Miyakogusa Predicted Gene
- Lj0g3v0235899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0235899.1 Non Chatacterized Hit- tr|D7TEQ6|D7TEQ6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.61,1e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; seg,NULL; PPR,Pentatricopeptide repea,CUFF.15444.1
(319 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 163 1e-40
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 5e-37
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 151 6e-37
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 5e-36
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 142 4e-34
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 142 5e-34
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 2e-33
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 5e-33
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 137 1e-32
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 2e-31
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 2e-31
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 2e-31
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 131 7e-31
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 9e-31
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 129 2e-30
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 129 3e-30
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 126 2e-29
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 3e-29
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 8e-29
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 8e-29
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 123 1e-28
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 6e-28
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 7e-28
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 121 8e-28
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 9e-28
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 120 1e-27
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 119 3e-27
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 4e-27
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 5e-27
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 6e-27
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 118 6e-27
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 9e-27
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 117 1e-26
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 116 2e-26
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 6e-26
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 7e-26
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 7e-26
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 114 9e-26
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 1e-25
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 113 2e-25
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 2e-25
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 3e-25
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 3e-25
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 112 3e-25
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 5e-25
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 6e-25
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 6e-25
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 6e-25
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 7e-25
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 8e-25
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 2e-24
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 109 2e-24
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 6e-24
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 107 8e-24
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 107 9e-24
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 9e-24
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 107 1e-23
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 1e-23
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 8e-23
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 9e-23
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 102 3e-22
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 102 4e-22
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 101 7e-22
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 8e-22
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 9e-22
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 1e-21
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 3e-21
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 99 4e-21
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 98 6e-21
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 7e-21
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 7e-21
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 98 8e-21
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 8e-21
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 8e-21
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 9e-21
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 9e-21
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 9e-21
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 97 1e-20
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 3e-20
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 95 5e-20
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 5e-20
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 95 5e-20
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 95 5e-20
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 9e-20
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 8e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 9e-19
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 9e-19
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 89 3e-18
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 2e-17
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 86 3e-17
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 8e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 1e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 81 1e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 1e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 2e-15
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 80 2e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 4e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 7e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 7e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 7e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 8e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 77 1e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 1e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 1e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 77 1e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 1e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 7e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 9e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 74 1e-13
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 73 3e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 70 2e-12
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 70 3e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 3e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 4e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 69 5e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 7e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 8e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 67 2e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 66 4e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 65 4e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 9e-11
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 64 1e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 64 1e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 61 1e-09
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 5e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 5e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 53 3e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 53 3e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 8e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 50 3e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 4e-06
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 49 5e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 169/318 (53%), Gaps = 9/318 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL++C S S++ + LH L + F TKL+ +YA C + A +F + + N
Sbjct: 87 LLESCIDSGSIHLGRILHARFGLF-TEPDVFVETKLLSMYAKCGCIADARKVFDSMRERN 145
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+F +++++ +SR R+ + + M GV PD ++FPK+L+ CA + E
Sbjct: 146 LFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDV-EAGKVIH 204
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
LRV NS+L +Y+KCG+++ A + F MRERDV +WNS++ Y NG +
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHE 264
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLI 241
AVE+++ M +G P +VT N ++ Y ++G A + ++++ +V +WT +I
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
SG G +L +FR+M G+V P+A + + +C CL + G E+H +K+
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVV-PNAVTIMSAVSACSCLKVINQGSEVHSIAVKM-- 381
Query: 302 GEIFYRSAGAALLTLYAR 319
G I G +L+ +Y++
Sbjct: 382 GFIDDVLVGNSLVDMYSK 399
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 7/235 (2%)
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+VF +T++++ +G+ Q ++ + +M GV P+ + AC+ L ++
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK-VINQGSEV 374
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V NS++DMYSKCG +E A +VFD ++ +DV++WNSM++ Y G
Sbjct: 375 HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYC 434
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP-----NVISWTT 239
+A E+ M+ P+++T NT++ Y + G EA +F++++ N +W
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL 494
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
+I+GY G+ +L +FR+M P++ + +L +C L +EIHG
Sbjct: 495 IIAGYIQNGKKDEALELFRKM-QFSRFMPNSVTILSLLPACANLLGAKMVREIHG 548
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 130/328 (39%), Gaps = 77/328 (23%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S + ACS K +NQ ++H + G L+ +Y+ C L A +F +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V+ + S++ + + G + E + M+ D + P ++
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQ------DANLRPNII---------------- 454
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-----ERDVFSWNSMMSCYV 179
N+++ Y K GD A +F M +R+ +WN +++ Y+
Sbjct: 455 --------------TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYI 500
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVT---------------------------------- 205
NG A+E+ M+ P+ VT
Sbjct: 501 QNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHA 560
Query: 206 -RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
+N + D Y + G + + +F ++ ++I+W +LI GY G +G +L +F +M G
Sbjct: 561 VKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQG 620
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEI 292
+ P+ G LS ++++ +G + GK++
Sbjct: 621 IT-PNRGTLSSIILAHGLMGNVDEGKKV 647
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 19 AKQLHHYMLLHGSHRKPFFTT--KLIQIYADCDDLRSAHSLFRQLP-----QPNVFAFTS 71
K + + ++ +P T +I Y D A LF+++ Q N +
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL 494
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL--AALLEXXXXXXXXXX 129
I+A + ++G + +E + +M+F P+ +L ACA L A ++
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRN 554
Query: 130 XXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVE 189
V N++ D Y+K GD+E + +F M +D+ +WNS++ YV +G A+
Sbjct: 555 LDAIHA---VKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALA 611
Query: 190 VLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISGY 244
+ M+ G P+ T ++++ A+ MG V E KVF I + P + + ++ Y
Sbjct: 612 LFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLY 671
Query: 245 SSVGRHGVSLGIFREM 260
R +L +EM
Sbjct: 672 GRANRLEEALQFIQEM 687
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 153/329 (46%), Gaps = 39/329 (11%)
Query: 12 ASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTS 71
A + Q +Q+H ++++ G R TKLI + + H LF +P P+ F F S
Sbjct: 18 AGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNS 77
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXX 131
++ S+ L C+ Y M VSP Y F V+K+CA L+AL
Sbjct: 78 VIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSAL-RIGKGVHCHAVVS 136
Query: 132 XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVL 191
D V +++ YSKCGD+EGA +VFD M E+ + +WNS++S + NGL+ A++V
Sbjct: 137 GFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVF 196
Query: 192 ESMRVDGCEPDVVTRNTVMDA-----------------------------------YCRM 216
MR G EPD T +++ A Y R
Sbjct: 197 YQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRC 256
Query: 217 GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
G V +A +VF+++K+ NV +WT +IS Y + G ++ +F +M +D P+ V
Sbjct: 257 GDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAV 316
Query: 277 LVSCRCLGALASGKEIHGYGLK---IMPG 302
L +C G + G+ ++ K ++PG
Sbjct: 317 LSACAHAGLVEEGRSVYKRMTKSYRLIPG 345
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 123/228 (53%), Gaps = 2/228 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
S++++C+ +L K +H + ++ G + L+ Y+ C D+ A +F ++P
Sbjct: 110 FTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP 169
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ A+ S+++ ++GLA + I+ + +MR G PD F +L ACAQ A +
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGA-VSLGS 228
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++++ +++++YS+CGDV A VFD+M+E +V +W +M+S Y +G
Sbjct: 229 WVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHG 288
Query: 183 LSQRAVEVLESMRVD-GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
Q+AVE+ M D G P+ VT V+ A GLV E V++++
Sbjct: 289 YGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRM 336
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
V G D + ++ Y + G + A +VF+++ + ++++W +L+SG+ G ++
Sbjct: 135 VSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQ 194
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLT 315
+F +M G PD+ +L +C GA++ G +H Y I G G AL+
Sbjct: 195 VFYQMRESGFE-PDSATFVSLLSACAQTGAVSLGSWVHQY--IISEGLDLNVKLGTALIN 251
Query: 316 LYAR 319
LY+R
Sbjct: 252 LYSR 255
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 162/347 (46%), Gaps = 38/347 (10%)
Query: 8 QACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVF 67
++ S+ +S++ +QLH ++L G + L+ Y + SA +F ++ + +V
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 68 AFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
++ SI+ + +GLA + + + +M G+ D V CA + L+
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD-SRLISLGRAVHSI 321
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA 187
+ R CN++LDMYSKCGD++ A VF EM +R V S+ SM++ Y GL+ A
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 188 VEVLESMRVDGCEPDVVT-----------------------------------RNTVMDA 212
V++ E M +G PDV T N +MD
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
Y + G + EA VF +++ ++ISW T+I GYS +L +F ++ + PD
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 273 LSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
++ VL +C L A G+EIHGY ++ G R +L+ +YA+
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMR--NGYFSDRHVANSLVDMYAK 546
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 41/353 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+LQ C+ SKSL K++ +++ +G +KL +Y +C DL+ A +F ++
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK 156
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ ++ G I + +M GV D Y F V K+ + L ++
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V NS++ Y K V+ A +VFDEM ERDV SWNS+++ YV NG
Sbjct: 217 LHGFILKSGFGERN-SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 183 LSQRAVEVLESMRVDGCEPDVVTR-----------------------------------N 207
L+++ + V M V G E D+ T N
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
T++D Y + G + A VF ++ D +V+S+T++I+GY+ G G ++ +F EM +G +
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-IS 394
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPG-EIFYRSAGAALLTLYAR 319
PD ++ VL C L GK +H + + G +IF + AL+ +YA+
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN---ALMDMYAK 444
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 153/321 (47%), Gaps = 38/321 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+ C+ S+ ++ + +H + R+ F L+ +Y+ C DL SA ++FR++
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++TS++A ++R GLA + ++ + EM +G+SPD Y VL CA+ LL+
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY-RLLDEGKRV 419
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V N+++DMY+KCG ++ A VF EMR +D+ SWN+++ Y N +
Sbjct: 420 HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 479
Query: 185 QRAVE----VLESMRV--------------------------------DGCEPDVVTRNT 208
A+ +LE R +G D N+
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D Y + G + A +F+ I +++SWT +I+GY G ++ +F +M G +
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IEA 598
Query: 269 DAGALSGVLVSCRCLGALASG 289
D + +L +C G + G
Sbjct: 599 DEISFVSLLYACSHSGLVDEG 619
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L AC++ + ++ +++H Y++ +G L+ +YA C L AH LF + +
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++T ++A + HG ++ I + +MR G+ D F +L AC+ + E
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 624
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ ++DM ++ GD+ A R + M
