Gaps = 10/271 (3%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y G+ A+ F M + Y+ ++N LVE F+ ++ ++ +G
Sbjct: 192 YAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCA 251
Query: 101 VYTYTIRIKSFCRTGRPHAA---LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
V T++I +K FC+ G+ A LR L GC + +F + A +
Sbjct: 252 V-THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQE---ATK 307
Query: 158 LFDEM-LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLK-RGVSPNLFTYNIFIQG 215
L DE+ L ++ D A +N + L K GF+ L K+ G +F YN +
Sbjct: 308 LLDEIKLVGTVNMDRA-YNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQ 366
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
L +E LD L + G+SP+ T N +C C+ V E+ E G P
Sbjct: 367 LLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPT 426
Query: 276 EFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
+YN +I C V+ A +LK A+ +G
Sbjct: 427 AMSYNYLIHTLCANESVEQAYDVLKGAIDRG 457
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 1/259 (0%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
++ + + GK+ EA D + + +++ L F +A K+ +K G
Sbjct: 258 VKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGT 317
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF-GCSFNAVAYCTVVAGFYEFGDRDLAR 156
+ Y I I++ + G + L+ +S GC Y ++V + + D
Sbjct: 318 VNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVY 377
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
++ EM+ R + P+ T N + CK GFV E+ +L + G +P +YN I L
Sbjct: 378 DILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTL 437
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
C ++++A L G T++T+ LC K + + E + L P
Sbjct: 438 CANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKR 497
Query: 277 FTYNTIIDGYCKKGMVQDA 295
II C G V+DA
Sbjct: 498 IAGCKIISALCDVGKVEDA 516
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 2/289 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMD-L 59
++ L R+F + LL E++ N+ + AY +R+ + G + D +++ L
Sbjct: 292 LVDALCSKRKFQEATKLLDEIKLVGTVNM-DRAYNIWIRALIKAGFLNNPADFLQKISPL 350
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
CE V YN+++ L++ + + + M +GV + T + FC+ G
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
AL L R+ S G + A++Y ++ + A ++ ++R TF+ L +
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTN 470
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
LC KG + +L+ +R + P I LC G ++ A++ ++ G+
Sbjct: 471 ALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDT 530
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
+ ++I G R + + + +M G P Y +I C+
Sbjct: 531 SFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCE 579
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 7/258 (2%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GKV++A+ + E + + S + +++ + + A K+ +RM++KG Y
Sbjct: 511 GKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLY 570
Query: 105 TIRIKSFCR--TGRPHAALRLLR-NMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
I+ C +G + LL+ +S++ A AGF G LAR ++D
Sbjct: 571 RNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFA--GKPKLARLVYDM 628
Query: 162 MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGA 221
M + P VA+ ++ K + ++ + + ++G + Y + I GLC+
Sbjct: 629 MDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANK 687
Query: 222 LDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNT 281
LD A+ FL + EG+ P + Y I LC + + E+ +++ G + F N
Sbjct: 688 LDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNV 747
Query: 282 IIDGYCK-KGMVQDANRI 298
++ K KG+ + R+
Sbjct: 748 LLHNAMKSKGVYEAWTRM 765
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 121/254 (47%), Gaps = 13/254 (5%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMK 93
+++ +RS R ++EAV + M + +P +++ A++ + + +++ +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 94 DKGVGSDVYTYTIRIKSFCRT-GRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
G G D T + + R G A ++ +S N V++ ++++ F
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS----ERNQVSWNSLISSLCSFEKW 180
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP---NLFTY 209
++A E F ML+ ++ P T +V C +PE + +V G+ N F
Sbjct: 181 EMALEAFRCMLDENVEPSSFTLVSVVTA-CSNLPMPEGLMMGKQVHAYGLRKGELNSFII 239
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
N + + G L + V LGS D+VT+NTV+ LC+ +++E+ E L +MV
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGR----DLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 270 DGLQPDEFTYNTII 283
+G++PDEFT ++++
Sbjct: 296 EGVEPDEFTISSVL 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 20/242 (8%)
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM-- 127
N +M++ G + A +++ +M+D+ D+ T+ I + + AL LL M
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDR----DLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 128 ---------SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
S N++ T++ +E+ ++ +L DVA + LV
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
K G + S K+ +++ ++ N+ T+N+ I G A+ L + +G+
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQK----NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQPDEFTYNTIIDGYCKKGMVQDANR 297
P+ VT+ +V V E + M D G++P Y ++D + G +++A +
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 675
Query: 298 IL 299
++
Sbjct: 676 LM 677
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 47/289 (16%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y G + +F R+DL S+ +N+I++ V G NQA Y +M GV D
Sbjct: 80 YAMCGSFSDCGKMFYRLDLR--RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPD 137
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRN-MSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
V T+ +K+ C + + L + +S G N +++ + E+G D+ +LF
Sbjct: 138 VSTFPCLVKA-CVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF 196
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN--------- 210
D +L++ D +N +++G K G + K + + +SPN T++
Sbjct: 197 DRVLQK----DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK 252
Query: 211 ------------IFIQGLCREGALDRAVVFLGS----------VSREGMSPDVVTYNTVI 248
+ + G+ EG++ +++ + S + R D VT+N +I
Sbjct: 253 LLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMI 312
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDG--------YCKK 289
G + + ES ++M++ G+ PD T+++++ YCK+
Sbjct: 313 SGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQ 361
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
A++++ + G N A++++ R+ + D+ ++ I ++ P AA+ + R M V
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKR----DIVSWNSMITRCAQSDNPSAAIDIFRQMGVS 536
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
G ++ V+ ++ + + M++ SL DV + + L+ K G +
Sbjct: 537 GICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNL--- 593
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL-DRAVVFLGSVSREGMSPDVVTYNTVIC 249
K V K N+ ++N I G L D +F V + G+ PD +T+ +I
Sbjct: 594 -KAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIIS 652
Query: 250 GLCRKSRVVESEECLHKMVND-GLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVF 304
C V E M D G+QP + Y ++D + + G + +A +K F
Sbjct: 653 SCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPF 708
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/246 (17%), Positives = 105/246 (42%), Gaps = 8/246 (3%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+ Y + G + + F M + P+ +++ ++++ + +++ + GV
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+ + + + GR A +L R MS + V + +++G+ + G + +
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLT 326
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
F EM+ + PD TF+ L+ + K + +++ +++ +S ++F + I
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYF 386
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
+ R V ++ + S DVV + +I G ++S E +V + P+E
Sbjct: 387 K----CRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 278 TYNTII 283
T +I+
Sbjct: 443 TLVSIL 448
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 47 VQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTI 106
+ E FE M Y P+ ++N ++++ + F + +++++ K GV DV +Y
Sbjct: 680 LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNT 738
Query: 107 RIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERS 166
I ++ + ++NM G S + AY T++ + + + R + M + +
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKST 798
Query: 167 LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
PD T+N +++ ++G++ E +L ++ + G+ P+L +YN I+ G ++ AV
Sbjct: 799 SGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAV 858
Query: 227 VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
+ + + PD VTY ++ L R +E+
Sbjct: 859 GLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 46/260 (17%)
Query: 89 YMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAV-----AYCTVV 143
+MR K VG+ V Y++ ++ R A L++ + C F+ + TV+
Sbjct: 163 WMRCNGKLVGNFV-AYSLILRVLGRREEWDRAEDLIKEL----CGFHEFQKSYQVFNTVI 217
Query: 144 AGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK-----------------GF 186
+ G+ LA + F MLE + P+VAT L+ GL +K G
Sbjct: 218 YACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLM-GLYQKNWNVEEAEFAFSHMRKFGI 276
Query: 187 VPES------------------EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
V ES E++++ + + V L + + + ++G ++ A
Sbjct: 277 VCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESI 336
Query: 229 LGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCK 288
L S+ G SP+++ YNT+I G + ++ ++ H++ N GL+PDE +Y ++I+G+ +
Sbjct: 337 LVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGR 396
Query: 289 KGMVQDANRILKDAVFKGFK 308
++A ++ G+K
Sbjct: 397 ADNYEEAKHYYQELKRCGYK 416
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 4/266 (1%)
Query: 38 MRSYGRFGKVQEAVDVFERMD-LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG 96
+R Y + G ++EA V E MD + P V+ + ++ I + ++ +Y R++ G
Sbjct: 600 VRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSG 659
Query: 97 VGSDVYTYTIRIKSFCRTGRPHAALR-LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLA 155
+ + Y I C P L M +G + N V + ++ + +
Sbjct: 660 IHWNQEMYNCVINC-CARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKV 718
Query: 156 RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
ELF + +R DV ++N ++ K + + G S +L YN +
Sbjct: 719 NELF-LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDA 777
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
++ +++ L + + PD TYN +I + + E + L ++ GL PD
Sbjct: 778 YGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPD 837
Query: 276 EFTYNTIIDGYCKKGMVQDANRILKD 301
+YNT+I Y GMV++A ++K+
Sbjct: 838 LCSYNTLIKAYGIGGMVEEAVGLVKE 863
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 123/271 (45%), Gaps = 8/271 (2%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYN--CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK 95
M Y + V+EA F M + CE + Y++++ I +++A +V MK
Sbjct: 252 MGLYQKNWNVEEAEFAFSHMRKFGIVCESA---YSSMITIYTRLRLYDKAEEVIDLMKQD 308
Query: 96 GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLA 155
V + + + + ++ + G+ A +L +M G S N +AY T++ G+ + + A
Sbjct: 309 RVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAA 368
Query: 156 RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
+ LF + L PD ++ ++ G + E++ ++ + G PN F I
Sbjct: 369 QGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINL 428
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK-MVNDGLQP 274
+ G D A+ + ++ G+ + +I K ++ C+ K ++ ++
Sbjct: 429 QAKYGDRDGAIKTIEDMT--GIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRL 486
Query: 275 DEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
++ ++++++ Y K GMV D +L++ ++
Sbjct: 487 NQTSFSSLVMAYVKHGMVDDCLGLLREKKWR 517
