Miyakogusa Predicted Gene

Lj0g3v0235949.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0235949.2 Non Chatacterized Hit- tr|I1MCF9|I1MCF9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.65,0,diphth2_R:
diphthamide biosynthesis enzyme Dph1/Dp,Diphthamide synthesis,
DPH1/DPH2; Diphthamide_syn,CUFF.15461.2
         (162 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59630.1 | Symbols:  | diphthamide synthesis DPH2 family prot...   237   3e-63
AT5G62030.1 | Symbols:  | diphthamide synthesis DPH2 family prot...    49   2e-06

>AT3G59630.1 | Symbols:  | diphthamide synthesis DPH2 family protein
           | chr3:22025355-22027776 REVERSE LENGTH=491
          Length = 491

 Score =  237 bits (604), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 110/159 (69%), Positives = 132/159 (83%), Gaps = 2/159 (1%)

Query: 1   MVTDLSPQRRILKRRYYLVERAKDANIVAILVGTLGVAGYLNIINQMTELIKGAGKKPYT 60
           +VT+   QRRILKRRYYLVE+AKDANI+ ILVGTLGVAGYL++I+ M  LI  AGKK Y 
Sbjct: 251 LVTEFYQQRRILKRRYYLVEKAKDANIIGILVGTLGVAGYLHMIHHMQALISAAGKKSYI 310

Query: 61  LVMGRPNPAKLANFPECDVFLYVSCAQTALLDSKEYLAPVITPFEASIAFNRGSQWTGAY 120
           L MGRPNPAKLANFPECDVF+Y+SCAQTALLDSKE+++PVITPFEA++AF+RGS+WTGAY
Sbjct: 311 LAMGRPNPAKLANFPECDVFIYISCAQTALLDSKEFMSPVITPFEANLAFSRGSEWTGAY 370

Query: 121 VMGFRDLINLPQLKVENQ--DEEARFSFLQGRYVEDFEN 157
           +M F+D+IN  + + E     EE RFSF QG YVED + 
Sbjct: 371 LMHFQDVINSVKSESEAHIGSEEPRFSFFQGGYVEDHKT 409


>AT5G62030.1 | Symbols:  | diphthamide synthesis DPH2 family protein
           | chr5:24919046-24920407 FORWARD LENGTH=453
          Length = 453

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 3/109 (2%)

Query: 8   QRRILKRRYYLVERAKDANIVAILVGTLGVAGYLNIINQMTELIKGAGKKPYTLVMGRPN 67
            + + + R   + RA++A    I++GTLG  G   I+ ++ + +   G     ++M   +
Sbjct: 264 HKGMRETRMRAIARAREAKTWGIVLGTLGRQGNPKILERLEKKMMEKGIDSTVVLMSELS 323

Query: 68  PAKLANFPEC-DVFLYVSCAQTALLDSKEYLAPVITPFEASIA--FNRG 113
           P ++A F +  D ++ ++C + ++   + +L P++T FEA IA  F RG
Sbjct: 324 PTRVALFEDSVDAWVQIACPRLSIDWGEAFLKPLLTTFEAEIALGFIRG 372