Sbjct: 625 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 144/293 (49%), Gaps = 8/293 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRS---AHSLFRQLP 62
+L +KSL + +Q H +ML G F +KL+ A + ++ AHS+ ++
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
PN F S++ ++ + + EM V PD Y F VLKACA E
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGF-EEGR 160
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V N+++++Y + G E A +V D M RD SWNS++S Y+ G
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
L A + + M E +V + N ++ Y GLV EA +VF+ + +V+SW +++
Sbjct: 221 LVDEARALFDEME----ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVT 276
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
Y+ VG + L +F +M++D PD L VL +C LG+L+ G+ +H Y
Sbjct: 277 AYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVY 329
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 137/295 (46%), Gaps = 15/295 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NSLL A +++A+ L M F +I YA ++ A +F +P
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEERNVESWNF----MISGYAAAGLVKEAKEVFDSMPV 265
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLAALLEXXX 122
+V ++ +++ ++ G + +E + +M PDG+ VL ACA L +L +
Sbjct: 266 RDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEW 325
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ +++DMYSKCG ++ A VF +RDV +WNS++S +G
Sbjct: 326 VHVYIDKHGIEIEGF-LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHG 384
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISW 237
L + A+E+ M +G +P+ +T V+ A +G++ +A K+FE + +P + +
Sbjct: 385 LGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHY 444
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
++ +GR G + E+VN+ + L +L +C+ G L + I
Sbjct: 445 GCMV---DLLGRMG-KIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERI 495
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L AC++ SL+Q + +H Y+ HG + F T L+ +Y+ C + A +FR
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS 366
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V + SI++ S HGL + +E ++EM ++G P+G F VL AC + L +
Sbjct: 367 KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARK 426
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ ++D+ + G +E A + +E+
Sbjct: 427 LFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 165/319 (51%), Gaps = 10/319 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L++A + + + LH +++ G R KL+ Y +C + A +F ++P+ +
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRD 81
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ +R+G ++ ++ + EM G+ D ++ P +LKA L E
Sbjct: 82 ISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDR-EFGKMIH 140
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D + +S++DMYSK G+V A +VF ++ E+D+ +N+M+S Y N +
Sbjct: 141 CLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQAD 200
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI----KDPNVISWTTLI 241
A+ +++ M++ G +PDV+T N ++ + M + S++ E + P+V+SWT++I
Sbjct: 201 EALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSII 260
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-M 300
SG ++ + F++M+ G+ +P++ + +L +C L + GKEIHGY + +
Sbjct: 261 SGLVHNFQNEKAFDAFKQMLTHGL-YPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGL 319
Query: 301 PGEIFYRSAGAALLTLYAR 319
F RS ALL +Y +
Sbjct: 320 EDHGFVRS---ALLDMYGK 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 5/175 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+LL AC+ + K++H Y ++ G F + L+ +Y C + A LFR+ P+
Sbjct: 293 TLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK 352
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC--AQLAALLEXXX 122
F S++ ++ HGLA + +E + +M G D F +L AC A L L +
Sbjct: 353 TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLF 412
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMS 176
+ C ++D+ + G + A + MR E D+F W ++++
Sbjct: 413 LLMQNKYRIVPRLEHYAC--MVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLA 465
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 10/229 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+P+V ++TSI++ + + + + +M G+ P+ +L AC LA +
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKE 309
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
V +++LDMY KCG + A +F + ++ ++NSM+ CY +G
Sbjct: 310 IHGYSVVTGLEDHGF-VRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHG 368
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISW 237
L+ +AVE+ + M G + D +T ++ A GL +F +++ P + +
Sbjct: 369 LADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHY 428
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
++ +GR G + + EM+ + PD +L +CR G +
Sbjct: 429 ACMV---DLLGRAGKLVEAY-EMIKAMRMEPDLFVWGALLAACRNHGNM 473
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 172/348 (49%), Gaps = 41/348 (11%)
Query: 8 QACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL-PQPNV 66
+A S+S +LN+ +++H ++ G FF+ KLI Y+ + S+ S+FR++ P NV
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+ + SI+ S++GL + +E Y ++R VSPD Y FP V+KACA L E
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA-EMGDLVYE 130
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
DL V N+++DMYS+ G + A +VFDEM RD+ SWNS++S Y +G +
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV--------------------------- 219
A+E+ ++ PD T ++V+ A+ + +V
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 220 --------SEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
++A +VF+++ + +S+ T+I GY + S+ +F E N PD
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE--NLDQFKPDLL 308
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+S VL +C L L+ K I+ Y LK G + + L+ +YA+
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLK--AGFVLESTVRNILIDVYAK 354
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 10/274 (3%)
Query: 38 TTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGV 97
+ LI +YA C ++ + +F + + + ++++ R G ++ +MR V
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV 505
Query: 98 SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
PD F L CA LAA +L++ N++++MYSKCG +E ++
Sbjct: 506 VPDMATFLVTLPMCASLAAK-RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSS 564
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
RVF+ M RDV +W M+ Y G ++A+E M G PD V ++ A G
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624
Query: 218 LVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
LV E FE++K DP + + ++ S + + E + + PDA
Sbjct: 625 LVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQK----ISKAEEFIQAMPIKPDASI 680
Query: 273 LSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFY 306
+ VL +CR G + + + + +++ P + Y
Sbjct: 681 WASVLRACRTSGDMETAERVSRRIIELNPDDPGY 714
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 151/351 (43%), Gaps = 42/351 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+++AC+ ++ +L G F L+ +Y+ L A +F ++P
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR 170
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++ S+++ +S HG + +E Y E++ + PD + VL A L +++
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL-LVVKQGQGL 229
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V N ++ MY K A RVFDEM RD S+N+M+ Y+ +
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMV 289
Query: 185 QRAVEV-LESMRVDGCEPDVVT-----------------------------------RNT 208
+ +V + LE++ D +PD++T RN
Sbjct: 290 EESVRMFLENL--DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI 347
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D Y + G + A VF ++ + +SW ++ISGY G ++ +F+ M+
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L + VS R L L GK +H G+K G S AL+ +YA+
Sbjct: 408 HITYLMLISVSTR-LADLKFGKGLHSNGIK--SGICIDLSVSNALIDMYAK 455
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 139/352 (39%), Gaps = 40/352 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++S+L A + Q + LH + L G + L+ +Y A +F ++
Sbjct: 210 VSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD 269
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ +++ + + + + + + E PD VL+AC L L
Sbjct: 270 VRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDL-SLAK 327
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V N ++D+Y+KCGD+ A VF+ M +D SWNS++S Y+ +G
Sbjct: 328 YIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSG 387
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-----------------------------------RN 207
A+++ + M + + D +T N
Sbjct: 388 DLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN 447
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++D Y + G V ++ K+F + + ++W T+IS G L + +M V
Sbjct: 448 ALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM-RKSEVV 506
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PD L C L A GKEIH L+ G G AL+ +Y++
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLRF--GYESELQIGNALIEMYSK 556
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 162/340 (47%), Gaps = 43/340 (12%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
Q KQ+H +L+ G F TKLI + D+ A +F LP+P +F + +I+ +S
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
R+ + + Y+ M+ VSPD + FP +LKAC+ L+ L+ D+
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH-LQMGRFVHAQVFRLGFDADV 154
Query: 138 RVCNSVLDMYSKCGDVEGAARVFD--EMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
V N ++ +Y+KC + A VF+ + ER + SW +++S Y NG A+E+ MR
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 196 VDGCEPDVVTRNTVMDA-----------------------------------YCRMGLVS 220
+PD V +V++A Y + G V+
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
A +F+++K PN+I W +ISGY+ G ++ +F EM+N V PD +++ + +C
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTISITSAISAC 333
Query: 281 RCLGALASGKEIHGY-GLKIMPGEIFYRSAGAALLTLYAR 319
+G+L + ++ Y G ++F S AL+ ++A+
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISS---ALIDMFAK 370
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 120/232 (51%), Gaps = 1/232 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L A + + L Q + +H ++ G +P L +YA C + +A LF ++
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK 284
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
PN+ + ++++ ++++G AR+ I+ + EM K V PD + ACAQ+ + LE
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS-LEQAR 343
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ + ++++DM++KCG VEGA VFD +RDV W++M+ Y +G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
++ A+ + +M G P+ VT ++ A G+V E F ++ D +
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 455
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 143/322 (44%), Gaps = 41/322 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP- 64
LL+ACS L + +H + G F LI +YA C L SA ++F LP P
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 65 -NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE-XXX 122
+ ++T+I++ ++++G + +E +++MR V PD VL A L L +
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
DL + S+ MY+KCG V A +FD+M+ ++ WN+M+S Y NG
Sbjct: 245 HASVVKMGLEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-----------------------------------RN 207
++ A+++ M PD ++ +
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++D + + G V A VF++ D +V+ W+ +I GY GR ++ ++R M G V
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG-VH 421
Query: 268 PDAGALSGVLVSCRCLGALASG 289
P+ G+L++C G + G
Sbjct: 422 PNDVTFLGLLMACNHSGMVREG 443
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 133/281 (47%), Gaps = 40/281 (14%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSH--RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+LQ C + L+ KQ+H +L +G R + TKL+ YA CD L A LF +L
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRV 135
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
NVF++ +I+ R GL + + EM + PD +V P V KAC L
Sbjct: 136 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALK--WSRFGR 193
Query: 124 XXXXXXXXXXXXD-LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D + V +S+ DMY KCG ++ A++VFDE+ +R+ +WN++M YV NG
Sbjct: 194 GVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG 253
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDA------------------------------ 212
++ A+ + MR G EP VT +T + A
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 213 -----YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG 248
YC++GL+ A VF+++ + +V++W +ISGY G
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 160/321 (49%), Gaps = 7/321 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+++ L A + + + KQ H +++G T L+ Y + A +F ++
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 336
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V + I++ + + GL I MR + + D ++ A A+ L +
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENL-KLGK 395
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ + ++V+DMY+KCG + A +VFD E+D+ WN++++ Y +G
Sbjct: 396 EVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESG 455
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWT 238
LS A+ + M+++G P+V+T N ++ + R G V EA +F Q++ PN+ISWT
Sbjct: 456 LSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWT 515
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
T+++G G ++ R+M G+ P+A +++ L +C L +L G+ IHGY ++
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGL-RPNAFSITVALSACAHLASLHIGRTIHGYIIR 574
Query: 299 IMPGEIFYRSAGAALLTLYAR 319
+ S +L+ +YA+
Sbjct: 575 NLQHSSLV-SIETSLVDMYAK 594
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 37/320 (11%)
Query: 8 QACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVF 67
+AC A K + +H Y++ G F + L +Y C L A +F ++P N
Sbjct: 181 KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAV 240
Query: 68 AFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
A+ +++ + ++G + I +++MR +GV P L A A + +E
Sbjct: 241 AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG-VEEGKQSHAI 299
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA 187
D + S+L+ Y K G +E A VFD M E+DV +WN ++S YV GL + A
Sbjct: 300 AIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDA 359
Query: 188 VEVLESMRVDGC-----------------------------------EPDVVTRNTVMDA 212
+ + + MR++ E D+V +TVMD
Sbjct: 360 IYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDM 419
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
Y + G + +A KVF+ + ++I W TL++ Y+ G G +L +F M +G V P+
Sbjct: 420 YAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG-VPPNVIT 478
Query: 273 LSGVLVSCRCLGALASGKEI 292
+ +++S G + K++
Sbjct: 479 WNLIILSLLRNGQVDEAKDM 498
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 13/287 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+LL A + S +A +L + M L G +I + A +F Q+
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
PN+ ++T+++ ++G + + I +M+ G+ P+ + L ACA LA+L
Sbjct: 505 SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHI 564
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
+ + S++DMY+KCGD+ A +VF ++ N+M+S Y
Sbjct: 565 GRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYA 624
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-----KDPNV 234
G + A+ + S+ G +PD +T V+ A G +++A ++F I P +
Sbjct: 625 LYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCL 684
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ ++ +S G +L + EM PDA + ++ SC
Sbjct: 685 EHYGLMVDLLASAGETEKALRLIEEMP----FKPDARMIQSLVASCN 727
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 149/294 (50%), Gaps = 12/294 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
S+L AC ++N+ KQ+H ++ + + LI +Y C L A ++F ++
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
Q NV ++T+++ + + G A + ++ + +M+ G+ PD Y + + ACA +++L E
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V NS++ +Y KCGD++ + R+F+EM RD SW +M+S Y G
Sbjct: 393 FHGKAITSGLIHY-VTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISW 237
+ +++ + M G +PD VT V+ A R GLV + + F+ + P++ +
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVF-PDAGALSGVLVSCRCLGALASGK 290
+ +I +S GR ++ +GM F PDA + +L +CR G L GK
Sbjct: 512 SCMIDLFSRSGRLEEAMRFI-----NGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 139/291 (47%), Gaps = 42/291 (14%)
Query: 48 CDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKV 107
C + A LFR + + +V ++ +++ +++GLA++ IE + EM+ +G+ D Y F V
Sbjct: 218 CGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 108 LKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD 167
L AC L A+ E + V ++++DMY KC + A VFD M++++
Sbjct: 277 LPACGGLGAINE-GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 168 VFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD------------------------- 202
V SW +M+ Y G ++ AV++ M+ G +PD
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 203 ----------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
V N+++ Y + G + +++++F ++ + +SWT ++S Y+ GR
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 253 SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGE 303
++ +F +MV G+ PD L+GV+ +C G + G+ K+M E
Sbjct: 456 TIQLFDKMVQHGLK-PDGVTLTGVISACSRAGLVEKGQRY----FKLMTSE 501
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 39/214 (18%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
NS++ CG +E A ++F M E+D SW +M+ NGL++ A+E M+V G +
Sbjct: 209 NSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLK 267
Query: 201 PD-----------------------------------VVTRNTVMDAYCRMGLVSEASKV 225
D + + ++D YC+ + A V
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 226 FEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGA 285
F+++K NV+SWT ++ GY GR ++ IF +M G + PD L + +C + +
Sbjct: 328 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG-IDPDHYTLGQAISACANVSS 386
Query: 286 LASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L G + HG I G I Y + +L+TLY +
Sbjct: 387 LEEGSQFHGKA--ITSGLIHYVTVSNSLVTLYGK 418
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 167 DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