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 115/282 (40%), Gaps = 6/282 (2%)
Query: 29 LLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV 88
L + ++ + +Y + G V + + + + H Y+ ++ E G A K+
Sbjct: 486 LNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKI 545
Query: 89 YMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYE 148
Y + +++ + I + G A +L N+ G + + + VV + +
Sbjct: 546 YNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVK 605
Query: 149 FGDRDLA---RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
G + A E+ DE ++ + PDV F ++ K + + L ++ K G+ N
Sbjct: 606 AGSLEEACSVLEIMDE--QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWN 663
Query: 206 LFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLH 265
YN I R LD + R G +P+ VT+N V+ + K+++ + L
Sbjct: 664 QEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFN-VLLDVYGKAKLFKKVNELF 722
Query: 266 KMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+ D +YNTII Y K + + +K+ F GF
Sbjct: 723 LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGF 764
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/301 (18%), Positives = 119/301 (39%), Gaps = 4/301 (1%)
Query: 1 MLQKLGHHREFNQMENLLSEMRAT-LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDL 59
ML + E++L M A N++ AY + YG+ K++ A +F R+
Sbjct: 320 MLNAYSQQGKMELAESILVSMEAAGFSPNII--AYNTLITGYGKIFKMEAAQGLFHRLCN 377
Query: 60 YNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA 119
EP SY +++ + +A Y +K G + + I + G
Sbjct: 378 IGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDG 437
Query: 120 ALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVH 179
A++ + +M+ GC ++++ ++ + + G D+ + + + +F+ LV
Sbjct: 438 AIKTIEDMTGIGCQYSSI-LGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVM 496
Query: 180 GLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSP 239
K G V + LL + R + Y++ I G L AV
Sbjct: 497 AYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEI 556
Query: 240 DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
++ +T+I E+E+ + + G+ D ++ ++ Y K G +++A +L
Sbjct: 557 NLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVL 616
Query: 300 K 300
+
Sbjct: 617 E 617
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
++ G ++++ M + + M+ + LE AY + +YG+ ++++ + +RM
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLE-AYNTLLDAYGKDKQMEKFRSILKRMKKS 797
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
P ++YN ++NI E G+ ++ V +K+ G+G D+ +Y IK++ G A
Sbjct: 798 TSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEA 857
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGF 146
+ L++ M + V Y +V
Sbjct: 858 VGLVKEMRGRNIIPDKVTYTNLVTAL 883
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 155 ARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQ 214
A ELF ++ +++ PDV +V G E+ K+ ++L GVSPN +TY++ I+
Sbjct: 216 ALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIK 275
Query: 215 GLCREGALDR-AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQ 273
GL +G + A +L + GMSP+ TY V R+ + + E L +M G
Sbjct: 276 GLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFV 335
Query: 274 PDE 276
PDE
Sbjct: 336 PDE 338
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 31 EGAYVEAMRSY---GRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHK 87
EG EA++ + + G+ EA+++F ++ N P V ++ AI+ G + K
Sbjct: 194 EGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLK 253
Query: 88 VYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHA-ALRLLRNMSVFGCSFNAVAYCTVVAGF 146
V+MRM GV + YTY++ IK G+ H A + L M G S NA Y V F
Sbjct: 254 VFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAF 313
Query: 147 YEFGDRDLARELFDEMLERSLCPD 170
G + AREL EM + PD
Sbjct: 314 VREGKEESARELLQEMKGKGFVPD 337
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 176 KLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE 235
K+ L K G E+ +L +++ + P++ + ++ G + +
Sbjct: 202 KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLAS 261
Query: 236 GMSPDVVTYNTVICGLCRKSRV-VESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
G+SP+ TY+ +I GL + ++++ L +M+ +G+ P+ TY + + + ++G +
Sbjct: 262 GVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEES 321
Query: 295 ANRILKDAVFKGF 307
A +L++ KGF
Sbjct: 322 ARELLQEMKGKGF 334
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 12/228 (5%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
+L G E ++ +LL M + N E ++ + Y + G+ EA++VF+RM +
Sbjct: 188 LLAGYGKVGEMDEARSLLEMMPCWVRN---EVSWTCVISGYAKSGRASEAIEVFQRMLME 244
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
N EP + A+++ + G ++ + +G+ V I + ++G A
Sbjct: 245 NVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKA 304
Query: 121 LRLLRNMSVFGC--SFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
L VF C N V + T++AG G A +F+ M++ + P+ TF ++
Sbjct: 305 L------DVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAIL 358
Query: 179 HGLCKKGFVPESEKLLNKV-LKRGVSPNLFTYNIFIQGLCREGALDRA 225
G+V ++L N + K G+ PN+ Y I L R G L A
Sbjct: 359 SACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREA 406
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 10/240 (4%)
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
++ + SVH ++ + G A K++ D+ + DV + + + + G
Sbjct: 144 VFGFDSSVHVVTGLIQMYFSCGGLGDARKMF----DEMLVKDVNVWNALLAGYGKVGEMD 199
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
A LL M + N V++ V++G+ + G A E+F ML ++ PD T ++
Sbjct: 200 EARSLLEMMPCW--VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVL 257
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
G + E++ + V RG++ + N I + G + +A+ V+
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER--- 314
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
+VVT+ T+I GL E+ ++MV G++P++ T+ I+ G V R+
Sbjct: 315 -NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRL 373
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 9/235 (3%)
Query: 64 PSVHSYNAI---MNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
P+ + +N + +++L E + A VY ++ D +T+ +K R
Sbjct: 76 PNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 135
Query: 121 LRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHG 180
++ + VFG + ++ ++ G AR++FDEML + DV +N L+ G
Sbjct: 136 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK----DVNVWNALLAG 191
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPD 240
K G + E+ LL + N ++ I G + G A+ + E + PD
Sbjct: 192 YGKVGEMDEARSLLE--MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPD 249
Query: 241 VVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
VT V+ + E + + G+ N +ID Y K G + A
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKA 304
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
P++ + + + L + K Y + KG S++ +Y++ I C+ GR +
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
L+ EM + L PDV+ +N L+ CK
Sbjct: 420 LQ-----------------------------------EMKKEGLAPDVSLYNALIEACCK 444
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
+ ++KL +++ G NL TYN+ I+ L EG + ++ + G+ PD
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETI 504
Query: 244 YNTVICGLCRKSRVVESEECLHK-MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
Y ++I GLC+++++ + E K M D + + C G +A+++L++
Sbjct: 505 YMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R K + +E + + SY+ +++ L + G +++ MK +G+ DV
Sbjct: 374 RHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVS 433
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
Y I++ C+ A +L M V GC N Y ++ E G+ + + LFD+M
Sbjct: 434 LYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKM 493
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG---VSPNLFTYNIFIQGLCRE 219
LER + PD + L+ GLCK+ + + ++ K ++R V+ + + F+ LC
Sbjct: 494 LERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSE--FVLNLCSN 551
Query: 220 G 220
G
Sbjct: 552 G 552
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%)
Query: 170 DVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFL 229
++ +++ ++ LCK G V ES L ++ K G++P++ YN I+ C+ + A
Sbjct: 396 ELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLW 455
Query: 230 GSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
+ EG ++ TYN +I L + ES KM+ G++PDE Y ++I+G CK+
Sbjct: 456 DEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKE 515
Query: 290 GMVQDANRILKDAVFKGFK 308
++ A + + + + K
Sbjct: 516 TKIEAAMEVFRKCMERDHK 534
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 140/381 (36%), Gaps = 77/381 (20%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFG-KVQEAVDVFERMDL 59
+ + L R+F+ M+ L ++++ LL+ + ++ G K Q A V E +
Sbjct: 88 IFKSLSLSRQFSAMDALFKQVKSN--KILLDSSVYRSLIDTLVLGRKAQSAFWVLE--EA 143
Query: 60 YNCEPSVHS--YNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
++ +H N ++ L G ++ A K++++M+ KGV + + + I FCR+
Sbjct: 144 FSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSET 203
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDL-ARELFDEMLERSLCPDVATFNK 176
+ LRL+ + + N ++ R++ A + +E+ PD +
Sbjct: 204 NQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRV 263
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL-------------- 222
+ G + E + +L K K GV+P Y FI L L
Sbjct: 264 IAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGK 323
Query: 223 --------------------DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKS------- 255
D AV FL + G P + T + + LCR
Sbjct: 324 FPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIK 383
Query: 256 ----------------------------RVVESEECLHKMVNDGLQPDEFTYNTIIDGYC 287
RV ES L +M +GL PD YN +I+ C
Sbjct: 384 AYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACC 443
Query: 288 KKGMVQDANRILKDAVFKGFK 308
K M++ A ++ + +G K
Sbjct: 444 KAEMIRPAKKLWDEMFVEGCK 464
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 119/277 (42%), Gaps = 2/277 (0%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERM-DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y + +Y R G+ A + ERM +NC+P VH+Y+ ++ ++ F++ + M
Sbjct: 188 YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDM 247
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGR-PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
+ +G+ + TY I ++ + L++ + C ++ + + F G
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQ 307
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
++ +++ + P++ TFN L+ K G + ++ + K S + TYN+
Sbjct: 308 IEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNV 367
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
I R G L + + E + P VT +++ R S+ + L + N
Sbjct: 368 VIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSD 427
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
++ D +N ++D Y + + +L+ KGFK
Sbjct: 428 IRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFK 464
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 11/272 (4%)
Query: 32 GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMR 91
G YV+ + G+ + ++A ++F+ M C + Y A+++ G F+ A + R
Sbjct: 151 GIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLER 210
Query: 92 MKDK-GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
MK DV+TY+I IKSF + LL +M G N + Y T++ +G
Sbjct: 211 MKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA---YG 267
Query: 151 DRDLAREL---FDEMLERSLC-PDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
+ E+ +ML C PD T N + G + E K G+ PN+
Sbjct: 268 KAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNI 327
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
T+NI + + G + + + + S +VTYN VI R + + E
Sbjct: 328 RTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRL 387
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
M ++ + P T +++ Y G A++I
Sbjct: 388 MQSERIFPSCVTLCSLVRAY---GRASKADKI 416