+ F +N+++ Y S A V + + +P++ + N ++ AY + GL+SE F
Sbjct: 40 ETFLYNNIVHAYALMKSSTYARRVFDRIP----QPNLFSWNNLLLAYSKAGLISEMESTF 95
Query: 227 EQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
E++ D + ++W LI GYS G G ++ + M+ D L +L G +
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHV 155
Query: 287 ASGKEIHGYGLKIMPGEIFYRSAGAALLTLYA 318
+ GK+IHG +K+ G Y G+ LL +YA
Sbjct: 156 SLGKQIHGQVIKL--GFESYLLVGSPLLYMYA 185
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 95/250 (38%), Gaps = 69/250 (27%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
+L N++L YSK G + F+++ +RD +WN ++ Y +GL AV+ +M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 196 VD------------------------------------GCEPDVVTRNTVMDAYCRMGLV 219
D G E ++ + ++ Y +G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 220 SEASKVFEQIKDPNV------------------------------ISWTTLISGYSSVGR 249
S+A KVF + D N +SW +I G + G
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 250 HGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSA 309
++ FREM G+ D VL +C LGA+ GK+IH ++ + Y
Sbjct: 251 AKEAIECFREMKVQGLKM-DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY--V 307
Query: 310 GAALLTLYAR 319
G+AL+ +Y +
Sbjct: 308 GSALIDMYCK 317
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 167/350 (47%), Gaps = 42/350 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+AC++ + L+ +H +L++G + ++ L+ +YA L A +F ++ +
Sbjct: 51 SLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRER 110
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V +T+++ +SR G+ + EMRF+G+ P ++L ++ L
Sbjct: 111 DVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL----QCL 166
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V NS+L++Y KC V A +FD+M +RD+ SWN+M+S Y G
Sbjct: 167 HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNM 226
Query: 185 QRAVEVLESMRVDGCEPD--------------------------VVTRNTVMDAYCRMGL 218
+++L MR DG PD +V +D + + L
Sbjct: 227 SEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTAL 286
Query: 219 VS--------EAS-KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
++ EAS +V E I + +V+ WT +ISG +GR +L +F EM+ G
Sbjct: 287 ITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLS- 345
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ A++ V+ SC LG+ G +HGY L+ G A +L+T+YA+
Sbjct: 346 SEAIASVVASCAQLGSFDLGASVHGYVLR--HGYTLDTPALNSLITMYAK 393
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 69 FTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXX 128
F S + S HG +Q + T++ M + PD + FP +LKACA L L
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQR-LSFGLSIHQQV 72
Query: 129 XXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAV 188
D + +S++++Y+K G + A +VF+EMRERDV W +M+ CY G+ A
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 189 EVLESMRVDGCEP--------------------------------DVVTRNTVMDAYCRM 216
++ MR G +P D+ N++++ YC+
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKC 192
Query: 217 GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
V +A +F+Q++ +++SW T+ISGY+SVG L + M DG+ PD
Sbjct: 193 DHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR-PDQQTFGAS 251
Query: 277 LVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L + L G+ +H +K G AL+T+Y +
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVK--TGFDVDMHLKTALITMYLK 292
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 131/313 (41%), Gaps = 38/313 (12%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L + LH ++ G T LI +Y C +++ + +P +V +T +++
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
R G A + + ++EM G V+ +CAQL + +
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGS-FDLGASVHGYVLRHGYTL 379
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D NS++ MY+KCG ++ + +F+ M ERD+ SWN+++S Y N +A+ + E M+
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK 439
Query: 196 VDGCE------------------------------------PDVVTRNTVMDAYCRMGLV 219
+ P + ++D Y + G +
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYL 499
Query: 220 SEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
A + F+ I +V+SW LI+GY G+ ++L I+ E ++ GM P+ VL S
Sbjct: 500 EAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGME-PNHVIFLAVLSS 558
Query: 280 CRCLGALASGKEI 292
C G + G +I
Sbjct: 559 CSHNGMVQQGLKI 571
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 2/226 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ +C+ S + +H Y+L HG LI +YA C L + +F ++ +
Sbjct: 351 SVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNER 410
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP-DGYVFPKVLKACAQLAALLEXXXX 123
++ ++ +I++ ++++ + + + EM+FK V D + +L+AC+ AL
Sbjct: 411 DLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLI 470
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
L V +++DMYSKCG +E A R FD + +DV SW +++ Y +G
Sbjct: 471 HCIVIRSFIRPCSL-VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGK 529
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
A+E+ G EP+ V V+ + G+V + K+F +
Sbjct: 530 GDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 160/350 (45%), Gaps = 47/350 (13%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL+ C S+NQ +Q+ MLLH + F K +++ D + LF +PN
Sbjct: 43 LLKKCI---SVNQLRQIQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLFSVTEEPN 95
Query: 66 VFAFTSIL-AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++F ++ + + Y M+F G+ PD + + V ACA+L +
Sbjct: 96 HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEI-GVGRSV 154
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ + +S++ MY+KCG V A ++FDE+ ERD SWNSM+S Y G +
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYA 214
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDA-------------------------------- 212
+ A+++ M +G EPD T +++ A
Sbjct: 215 KDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKL 274
Query: 213 ---YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
Y + G + A +VF Q+ + ++WT +I+ YS G+ + +F EM G V PD
Sbjct: 275 ISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG-VSPD 333
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
AG LS VL +C +GAL GK+I + ++ Y + G L+ +Y +
Sbjct: 334 AGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATG--LVDMYGK 381
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 27/290 (9%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L ACS L + L + F +KLI +Y C DL SA +F Q+
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMI 295
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + A+T+++ +S++G + + + + EM GVSPD VL AC + A LE
Sbjct: 296 KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGA-LELGK 354
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V ++DMY KCG VE A RVF+ M ++ +WN+M++ Y G
Sbjct: 355 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQG 414
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISW 237
++ A+ + + M V P +T V+ A GLV + + F ++ P + +
Sbjct: 415 HAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHY 471
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVF-------PDAGALSGVLVSC 280
T +I S G M+++ F PD L+ +L +C
Sbjct: 472 TNIIDLLSRAG-----------MLDEAWEFMERFPGKPDEIMLAAILGAC 510
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 40/321 (12%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N + AC+ + + + +H + G R LI +YA C + A LF ++ +
Sbjct: 136 NFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITE 195
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ S+++ +S G A+ ++ + +M +G PD +L AC+ L L
Sbjct: 196 RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 255
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ + ++ MY KCGD++ A RVF++M ++D +W +M++ Y NG
Sbjct: 256 EEMAITKKIGLSTF-LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGK 314
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVM--------------------------------- 210
S A ++ M G PD T +TV+
Sbjct: 315 SSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATG 374
Query: 211 --DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
D Y + G V EA +VFE + N +W +I+ Y+ G +L +F M V P
Sbjct: 375 LVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMS----VPP 430
Query: 269 DAGALSGVLVSCRCLGALASG 289
GVL +C G + G
Sbjct: 431 SDITFIGVLSACVHAGLVHQG 451
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 146/309 (47%), Gaps = 44/309 (14%)
Query: 14 KSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSIL 73
KS N+ K+++ +++HG + F TK++ +D+ A LF Q+ PNVF + SI+
Sbjct: 21 KSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSII 80
Query: 74 AFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
++ + L I Y ++ K PD + FP + K+CA L +
Sbjct: 81 RAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY-LGKQVHGHLCKFG 139
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
+ N+++DMY K D+ A +VFDEM ERDV SWNS++S
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS---------------- 183
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
Y R+G + +A +F + D ++SWT +ISGY+ +G +
Sbjct: 184 -------------------GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVE 224
Query: 253 SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGA- 311
++ FREM G + PD +L VL SC LG+L GK IH Y + F + G
Sbjct: 225 AMDFFREMQLAG-IEPDEISLISVLPSCAQLGSLELGKWIHLYAER----RGFLKQTGVC 279
Query: 312 -ALLTLYAR 319
AL+ +Y++
Sbjct: 280 NALIEMYSK 288
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 143/317 (45%), Gaps = 41/317 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+ ++C++ S KQ+H ++ G LI +Y DDL AH +F ++ + +
Sbjct: 115 MFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
Query: 66 VFAFTSILAFHSRHGLAR-------------------------------QCIETYAEMRF 94
V ++ S+L+ ++R G + + ++ + EM+
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
G+ PD VL +CAQL +L E VCN++++MYSKCG +
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSL-ELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVIS 293
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYC 214
A ++F +M +DV SW++M+S Y +G + A+E M+ +P+ +T ++ A
Sbjct: 294 QAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACS 353
Query: 215 RMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+G+ E + F+ ++ +P + + LI + G+ ++ I + M + PD
Sbjct: 354 HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP----MKPD 409
Query: 270 AGALSGVLVSCRCLGAL 286
+ +L SCR G L
Sbjct: 410 SKIWGSLLSSCRTPGNL 426
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 107/234 (45%), Gaps = 4/234 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L +C+ SL K +H Y G ++ LI++Y+ C + A LF Q+
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V +++++++ ++ HG A IET+ EM+ V P+G F +L AC+ + E
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCN 181
+ ++D+ ++ G +E A + M + D W S++S C
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS--CR 421
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNV 234
V ++ + EP+ + ++ + Y +G + S++ + I++ N+
Sbjct: 422 TPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENM 475
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 165/355 (46%), Gaps = 43/355 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHG-SHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
SLL+ C S++L + +H ++L + L ++YA C+++ A +F ++P
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 64 P--NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P N A+ ++ ++ + A + ++ Y +M GV P Y +P VLKACA L A+ +
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI-DDG 122
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D+ VC +++D Y+KCG++E A +VFDEM +RD+ +WN+M+S + +
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 182 GLSQRAVEVLESM-RVDGCEP-----------------------------------DVVT 205
+ + M R+DG P D+V
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM-VNDG 264
+ ++D Y + + A +VF+ N ++W+ +I GY + +F +M VND
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ A+ +L+ C G L+ G+ +H Y +K G I + +++ YA+
Sbjct: 303 VAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVK--AGFILDLTVQNTIISFYAK 355
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 127/289 (43%), Gaps = 3/289 (1%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L C+ L+ + +H Y + G +I YA L A F ++ +
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++ S++ + + + EMR G+ PD VL AC+ LAAL
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAAL-GHGSSCH 432
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ +CN+++DMY+KCG ++ A RVFD M +RD+ SWN+M+ + +GL +
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGK 492
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK--DPNVISWTTLISG 243
A+ + SM+ G PD VT ++ A GLV E ++F + D NVI +
Sbjct: 493 EALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC 552
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ + L + VN PD L +L +C G E+
Sbjct: 553 MTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEV 601
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 155/352 (44%), Gaps = 42/352 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC+ ++++ K +H ++ + T L+ YA C +L A +F ++P+ +
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRD 168
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ A+ ++++ S H I + +MR G+SP+ + A + AL E
Sbjct: 169 MVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVH 228
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL V +LD+Y+K + A RVFD +++ +W++M+ YV N +
Sbjct: 229 GYCTRMGFSN-DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMI 287
Query: 185 QRAVEVLESMRVD----------------GCEP---------------------DVVTRN 207
+ A EV M V+ GC D+ +N
Sbjct: 288 KEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQN 347
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
T++ Y + G + +A + F +I +VIS+ +LI+G R S +F EM G +
Sbjct: 348 TIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG-IR 406
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PD L GVL +C L AL G HGY ++ G S AL+ +Y +
Sbjct: 407 PDITTLLGVLTACSHLAALGHGSSCHGYC--VVHGYAVNTSICNALMDMYTK 456
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L ACS +L H Y ++HG L+ +Y C L A +F +
Sbjct: 412 LLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH 471
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+ ++ ++ ++L HGL ++ + + M+ GV+PD +L AC+
Sbjct: 472 KRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSH 522
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 150/335 (44%), Gaps = 41/335 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++LL+AC KSL KQ+H ++ ++G F TKL+ +Y C ++ A +F +
Sbjct: 114 FSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDEST 173
Query: 63 QPNVFAFTSILAFHSRHGLAR--QCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
NV+++ ++L G R + T+ EMR GV + Y V K+ A +AL +
Sbjct: 174 SSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ- 232
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ + S++DMY KCG V A RVFDE+ ERD+ W +M++
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 181 NGLSQRAVEVLESM-RVDGCEPDVVTRNTVM----------------------------- 210
N A+ + +M + P+ V T++
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 211 -------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
D YC+ G ++ +VF K N ISWT L+SGY++ GR +L M +
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE 412
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
G PD ++ VL C L A+ GKEIH Y LK
Sbjct: 413 GFR-PDVVTIATVLPVCAELRAIKQGKEIHCYALK 446
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 38/318 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSH-RKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L ++L K+L K++H ++L ++ +PF + LI +Y C D+ S +F
Sbjct: 319 LTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGS 378
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
Q N ++T++++ ++ +G Q + + M+ +G PD VL CA+L A+ +
Sbjct: 379 KQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAI-KQG 437
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
++ + S++ MYSKCG E R+FD + +R+V +W +M+ CYV N
Sbjct: 438 KEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVEN 497
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDA----------------------------- 212
+ +EV M + PD VT V+
Sbjct: 498 CDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS 557
Query: 213 ------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
Y + G + A+ F+ + ++WT +I Y ++ F +MV+ G
Sbjct: 558 ARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFT 617
Query: 267 FPDAGALSGVLVSCRCLG 284
P+ + VL C G
Sbjct: 618 -PNTFTFTAVLSICSQAG 634
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 141/332 (42%), Gaps = 37/332 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+++ ++ + + +L Q + H + +G F T L+ +Y C + A +F ++
Sbjct: 217 LSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIV 276
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ ++ + +++A + + + + + M + + P+ + +L + AL
Sbjct: 277 ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGK 336
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
V + ++D+Y KCGD+ RVF ++R+ SW ++MS Y N
Sbjct: 337 EVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAAN 396
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTV-------------------------------- 209
G +A+ + M+ +G PDVVT TV
Sbjct: 397 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 456
Query: 210 ---MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
M Y + G+ ++F++++ NV +WT +I Y + +FR M+
Sbjct: 457 TSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHR 516
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
PD+ + VL C L AL GKE+HG+ LK
Sbjct: 517 -PDSVTMGRVLTVCSDLKALKLGKELHGHILK 547
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 123/284 (43%), Gaps = 56/284 (19%)
Query: 68 AFTSILAFHSRHG---------LARQ-------CIETYAEMRFKGVSPDGYVFPKVLKAC 111
AF S L HS++ ARQ I Y E R G+ + F +L+AC
Sbjct: 64 AFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQR--GIPVNATTFSALLEAC 121
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSW 171
+ +LL + + ++ MY+ CG V+ A +VFDE +V+SW
Sbjct: 122 VRRKSLLHGKQVHVHIRINGLESNEF-LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSW 180
Query: 172 NSMMSCYVCNGLS--QRAVEVLESMRVDGCEPDVVT------------------------ 205
N+++ V +G Q + MR G + +V +
Sbjct: 181 NALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALA 240
Query: 206 -----------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSL 254
+ +++D Y + G V A +VF++I + +++ W +I+G + R +L
Sbjct: 241 IKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEAL 300
Query: 255 GIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
G+FR M+++ ++P++ L+ +L + AL GKE+H + LK
Sbjct: 301 GLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK 344
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 1/222 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L C+ +++ Q K++H Y L + T L+ +Y+ C LF +L Q
Sbjct: 423 TVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR 482
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV A+T+++ + + R IE + M PD +VL C+ L AL
Sbjct: 483 NVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELH 542
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
V ++ MY KCGD+ A FD + + +W +++ Y CN L
Sbjct: 543 GHILKKEFESIPF-VSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELF 601
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
+ A+ E M G P+ T V+ + G V EA + F
Sbjct: 602 RDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFF 643
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ +L CS K+L K+LH ++L PF + ++I++Y C DLRSA+ F +
Sbjct: 522 MGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVA 581
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+T+I+ + + L R I + +M +G +P+ + F VL C+Q + E
Sbjct: 582 VKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYR 641
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
+ V+++ ++CG VE A R+
Sbjct: 642 FFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 157/341 (46%), Gaps = 41/341 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S ++ACS + + H ++ HG F ++ L +Y + A +F ++P
Sbjct: 166 LSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMP 225
Query: 63 QPNVFAFTSILAFHSRHGLARQCIET-YAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+P+V +T++L+ S++ L + + YA R KG+ PDG F VL AC L L +
Sbjct: 226 EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRL-KQG 284
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
++ V +S+LDMY KCG V A +VF+ M +++ SW++++ Y N
Sbjct: 285 KEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQN 344
Query: 182 GLSQRAVEVLESMRVD-------------------------------GCEPDVVTRNTVM 210
G ++A+E+ M GC +V+ + ++
Sbjct: 345 GEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALI 404
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G + AS+V+ ++ N+I+W ++S + GR ++ F +MV G + PD
Sbjct: 405 DLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG-IKPDY 463
Query: 271 GALSGVLVSCRCLGALASGKEI-----HGYGLKIMPGEIFY 306
+ +L +C G + G+ YG+K PG Y
Sbjct: 464 ISFIAILTACGHTGMVDEGRNYFVLMAKSYGIK--PGTEHY 502
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 144/353 (40%), Gaps = 47/353 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD-DLRSAHSLFRQLPQ 63
SLLQ C+ S Q H +++ G L+ +Y +R +F
Sbjct: 66 SLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFV 125
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++TS+++ + + +E + EM G+ + + +KAC++L +
Sbjct: 126 KDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEV-RLGRC 184
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ + +++ +Y + A RVFDEM E DV W +++S + N L
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 184 SQRAVEVLESM-RVDGCEPD-----------------------------------VVTRN 207
+ A+ + +M R G PD VV +
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+++D Y + G V EA +VF + N +SW+ L+ GY G H ++ IFREM
Sbjct: 305 SLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----- 359
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHG-YGLKIMPGEIFYRSAGAALLTLYAR 319
D VL +C L A+ GKEIHG Y + G + S AL+ LY +
Sbjct: 360 KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVES---ALIDLYGK 409
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 127/228 (55%), Gaps = 4/228 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHG-SHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
++++AC +SL Q H + G S + L+ +Y + + A +LF +L
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS 693
Query: 64 P-NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
P ++ +T +++ HS++G + ++ Y EMR GV PD F VL+ C+ L++L E
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCN 181
+L N+++DMY+KCGD++G+++VFDEMR R +V SWNS+++ Y N
Sbjct: 754 IHSLIFHLAHDLDEL-TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
G ++ A+++ +SMR PD +T V+ A G VS+ K+FE +
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 40/328 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
SLL C+AS L Q H ++ + F L+ +YA C L A +F ++
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + +I+ + + + + + M G+ DG LKAC + L +
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
DL +S++DMYSKCG ++ A +VF + E V S N++++ Y N
Sbjct: 551 VHCLSVKCGLDR-DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDA---------------------------YCR 215
L + AV + + M G P +T T+++A Y
Sbjct: 610 L-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 216 MGLV---------SEASKVFEQIKDP-NVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+ L+ +EA +F ++ P +++ WT ++SG+S G + +L ++EM +DG
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG- 727
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIH 293
V PD VL C L +L G+ IH
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIH 755
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 147/327 (44%), Gaps = 39/327 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S L+AC+ L Q KQ+H + G R + LI +Y+ C ++ A +F LP
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V + +++A +S++ L + + + EM +GV+P F +++AC + +L
Sbjct: 592 EWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSMMSCYVCN 181
+ S+L MY + A +F E+ + + W MMS + N
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Query: 182 GLSQRAVEVLESMRVDGCEPDV-----------------------------------VTR 206
G + A++ + MR DG PD +T
Sbjct: 711 GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS 770
Query: 207 NTVMDAYCRMGLVSEASKVFEQI-KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
NT++D Y + G + +S+VF+++ + NV+SW +LI+GY+ G +L IF M
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM-RQSH 829
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEI 292
+ PD GVL +C G ++ G++I
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKI 856
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 142/305 (46%), Gaps = 5/305 (1%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILA 74
+L K +H L+ G + ++ +YA C + A F L + +V A+ S+L+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 75 FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXX 134
+S G + + ++ + + P+ + F VL CA+ +E
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCAR-ETNVEFGRQIHCSMIKMGLE 192
Query: 135 XDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM 194
+ +++DMY+KC + A RVF+ + + + W + S YV GL + AV V E M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 195 RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSL 254
R +G PD + TV++ Y R+G + +A +F ++ P+V++W +ISG+ G V++
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 255 GIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALL 314
F M V L VL + + L G +H +K+ Y G++L+
Sbjct: 313 EYFFNM-RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY--VGSSLV 369
Query: 315 TLYAR 319
++Y++
Sbjct: 370 SMYSK 374
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 151/327 (46%), Gaps = 38/327 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L A +L+ +H + G + + L+ +Y+ C+ + +A +F L
Sbjct: 330 LGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ N + +++ ++ +G + + +E + +M+ G + D + F +L CA + LE
Sbjct: 390 EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA-SHDLEMGS 448
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+L V N+++DMY+KCG +E A ++F+ M +RD +WN+++ YV +
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE 508
Query: 183 LSQRAVEVLESMRV-----DGC------------------------------EPDVVTRN 207
A ++ + M + DG + D+ T +
Sbjct: 509 NESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGS 568
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+++D Y + G++ +A KVF + + +V+S LI+GYS + +F+EM+ G V
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTRG-VN 626
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHG 294
P + ++ +C +L G + HG
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHG 653
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 134/314 (42%), Gaps = 39/314 (12%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I Y L+ A LF ++ P+V A+ +++ H + G IE + MR V
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
VL A + A L+ ++ V +S++ MYSKC +E AA+VF
Sbjct: 327 RSTLGSVLSAIG-IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT--------------- 205
+ + E++ WN+M+ Y NG S + +E+ M+ G D T
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 206 --------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYS 245
N ++D Y + G + +A ++FE++ D + ++W T+I Y
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 246 SVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIF 305
+ +F+ M G+V D L+ L +C + L GK++H +K
Sbjct: 506 QDENESEAFDLFKRMNLCGIV-SDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDL 564
Query: 306 YRSAGAALLTLYAR 319
+ G++L+ +Y++
Sbjct: 565 H--TGSSLIDMYSK 576
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 135/349 (38%), Gaps = 74/349 (21%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L C+ ++ +Q+H M+ G R + L+ +YA CD + A +F + PN
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+T + + + + GL + + + MR +G PD F
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV-------------------- 265
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+V++ Y + G ++ A +F EM DV +WN M+S + G
Sbjct: 266 ----------------TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCET 309
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAY----------------CRMGLVSE-------- 221
A+E +MR + T +V+ A ++GL S
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 222 -----------ASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
A+KVFE +++ N + W +I GY+ G + +F +M + G D
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ +L +C L G + H +K + + G AL+ +YA+
Sbjct: 430 -TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF--VGNALVDMYAK 475
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 43/348 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
LQ +LNQ KQLH ++ H KLI + C A +F Q+ +PNV
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
S++ H+++ Q ++EM+ G+ D + +P +LKAC+ + L
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG-QSWLPVVKMMHN 141
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCG--DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V N+++D YS+CG V A ++F++M ERD SWNSM+ V G
Sbjct: 142 HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGEL 201
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY 244
+ A + + M + D+++ NT++D Y R +S+A ++FE++ + N +SW+T++ GY
Sbjct: 202 RDARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGY 257
Query: 245 SSVGRHGVSL--------------------------GIFRE-------MVNDGMVFPDAG 271
S G ++ G+ +E MV G+ F DA
Sbjct: 258 SKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF-DAA 316
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
A+ +L +C G L+ G IH + G Y ALL +YA+
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAY--VLNALLDMYAK 362
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 142/305 (46%), Gaps = 16/305 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N++L + + +++A +L M R + ++ Y+ D+ A +F ++P
Sbjct: 220 NTMLDGYARCREMSKAFELFEKM----PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPL 275
Query: 64 P--NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P NV +T I+A ++ GL ++ +M G+ D +L AC + + LL
Sbjct: 276 PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTE-SGLLSLG 334
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
+ V N++LDMY+KCG+++ A VF+++ ++D+ SWN+M+ +
Sbjct: 335 MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVH 394
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF---EQIKD--PNVIS 236
G + A+E+ MR +G PD VT V+ + GL+ E F E++ D P V
Sbjct: 395 GHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEH 454
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYG 296
+ L+ VGR ++ + + M + P+ +L +CR + KE+
Sbjct: 455 YGCLVDLLGRVGRLKEAIKVVQTMPME----PNVVIWGALLGACRMHNEVDIAKEVLDNL 510
Query: 297 LKIMP 301
+K+ P
Sbjct: 511 VKLDP 515
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 147/330 (44%), Gaps = 37/330 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+LL+AC+ + + +LH ++ G H F L+ +YA DDL +A LF +
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 65 -NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ + SIL+ +S G + + +E + EM G +P+ Y L AC +
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 306
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+L VCN+++ MY++CG + A R+ +M DV +WNS++ YV N +
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 366
Query: 184 SQRAVEVLESMRVDGCEPDVVTR-----------------------------------NT 208
+ A+E M G + D V+ NT
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNT 426
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D Y + L + F ++ D ++ISWTT+I+GY+ H +L +FR++ M
Sbjct: 427 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI- 485
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLK 298
D L +L + L ++ KEIH + L+
Sbjct: 486 DEMILGSILRASSVLKSMLIVKEIHCHILR 515
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 152/352 (43%), Gaps = 42/352 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYML-LHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+L+ C ++++Q +QLH + S F KL+ +Y C L A +F ++P
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
FA+ +++ + +G + Y MR +GV FP +LKACA+L +
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNGL 183
+ N+++ MY+K D+ A R+FD +E+ D WNS++S Y +G
Sbjct: 206 SLLVKLGYHSTGF-IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 184 SQRAVEVLESMRVDGCEPDVVTR------------------------------------N 207
S +E+ M + G P+ T N
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++ Y R G + +A ++ Q+ + +V++W +LI GY + +L F +M+ G
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK- 383
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D +++ ++ + L L +G E+H Y +K G G L+ +Y++
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIK--HGWDSNLQVGNTLIDMYSK 433
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 156/349 (44%), Gaps = 39/349 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFT-TKLIQIYADCDDLRSAHSLFRQLPQ 63
S L AC K++H +L +H + LI +Y C + A + RQ+
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 348
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+V + S++ + ++ + ++ +E +++M G D ++ A +L+ LL
Sbjct: 349 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL-AGME 407
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN-- 181
+L+V N+++DMYSKC R F M ++D+ SW ++++ Y N
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 182 -----------------------GLSQRAVEVLESMRVDG---CEP------DVVTRNTV 209
G RA VL+SM + C D V +N +
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNEL 527
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + + A++VFE IK +V+SWT++IS + G ++ +FR MV G+ D
Sbjct: 528 VDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS-AD 586
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYA 318
+ AL +L + L AL G+EIH Y L+ G S A++ +YA
Sbjct: 587 SVALLCILSAAASLSALNKGREIHCYLLR--KGFCLEGSIAVAVVDMYA 633
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 145/336 (43%), Gaps = 42/336 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ S++ A +L +LH Y++ HG LI +Y+ C+ F ++
Sbjct: 389 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH 448
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ ++T+++A ++++ + +E + ++ K + D + +L+A + L ++L
Sbjct: 449 DKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML--IV 506
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D + N ++D+Y KC ++ A RVF+ ++ +DV SW SM+S NG
Sbjct: 507 KEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG 566
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-----------------------------------RN 207
AVE+ M G D V
Sbjct: 567 NESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV 626
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
V+D Y G + A VF++I+ ++ +T++I+ Y G ++ +F +M ++ V
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN-VS 685
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGE 303
PD + +L +C G L G+ G+ LKIM E
Sbjct: 686 PDHISFLALLYACSHAGLLDEGR---GF-LKIMEHE 717
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 106/221 (47%), Gaps = 2/221 (0%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M L S+L+A S KS+ K++H ++L G +L+ +Y C ++ A +F
Sbjct: 488 MILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFES 546
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ +V ++TS+++ + +G + +E + M G+S D + + A + L
Sbjct: 547 IKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL-CILSAAASLSALNK 605
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ + +V+DMY+ CGD++ A VFD + + + + SM++ Y
Sbjct: 606 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 665
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSE 221
+G + AVE+ + MR + PD ++ ++ A GL+ E