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 5/266 (1%)
Query: 29 LLEGAYVEAMRSYGRFGKVQEAVDVFE--RMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
LL +E++ + + A+ VFE R L+ +P+V Y ++ +L + +AH
Sbjct: 112 LLPRTVLESLHERITALRWESAIQVFELLREQLW-YKPNVGIYVKLIVMLGKCKQPEKAH 170
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM-SVFGCSFNAVAYCTVVAG 145
+++ M ++G + YT + ++ R+GR AA LL M S C + Y ++
Sbjct: 171 ELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKS 230
Query: 146 FYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK-KGFVPESEKLLNKVLKRGVSP 204
F + D ++L +M + + P+ T+N L+ K K FV L+ + + P
Sbjct: 231 FLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKP 290
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL 264
+ +T N ++ G ++ G+ P++ T+N ++ + + +
Sbjct: 291 DSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVM 350
Query: 265 HKMVNDGLQPDEFTYNTIIDGYCKKG 290
M TYN +ID + + G
Sbjct: 351 EYMQKYHYSWTIVTYNVVIDAFGRAG 376
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 96/241 (39%), Gaps = 6/241 (2%)
Query: 11 FNQMENLLSEMR--ATLENNLLEGAYVEAMRSYGRFGK-VQEAVDVFERMDLYNCEPSVH 67
F+++++LLS+MR N + ++A YG+ V+ + + + +C+P
Sbjct: 237 FDKVQDLLSDMRRQGIRPNTITYNTLIDA---YGKAKMFVEMESTLIQMLGEDDCKPDSW 293
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+ N+ + G Y + + G+ ++ T+ I + S+ ++G ++ M
Sbjct: 294 TMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYM 353
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
+ S+ V Y V+ F GD LF M + P T LV +
Sbjct: 354 QKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKA 413
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
+ +L + + +L +N + R L + ++G PD +TY T+
Sbjct: 414 DKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTM 473
Query: 248 I 248
+
Sbjct: 474 V 474
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 120/275 (43%), Gaps = 43/275 (15%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYNCEP--SVHSYNAIMNILVEFGYFNQAHKVYMR 91
Y + M+ Y +EA++ +E N + S +YN ++ L E G F++A K++
Sbjct: 276 YGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDA 335
Query: 92 MKD-----KGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
+K + + ++ T+ + + +C G+ A+ + R M F CS
Sbjct: 336 VKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCS------------- 382
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNL 206
PD +FN L++ LC + E+EKL ++ ++ V P+
Sbjct: 383 ----------------------PDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDE 420
Query: 207 FTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHK 266
+TY + + +EG +D + ++ + P++ YN + L + ++ +++
Sbjct: 421 YTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDM 480
Query: 267 MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
MV+ L+ D+ Y I+ + G + + +I+ +
Sbjct: 481 MVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDE 514
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 104/249 (41%), Gaps = 18/249 (7%)
Query: 64 PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKG-VGSDVYTYTIRIKSFCRTGRPHAALR 122
P++ +YN I ++ A + Y D + + T+ I +K A+
Sbjct: 163 PNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAME 222
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLER--SLCPDVATFNKLVHG 180
+ +M+V G + V Y ++ G + D D +L+ E+ E+ D + +L+ G
Sbjct: 223 IKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKG 282
Query: 181 LCKKGFVPESEKLLNKVLKRGVSPN------LFTYNIFIQGLCREGALDRAVVFLGSVSR 234
F+ E EK + + V N YN ++ L G D A+ +V +
Sbjct: 283 Y----FMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKK 338
Query: 235 EGMSP-----DVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK 289
E P ++ T+N ++ G C + E+ E +M + PD ++N +++ C
Sbjct: 339 EHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDN 398
Query: 290 GMVQDANRI 298
++ +A ++
Sbjct: 399 ELLAEAEKL 407
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 3/271 (1%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
Y A+R R V E V + M + + +Y + + + K+Y M
Sbjct: 265 TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYM 324
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAAL--RLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
D + ++ ++ + P L R+ R G S + Y + G
Sbjct: 325 MDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 384
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
D A E+ M PD T+++LV GLCK + E+ +L+++ +G P++ T+
Sbjct: 385 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWT 444
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV-N 269
I IQG C+ LD+A+ ++ +G D + +I G ++ + L +MV N
Sbjct: 445 ILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKN 504
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
++P + TY +ID K ++A +L+
Sbjct: 505 ANVKPWQSTYKLLIDKLLKIKKSEEALDLLQ 535
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 4/242 (1%)
Query: 65 SVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLL 124
S +YNA + +L + V MK G D+ TY + F ++ ++L
Sbjct: 262 STVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLY 321
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFG---DRDLARELFDEMLERSLCPDVATFNKLVHGL 181
M + G ++ C+++ + D DL + + A ++ + L
Sbjct: 322 EYM-MDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSL 380
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
G E+E++ + G P+ TY+ + GLC+ L+ A L + +G PD+
Sbjct: 381 TSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDI 440
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
T+ +I G C+ + + ++ C M+ G D + +IDG+ + A+ L +
Sbjct: 441 KTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLME 500
Query: 302 AV 303
V
Sbjct: 501 MV 502
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 201 GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
G S + Y+ + L G D A ++ G PD +TY+ ++ GLC+ R+ E+
Sbjct: 365 GKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEA 424
Query: 261 EECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
L +M G PD T+ +I G+CK + A + + KGF
Sbjct: 425 RGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGF 471
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 7/240 (2%)
Query: 27 NNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAH 86
+L + Y RS G+ EA ++ + M EP +Y+ ++ L + +A
Sbjct: 366 KSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEAR 425
Query: 87 KVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGF 146
V +M+ +G D+ T+TI I+ C+ AL NM G ++ ++ GF
Sbjct: 426 GVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGF 485
Query: 147 YEFGDRDLARELFDEMLERS-LCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPN 205
+ A EM++ + + P +T+ L+ L K + +SE+ L+ +L+ N
Sbjct: 486 VIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLK---IKKSEEALD-LLQMMKKQN 541
Query: 206 LFTYNIFIQG-LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL 264
Y G L + G L+ A FL +S + SP Y VI R+ R+ +++ L
Sbjct: 542 YPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREGRLTDAKNLL 600
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 121/264 (45%), Gaps = 13/264 (4%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK A+ + M+L N + +++N + G A V+ RM +K DV T+
Sbjct: 293 GKQSHAIAIVNGMELDNILGT-----SLLNFYCKVGLIEYAEMVFDRMFEK----DVVTW 343
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
+ I + + G A+ + + M + ++ V T+++ + L +E+ +
Sbjct: 344 NLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR 403
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
S D+ + ++ K G + +++K+ + +++ +L +N + G
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGE 459
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A+ + EG+ P+V+T+N +I L R +V E+++ +M + G+ P+ ++ T+++
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Query: 285 GYCKKGMVQDANRILKDAVFKGFK 308
G + G ++A L+ G +
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLR 543
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 115/242 (47%), Gaps = 16/242 (6%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + G ++ A VF+RM E V ++N I++ V+ G A + M+ + + D
Sbjct: 319 YCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYD 374
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGC--SFNA--VAYCTVVAGFYEFGDRDLAR 156
T + + RT L+L + + + SF + V TV+ + + G A+
Sbjct: 375 CVTLATLMSAAARTEN----LKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
++FD +E+ D+ +N L+ + G E+ +L + GV PN+ T+N+ I L
Sbjct: 431 KVFDSTVEK----DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL 486
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
R G +D A + G+ P+++++ T++ G+ + E+ L KM GL+P+
Sbjct: 487 LRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNA 546
Query: 277 FT 278
F+
Sbjct: 547 FS 548
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 102/268 (38%), Gaps = 36/268 (13%)
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
+ +M++ + G A KV+ D V D+ + + ++ +G ALRL M +
Sbjct: 414 STVMDMYAKCGSIVDAKKVF----DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPE 189
G N + + ++ G D A+++F +M + P++ ++ +++G+ + G E
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 529
Query: 190 SEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI- 248
+ L K+ + G+ PN F+ + + +L G + R +V+ T +
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589
Query: 249 -----CGLCRKSRVV--------------------------ESEECLHKMVNDGLQPDEF 277
CG K+ V E+ + GL+PD
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 649
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFK 305
T ++ G + A I D V K
Sbjct: 650 TITNVLSACNHAGDINQAIEIFTDIVSK 677
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 150 GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTY 209
G D A ++FDE+ +R + +N L+ G + G E+ +L + + K+GV P T
Sbjct: 222 GVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTV 277
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
+ + G ++ GM D + +++ C+ + +E +M
Sbjct: 278 STCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM-- 335
Query: 270 DGLQPDEFTYNTIIDGYCKKGMVQDA 295
+ D T+N II GY ++G+V+DA
Sbjct: 336 --FEKDVVTWNLIISGYVQQGLVEDA 359
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/299 (18%), Positives = 120/299 (40%), Gaps = 37/299 (12%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R G+V EA D+F +M P++ S+ +MN +V+ G +A +M++ G+ + +
Sbjct: 488 RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF 547
Query: 103 TYTIRIKSFCRTGRPHAA-------LRLLRNMSVFGCSFNAV---AYC------------ 140
+ T+ + + H +R L++ S+ + V A C
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Query: 141 ----------TVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
+++ + +G+ A L+ + L PD T ++ G + ++
Sbjct: 608 KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQA 667
Query: 191 EKLLNKVL-KRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
++ ++ KR + P L Y + + L G ++A+ + + PD +++
Sbjct: 668 IEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP---FKPDARMIQSLVA 724
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
C K R E + L + + + + Y TI + Y +G + ++ + KG K
Sbjct: 725 S-CNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLK 782
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 1 MLQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEA---MRSYGRFGKVQEAVDVFERM 57
++ G ++ ++L+EM+A E + ++ ++ M++ G+V+ A +V++ +
Sbjct: 578 LISACGQSGAVDRAFDVLAEMKA--ETHPIDPDHISIGALMKACCNAGQVERAKEVYQMI 635
Query: 58 DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRP 117
Y + Y +N + G ++ A +Y MK+K V D ++ I
Sbjct: 636 HKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKML 695
Query: 118 HAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
A +L++ G ++Y +++ D A EL++++ L P ++T N L
Sbjct: 696 DEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNAL 755
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ LC+ +P++ + L+++ G+ PN TY++ + R+ + + L +G+
Sbjct: 756 ITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGV 815
Query: 238 SPDVVTYNTVICGLCRK 254
SP+++ I LC++
Sbjct: 816 SPNLIMCR-CITSLCKR 831
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 120/276 (43%), Gaps = 12/276 (4%)
Query: 11 FNQMENLLSEMRATLENNLLE-GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSY 69
F+QM N + +E NL GA ++ R G+V +A + + N +P +
Sbjct: 525 FHQMSN------SGVEANLHTFGALIDGC---ARAGQVAKAFGAYGILRSKNVKPDRVVF 575
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDK--GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
NA+++ + G ++A V MK + + D + +K+ C G+ A + + +
Sbjct: 576 NALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMI 635
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
+G Y V + GD D A ++ +M E+ + PD F+ L+ +
Sbjct: 636 HKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKML 695
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
E+ +L +G+ +Y+ + C +A+ + + P + T N +
Sbjct: 696 DEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNAL 755
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
I LC +++ ++ E L ++ GL+P+ TY+ ++
Sbjct: 756 ITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 6/238 (2%)
Query: 42 GRFGKVQEAVDVFERM--DLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
G+ G V A DV M + + +P S A+M G +A +VY + G+
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTV--VAGFYEFGDRDLARE 157
YTI + S ++G A + ++M + + V + + VAG + D
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFG-- 700
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+ + + + +++ L+ C ++ +L K+ + P + T N I LC
Sbjct: 701 ILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALC 760
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
L +A+ +L + G+ P+ +TY+ ++ RK S + L + DG+ P+
Sbjct: 761 EGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 37/223 (16%)
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
+LR + G + + Y T+++ + G D E+F +M + ++ TF L+ G
Sbjct: 489 VLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCA 548
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE--GMSPD 240
+ G V ++ + + V P+ +N I + GA+DRA L + E + PD
Sbjct: 549 RAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPD 608
Query: 241 VVTYNTVICGLCRKSRVVESEEC---LHK------------------------------- 266
++ ++ C +V ++E +HK
Sbjct: 609 HISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYK 668
Query: 267 -MVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
M + PDE ++ +ID M+ +A IL+DA +G +
Sbjct: 669 DMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 711
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 15/271 (5%)
Query: 34 YVEAMRSYGRFGKVQEAVDVFERMDLYN-CEPSVHSYNAIMNILVEFGYFNQA------- 85
Y + + R G + A D+ + + N C P + N+L G N
Sbjct: 73 YTNLVEKFTRDGNLSGAYDLLQSLQEKNICLP----ISVFKNLLAAAGELNDMKLSCRVF 128
Query: 86 HKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAG 145
+V + + + SD Y R +F T LL+ +S + + ++
Sbjct: 129 REVLILPGKEPLSSDCYLNLAR--AFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFA 186
Query: 146 FYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR-GVSP 204
F E D + EM E PDV T+N ++ L + G V E +L+ + + VS
Sbjct: 187 FAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSV 246
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL 264
N+ TYN + G+ + D +V + + G+ PD+++Y VI L R V ES
Sbjct: 247 NIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLF 306
Query: 265 HKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+M ++P + Y +ID K G Q A
Sbjct: 307 DEMKQRQIRPSVYVYRALIDCLKKSGDFQSA 337
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 72 IMN-ILVEFGYFNQAHKVYM---RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
+MN I+ F Q KV M MK+ DV TY + R G + L +L M
Sbjct: 179 VMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTM 238
Query: 128 SV-FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGF 186
S N + Y TV+ G + D+ +++EM++ + PD+ ++ ++ L + G
Sbjct: 239 KEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGN 298
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAV 226
V ES +L +++ +R + P+++ Y I L + G A+
Sbjct: 299 VKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSAL 338
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 139 YCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVL 198
Y + F D L E+ E SL + N+++ + + + +L ++
Sbjct: 145 YLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMK 204
Query: 199 KRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE-GMSPDVVTYNTVICGLCRKSRV 257
+ P++ TYN + L R G ++ + L ++ + +S +++TYNTV+ G+ + R
Sbjct: 205 EWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRF 264
Query: 258 VESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
++MV G++PD +Y +ID + G V+++ R+ +
Sbjct: 265 DMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDE 308
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 122/303 (40%), Gaps = 37/303 (12%)
Query: 32 GAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV--- 88
++ + Y R G++++A ++F M E + S+NA+++ +E G +A
Sbjct: 156 ASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFKV 211
Query: 89 ---------------YMR----------MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRL 123
YM+ KD V ++ T+ I + RP L+L
Sbjct: 212 APVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKL 271
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
R M G N+ + + G E L R++ + + +LC DV L+ CK
Sbjct: 272 FRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 331
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
G + ++ KL + K+ V +N I G + G D+A+ + + PD +T
Sbjct: 332 CGELGDAWKLFEVMKKKDV----VAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Query: 244 YNTVICGLCRKSRVVESEECLHKMVND-GLQPDEFTYNTIIDGYCKKGMVQDANRILKDA 302
+ V+ V MV D ++P Y ++D + G +++A ++++
Sbjct: 388 FVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Query: 303 VFK 305
F+
Sbjct: 448 PFR 450
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 111/256 (43%), Gaps = 22/256 (8%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R G + A+ VF M N ++ + ++ I + +AH+++ D+ D +
Sbjct: 73 RSGDIDGALRVFHGMRAKN---TITWNSLLIGISKDPSRMMEAHQLF----DEIPEPDTF 125
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
+Y I + + R A M +A ++ T++ G+ G+ + ARELF M
Sbjct: 126 SYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARELFYSM 181
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
+E+ + ++N ++ G + G + ++ RGV + I G + +
Sbjct: 182 MEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKKV 233
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTI 282
+ A ++ ++ ++VT+N +I G SR + + M+ +G++P+ ++
Sbjct: 234 ELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSA 290
Query: 283 IDGYCKKGMVQDANRI 298
+ G + +Q +I
Sbjct: 291 LLGCSELSALQLGRQI 306
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM-S 128
N ++++ V+F + AHKV+ M ++ ++ T+T + + G+P+ A+ L R M
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSER----NIVTWTTMVSGYTSDGKPNKAIELYRRMLD 99
Query: 129 VFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVP 188
+ N Y V+ GD L +++ + + +L DV N +V K G +
Sbjct: 100 SEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLI 159
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
E+ ++L+ P+ ++N I G C+ G +D AV + + P+VV++N +I
Sbjct: 160 EANSSFKEILR----PSSTSWNTLISGYCKAGLMDEAVTLFHRMPQ----PNVVSWNCLI 211
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFT 278
G K + E L +M +GL D F
Sbjct: 212 SGFVDKGS-PRALEFLVRMQREGLVLDGFA 240
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 9/166 (5%)
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
G S N V++ + +F A ++FDEM ER ++ T+ +V G G ++
Sbjct: 35 GISQNVFIANNVISMYVDFRLLSDAHKVFDEMSER----NIVTWTTMVSGYTSDGKPNKA 90
Query: 191 EKLLNKVL-KRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
+L ++L + N F Y+ ++ G + ++ + +E + DVV N+V+
Sbjct: 91 IELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVD 150
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+ R++E+ ++ L+P ++NT+I GYCK G++ +A
Sbjct: 151 MYVKNGRLIEANSSFKEI----LRPSSTSWNTLISGYCKAGLMDEA 192
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 55/235 (23%)
Query: 74 NILVEF----GYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSV 129
+ILV+ G AHK++ R+ +K D+ ++ I+ ++G A L R +
Sbjct: 381 SILVDLHANVGNIQDAHKLFHRLPNK----DIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
Query: 130 FGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVAT--FNKLVHGLC-KKGF 186
G + ++ +C +A+ + K +HGLC KKG+
Sbjct: 437 LGLDADQFIVSNIL----------------------KVCSSLASLGWGKQIHGLCIKKGY 474
Query: 187 VPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVV-FLGSVSREGMSPDVVTYN 245
ESE + T + + G +D VV F G + R DVV++
Sbjct: 475 --ESEPV--------------TATALVDMYVKCGEIDNGVVLFDGMLER-----DVVSWT 513
Query: 246 TVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
+I G + RV E+ HKM+N G++P++ T+ ++ G++++A L+
Sbjct: 514 GIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLE 568
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 99/242 (40%)
Query: 45 GKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTY 104
GK +EA + N E YN ++ ++E G A ++Y RM GV + TY
Sbjct: 753 GKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTY 812
Query: 105 TIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLE 164
I + R + A+ + N G + Y ++ + + G A LF EM +
Sbjct: 813 NTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQK 872
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
+ + P ++N +V E ++LL + + G +L TY IQ
Sbjct: 873 KGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAE 932
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
A + V +G+ +++++ L + + E+E KM G+ PD TI+
Sbjct: 933 AEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILK 992
Query: 285 GY 286
GY
Sbjct: 993 GY 994
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 2/259 (0%)
Query: 40 SYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGS 99
+Y R G +++A +F C+P + + ++N L G +A + +K +
Sbjct: 713 AYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIEL 772
Query: 100 DVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELF 159
D Y IK+ G+ A + M G + Y T+++ + D A E+F
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIF 832
Query: 160 DEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCRE 219
L D + ++ K G + E+ L +++ K+G+ P +YN+ ++ +C
Sbjct: 833 SNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICAT 891
Query: 220 GALDRAV-VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFT 278
L V L ++ R G D+ TY T+I S+ E+E+ + + G+
Sbjct: 892 SRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSH 951
Query: 279 YNTIIDGYCKKGMVQDANR 297
+++++ K GM+++A R
Sbjct: 952 FSSLLSALVKAGMMEEAER 970
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 9/216 (4%)
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
V YTI ++ + + G+ A M GC +AVA T++ + +G +
Sbjct: 188 VVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYK 247
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+ ER + + +N ++ L KK F + L ++++ GV PN FTY + + ++G
Sbjct: 248 AVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQG 307
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
+ A+ G + G P+ VTY++VI + ++ M + G+ P +T
Sbjct: 308 FKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCA 367
Query: 281 TIIDGYCKKGMVQDA---------NRILKDAVFKGF 307
T++ Y K A N+I D V +G
Sbjct: 368 TMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 119/296 (40%), Gaps = 10/296 (3%)
Query: 2 LQKLGHHREFNQMENLLSEMRATLEN---NLLEGAYVEAMRSYGRFGKVQEAVDVFERMD 58
L G HRE + E L+ N L A +EA GK+Q A +++ERM