Sbjct: 666 HGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDE 706
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 159/351 (45%), Gaps = 45/351 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFT----TKLIQIYADCDDLRSAHSLFRQLP 62
L+AC+ + L+ K++H ++ + P F T L+ +YA C +++SAH +F +
Sbjct: 149 LKACTELQDLDNGKKIHCQLV-----KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDIT 203
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV +TS++A + ++ L + + + MR V + Y + ++ AC +L+AL +
Sbjct: 204 LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKW 263
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
V S+LDMY KCGD+ A RVF+E D+ W +M+ Y NG
Sbjct: 264 FHGCLVKSGIELSSCLV-TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNG 322
Query: 183 LSQRAVEVLESMRVDGCEPDVVT----------------------------------RNT 208
A+ + + M+ +P+ VT N
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANA 382
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++ Y + +A VFE + ++++W ++ISG+S G +L +F M N V P
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTP 441
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ ++ + +C LG+LA G +H Y +K+ G ALL YA+
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAK 492
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 153/349 (43%), Gaps = 44/349 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL C+ SL Q+ H + +G TKL+ +Y + A +F Q+P+P+
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ + +L + + + + ++ Y + G D VF K LKAC +L L
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDL--DNGKKI 164
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D V +LDMY+KCG+++ A +VF+++ R+V W SM++ YV N L +
Sbjct: 165 HCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 186 RAVEVLESMRVD-----------------------------------GCEPDVVTRNTVM 210
+ + MR + G E +++
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G +S A +VF + +++ WT +I GY+ G +L +F++M + P+
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM-KGVEIKPNC 343
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
++ VL C + L G+ +HG +K+ I+ + AL+ +YA+
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKV---GIWDTNVANALVHMYAK 389
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 130/295 (44%), Gaps = 21/295 (7%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L C ++L + +H + G L+ +YA C R A +F +
Sbjct: 348 SVLSGCGLIENLELGRSVHGLSIKVGIWDTNV-ANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEXXXX 123
++ A+ SI++ S++G + + + M + V+P+G + ACA L +L +
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ V ++LD Y+KCGD + A +FD + E++ +W++M+ Y G
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGD 526
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-KD----PNVISWT 238
+ ++E+ E M +P+ T +++ A G+V+E K F + KD P+ +T
Sbjct: 527 TIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYT 586
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
++ + G +L I +M + PD RC GA G +H
Sbjct: 587 CMVDMLARAGELEQALDIIEKMP----IQPDV----------RCFGAFLHGCGMH 627
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 165/352 (46%), Gaps = 42/352 (11%)
Query: 5 SLLQACSASKS-LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
S+L+AC+ S+ L+ ++H ++ G T L+ +Y +L A +F +P
Sbjct: 105 SVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV 164
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
++ A++++++ +G + + + M GV PD V++ CA+L L
Sbjct: 165 RDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCL-RIARS 223
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D +CNS+L MYSKCGD+ + R+F+++ +++ SW +M+S Y
Sbjct: 224 VHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEF 283
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDA------------------------------- 212
S++A+ M G EP++VT +V+ +
Sbjct: 284 SEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL 343
Query: 213 -----YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
Y G +S+ V + D N+++W +LIS Y+ G +LG+FR+MV +
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQ-RIK 402
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PDA L+ + +C G + GK+IHG+ ++ + F ++ +L+ +Y++
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN---SLIDMYSK 451
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 158/352 (44%), Gaps = 45/352 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRK-PFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
L ++CS SL QLH ++L+ G R+ P TKLI+ YA S+ +F P P
Sbjct: 7 LFRSCS---SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ F + ++ + L I+ Y + + +VFP VL+ACA L
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D + S+L MY + G++ A +VFD M RD+ +W++++S + NG
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 185 QRAVEVLESMRVDGCEPDVVTR-----------------------------------NTV 209
+A+ + + M DG EPD VT N++
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+ Y + G + + ++FE+I N +SWT +IS Y+ +L F EM+ G + P+
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG-IEPN 302
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLK--IMPGEIFYRSAGAALLTLYAR 319
L VL SC +G + GK +HG+ ++ + P Y S AL+ LYA
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPN---YESLSLALVELYAE 351
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 156/349 (44%), Gaps = 38/349 (10%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+++ C+ L A+ +H + L+ +Y+ C DL S+ +F ++ +
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK 266
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N ++T++++ ++R + + + +++EM G+ P+ VL +C + + E
Sbjct: 267 NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ +++++Y++CG + V + +R++ +WNS++S Y G+
Sbjct: 327 GFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMV 386
Query: 185 QRAVEVLESMRVDGCEPDVVT----------------------------------RNTVM 210
+A+ + M +PD T +N+++
Sbjct: 387 IQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLI 446
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G V AS VF QIK +V++W +++ G+S G ++ +F M + + +
Sbjct: 447 DMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEV 506
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L+ V+ +C +G+L GK +H + ++F AL+ +YA+
Sbjct: 507 TFLA-VIQACSSIGSLEKGKWVHHKLIISGLKDLF---TDTALIDMYAK 551
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 144/325 (44%), Gaps = 42/325 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTT---KLIQIYADCDDLRSAHSLFR 59
L S+L +C + + K +H + + P + + L+++YA+C L ++ R
Sbjct: 306 LYSVLSSCGLIGLIREGKSVHGFAVRR--ELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ N+ A+ S+++ ++ G+ Q + + +M + + PD + + AC A L
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACEN--AGLV 421
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D V NS++DMYSK G V+ A+ VF++++ R V +WNSM+ +
Sbjct: 422 PLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 180 CNGLSQRAVEVLESMR--------------VDGCE--------------------PDVVT 205
NG S A+ + + M + C D+ T
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFT 541
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
++D Y + G ++ A VF + +++SW+++I+ Y GR G ++ F +MV G
Sbjct: 542 DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESG- 600
Query: 266 VFPDAGALSGVLVSCRCLGALASGK 290
P+ VL +C G++ GK
Sbjct: 601 TKPNEVVFMNVLSACGHSGSVEEGK 625
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 11/283 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S + AC + + KQ+H + ++ F LI +Y+ + SA ++F Q+
Sbjct: 408 LASSISACENAGLVPLGKQIHGH-VIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V + S+L S++G + + I + M + + F V++AC+ + +L
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL--EKG 524
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
DL +++DMY+KCGD+ A VF M R + SW+SM++ Y +G
Sbjct: 525 KWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHG 584
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWT 238
A+ M G +P+ V V+ A G V E F +K PN +
Sbjct: 585 RIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFA 644
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
I S G + +EM DA ++ CR
Sbjct: 645 CFIDLLSRSGDLKEAYRTIKEMP----FLADASVWGSLVNGCR 683
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 160/342 (46%), Gaps = 45/342 (13%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
+L S+L+ C+ +Q Q+H Y+L GS + LI +Y C + A+ +F +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P+ NV +++++++ H +G + + ++EM +G+ P+ + F LKAC L A LE
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA-LEKG 126
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
+ V NS++DMYSKCG + A +VF + +R + SWN+M++ +V
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 182 GLSQRAVEVLESM-------------------------------RVDG--------CEPD 202
G +A++ M ++ G C
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 203 VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM-- 260
+++D Y + G + A K F+QIK+ +ISW++LI GY+ G ++G+F+ +
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPG 302
+N + D+ ALS ++ L GK++ +K+ G
Sbjct: 307 LNSQI---DSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 345
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 12/304 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSH--RKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
L SLL+ACS++ + KQ+H +++ G H T L+ +Y C L SA F Q
Sbjct: 213 LTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ 272
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ + + +++S++ +++ G + + + ++ D + ++ A A LL
Sbjct: 273 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFA-LLRQ 331
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ V NSV+DMY KCG V+ A + F EM+ +DV SW +++ Y
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVI 235
+GL +++V + M EPD V V+ A G++ E ++F ++ + P V
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+ ++ GR L + +++ + P+ G +L CR G + GKE+
Sbjct: 452 HYACVVDLLGRAGR----LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKI 507
Query: 296 GLKI 299
L+I
Sbjct: 508 LLRI 511
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
GLS + +V + G +++T N ++D YC+ A KVF+ + + NV+SW+ L
Sbjct: 19 KGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSAL 78
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIM 300
+SG+ G SL +F EM G ++P+ S L +C L AL G +IHG+ LKI
Sbjct: 79 MSGHVLNGDLKGSLSLFSEMGRQG-IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKI- 136
Query: 301 PGEIFYRSAGAALLTLYAR 319
G G +L+ +Y++
Sbjct: 137 -GFEMMVEVGNSLVDMYSK 154
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 155/319 (48%), Gaps = 38/319 (11%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+ L++ C +++++++ + ++ +G F LI +Y + L AH LF Q+PQ
Sbjct: 65 SELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ 124
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
NV ++T++++ +S+ + ++ +E M V P+ Y + VL++C ++ +
Sbjct: 125 RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV----RM 180
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V ++++D+++K G+ E A VFDEM D WNS++ + N
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240
Query: 184 SQRAVEVLESMRVDG--------------C-------------------EPDVVTRNTVM 210
S A+E+ + M+ G C + D++ N ++
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALV 300
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D YC+ G + +A +VF Q+K+ +VI+W+T+ISG + G +L +F M + G P+
Sbjct: 301 DMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG-TKPNY 359
Query: 271 GALSGVLVSCRCLGALASG 289
+ GVL +C G L G
Sbjct: 360 ITIVGVLFACSHAGLLEDG 378
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 15/283 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+S+L++C+ ++ + LH ++ G F + LI ++A + A S+F ++
Sbjct: 166 SSVLRSCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ + SI+ +++ + +E + M+ G + VL+AC LA LLE
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA-LLELGMQ 281
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
DL + N+++DMY KCG +E A RVF++M+ERDV +W++M+S NG
Sbjct: 282 AHVHIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
SQ A+++ E M+ G +P+ +T V+ A GL+ + F +K DP +
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG 399
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+I G+ ++ + EM + PDA +L +CR
Sbjct: 400 CMIDLLGKAGKLDDAVKLLNEMECE----PDAVTWRTLLGACR 438
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 12/173 (6%)
Query: 152 DVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRN 207
D+ A + D ++ D +++ ++ C + N + + +G P + N
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+++ Y + L+++A ++F+Q+ NVISWTT+IS YS H +L + M+ D V
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN-VR 159
Query: 268 PDAGALSGVLVSCRCLGALASGKEIH-GYGLKIMPGEIFYRSAGAALLTLYAR 319
P+ S VL SC ++ + +H G + + ++F RS AL+ ++A+
Sbjct: 160 PNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRS---ALIDVFAK 206
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 158/351 (45%), Gaps = 40/351 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+L++ C ++ + +++ L S + ++ +L A +F ++ +
Sbjct: 99 ALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSER 158
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRF-KGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N+F++ ++ +++ G + + Y M + GV PD Y FP VL+ C + L
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV 218
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V N+++ MY KCGDV+ A +FD M RD+ SWN+M+S Y NG+
Sbjct: 219 HVHVVRYGYEL-DIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGM 277
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDA------------------------------- 212
+E+ +MR +PD++T +V+ A
Sbjct: 278 CHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNS 337
Query: 213 ----YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
Y G EA K+F +++ +++SWTT+ISGY ++ +R M D V P
Sbjct: 338 LTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS-VKP 396
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D ++ VL +C LG L +G E+H L I I Y L+ +Y++
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELH--KLAIKARLISYVIVANNLINMYSK 445
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 156/350 (44%), Gaps = 42/350 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ C L + K++H +++ +G LI +Y C D++SA LF ++P+ +
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ ++++ + +G+ + +E + MR V PD V+ AC +L
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC-ELLGDRRLGRDIH 320
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D+ VCNS+ MY G A ++F M +D+ SW +M+S Y N L
Sbjct: 321 AYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPD 380
Query: 186 RAVEVLESMRVDGCEPD-----------------------------------VVTRNTVM 210
+A++ M D +PD V+ N ++
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
+ Y + + +A +F I NVISWT++I+G R +L R+M + P+A
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM--KMTLQPNA 498
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPG-EIFYRSAGAALLTLYAR 319
L+ L +C +GAL GKEIH + L+ G + F + ALL +Y R
Sbjct: 499 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN---ALLDMYVR 545
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 127/314 (40%), Gaps = 37/314 (11%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M L S++ AC + +H Y++ G L Q+Y + R A LF +
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ + ++ ++T++++ + + L + I+TY M V PD VL ACA L L+
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGD-LDT 416
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ V N++++MYSKC ++ A +F + ++V SW S+++
Sbjct: 417 GVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRL 476
Query: 181 NGLSQRAVEVLESMRV----------------------------------DGCEPDVVTR 206
N A+ L M++ G D
Sbjct: 477 NNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP 536
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
N ++D Y R G ++ A F K +V SW L++GYS G+ + + +F MV V
Sbjct: 537 NALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVK-SRV 594
Query: 267 FPDAGALSGVLVSC 280
PD +L C
Sbjct: 595 RPDEITFISLLCGC 608
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 15/283 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L AC+ L+ +LH + LI +Y+ C + A +F +P+
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS--PDGYVFPKVLKACAQLAALLEXXX 122
NV ++TSI+A L +C E +R ++ P+ L ACA++ AL+
Sbjct: 463 NVISWTSIIAGLR---LNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKE 519
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D + N++LDMY +CG + A F+ +++DV SWN +++ Y G
Sbjct: 520 IHAHVLRTGVGLDDF-LPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERG 577
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWT 238
VE+ + M PD +T +++ + +V + F +++D PN+ +
Sbjct: 578 QGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYA 637
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
++ +GR G L + + V PD +L +CR
Sbjct: 638 CVV---DLLGRAG-ELQEAHKFIQKMPVTPDPAVWGALLNACR 676
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 157/358 (43%), Gaps = 76/358 (21%)
Query: 14 KSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN--VFAFTS 71
K+++Q K +H +L G T+ LI Y L A SL R+ P + V+ + S
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNL-TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXX 131
++ + +G A +C+ + M +PD Y FP V KAC ++++ +
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISS-VRCGESAHALSLVT 156
Query: 132 XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVL 191
++ V N+++ MYS+C + A +VFDEM DV SWNS++ Y G + A+E+
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 192 ESMRVD-GCEPDVVTR-----------------------------------NTVMDAYCR 215
M + GC PD +T N ++D Y +
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 216 MGLVSEASKVFEQIKDPNVISWTTLISGYSSVGR-------------------------- 249
G++ EA+ VF + +V+SW +++GYS +GR
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 250 ------HGV---SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
G+ +LG+ R+M++ G + P+ L VL C +GAL GKEIH Y +K