Sbjct: 749 LTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEA-------GKLQCASEIYERMH 801
Query: 59 LYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPH 118
S+ +YN ++++ ++A +++ + G+ D YT I + + G+
Sbjct: 802 TSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMS 861
Query: 119 AALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLV 178
AL L M G +Y +V EL M C D++T+ L+
Sbjct: 862 EALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLI 921
Query: 179 HGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
+ E+EK + V ++G+ + ++ + L + G ++ A +S G+S
Sbjct: 922 QVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGIS 981
Query: 239 PDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
PD T++ G + KM+ ++ D F + + D Y G QD
Sbjct: 982 PDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAVGKEQD 1037
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 115/271 (42%), Gaps = 9/271 (3%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCE---PSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
YGR K++EA +R+ L E P ++++ V G+ A+ ++M +KG
Sbjct: 680 YGRQHKLKEA----KRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGC 735
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
T +I + + G+ A + R + V Y T++ E G A E
Sbjct: 736 DPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASE 795
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+++ M + + T+N ++ + + ++ ++ + + G+ + Y I
Sbjct: 796 IYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYG 855
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVV-ESEECLHKMVNDGLQPDE 276
+ G + A+ + ++G+ P +YN ++ +C SR+ E +E L M +G D
Sbjct: 856 KGGKMSEALSLFSEMQKKGIKPGTPSYNMMV-KICATSRLHHEVDELLQAMERNGRCTDL 914
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
TY T+I Y + +A + + KG
Sbjct: 915 STYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 122/269 (45%), Gaps = 1/269 (0%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYM 90
E Y + SY + G +EA+ F M P +Y++++++ V+ G + +A +Y
Sbjct: 293 EFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYE 352
Query: 91 RMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
M+ +G+ YT + + +T AL L +M + V ++ + + G
Sbjct: 353 DMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLG 412
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
A+ +F+E +L D T+ + G V ++ ++ + R + + F Y
Sbjct: 413 LFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYI 472
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
+ +Q + +D A ++S+ G+ PD + N ++ R + +++ + +++ D
Sbjct: 473 VMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVD 531
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
+ D Y T + YCK+GMV +A ++
Sbjct: 532 QVHFDIELYKTAMRVYCKEGMVAEAQDLI 560
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 118/319 (36%), Gaps = 35/319 (10%)
Query: 5 LGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEP 64
L R + Q+ + S M+ L Y +R YG+ GK++ A + F M CEP
Sbjct: 162 LKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEP 221
Query: 65 -----------------------------------SVHSYNAIMNILVEFGYFNQAHKVY 89
S YN +++ L + + + ++
Sbjct: 222 DAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLW 281
Query: 90 MRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF 149
+ M ++GV + +TYT+ + S+ + G AL+ M G V Y +V++ +
Sbjct: 282 LEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKA 341
Query: 150 GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTY 209
GD + A L+++M + + P T ++ K P++ L + + + +
Sbjct: 342 GDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIR 401
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
+ I+ + G A R + D TY + VV++ + + M
Sbjct: 402 GLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKT 461
Query: 270 DGLQPDEFTYNTIIDGYCK 288
+ F Y ++ Y K
Sbjct: 462 RDIPLSRFAYIVMLQCYAK 480
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 116/279 (41%), Gaps = 17/279 (6%)
Query: 15 ENLLSEMRATL----ENNLLEGAYVEAMRSYGRFGKVQEA---VDVFERMDLYNCEPSVH 67
E L+E +A L + +L A + S+ R G V +A D+ R+ L E ++
Sbjct: 615 EGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIA 674
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRM-KDKGVGSDVYTYTIR--IKSFCRTGRPHAALRLL 124
+ A+ +A ++Y+ + K G V IR I ++ R G A L
Sbjct: 675 TLIAVYG---RQHKLKEAKRLYLAAGESKTPGKSV----IRSMIDAYVRCGWLEDAYGLF 727
Query: 125 RNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKK 184
+ GC AV +V G A + LE+++ D +N L+ + +
Sbjct: 728 MESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEA 787
Query: 185 GFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTY 244
G + + ++ ++ GV ++ TYN I R LD+A+ + R G+ D Y
Sbjct: 788 GKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIY 847
Query: 245 NTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
+I + ++ E+ +M G++P +YN ++
Sbjct: 848 TNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%)
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
LF E E+ P T + LV+ L +G E+E + L++ + + YN I+ +
Sbjct: 726 LFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAML 785
Query: 218 REGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEF 277
G L A + G+ + TYNT+I R ++ ++ E GL DE
Sbjct: 786 EAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEK 845
Query: 278 TYNTIIDGYCKKGMVQDANRILKDAVFKGFK 308
Y +I Y K G + +A + + KG K
Sbjct: 846 IYTNMIMHYGKGGKMSEALSLFSEMQKKGIK 876
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Query: 156 RELFDEM-LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQ 214
R+ F M L+ S P V + ++ + G + +E+ ++L+ G P+ +
Sbjct: 172 RDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLC 231
Query: 215 GLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQP 274
R G + F +V + YN ++ L +KS + + +MV +G+ P
Sbjct: 232 TYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPP 291
Query: 275 DEFTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
+EFTY ++ Y K+G ++A + + GF
Sbjct: 292 NEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGF 324
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 119/273 (43%), Gaps = 23/273 (8%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
M YG+ G V E +FE ++ E SV S+ +++ +V++ + +V+ M ++
Sbjct: 153 MDMYGKCGLVSEVKRIFEELE----EKSVVSWTVVLDTVVKWEGLERGREVFHEMPER-- 206
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCS--FNAVAYCTVVAGFYEFGDRDLA 155
+ +T+ + + G L LL M VF C N V C++++ + G+ +
Sbjct: 207 --NAVAWTVMVAGYLGAGFTREVLELLAEM-VFRCGHGLNFVTLCSMLSACAQSGNLVVG 263
Query: 156 R-----ELFDEML--ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFT 208
R L EM+ E + DV LV K G + S + + KR N+ T
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR----NVVT 319
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV 268
+N GL G + + RE + PD +T+ V+ V E C H +
Sbjct: 320 WNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR 378
Query: 269 NDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
GL+P Y ++D + G++++A ++++
Sbjct: 379 FYGLEPKVDHYACMVDLLGRAGLIEEAEILMRE 411
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 16/248 (6%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + G ++A+ +F M P+ + I++ + G + V+ ++ S
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+Y T I + + G A RL M+ N V + T+++G+ G A +F
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMT----KKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR-GVSPNLFTYNIFIQGLCRE 219
EML + P TF +++ G V E +++ N ++ R G P++ Y + L R
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG---LQPDE 276
G L RA+ F+ ++S E P + T++ G CR + + L + V++ L PD
Sbjct: 571 GHLQRALQFIEAMSIE---PGSSVWETLL-GACR----IHKDTNLARTVSEKLFELDPDN 622
Query: 277 FTYNTIID 284
Y+ ++
Sbjct: 623 VGYHVLLS 630
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 39/205 (19%)
Query: 136 AVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLN 195
+ A TV + E + AR+LFDE E+SL ++N ++ G + G ++ L
Sbjct: 357 STALTTVYSKLNEI---ESARKLFDESPEKSL----PSWNAMISGYTQNGLTEDAISLFR 409
Query: 196 KVLKRGVSPNLFTYNIFIQGLCREGALD---------RAVVFLGSV----SREGM----- 237
++ K SPN T + + GAL R+ F S+ + GM
Sbjct: 410 EMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 238 -------------SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIID 284
+ VT+NT+I G + E+ ++M+N G+ P T+ ++
Sbjct: 470 SIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLY 529
Query: 285 GYCKKGMVQDANRILKDAVFK-GFK 308
G+V++ + I + + GF+
Sbjct: 530 ACSHAGLVKEGDEIFNSMIHRYGFE 554
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 132/285 (46%), Gaps = 20/285 (7%)
Query: 8 HREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVH 67
+RE +Q+ L+S M LE +L G + +M Y + G + EA VF M + SV
Sbjct: 291 YREGSQIHGLVSRM--PLEFDLFLGNSLMSM--YSKLGYMGEAKAVFGVM---KNKDSV- 342
Query: 68 SYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
S+N+++ LV+ ++A++++ +M G D+ ++T IK F G + L M
Sbjct: 343 SWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVELFGMM 398
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
+ + + +++ F G + A F +ML++ +CP+ TF+ ++ +
Sbjct: 399 P----EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV 247
E ++ +V+K + +L N + C+ G + A +S P++V+YNT+
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNIVSYNTM 510
Query: 248 ICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
I G ++ + + + G +P+ T+ ++ G V
Sbjct: 511 ISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYV 555
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 115/264 (43%), Gaps = 19/264 (7%)
Query: 36 EAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDK 95
+A R + R+ + + + RM L E + N++M++ + GY +A V+ MK+K
Sbjct: 283 KACRDFVRYREGSQIHGLVSRMPL---EFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK 339
Query: 96 GVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLA 155
D ++ I + + A L M + V++ ++ GF G+
Sbjct: 340 ----DSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKC 391
Query: 156 RELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQG 215
ELF M E+ D T+ ++ G+ E+ +K+L++ V PN +T++ +
Sbjct: 392 VELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Query: 216 LCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPD 275
L + G V + + D+ N+++ C+ ++ +K+ + +P+
Sbjct: 448 TASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA----YKIFSCISEPN 503
Query: 276 EFTYNTIIDGYCKKGMVQDANRIL 299
+YNT+I GY G + A ++
Sbjct: 504 IVSYNTMISGYSYNGFGKKALKLF 527
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGY-FNQAHKVYMR 91
+++ + +Y GK+ +A VF+ M + SYNA++ +++ +A++++
Sbjct: 83 SWIAMISAYAENGKMSKAWQVFDEMPVR----VTTSYNAMITAMIKNKCDLGKAYELFCD 138
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSF-NAVAYCTVVAGFYEFG 150
+ +K + +Y I F R GR A L V F ++VA +++G+ G
Sbjct: 139 IPEK----NAVSYATMITGFVRAGRFDEAEFLYAETPV---KFRDSVASNVLLSGYLRAG 191
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
+ A +F M + +V + + +VHG CK G + ++ L +++ +R N+ T+
Sbjct: 192 KWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWT 243
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDV-VTYNT--VICGLCRKSRVVESEECLHKM 267
I G + G + + +EG DV V NT V+ CR +H +
Sbjct: 244 AMIDGYFKAGFFEDGFGLFLRMRQEG---DVKVNSNTLAVMFKACRDFVRYREGSQIHGL 300
Query: 268 VND-GLQPDEFTYNTIIDGYCKKGMVQDANRIL-----KDAV 303
V+ L+ D F N+++ Y K G + +A + KD+V
Sbjct: 301 VSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSV 342
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 20/264 (7%)
Query: 50 AVDVFERMDLYNC------EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYT 103
A F+R+DL EP+V YNA+ V + ++ ++Y+RM V YT
Sbjct: 814 ACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYT 873
Query: 104 YTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEML 163
Y+ +K+ R +L+ ++ FG F+ T++ + G AR++FDEM
Sbjct: 874 YSSLVKASSFASRFGESLQ--AHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMP 931
Query: 164 ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALD 223
ER D+A + +V + + + L N++ ++ N T N I G G L+
Sbjct: 932 ERD---DIA-WTTMVSAYRRVLDMDSANSLANQMSEK----NEATSNCLINGYMGLGNLE 983
Query: 224 RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTII 283
+A + + D++++ T+I G + R E+ +KM+ +G+ PDE T +T+I
Sbjct: 984 QAESLFNQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 284 DGYCKKGMVQDANRILKDAVFKGF 307
G+++ + + GF
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGF 1063
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 113/274 (41%), Gaps = 13/274 (4%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
A+ + +Y R + A + +M N S N ++N + G QA ++ +M
Sbjct: 937 AWTTMVSAYRRVLDMDSANSLANQMSEKNEATS----NCLINGYMGLGNLEQAESLFNQM 992
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K D+ ++T IK + + R A+ + M G + V TV++ G
Sbjct: 993 PVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVL 1048
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIF 212
++ +E+ L+ DV + LV K G + + + + K+ NLF +N
Sbjct: 1049 EIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWNSI 1104
Query: 213 IQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND-G 271
I+GL G A+ + E + P+ VT+ +V V E M++D
Sbjct: 1105 IEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYS 1164
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFK 305
+ + Y ++ + K G++ +A ++ + F+
Sbjct: 1165 IVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE 1198
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 125/303 (41%), Gaps = 44/303 (14%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVY--MRMKDK 95
+R R KV+ A+++F+ M +P+ H+ N+ ++ L+ G +A V+ MR K+
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKEN 173
Query: 96 GVGSDVYTYTIRIKSFCRTGRPHAALRLLR-----------------NMSVFGCSF---- 134
G +TY++ +K+ +ALR+ R N ++ C
Sbjct: 174 VTG---HTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNV 230
Query: 135 -----------------NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKL 177
+ Y +V+ F G +LA +++DEM+ + +
Sbjct: 231 YETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAM 290
Query: 178 VHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGM 237
+ K+ + K+ +LK+G+ PNL N I L + G + + G
Sbjct: 291 ISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGH 350
Query: 238 SPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL-QPDEFTYNTIIDGYCKKGMVQDAN 296
PD T+N ++ L + +R + + + ++ L +E+ YNT + K G + A
Sbjct: 351 KPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAV 410
Query: 297 RIL 299
++L
Sbjct: 411 KLL 413
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 108/251 (43%), Gaps = 10/251 (3%)
Query: 28 NLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHK 87
+L E A + + + K A+ +F+ M +P++ + N ++N L + G K
Sbjct: 281 SLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFK 340
Query: 88 VYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNM-SVFGCSFNAVAYCTVVAGF 146
VY +K G D YT+ + + + R L+L + S C N Y T +
Sbjct: 341 VYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSC 400
Query: 147 YEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL-NKVLKRGVSPN 205
+ G + A +L EM L +++N LV C+K + L+ + +R PN
Sbjct: 401 QKLGYWEKAVKLLYEMEGSGLTVSTSSYN-LVISACEKSRKSKVALLVYEHMAQRDCKPN 459
Query: 206 LFTYNIFIQGLCREGAL-DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL 264
FTY ++ C G+L D L V PDV YN I G+C + ++E
Sbjct: 460 TFTYLSLVRS-CIWGSLWDEVEDILKKVE-----PDVSLYNAAIHGMCLRREFKFAKELY 513
Query: 265 HKMVNDGLQPD 275
KM GL+PD
Sbjct: 514 VKMREMGLEPD 524
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 110/286 (38%), Gaps = 68/286 (23%)
Query: 69 YNAIMNILVEFGYFNQAHKVYMRMKDKG-VGSDVYTYTIRIKSFCRTGRPHAALRLLRNM 127
YN +++ + +++ MK G +G+++ TY++ + F R GR AL + M
Sbjct: 217 YNTAISLCGRINNVYETERIWRVMKGDGHIGTEI-TYSLLVSIFVRCGRSELALDVYDEM 275
Query: 128 SVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFV 187
S A +++ + DLA ++F ML++ + P++ N L++ L K G V
Sbjct: 276 VNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKV 335
Query: 188 PESEKLLNKVLKRGVSPNLFTYNIFIQGL------------------------------- 216
K+ + + G P+ +T+N + L
Sbjct: 336 GLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNT 395
Query: 217 ----CRE-GALDRAVVFLGSVSREGMSPDVVTYNTVI--CGLCRKSRV-------VESEE 262
C++ G ++AV L + G++ +YN VI C RKS+V + +
Sbjct: 396 AMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRD 455
Query: 263 C------------------LHKMVNDGL---QPDEFTYNTIIDGYC 287
C L V D L +PD YN I G C
Sbjct: 456 CKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAAIHGMC 501
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 87/186 (46%), Gaps = 11/186 (5%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
A + A+ R+ V + D+ +L C + + YN M + GY+ +A K+ M
Sbjct: 359 ALLTALYKANRYEDVLQLFDMIRSENL--CCLNEYLYNTAMVSCQKLGYWEKAVKLLYEM 416
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
+ G+ +Y + I + ++ + AL + +M+ C N Y ++V
Sbjct: 417 EGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSC------ 470
Query: 153 DLARELFDEM--LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYN 210
+ L+DE+ + + + PDV+ +N +HG+C + +++L K+ + G+ P+ T
Sbjct: 471 -IWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRA 529
Query: 211 IFIQGL 216
+ +Q L
Sbjct: 530 MMLQNL 535
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 116/270 (42%), Gaps = 13/270 (4%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
A+ + + + G + EA+ +F RM+ + P+ + ++ + G ++
Sbjct: 410 AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYS 469
Query: 93 KDKG--VGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFG 150
G S V+ T + + + G P +A + + N + + ++ G+ + G
Sbjct: 470 VKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE----EKNTITWSAMIGGYGKQG 525
Query: 151 DRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR-GVSPNLFTY 209
D + ELF+EML++ P+ +TF ++ G V E +K + + K +P+ Y
Sbjct: 526 DTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHY 585
Query: 210 NIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVN 269
+ L R G L++A L + + + PDV + + G SR E + KM++
Sbjct: 586 TCMVDMLARAGELEQA---LDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD 642
Query: 270 DGLQPDEFTYNTIIDG-YCKKGMVQDANRI 298
L PD+ +Y ++ Y G A +
Sbjct: 643 --LHPDDASYYVLVSNLYASDGRWNQAKEV 670
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 23/235 (9%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV---YMRMKDKGV 97
Y GK++EA +FER+ EP + ++N ++ + +V +MRM+ V
Sbjct: 160 YANCGKLREARSLFERIR----EPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---V 212
Query: 98 GSDVYTYTIRIKSFCRTGR----PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRD 153
+ + IKS G A + +L+N + N +++ + + G
Sbjct: 213 RPNELSLVALIKSCANLGEFVRGVWAHVYVLKN----NLTLNQFVGTSLIDLYSKCGCLS 268
Query: 154 LARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFI 213
AR++FDEM +R DV+ +N ++ GL GF E +L ++ +G+ P+ T+ + I
Sbjct: 269 FARKVFDEMSQR----DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTI 324
Query: 214 QGLCREGALDRAVVFLGSV-SREGMSPDVVTYNTVICGLCRKSRVVESEECLHKM 267
G +D + S+ + G+ P V Y ++ L R R+ E+EEC+ KM
Sbjct: 325 SACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM 379
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%)
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
A+++ L + G +A K++ M+DKG +V YT +++FC+ + A R+ R M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
G + NA +Y +V G Y D A EMLE P+V TF +LV LC+ V ++
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
+ ++ + ++G + N+ F+ +L +F
Sbjct: 256 QSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIF 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 117 PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNK 176
P + + + M G NAVA ++ G + G A +LF M ++ P+V +
Sbjct: 115 PEDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
+V CK + +++++ K+ G++PN F+Y + +QGL LD AV F + G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
SP+V T+ ++ LCR V +++ + + G
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
+S+++ K+ + G+ PN + GLC++G + A+ G + +G P+VV Y V+
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
C+ ++ +++ KM N+G+ P+ F+Y ++ G M+ DA
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDA 220
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
E+F +M E L P+ ++ GLCK G V E+ KL + +G P + Y ++
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
C+ ++ A + G++P+ +Y ++ GL + + ++ +M+ G P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
T+ ++D C+ V+ A + KGF
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 85 AHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA 144
+ +++ +MK+ G+ + + C+ G A++L M G V Y VV
Sbjct: 118 SDEIFKKMKEGGL---IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 145 GFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP 204
F + + A+ +F +M + P+ ++ LV GL + ++ +++L+ G SP
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSP 234
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
N+ T+ + LCR +++A + +++++G +
Sbjct: 235 NVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%)
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
A+++ L + G +A K++ M+DKG +V YT +++FC+ + A R+ R M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
G + NA +Y +V G Y D A EMLE P+V TF +LV LC+ V ++
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 191 EKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVF 228
+ ++ + ++G + N+ F+ +L +F
Sbjct: 256 QSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIF 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 117 PHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNK 176
P + + + M G NAVA ++ G + G A +LF M ++ P+V +
Sbjct: 115 PEDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 177 LVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREG 236
+V CK + +++++ K+ G++PN F+Y + +QGL LD AV F + G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGL 272
SP+V T+ ++ LCR V +++ + + G
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 189 ESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVI 248
+S+++ K+ + G+ PN + GLC++G + A+ G + +G P+VV Y V+
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
C+ ++ +++ KM N+G+ P+ F+Y ++ G M+ DA
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDA 220
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 157 ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGL 216
E+F +M E L P+ ++ GLCK G V E+ KL + +G P + Y ++
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 217 CREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDE 276
C+ ++ A + G++P+ +Y ++ GL + + ++ +M+ G P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 277 FTYNTIIDGYCKKGMVQDANRILKDAVFKGF 307
T+ ++D C+ V+ A + KGF
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 85 AHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA 144
+ +++ +MK+ G+ + + C+ G A++L M G V Y VV
Sbjct: 118 SDEIFKKMKEGGL---IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 145 GFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP 204
F + + A+ +F +M + P+ ++ LV GL + ++ +++L+ G SP
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSP 234
Query: 205 NLFTYNIFIQGLCREGALDRAVVFLGSVSREGMS 238
N+ T+ + LCR +++A + +++++G +
Sbjct: 235 NVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 119/265 (44%), Gaps = 15/265 (5%)
Query: 38 MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGV 97
+R+Y + A+ VF M L P +S+ ++ F F + +++ G+
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGL 171
Query: 98 GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARE 157
+DV+ + + R+G A ++L M V +AV++ ++++ + E G D AR