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 393
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 136/304 (44%), Gaps = 20/304 (6%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLH-------GSHRKPFFTTKLIQIYADCDDLRSAH 55
L S+L C++ +L K++H Y + + G + +LI +YA C + +A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 56 SLFRQL--PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG--VSPDGYVFPKVLKAC 111
++F L + +V +T ++ +S+HG A + +E +EM + P+ + L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSW 171
A LAAL L V N ++DMY+KCG + A VFD M ++ +W
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTW 547
Query: 172 NSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK- 230
S+M+ Y +G + A+ + + MR G + D VT V+ A G++ + + F ++K
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 231 ----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
P + L+ GR +L + EM + P L CR G +
Sbjct: 608 VFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME----PPPVVWVAFLSCCRIHGKV 663
Query: 287 ASGK 290
G+
Sbjct: 664 ELGE 667
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 150/373 (40%), Gaps = 88/373 (23%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++L C++ + + KQLH + + + F L+ +YA C + A+++F +
Sbjct: 232 LVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS 291
Query: 63 QPNVFAFTSILAFHS-----------------------------------RHGLARQCIE 87
+V ++ +++A +S + GL + +
Sbjct: 292 VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 88 TYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR--------- 138
+M G+ P+ VL CA + AL+ DLR
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMH---GKEIHCYAIKYPIDLRKNGHGDENM 408
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEM--RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
V N ++DMY+KC V+ A +FD + +ERDV +W M+ Y +G + +A+E+L M
Sbjct: 409 VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 197 DGCE--PDVVT------------------------------------RNTVMDAYCRMGL 218
+ C+ P+ T N ++D Y + G
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGS 528
Query: 219 VSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLV 278
+S+A VF+ + N ++WT+L++GY G +LGIF EM G D L VL
Sbjct: 529 ISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL-DGVTLLVVLY 587
Query: 279 SCRCLGALASGKE 291
+C G + G E
Sbjct: 588 ACSHSGMIDQGME 600
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
V G +V N ++ Y R +S+A KVF+++ +V+SW ++I Y+ +G+ V+L
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALL 314
+F M N+ PD L VL C LG + GK++H + + M +F G L+
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF---VGNCLV 271
Query: 315 TLYAR 319
+YA+
Sbjct: 272 DMYAK 276
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 148/312 (47%), Gaps = 36/312 (11%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
++LL AC ++L +++H +M+ + T+L+ Y CD L A + ++P+
Sbjct: 56 DALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE 115
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
NV ++T++++ +S+ G + + + +AEM P+ + F VL +C + A+ L
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR-ASGLGLGKQ 174
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ V +S+LDMY+K G ++ A +F+ + ERDV S ++++ Y GL
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 184 SQRAVEVLESMRVDGCEPDVVT-----------------------------------RNT 208
+ A+E+ + +G P+ VT +N+
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D Y + G +S A ++F+ + + ISW ++ GYS G L +FR M ++ V P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 269 DAGALSGVLVSC 280
DA L VL C
Sbjct: 355 DAVTLLAVLSGC 366
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 144/305 (47%), Gaps = 14/305 (4%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L +C + L KQ+H ++ F + L+ +YA ++ A +F LP+
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + T+I+A +++ GL + +E + + +G+SP+ + +L A + LA LL+
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLA-LLDHGKQA 276
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ NS++DMYSKCG++ A R+FD M ER SWN+M+ Y +GL
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 185 QRAVEVLESMRVDG-CEPDVVTRNTVMDAYCRMGLVSEAS-KVFEQI------KDPNVIS 236
+ +E+ MR + +PD VT V+ C G + + +F+ + P
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSG-CSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYG 296
+ ++ GR + + M + P AG L +L +CR ++ G+ +
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSK----PTAGVLGSLLGACRVHLSVDIGESVGRRL 451
Query: 297 LKIMP 301
++I P
Sbjct: 452 IEIEP 456
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 148/292 (50%), Gaps = 10/292 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S +++C ++ H L G + + L+ +Y D ++ +A+ +F ++P
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ NV ++T++++ ++ C++ Y++MR P+ Y F +L AC AL +
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRS 242
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
L + NS++ MY KCGD++ A R+FD+ +DV SWNSM++ Y +G
Sbjct: 243 VHCQTLHMGLKSY-LHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHG 301
Query: 183 LSQRAVEVLE-SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISW 237
L+ +A+E+ E M G +PD +T V+ + GLV E K F + + P + +
Sbjct: 302 LAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHY 361
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
+ L+ +GR G+ L E++ + + P++ +L SCR G + +G
Sbjct: 362 SCLV---DLLGRFGL-LQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTG 409
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 35/192 (18%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D+ + +S++ +Y G+VE A +VF+EM ER+V SW +M+S + +++ MR
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 196 VDGCEPDVVT-----------------------------------RNTVMDAYCRMGLVS 220
+P+ T N+++ YC+ G +
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+A ++F+Q + +V+SW ++I+GY+ G ++ +F M+ PDA GVL SC
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 281 RCLGALASGKEI 292
R G + G++
Sbjct: 334 RHAGLVKEGRKF 345
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
DV ++++ Y G V A KVFE++ + NV+SWT +ISG++ R + L ++ +M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKM- 212
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
P+ + +L +C GAL G+ +H L + G Y +L+++Y +
Sbjct: 213 RKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHM--GLKSYLHISNSLISMYCK 268
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 156/349 (44%), Gaps = 49/349 (14%)
Query: 11 SASKSLNQAKQLHHYM-----LLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
S SK Q+H ++ LL+GS + LI ++ A +F +LPQ
Sbjct: 25 SISKLKRHITQIHAFVISTGNLLNGSS----ISRDLIASCGRIGEISYARKVFDELPQRG 80
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V + S++ +SR + + Y +M + + PD F +KAC +LE
Sbjct: 81 VSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLS-GLVLEKGEAVW 139
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D+ VC+SVL++Y KCG ++ A +F +M +RDV W +M++ + G S
Sbjct: 140 CKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSL 199
Query: 186 RAVEVLESMRVDGCEPD-----------------------------------VVTRNTVM 210
+AVE M+ +G D VV +++
Sbjct: 200 KAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLV 259
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y ++G + AS+VF ++ +SW +LISG++ G + EM + G PD
Sbjct: 260 DMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQ-PDL 318
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L GVLV+C +G+L +G+ +H Y I+ + R AL+ +Y++
Sbjct: 319 VTLVGVLVACSQVGSLKTGRLVHCY---ILKRHVLDRVTATALMDMYSK 364
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 151/352 (42%), Gaps = 47/352 (13%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
++AC + L + + + + G F + ++ +Y C + A LF ++ + +V
Sbjct: 123 IKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDV 182
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+T+++ ++ G + + +E Y EM+ +G D V +L+A L +
Sbjct: 183 ICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDT-KMGRSVHG 241
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
++ V S++DMY+K G +E A+RVF M + SW S++S + NGL+ +
Sbjct: 242 YLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANK 301
Query: 187 AVEVLESMRVDGCEPDV----------------------------------VTRNTVMDA 212
A E + M+ G +PD+ VT +MD
Sbjct: 302 AFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDM 361
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
Y + G +S + ++FE + +++ W T+IS Y G + +F +M + PD
Sbjct: 362 YSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESN-IEPDHAT 420
Query: 273 LSGVLVSCRCLGALASGKE-----IHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ +L + G + G+ I+ Y KI P E Y L+ L AR
Sbjct: 421 FASLLSALSHSGLVEQGQHWFSVMINKY--KIQPSEKHY----VCLIDLLAR 466
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 2/221 (0%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LLQA + +H Y+ G T L+ +YA + A +F ++
Sbjct: 223 LLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKT 282
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++ S+++ +++GLA + E EM+ G PD VL AC+Q+ +L
Sbjct: 283 AVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL--KTGRLV 340
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D +++DMYSKCG + + +F+ + +D+ WN+M+SCY +G Q
Sbjct: 341 HCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQ 400
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
V + M EPD T +++ A GLV + F
Sbjct: 401 EVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWF 441
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 4/250 (1%)
Query: 20 KQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRH 79
+QLH Y+ HG + L++ Y D L AH +F ++P P+V ++ S+++ + +
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 80 GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
G ++ I + E+ V P+ + F L ACA+L ++ V
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
N ++DMY KCG ++ A VF M E+D SWN++++ NG + + M
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP---- 250
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
PD VT N ++DA+ + G + A +V + +PN SW T+++GY + + G + F +
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 260 MVNDGMVFPD 269
M + G+ F +
Sbjct: 311 MHSSGVRFDE 320
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 36/218 (16%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+++ +CS + L H M + +LI + D +A + +P
Sbjct: 227 NAIVASCSRNGKLELGLWFFHQM----PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPN 282
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYV---------------FPKVL 108
PN ++ +IL + + + E + +M GV D Y + ++
Sbjct: 283 PNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLI 342
Query: 109 KACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV 168
ACA L + V ++++DMYSKCG ++ A +F M +++
Sbjct: 343 HACAHKLGL----------------DSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNL 386
Query: 169 FSWNSMMSCYVCNGLSQRAVEVLESMRVDG-CEPDVVT 205
WN M+S Y NG S A+++ ++ + +PD T
Sbjct: 387 IVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFT 424
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 16/290 (5%)
Query: 6 LLQACSASK----SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
+L+AC AS+ L + K++H ++ G + T L+ +YA + A +F +
Sbjct: 184 VLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM 243
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEM--RFKGVSPDGYVFPKVLKACAQLAALLE 119
P NV ++++++A ++++G A + + T+ EM K SP+ VL+ACA LAAL E
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAAL-E 302
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
L V ++++ MY +CG +E RVFD M +RDV SWNS++S Y
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG 362
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-KD----PNV 234
+G ++A+++ E M +G P VT +V+ A GLV E ++FE + +D P +
Sbjct: 363 VHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQI 422
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
+ ++ R L +MV D P +L SCR G
Sbjct: 423 EHYACMVDLLGRANR----LDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 141/327 (43%), Gaps = 41/327 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+ C SL+ A ++H ++L +GS + PF TKLI +Y+D + A +F + +
Sbjct: 83 LILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRT 142
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ---LAALLEXXX 122
++ + ++ + G + + Y +M GV D + + VLKAC L
Sbjct: 143 IYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGK 202
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ + +++DMY++ G V+ A+ VF M R+V SW++M++CY NG
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNG 262
Query: 183 LSQRAVEVLESM--RVDGCEPDVVTRNTVMDA---------------------------- 212
+ A+ M P+ VT +V+ A
Sbjct: 263 KAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPV 322
Query: 213 -------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
Y R G + +VF+++ D +V+SW +LIS Y G ++ IF EM+ +G
Sbjct: 323 ISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG- 381
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEI 292
P VL +C G + GK +
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRL 408
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 10/226 (4%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+LQAC++ +L Q K +H Y+L G + L+ +Y C L +F ++
Sbjct: 290 SVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR 349
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++ S+++ + HG ++ I+ + EM G SP F VL AC+ + E
Sbjct: 350 DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLF 409
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMM-SCYVCNG 182
+ ++D+ + ++ AA++ +MR E W S++ SC +
Sbjct: 410 ETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGN 469
Query: 183 --LSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKV 225
L++RA S R+ EP ++ D Y + E +V
Sbjct: 470 VELAERA-----SRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRV 510
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 39/322 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+ C + ++++ ++HH + + ++KL+++YA C AH +F ++ +
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 65 NV--FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ FA+ S+++ ++ G + Y +M GV PD + FP+VLKAC + ++ +
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSV-QIGE 215
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V N+++ MY+KCGD+ A VFD + +D SWNSM++ Y+ +G
Sbjct: 216 AIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG 275
Query: 183 LSQRAVEVLESMRVDGCEPD-----------------------VVTR---------NTVM 210
L A+++ M +G EPD V+ R N ++
Sbjct: 276 LLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALI 335
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
Y + G + +A +F+Q+ + + +SW +IS +S ++ L F +M + PD
Sbjct: 336 VLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHS---KNSNGLKYFEQM-HRANAKPDG 391
Query: 271 GALSGVLVSCRCLGALASGKEI 292
VL C G + G+ +
Sbjct: 392 ITFVSVLSLCANTGMVEDGERL 413
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 110/248 (44%), Gaps = 12/248 (4%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC S+ + +H ++ G + L+ +YA C D+ A ++F +P +
Sbjct: 201 VLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++ S+L + HGL + ++ + M G+ PD VL +
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSF----KHGRQLH 316
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+L V N+++ +YSK G + A +FD+M ERD SWN+++S + N
Sbjct: 317 GWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS--- 373
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
++ E M +PD +T +V+ G+V + ++F + DP + + +
Sbjct: 374 NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACM 433
Query: 241 ISGYSSVG 248
++ Y G
Sbjct: 434 VNLYGRAG 441
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 121/271 (44%), Gaps = 46/271 (16%)
Query: 86 IETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLD 145
+ET A+ P+ +F +L+ C L A+ + +L + + ++
Sbjct: 79 LETSAQKGISLTEPE--IFASLLETCYSLRAI-DHGVRVHHLIPPYLLRNNLGISSKLVR 135
Query: 146 MYSKCGDVEGAARVFDEMRERDV--FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDV 203
+Y+ CG E A VFD M +RD F+WNS++S Y G + A+ + M DG +PD
Sbjct: 136 LYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDR 195
Query: 204 VTRNTVMDA-----------------------------------YCRMGLVSEASKVFEQ 228
T V+ A Y + G + +A VF+
Sbjct: 196 FTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDM 255
Query: 229 IKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALAS 288
I + +SW ++++GY G +L IFR MV +G + PD A+S VL R L +
Sbjct: 256 IPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNG-IEPDKVAISSVL--ARVL-SFKH 311
Query: 289 GKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G+++HG+ ++ G + S AL+ LY++
Sbjct: 312 GRQLHGWVIR--RGMEWELSVANALIVLYSK 340
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 79/150 (52%), Gaps = 17/150 (11%)
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV-- 209
D+E +A+ + E ++F+ + + +CY S RA++ +RV P + RN +
Sbjct: 78 DLETSAQKGISLTEPEIFA-SLLETCY-----SLRAID--HGVRVHHLIPPYLLRNNLGI 129
Query: 210 ----MDAYCRMGLVSEASKVFEQI--KDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
+ Y G A +VF+++ +D + +W +LISGY+ +G++ ++ ++ +M D
Sbjct: 130 SSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAED 189
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIH 293
G V PD VL +C +G++ G+ IH
Sbjct: 190 G-VKPDRFTFPRVLKACGGIGSVQIGEAIH 218
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 156/331 (47%), Gaps = 40/331 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL +A++S+++ K LH +++ G +T L YA C + A LF ++PQ
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEEMPQS 78
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS--PDGYVFPKVLKACAQLAALLEXXX 122
++ ++ ++ + R GL I + M +GV PDGY +P V KA +L + ++
Sbjct: 79 SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKS-MKLGL 137
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V N++L MY G VE A VFD M+ RDV SWN+M+S Y NG