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPV----RDAVSWNSLLSAYLEKGLVDEARA 227
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
LFDEM ER +V ++N ++ G G V E++++ + + R V ++N +
Sbjct: 228 LFDEMEER----NVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV----VSWNAMVTAYA 279
Query: 218 REGALDRAV-VFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND-GLQPD 275
G + + VF + PD T +V+ C + E +H ++ G++ +
Sbjct: 280 HVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSA-CASLGSLSQGEWVHVYIDKHGIEIE 338
Query: 276 EFTYNTIIDGYCKKGMVQDANRILK 300
F ++D Y K G + A + +
Sbjct: 339 GFLATALVDMYSKCGKIDKALEVFR 363
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 25/291 (8%)
Query: 17 LLSEMRATLENNLLEGAYVEA----MRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAI 72
L+ E RA + +E VE+ + Y G V+EA +VF+ M + + V S+NA+
Sbjct: 221 LVDEARALFDE--MEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRD----VVSWNAM 274
Query: 73 MNILVEFGYFNQAHKVYMRMKDKGV-GSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFG 131
+ G +N+ +V+ +M D D +T + + G + + G
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHG 334
Query: 132 CSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESE 191
+V + + G D A E+F +R DV+T+N ++ L G ++
Sbjct: 335 IEIEGFLATALVDMYSKCGKIDKALEVFRATSKR----DVSTWNSIISDLSVHGLGKDAL 390
Query: 192 KLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRA---VVFLGSVSREGMSPDVVTYNTVI 248
++ ++++ G PN T+ + G LD+A + SV R + P + Y ++
Sbjct: 391 EIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYR--VEPTIEHYGCMV 448
Query: 249 CGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK-GMVQDANRI 298
L R ++ E+EE ++++ D +++ G CK+ G ++ A RI
Sbjct: 449 DLLGRMGKIEEAEELVNEIPAD---EASILLESLL-GACKRFGQLEQAERI 495
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 118/284 (41%), Gaps = 39/284 (13%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + G+ ++A+ V++ M+ +P + +++ G N+ + Y +K+ G+
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
+ + F + G H A R+ N+ V++ T+++G+ G D++R+LFD
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLE----KRTIVSWTTMISGYARCGLLDVSRKLFD 347
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
+M E+ DV +N ++ G + ++ L ++ P+ T + + G
Sbjct: 348 DMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 221 ALDRAVVFLGSVSREGMSPDV-------------------------------VTYNTVIC 249
ALD + + + +S +V +TY +I
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 463
Query: 250 GLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQ 293
GL + ++M++ G+ PDE T+ ++ C GM+Q
Sbjct: 464 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQ 507
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 125/290 (43%), Gaps = 25/290 (8%)
Query: 11 FNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYN 70
F+ ME E L N ++ G+ V+A R Q+A+ +F+ M N +P +
Sbjct: 346 FDDME----EKDVVLWNAMIGGS-VQAKRG-------QDALALFQEMQTSNTKPDEITMI 393
Query: 71 AIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVF 130
++ + G + ++ ++ + +V T + + + G AL + +
Sbjct: 394 HCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ-- 451
Query: 131 GCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPES 190
+ N++ Y ++ G GD A F+EM++ + PD TF L+ C G +
Sbjct: 452 --TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTG 509
Query: 191 EKLLNKVLKR-GVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVIC 249
+++ R ++P L Y+I + L R G L+ A + S+ M D + ++
Sbjct: 510 RDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP---MEADAAVWGALLF 566
Query: 250 GLCRKSRVVE-SEECLHKMVNDGLQPDEFTYNTIIDG-YCKKGMVQDANR 297
G CR VE E+ K++ L P + ++DG Y + M +DA R
Sbjct: 567 G-CRMHGNVELGEKAAKKLLE--LDPSDSGIYVLLDGMYGEANMWEDAKR 613
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 13/247 (5%)
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAAL 121
C+ ++ + +++++ V+ G AHKV+ DK DV +YT IK + G A
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVF----DKSPHRDVVSYTALIKGYASRGYIENAQ 220
Query: 122 RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGL 181
+L + V + V++ +++G+ E G+ A ELF +M++ ++ PD +T +V
Sbjct: 221 KLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
+ G + ++ + G NL N I + G L+ A + + DV
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DV 332
Query: 242 VTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKD 301
+++NT+I G + E+ +M+ G P++ T +I+ G + D R +
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI-DIGRWIHV 391
Query: 302 AVFKGFK 308
+ K K
Sbjct: 392 YIDKRLK 398
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 106/270 (39%), Gaps = 10/270 (3%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
++ + Y G +EA+++F+ M N P + +++ + G +V++ +
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
D G GS++ I + + G A L + + +++ T++ G+
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY----KDVISWNTLIGGYTHMNLY 348
Query: 153 DLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKR--GVSPNLFTYN 210
A LF EML P+ T ++ G + + + KR GV+
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 211 IFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVND 270
I + G ++ A S+ + +S ++N +I G R S + +M
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLS----SWNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 271 GLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
G+QPD+ T+ ++ GM+ I +
Sbjct: 465 GIQPDDITFVGLLSACSHSGMLDLGRHIFR 494
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 109/243 (44%), Gaps = 12/243 (4%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + G+++ A VFE + S+ +N ++N + A ++ M ++ GS
Sbjct: 171 YAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGS- 229
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
++ IK + +G + A +L M N V++ T++ GF + GD + A +
Sbjct: 230 ---WSTLIKGYVDSGELNRAKQLFELMP----EKNVVSWTTLINGFSQTGDYETAISTYF 282
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREG 220
EMLE+ L P+ T ++ K G + ++ +L G+ + + + G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
Query: 221 ALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYN 280
LD A +++ + D++++ +I G R ++ +C +M+ G +PDE +
Sbjct: 343 ELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFL 398
Query: 281 TII 283
++
Sbjct: 399 AVL 401
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 20/235 (8%)
Query: 70 NAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKS-----FCRTGRP-HAALRL 123
NA++ L E F + + ++ M GV D T+ +KS F GR HAA
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAAT-- 152
Query: 124 LRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCK 183
L+N C ++ ++V + + G A ++F+E +R + +N L++G C+
Sbjct: 153 LKNF--VDC--DSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCR 208
Query: 184 KGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVT 243
+ + L + +R N +++ I+G G L+RA + + +VV+
Sbjct: 209 AKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMPEK----NVVS 260
Query: 244 YNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
+ T+I G + + +M+ GL+P+E+T ++ K G + RI
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI 315
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Query: 135 NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL 194
N V++ ++ GF + G+ A LF +ML +L PD TF ++ K + E +++
Sbjct: 306 NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQ 365
Query: 195 NKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRK 254
V K+G + L N I R G L A++ S+ RE PD+V++ +VI L
Sbjct: 366 AMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSI-RE---PDLVSWTSVIGALASH 421
Query: 255 SRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILK 300
ES + M+ LQPD+ T+ ++ G+VQ+ R K
Sbjct: 422 GFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFK 466
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 14/234 (5%)
Query: 63 EPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALR 122
EP V YNA++N V+ + A V ++K +G TY + ++ + +
Sbjct: 590 EPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHE 649
Query: 123 LLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLC 182
R M NA+AY +V ++ G D A ++M R + A + L LC
Sbjct: 650 FFRKMQKSSIP-NALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLC 708
Query: 183 KKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVV 242
G E +L K+ + P + TY IQ G + A + ++ SP++V
Sbjct: 709 SAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQM-KKVCSPNLV 767
Query: 243 TYNTVICGLCRKSRVVESEECLHKMVNDG------------LQPDEFTYNTIID 284
T N ++ + E+ E KM DG + PD +T+NT++D
Sbjct: 768 TCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLD 821
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 45/292 (15%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y G ++EA VF+ + + E ++ +N +MN L + G F+ + ++ +M GV D
Sbjct: 139 YTNCGDLKEASRVFDEVKI---EKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMD 194
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNM--SVFGCSFNAVAYCTVVAGFYEFGDR-DLARE 157
YT++ KSF H +L + S FG N+V V FY R D AR+
Sbjct: 195 SYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFG-ERNSVGNSLV--AFYLKNQRVDSARK 251
Query: 158 LFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLC 217
+FDEM ER DV ++N +++G G + + ++L G+ +L T G
Sbjct: 252 VFDEMTER----DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 218 --REGALDRAVVFLG-----------------------------SVSREGMSPDVVTYNT 246
R +L RAV +G +V RE VV+Y +
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 247 VICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRI 298
+I G R+ E+ + +M +G+ PD +T +++ + ++ + R+
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 419
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 47/258 (18%)
Query: 46 KVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYT 105
+V A VF+ M E V S+N+I+N V G + V+++M G+ D+ T
Sbjct: 245 RVDSARKVFDEM----TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLAT-I 299
Query: 106 IRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFY-EFGDRDLARELFDEMLE 164
+ + + C R + R + ++ V C +C + Y + GD D A+ +F EM +
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 165 RSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDR 224
RS+ +Y I G REG
Sbjct: 360 RSV---------------------------------------VSYTSMIAGYAREGLAGE 380
Query: 225 AVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG-LQPDEFTYNTII 283
AV + EG+SPDV T T + C + R+++ + +H+ + + L D F N ++
Sbjct: 381 AVKLFEEMEEEGISPDVYTV-TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 439
Query: 284 DGYCKKGMVQDANRILKD 301
D Y K G +Q+A + +
Sbjct: 440 DMYAKCGSMQEAELVFSE 457
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 115/266 (43%), Gaps = 9/266 (3%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRM 92
+Y + Y R G EAV +FE M+ P V++ A++N + ++ +V+ +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 93 KDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDR 152
K+ +G D++ + + + G A + M V + +++ T++ G+ +
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV----KDIISWNTIIGGYSKNCYA 479
Query: 153 DLARELFDEML-ERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNI 211
+ A LF+ +L E+ PD T ++ + ++ +++ G + N
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 212 FIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDG 271
+ + GAL A + ++ S D+V++ +I G E+ ++M G
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIA----SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595
Query: 272 LQPDEFTYNTIIDGYCKKGMVQDANR 297
++ DE ++ +++ G+V + R
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWR 621
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 105/256 (41%), Gaps = 13/256 (5%)
Query: 41 YGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSD 100