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-----------------------------------RN 207
A+ + + M + + D T +N
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+++ Y + G + EA VF++++ +VI+WT +I+GY+ G +L + R M +G V
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG-VR 316
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
P+A ++ ++ C + GK +HG+ ++
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 129/324 (39%), Gaps = 41/324 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L C K L + +H + K L+ +Y C + A +F ++ +
Sbjct: 223 SMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR 282
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V +T ++ ++ G +E M+F+GV P+ ++ C A +
Sbjct: 283 DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD-ALKVNDGKCL 341
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ + S++ MY+KC V+ RVF + W+++++ V N L
Sbjct: 342 HGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELV 401
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRM---------------------------- 216
A+ + + MR + EP++ T N+++ AY +
Sbjct: 402 SDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGL 461
Query: 217 -------GLVSEASKVF----EQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
G + A K+F E+ K +V+ W LISGY G +L +F EMV G
Sbjct: 462 VHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG- 520
Query: 266 VFPDAGALSGVLVSCRCLGALASG 289
V P+ + L +C G + G
Sbjct: 521 VTPNEITFTSALNACSHSGLVEEG 544
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 138/347 (39%), Gaps = 39/347 (11%)
Query: 8 QACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVF 67
+A KS+ +H +L R + L+ +Y + + A +F + +V
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 68 AFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
++ ++++ + R+G + + M + V D +L C L L E
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDL-EMGRNVHKL 243
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA 187
+ V N++++MY KCG ++ A VFD M RDV +W M++ Y +G + A
Sbjct: 244 VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENA 303
Query: 188 VEVLESMRVDGCEPDVVTRNT----------VMDAYCRMG----------LVSEAS---- 223
+E+ M+ +G P+ VT + V D C G ++ E S
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISM 363
Query: 224 -----------KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
+VF + W+ +I+G +LG+F+ M + V P+
Sbjct: 364 YAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED-VEPNIAT 422
Query: 273 LSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L+ +L + L L IH Y K G + A L+ +Y++
Sbjct: 423 LNSLLPAYAALADLRQAMNIHCYLTK--TGFMSSLDAATGLVHVYSK 467
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 5/226 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SL+ C + +N K LH + + + T LI +YA C + +F +
Sbjct: 324 SLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKY 383
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ +++I+A ++ L + + MR + V P+ +L A A LA L +
Sbjct: 384 HTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIH 443
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVC 180
L ++ +YSKCG +E A ++F+ ++E+ DV W +++S Y
Sbjct: 444 CYLTKTGFMS-SLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
+G A++V M G P+ +T + ++A GLV E +F
Sbjct: 503 HGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLF 548
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
LNSLL A +A L QA +H Y+ G T L+ +Y+ C L SAH +F +
Sbjct: 423 LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 63 Q----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+ +V + ++++ + HG ++ + EM GV+P+ F L AC+
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 141/322 (43%), Gaps = 37/322 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L + ACS L + K++H + G + + L+ +Y CD L A +F+++P
Sbjct: 211 LTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP 270
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ A+ S++ + G ++ C+E M +G P +L AC++ LL
Sbjct: 271 RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLH-GK 329
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V S++D+Y KCG+ A VF + ++ SWN M+S Y+ G
Sbjct: 330 FIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVG 389
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTV--------------------------------- 209
+AVEV + M G +PDVVT +V
Sbjct: 390 NWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLS 449
Query: 210 --MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+D Y + G EA ++F I +V+SWT +IS Y S G+ +L F EM G+
Sbjct: 450 ALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK- 508
Query: 268 PDAGALSGVLVSCRCLGALASG 289
PD L VL +C G + G
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEG 530
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 164/355 (46%), Gaps = 42/355 (11%)
Query: 3 LNSLLQACS-ASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L SLL+ C+ ++KSL + K +H +L G R LI +Y C D SA +F
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 62 P-QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLAALLE 119
+ +V+ + S+++ +S++ + +E + + + PD + FP V+KA L
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREF- 124
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ V +S++ MY+K E + +VFDEM ERDV SWN+++SC+
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVT---------------------------------- 205
+G +++A+E+ M G EP+ V+
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 206 -RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
+ ++D Y + + A +VF+++ ++++W ++I GY + G + I M+ +G
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
P L+ +L++C L GK IHGY ++ + Y +L+ LY +
Sbjct: 305 -TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY--VNCSLIDLYFK 356
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 8/285 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L ACS S++L K +H Y++ + + LI +Y C + A ++F +
Sbjct: 312 LTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ 371
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ +++ + G + +E Y +M GV PD F VL AC+QLAAL E
Sbjct: 372 KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL-EKGK 430
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D + +++LDMYSKCG+ + A R+F+ + ++DV SW M+S Y +G
Sbjct: 431 QIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHG 490
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
+ A+ + M+ G +PD VT V+ A GL+ E K F Q++ I +I
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE--PIIE 548
Query: 243 GYSS----VGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
YS +GR G L + E++ D L L S CL
Sbjct: 549 HYSCMIDILGRAGRLLEAY-EIIQQTPETSDNAELLSTLFSACCL 592
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
+ L+ +YA + ++ +F ++P+ +V ++ ++++ + G A + +E + M G
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
P+ + AC++L LE D V ++++DMY KC +E A
Sbjct: 206 PNSVSLTVAISACSRLL-WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVARE 264
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP----------------- 201
VF +M + + +WNSM+ YV G S+ VE+L M ++G P
Sbjct: 265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRN 324
Query: 202 ------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISG 243
D+ +++D Y + G + A VF + + SW +IS
Sbjct: 325 LLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISS 384
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
Y SVG ++ ++ +MV+ G V PD + VL +C L AL GK+IH
Sbjct: 385 YISVGNWFKAVEVYDQMVSVG-VKPDVVTFTSVLPACSQLAALEKGKQIH 433
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 43/333 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LLQ CS + + +Q+H Y+L G LI +Y+ L + +F + N
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACA------------- 112
+ ++ SIL+ +++ G I EM G+ PD + +L A
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 113 --QLAAL-------------------LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
Q+A L L+ D+ V +++DMY K G
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG 274
Query: 152 DVEGAARVFDEMRERDVFSWNSMMS--CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
+ A VFD M +++ +WNS++S Y C L + A ++ M +G +PD +T N++
Sbjct: 275 YLPYARMVFDMMDAKNIVAWNSLVSGLSYAC--LLKDAEALMIRMEKEGIKPDAITWNSL 332
Query: 210 MDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
Y +G +A V ++K+ PNV+SWT + SG S G +L +F +M +G
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG- 391
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
V P+A +S +L CL L SGKE+HG+ L+
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLR 424
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 36/262 (13%)
Query: 45 YADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVF 104
Y C L A+ LF ++P+ + A+ I+ + R G + +E + EM+F G
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 105 PKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR 164
K+L+ C+ E ++ +CNS++ MYS+ G +E + +VF+ M+
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLES-NVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 165 ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASK 224
+R++ SWNS++S Y G A+ +L+ M + G +PD+VT N+++ Y GL +A
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 225 VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
V ++++ I+G P ++S +L + G
Sbjct: 212 VLKRMQ----------IAGLK----------------------PSTSSISSLLQAVAEPG 239
Query: 285 ALASGKEIHGYGLKIMPGEIFY 306
L GK IHGY I+ +++Y
Sbjct: 240 HLKLGKAIHGY---ILRNQLWY 258
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 14/287 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NSL+ S + L A+ L M G L YA A + ++ +
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
PNV ++T+I + S++G R ++ + +M+ +GV P+ +LK L+ LL
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLS-LLH 413
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D V +++DMY K GD++ A +F ++ + + SWN M+ Y
Sbjct: 414 SGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYA 473
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNV 234
G + + M G EPD +T +V+ GLV E K F+ ++ P +
Sbjct: 474 MFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTI 533
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ ++ +GR G L + + + PDA L SC+
Sbjct: 534 EHCSCMV---DLLGRSGY-LDEAWDFIQTMSLKPDATIWGAFLSSCK 576
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 128/331 (38%), Gaps = 86/331 (25%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++SLLQA + L K +H Y+L + + T LI +Y L A +F +
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAE-----MRFKGVSPDGYVFPKVLKACAQLAAL 117
N+ A+ S+++ GL+ C+ AE M +G+ PD +
Sbjct: 288 AKNIVAWNSLVS-----GLSYACLLKDAEALMIRMEKEGIKPDAITW------------- 329
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNS 173
NS+ Y+ G E A V +M+E+ +V SW +
Sbjct: 330 -----------------------NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM----------------------- 210
+ S NG + A++V M+ +G P+ T +T++
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 211 ------------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
D Y + G + A ++F IK+ ++ SW ++ GY+ GR + F
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
M+ GM PDA + VL C+ G + G
Sbjct: 487 VMLEAGME-PDAITFTSVLSVCKNSGLVQEG 516
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 164/350 (46%), Gaps = 40/350 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SL+ ACS+S+SL Q +++H ++L ++ +Y C LR A +F +P+
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N+ ++TS++ +S++G + I Y +M + + PD + F ++KACA ++ +
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS-SSDVGLGKQL 190
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
L N+++ MY + + A+RVF + +D+ SW+S+++ + G
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 185 QRAVEVLESMRVDGC-------------------EPD-----------------VVTRNT 208
A+ L+ M G PD + +
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCS 310
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+ D Y R G ++ A +VF+QI+ P+ SW +I+G ++ G ++ +F +M + G + P
Sbjct: 311 LCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI-P 369
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYA 318
DA +L +L + AL+ G +IH Y +K G + + +LLT+Y
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKW--GFLADLTVCNSLLTMYT 417
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 145/322 (45%), Gaps = 14/322 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL- 61
L SLL A + +L+Q Q+H Y++ G L+ +Y C DL +LF
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ ++ +IL +H + + + M PD +L+ C ++++L +
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL-KLG 492
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
+ + N ++DMY+KCG + A R+FD M RDV SW++++ Y +
Sbjct: 493 SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQS 552
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT-- 239
G + A+ + + M+ G EP+ VT V+ A +GLV E K++ ++ + IS T
Sbjct: 553 GFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEH 612
Query: 240 ---LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYG 296
++ + GR L +++ + PD +L +C+ G + ++
Sbjct: 613 CSCVVDLLARAGR----LNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENI 668
Query: 297 LKIMPGEIFYRSAGAALLTLYA 318
LKI P F +A L +++A
Sbjct: 669 LKIDP---FNSTAHVLLCSMHA 687
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 152/353 (43%), Gaps = 43/353 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+++AC++S + KQLH ++ S LI +Y + + A +F +P
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK 232
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGV-SPDGYVFPKVLKACAQLAALLEXXXX 123
++ +++SI+A S+ G + + EM GV P+ Y+F LKAC+ L
Sbjct: 233 DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI 292
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ C S+ DMY++CG + A RVFD++ D SWN +++ NG
Sbjct: 293 HGLCIKSELAGNAIAGC-SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGY 351
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKV------------------ 225
+ AV V MR G PD ++ +++ A + +S+ ++
Sbjct: 352 ADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNS 411
Query: 226 -----------------FEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
FE + + + +SW T+++ + L +F+ M+
Sbjct: 412 LLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE- 470
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
PD + +L C + +L G ++H Y LK + E F ++ L+ +YA+
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKN---GLIDMYAK 520
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D + N +L MY KCG + A VFD M ER++ S+ S+++ Y NG A+ + M
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 196 VDGCEPD-----------------------------------VVTRNTVMDAYCRMGLVS 220
+ PD ++ +N ++ Y R +S
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMS 220
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+AS+VF I ++ISW+++I+G+S +G +L +EM++ G+ P+ L +C
Sbjct: 221 DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 280
Query: 281 RCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
L G +IHG +K + G AG +L +YAR
Sbjct: 281 SSLLRPDYGSQIHGLCIKSELAGNAI---AGCSLCDMYAR 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIF 257
C+ D + N ++ Y + G + +A +VF+ + + N++S+T++I+GYS G+ ++ ++
Sbjct: 97 NCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLY 156
Query: 258 REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLY 317
+M+ + +V PD A ++ +C + GK++H +K+ + A AL+ +Y
Sbjct: 157 LKMLQEDLV-PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSS--HLIAQNALIAMY 213
Query: 318 AR 319
R
Sbjct: 214 VR 215
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 158/353 (44%), Gaps = 39/353 (11%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
+ + LL+ C +S++ K + +ML G +KL+ C D+ A +F +
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSG-FPAEISGSKLVDASLKCGDIDYARQVFDGM 125
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ ++ + S++A+ +H +++ +E Y M V PD Y V KA + L+ E
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
++ V ++++DMY K G A V D + E+DV +++ Y
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 245
Query: 182 GLSQRAVEVLESMRVDGCEPD-----------------------------------VVTR 206
G AV+ +SM V+ +P+ + ++
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+++ Y R LV ++ +VF+ I+ PN +SWT+LISG GR ++L FR+M+ D +
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS-I 364
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
P++ LS L C L G++IHG K G + AG+ L+ LY +
Sbjct: 365 KPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKY--GFDRDKYAGSGLIDLYGK 415
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 10/303 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L +C K + K +H M+ G T L+ +Y C + + +F+ + P
Sbjct: 272 SVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYP 331
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N ++TS+++ ++G + + +M + P+ + L+ C+ LA + E
Sbjct: 332 NQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLA-MFEEGRQI 390
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D + ++D+Y KCG + A VFD + E DV S N+M+ Y NG
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 450
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI----SWTTL 240
+ A+++ E M G +P+ VT +V+ A LV E ++F+ + ++ + +
Sbjct: 451 REALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACM 510
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIM 300
+ GR + EM+ ++ PD +L +C+ + + I L+I
Sbjct: 511 VDLLGRAGRLEEA-----EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIE 565
Query: 301 PGE 303
PG+
Sbjct: 566 PGD 568
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 108/249 (43%), Gaps = 19/249 (7%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S L+ CS + +Q+H + +G R + + LI +Y C A +F L
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS 430
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX-- 120
+ +V + +++ ++++G R+ ++ + M G+ P+ VL AC + L+E
Sbjct: 431 EVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN-SRLVEEGC 489