Y + G + A VF M + SV SY +++ G +A K++ M+++G+ D
Sbjct: 341 YSKCGDLDSAKAVFREMS----DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 101 VYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFD 160
VYT T + R R+ + F+ ++ + + G A +F
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 161 EMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVL-KRGVSPNLFTYNIFIQGLCRE 219
EM + D+ ++N ++ G K + E+ L N +L ++ SP+ T +
Sbjct: 457 EMRVK----DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 220 GALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTY 279
A D+ G + R G D N+++ + ++ + H + +D D ++
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA----HMLFDDIASKDLVSW 568
Query: 280 NTIIDGYCKKGMVQDA 295
+I GY G ++A
Sbjct: 569 TVMIAGYGMHGFGKEA 584
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 131/302 (43%), Gaps = 39/302 (12%)
Query: 25 LENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQ 84
L NNL G + +R Y G + A +VF+RM + P ++N++++ E G +
Sbjct: 123 LRNNL--GISSKLVRLYASCGYAEVAHEVFDRMSKRDSSP--FAWNSLISGYAELGQYED 178
Query: 85 AHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVA 144
A +Y +M + GV D +T+ +K+ G + R++ G ++ +V
Sbjct: 179 AMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVV 238
Query: 145 GFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSP 204
+ + GD AR +FD + + D ++N ++ G G + E+ + +++ G+ P
Sbjct: 239 MYAKCGDIVKARNVFDMIPHK----DYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEP 294
Query: 205 NLFTYN------------------IFIQGLCREGALDRAVVFLGS----------VSREG 236
+ + + +G+ E ++ A++ L S + +
Sbjct: 295 DKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM 354
Query: 237 MSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDAN 296
+ D V++N +I + S ++ E +H+ +PD T+ +++ GMV+D
Sbjct: 355 LERDTVSWNAIISAHSKNSNGLKYFEQMHRA---NAKPDGITFVSVLSLCANTGMVEDGE 411
Query: 297 RI 298
R+
Sbjct: 412 RL 413
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 146/314 (46%), Gaps = 31/314 (9%)
Query: 2 LQKLGHHREFNQMENLLSEM-RATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLY 60
LQ L NQ++ L +++ R L +L + + S R + AV VF ++
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCR--QTNLAVRVFNQVQ-- 78
Query: 61 NCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAA 120
EP+VH N+++ + QA V+ M+ G+ +D +TY +K+ C
Sbjct: 79 --EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKA-CSGQSWLPV 135
Query: 121 LRLLRN-MSVFGCSF-----NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATF 174
++++ N + G S NA+ C G G RD A +LF++M ER D ++
Sbjct: 136 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCG--GLGVRD-AMKLFEKMSER----DTVSW 188
Query: 175 NKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
N ++ GL K G + ++ +L +++ +R +L ++N + G R + +A +
Sbjct: 189 NSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPE 244
Query: 235 EGMSPDVVTYNTVICGLCRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQD 294
+ V+++T++ G + + + KM + T+ II GY +KG++++
Sbjct: 245 R----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKE 298
Query: 295 ANRILKDAVFKGFK 308
A+R++ V G K
Sbjct: 299 ADRLVDQMVASGLK 312
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 21/301 (6%)
Query: 2 LQKLGHHREFNQMENLLSEMRATLENNLLEGAYVEAMRSYGRFGKVQEAVDVFERMDLYN 61
L K G R+ ++ + + + N +L+G Y R ++ +A ++FE+M
Sbjct: 195 LVKAGELRDARRLFDEMPQRDLISWNTMLDG--------YARCREMSKAFELFEKMP--- 243
Query: 62 CEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAAL 121
E + S++ ++ + G A ++ +M +V T+TI I + G A
Sbjct: 244 -ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEAD 300
Query: 122 RLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGL 181
RL+ M G F+A A +++A E G L + + +L + N L+
Sbjct: 301 RLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 182 CKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDV 241
K G + ++ + N + K+ +L ++N + GL G A+ + REG+ PD
Sbjct: 361 AKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Query: 242 VTYNTVICGLCRKSRVVESEECLHKM--VNDGLQPDEFTYNTIIDGYCKKGMVQDANRIL 299
VT+ V+C + E + + M V D L P Y ++D + G +++A +++
Sbjct: 417 VTFIAVLCSCNHAGLIDEGIDYFYSMEKVYD-LVPQVEHYGCLVDLLGRVGRLKEAIKVV 475
Query: 300 K 300
+
Sbjct: 476 Q 476
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 119/261 (45%), Gaps = 23/261 (8%)
Query: 31 EGAYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKV-Y 89
E Y ++ + G + EA ++ M + + + IM L++ F++A KV Y
Sbjct: 215 EITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFY 274
Query: 90 MRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF 149
+ + +G D Y + I C+ GR A ++ M G + + + +++ G
Sbjct: 275 VMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLL-- 332
Query: 150 GDRDLARELFDE--MLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLF 207
+ R + + ++E PD++ ++ L+ GL K E+ ++ K+++RG P +
Sbjct: 333 ----VKRRVVEAYGLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMH 388
Query: 208 TYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTV-ICGLCRKSRVVESEECLHK 266
TY + +QG LG R+G P +V ++T+ + G+ + + +E+ + + +
Sbjct: 389 TYLMLLQG------------HLGRRGRKGPDP-LVNFDTIFVGGMIKAGKRLETTKYIER 435
Query: 267 MVNDGLQPDEFTYNTIIDGYC 287
+ GL+ F Y+ + Y
Sbjct: 436 TLKRGLEVPRFDYSKFLHYYS 456
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 5/173 (2%)
Query: 135 NAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLL 194
+ + Y T++ GF + GD A +L++ M++ D+ K++ L KK E+ K+
Sbjct: 214 DEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVF 273
Query: 195 N-KVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCR 253
V KRG + Y + I LC+ G +D A + G+ D +T+ ++I GL
Sbjct: 274 YVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLV 333
Query: 254 KSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDANRILKDAVFKG 306
K RVVE+ + +V PD Y+ +I G K +A + + + +G
Sbjct: 334 KRRVVEA----YGLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRG 382
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%)
Query: 116 RPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEMLERSLCPDVATFN 175
+P AAL L +M G + + Y T++ G+ G+ D A+E+F EM + P+V T+N
Sbjct: 704 KPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYN 763
Query: 176 KLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSRE 235
++ GLC G E+ LL ++ RG +PN Y+ + L + G L A + + ++
Sbjct: 764 SMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
Query: 236 G 236
G
Sbjct: 824 G 824
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 194 LNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCR 253
LN + + G+ P++ Y I G G LD+A ++ +G P+V TYN++I GLC
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 254 KSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKK-GMVQDANRILKDAVFKG 306
E+ L +M + G P+ Y+T++ GY +K G + +A +++K+ V KG
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLV-GYLRKAGKLSEARKVIKEMVKKG 824
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 150 GDRDLAR-ELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFT 208
G++ LA + M E + P V + L+ G G + +++++ ++ +G PN+FT
Sbjct: 702 GNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFT 761
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV 268
YN I+GLC G A L + G +P+ V Y+T++ L + ++ E+ + + +MV
Sbjct: 762 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMV 821
Query: 269 NDG 271
G
Sbjct: 822 KKG 824
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 42 GRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDV 101
G+ K A+ M +PSV Y +++ V G ++A +++ M KG +V
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 102 YTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDE 161
+TY I+ C G A LL+ M GC+ N V Y T+V + G AR++ E
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Query: 162 MLER 165
M+++
Sbjct: 820 MVKK 823
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 92 MKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGD 151
MK+ G+ V YT I + +G A + R M+V G N Y +++ G G+
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 774
Query: 152 RDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG 201
A L EM R P+ ++ LV L K G + E+ K++ +++K+G
Sbjct: 775 FREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 55/263 (20%)
Query: 43 RFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNILVEFGYFNQAHKVYMRMKDKGVGSDVY 102
R G + EA D+FE+++ N ++N +++ V+ NQA K++ M + DV
Sbjct: 52 RSGYIAEARDIFEKLEARNTV----TWNTMISGYVKRREMNQARKLFDVMPKR----DVV 103
Query: 103 TYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEFGDRDLARELFDEM 162
T+ I + G +R L AR+LFDEM
Sbjct: 104 TWNTMISGYVSCG----GIRFLEE----------------------------ARKLFDEM 131
Query: 163 LERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGAL 222
R D ++N ++ G K + E+ L K+ +R N +++ I G C+ G +
Sbjct: 132 PSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEV 183
Query: 223 DRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECL--HKMVNDGLQPDEFTYN 280
D AVV + + SP ++ GL + R+ E+ L + + G + + YN
Sbjct: 184 DSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYN 239
Query: 281 TIIDGYCKKGMVQDANRILKDAV 303
T+I GY ++G V+ A R L D +
Sbjct: 240 TLIVGYGQRGQVE-AARCLFDQI 261
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 120/275 (43%), Gaps = 29/275 (10%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERM-----DLYNCE------PSVHSYNAIMNILVEFGY 81
AY + YG+ G+V+ A +F+++ D + E +V S+N+++ ++ G
Sbjct: 237 AYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGD 296
Query: 82 FNQAHKVYMRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCT 141
A ++ +MKD+ D ++ I + R A L M + +A ++
Sbjct: 297 VVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMP----NRDAHSWNM 348
Query: 142 VVAGFYEFGDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESEKLLNKVLKRG 201
+V+G+ G+ +LAR F++ E+ ++N ++ K E+ L ++ G
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEK----HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG 404
Query: 202 VSPNLFTYNIFIQGLCREGALD-RAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVES 260
P+ T + G ++ R + + + + + PDV +N +I R ++ES
Sbjct: 405 EKPDPHTLTSLLSA--STGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMES 462
Query: 261 EECLHKMVNDGLQPDEFTYNTIIDGYCKKGMVQDA 295
+M L+ + T+N +I GY G +A
Sbjct: 463 RRIFDEM---KLKREVITWNAMIGGYAFHGNASEA 494
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 114/273 (41%), Gaps = 21/273 (7%)
Query: 33 AYVEAMRSYGRFGKVQEAVDVFERMDLYNCEPSVHSYNAIMNI---LVEFGYFNQAHKVY 89
++ + +Y + +EAVD+F RM++ +P H+ ++++ LV Q H++
Sbjct: 376 SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV 435
Query: 90 MRMKDKGVGSDVYTYTIRIKSFCRTGRPHAALRLLRNMSVFGCSFNAVAYCTVVAGFYEF 149
+ K V DV + I + R G + R+ M + + + ++ G+
Sbjct: 436 V----KTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKL---KREVITWNAMIGGYAFH 488
Query: 150 GDRDLARELFDEMLERSLCPDVATFNKLVHGLCKKGFVPESE-KLLNKVLKRGVSPNLFT 208
G+ A LF M + P TF +++ G V E++ + ++ + + P +
Sbjct: 489 GNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEH 548
Query: 209 YNIFIQGLCREGALDRAVVFLGSVSREGMSPDVVTYNTVICGLCRKSRVVESEECLHKMV 268
Y+ + +G + A+ + S+ E PD TV L R+ + H
Sbjct: 549 YSSLVNVTSGQGQFEEAMYIITSMPFE---PD----KTVWGALLDACRIYNNVGLAHVAA 601
Query: 269 N--DGLQPDEFT-YNTIIDGYCKKGMVQDANRI 298
L+P+ T Y + + Y G+ +A+++
Sbjct: 602 EAMSRLEPESSTPYVLLYNMYADMGLWDEASQV 634
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 175 NKLVHGLCKKGFVPESEKLLNKVLKRGVSPNLFTYNIFIQGLCREGALDRAVVFLGSVSR 234
NK ++ + + G++ E+ + K+ R N T+N I G + +++A + +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 235 EGMSPDVVTYNTVICGL--CRKSRVVESEECLHKMVNDGLQPDEFTYNTIIDGYCKKGMV 292
DVVT+NT+I G C R +E K+ ++ D F++NT+I GY K +
Sbjct: 100 R----DVVTWNTMISGYVSCGGIRFLEEA---RKLFDEMPSRDSFSWNTMISGYAKNRRI 152
Query: 293 QDA 295
+A
Sbjct: 153 GEA 155