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS-CYV 179
D C ++D+ + G +E A + E+ D+ W +++S C V
Sbjct: 490 ELFDSFRKDKIMLTNDHYAC--MVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKV 547
Query: 180 CNGLSQRAVEVLESM--RVDGCEP-DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV-- 234
R VE+ E + ++ EP D T + + Y G + ++ ++KD +
Sbjct: 548 -----HRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKK 602
Query: 235 ---ISWTTL 240
+SW +
Sbjct: 603 NPAMSWVEI 611
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 136/268 (50%), Gaps = 14/268 (5%)
Query: 54 AHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
A S Q+ +PNVF + ++ + +E Y M VSP Y + ++KA +
Sbjct: 824 AVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF 883
Query: 114 LAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNS 173
+ E +++ +++D YS G + A +VFDEM ERD +W +
Sbjct: 884 ASRFGESLQAHIWKFGFGFH---VKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTT 940
Query: 174 MMSCYVCNGLSQRAVEV--LESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
M+S Y +R +++ S+ E + T N +++ Y +G + +A +F Q+
Sbjct: 941 MVSAY------RRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPV 994
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
++ISWTT+I GYS R+ ++ +F +M+ +G++ PD +S V+ +C LG L GKE
Sbjct: 995 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII-PDEVTMSTVISACAHLGVLEIGKE 1053
Query: 292 IHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+H Y L+ G + G+AL+ +Y++
Sbjct: 1054 VHMYTLQ--NGFVLDVYIGSALVDMYSK 1079
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 123/246 (50%), Gaps = 10/246 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
LI Y +L A SLF Q+P ++ ++T+++ +S++ R+ I + +M +G+ PD
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
V+ ACA L +LE D+ + ++++DMYSKCG +E A VF
Sbjct: 1032 EVTMSTVISACAHLG-VLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVF 1090
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
+ ++++F WNS++ +G +Q A+++ M ++ +P+ VT +V A GLV
Sbjct: 1091 FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVD 1150
Query: 221 EASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
E +++ + D NV + ++ +S G +L E++ + P+A
Sbjct: 1151 EGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEAL----ELIGNMEFEPNAVIWGA 1206
Query: 276 VLVSCR 281
+L CR
Sbjct: 1207 LLDGCR 1212
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+++++ AC+ L K++H Y L +G + + L+ +Y+ C L A +F LP
Sbjct: 1035 MSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP 1094
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ N+F + SI+ + HG A++ ++ +A+M + V P+ F V AC + E
Sbjct: 1095 KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR- 1153
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
R+ S++D YS +VE + M+ + G
Sbjct: 1154 ---------------RIYRSMIDDYSIVSNVE---------------HYGGMVHLFSKAG 1183
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRM 216
L A+E++ +M EP+ V ++D CR+
Sbjct: 1184 LIYEALELIGNMEF---EPNAVIWGALLDG-CRI 1213
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 153/355 (43%), Gaps = 46/355 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGS---HRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L + C + L +A+Q+H +L G+ P+ LI +Y C L A +F ++P
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 63 QPNVFAFTSILAFHSRH-GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
NV ++ ++ + +SR+ A M F+ V P+ F +++ CA L +L
Sbjct: 160 HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVL-MG 218
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
++ V SVL MYS CGD+E A R+FD + RD +WN+M+ + N
Sbjct: 219 SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 182 GLSQRAVEVLESMRVDGCEP-----------------------------------DVVTR 206
+ + +M + G +P D+
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
N ++D YC G + EA VF +I +PN++SW ++ISG S G ++ ++R ++
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRS--AGAALLTLYAR 319
PD S + + GK +HG K+ + RS G LL++Y +
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLG----YERSVFVGTTLLSMYFK 449
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 130/321 (40%), Gaps = 38/321 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L CS S + K +H +++ S L+ +Y C D+R A +F ++ PN
Sbjct: 306 VLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPN 365
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++ SI++ S +G Q + Y + R PD Y F + A A+ +
Sbjct: 366 LVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLH 425
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V ++L MY K + E A +VFD M+ERDV W M+ + G S
Sbjct: 426 GQVTKLGYER-SVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNS 484
Query: 185 QRAVEVL-----ESMRVDG---------CEPDVVTRN---------------------TV 209
+ AV+ E R DG C + R +
Sbjct: 485 ELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGAL 544
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + G A +F +P++ W +++ YS G +L F +++ +G + PD
Sbjct: 545 VDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFM-PD 603
Query: 270 AGALSGVLVSCRCLGALASGK 290
A +L +C G+ GK
Sbjct: 604 AVTYLSLLAACSHRGSTLQGK 624
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 146/353 (41%), Gaps = 40/353 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
SL+Q C+ + + L+ ++ G T ++ +Y+ C DL SA +F +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ A+ +++ ++ + + M GV P + + VL C++L +
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS-YSLGK 320
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
DL + N++LDMY CGD+ A VF + ++ SWNS++S NG
Sbjct: 321 LIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENG 380
Query: 183 LSQRAVEV------LESMRVD------------------------------GCEPDVVTR 206
++A+ + + + R D G E V
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
T++ Y + A KVF+ +K+ +V+ WT +I G+S +G +++ F EM +
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNR 500
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D +LS V+ +C + L G+ H L I G S AL+ +Y +
Sbjct: 501 -SDGFSLSSVIGACSDMAMLRQGEVFH--CLAIRTGFDCVMSVCGALVDMYGK 550
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
+ A + + K LH + G R F T L+ +Y + SA +F + + +V
Sbjct: 409 ISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDV 468
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+T ++ HSR G + ++ + EM + DG+ V+ AC+ +A +L
Sbjct: 469 VLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMA-MLRQGEVFHC 527
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
+ VC +++DMY K G E A +F D+ WNSM+ Y +G+ ++
Sbjct: 528 LAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEK 587
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
A+ E + +G PD VT +++ A G + ++ Q+K+ +
Sbjct: 588 ALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGI 635
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 155/322 (48%), Gaps = 16/322 (4%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQ--IYADCDDLRSAHSLFR 59
H SLL +C K+L Q+H + +G +FT KLI + D L A L
Sbjct: 7 HCLSLLNSC---KNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLL 63
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALL 118
P+P+ F F +++ +S + + EM KG V PD + F V+KA +L
Sbjct: 64 CFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL- 122
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS-C 177
L V +++ MY CG VE A +VFDEM + ++ +WN++++ C
Sbjct: 123 RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC 182
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISW 237
+ N ++ A E+ + M V + + N ++ Y + G + A ++F ++ + +SW
Sbjct: 183 FRGNDVAG-AREIFDKMLVR----NHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 237
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
+T+I G + G S FRE+ GM P+ +L+GVL +C G+ GK +HG+
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGMS-PNEVSLTGVLSACSQSGSFEFGKILHGFVE 296
Query: 298 KIMPGEIFYRSAGAALLTLYAR 319
K G + S AL+ +Y+R
Sbjct: 297 K--AGYSWIVSVNNALIDMYSR 316
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 118/252 (46%), Gaps = 11/252 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+++ AC + A+++ ML+ R ++ Y +L SA +F ++P
Sbjct: 176 NAVITACFRGNDVAGAREIFDKMLV----RNHTSWNVMLAGYIKAGELESAKRIFSEMPH 231
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++++++ + +G + + E++ G+SP+ VL AC+Q + E
Sbjct: 232 RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSF-EFGKI 290
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSMMSCYVCNG 182
+ V N+++DMYS+CG+V A VF+ M+E R + SW SM++ +G
Sbjct: 291 LHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHG 350
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISW 237
+ AV + M G PD ++ +++ A GL+ E F ++K +P + +
Sbjct: 351 QGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY 410
Query: 238 TTLISGYSSVGR 249
++ Y G+
Sbjct: 411 GCMVDLYGRSGK 422
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 126/322 (39%), Gaps = 77/322 (23%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+++A +SL Q+H L HG F T LI +Y C + A +F ++ QPN
Sbjct: 112 VIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPN 171
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ A+ +++ A R V+ +F K+L
Sbjct: 172 LVAWNAVIT---------------ACFRGNDVAGAREIFDKML----------------- 199
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ N +L Y K G++E A R+F EM RD SW++M+ NG
Sbjct: 200 --------VRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFN 251
Query: 186 RAVEVLESMRVDGCEPDVVT-----------------------------------RNTVM 210
+ ++ G P+ V+ N ++
Sbjct: 252 ESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALI 311
Query: 211 DAYCRMGLVSEASKVFEQIKDPN-VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
D Y R G V A VFE +++ ++SWT++I+G + G+ ++ +F EM G V PD
Sbjct: 312 DMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG-VTPD 370
Query: 270 AGALSGVLVSCRCLGALASGKE 291
+ +L +C G + G++
Sbjct: 371 GISFISLLHACSHAGLIEEGED 392
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 141/301 (46%), Gaps = 10/301 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRS-AHSLFRQL 61
L S+L ACS + H + G + F L+ +YA C + +F L
Sbjct: 141 LASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL 200
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVL------KACAQLA 115
QPN ++T+++ +R + ++ + M KGV D +L + C L+
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 260
Query: 116 ALL--EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNS 173
+ E DL + NS+L++Y+K D+ GA +F EM E +V SWN
Sbjct: 261 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
M+ + S ++VE L MR G +P+ VT +V+ A R G V ++F I P+
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPS 380
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
V +W ++SGYS+ + ++ FR+M + PD LS +L SC L L GK+IH
Sbjct: 381 VSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLK-PDKTTLSVILSSCARLRFLEGGKQIH 439
Query: 294 G 294
G
Sbjct: 440 G 440
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 40/185 (21%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D +CN +LD+Y +CGD + A +VFDEM RDV+SWN+ ++
Sbjct: 40 DTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLT------------------- 80
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
C++G + EA +VF+ + + +V+SW +IS G +L
Sbjct: 81 ----------------FRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALV 124
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALL 314
+++ MV DG + P L+ VL +C + G HG +K + IF G ALL
Sbjct: 125 VYKRMVCDGFL-PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIF---VGNALL 180
Query: 315 TLYAR 319
++YA+
Sbjct: 181 SMYAK 185
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 136/307 (44%), Gaps = 14/307 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ-L 61
L+ +L +C+ + L KQ+H ++ + + LI +Y++C+ + + +F +
Sbjct: 419 LSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCI 478
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGV-SPDGYVFPKVLKACAQLAALLEX 120
+ ++ + S+++ + L + + + M V P+ F VL +C++L +LL
Sbjct: 479 NELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG 538
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D V ++ DMY KCG+++ A + FD + ++ WN M+ Y
Sbjct: 539 RQFHGLVVKSGYVS-DSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGH 597
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVI 235
NG AV + M G +PD +T +V+ A GLV ++ ++ +P +
Sbjct: 598 NGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELD 657
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLV-SCRCLGALASGKEIHG 294
+ ++ GR + E + + + + L +L+ SCR G ++ + +
Sbjct: 658 HYICIVDCLGRAGRLEDA-----EKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAE 712
Query: 295 YGLKIMP 301
+++ P
Sbjct: 713 KLMRLDP 719
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 128/337 (37%), Gaps = 74/337 (21%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR 78
KQ+H L G L++IYA D+ A +F ++P+ NV ++ ++ +
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
+ + +E MR G P+ VL AC
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACF-------------------------- 361
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
+ GDVE R+F + + V +WN+M+S Y + A+ M+
Sbjct: 362 ----------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQN 411
Query: 199 CEPDVVTRNTVMDAYCRM--------------------------GLV---SEASK----- 224
+PD T + ++ + R+ GL+ SE K
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISE 471
Query: 225 -VFEQ-IKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC 282
+F+ I + ++ W ++ISG+ +L +FR M ++ P+ + + VL SC
Sbjct: 472 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Query: 283 LGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L +L G++ H GL + G + AL +Y +
Sbjct: 532 LCSLLHGRQFH--GLVVKSGYVSDSFVETALTDMYCK 566
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 162/351 (46%), Gaps = 43/351 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L ACS S++ +Q+H ++ G H P+ T L+ +Y+ C + A ++F + +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+ +++A ++ + ++ + MR K V PD + V+ C+ L L
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVL-GLYNYGKSVHA 397
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
+ +++L +YSKCG A VF M E+D+ +W S++S NG +
Sbjct: 398 ELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKE 457
Query: 187 AVEVLESMR--VDGCEPD-----------------------------------VVTRNTV 209
A++V M+ D +PD V +++
Sbjct: 458 ALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSL 517
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + GL A KVF + N+++W ++IS YS +S+ +F M++ G +FPD
Sbjct: 518 IDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG-IFPD 576
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
+ +++ VLV+ +L GK +HGY L++ +P + ++ AL+ +Y +
Sbjct: 577 SVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKN---ALIDMYVK 624
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 144/327 (44%), Gaps = 39/327 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L++++ CS N K +H + + L+ +Y+ C A+ +F+ +
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME 435
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFK--GVSPDGYVFPKVLKACAQLAALLEX 120
+ ++ A+ S+++ ++G ++ ++ + +M+ + PD + V ACA L AL
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEAL-RF 494
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
++ V +S++D+YSKCG E A +VF M ++ +WNSM+SCY
Sbjct: 495 GLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSR 554
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVT----------------------------------- 205
N L + ++++ M G PD V+
Sbjct: 555 NNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHL 614
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+N ++D Y + G A +F++++ ++I+W +I GY S G +L +F EM G
Sbjct: 615 KNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE 674
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEI 292
PD ++ +C G + GK I
Sbjct: 675 S-PDDVTFLSLISACNHSGFVEEGKNI 700
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 9/255 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ S+ AC+ ++L Q+H M+ G F + LI +Y+ C A +F +
Sbjct: 479 MTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS 538
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
N+ A+ S+++ +SR+ L I+ + M +G+ PD VL A + A+LL+
Sbjct: 539 TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS 598
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D + N+++DMY KCG + A +F +M+ + + +WN M+ Y +G
Sbjct: 599 LHGYTLRLGIPS-DTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHG 657
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISW 237
A+ + + M+ G PD VT +++ A G V E +FE +K +PN+ +
Sbjct: 658 DCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHY 717
Query: 238 TTLISGYSSVGRHGV 252
++ +GR G+
Sbjct: 718 ANMV---DLLGRAGL 729
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 149/367 (40%), Gaps = 63/367 (17%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+ACSA +L+ K +H +++ G PF T L+ +Y C L A +F Q
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 124
Query: 65 -------NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA-CAQLAA 116
+V + S++ + + ++ + + M GV PD + V+ C +
Sbjct: 125 QSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNF 184
Query: 117 LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMM 175
E D + +++DMY K G A RVF E+ ++ +V WN M+
Sbjct: 185 RREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
Query: 176 SCYVCNGLSQRAVEV----------LESMRVDGC-------------------------- 199
+ +G+ + ++++ L S G
Sbjct: 245 VGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 200 -EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
+P V T +++ Y + G+V EA VF + D + W +++ Y+ +L +F
Sbjct: 305 NDPYVCT--SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYR------SAGAA 312
M V PD+ LS V+ C LG GK +H E+F R + +A
Sbjct: 363 FMRQKS-VLPDSFTLSNVISCCSVLGLYNYGKSVH--------AELFKRPIQSTSTIESA 413
Query: 313 LLTLYAR 319
LLTLY++
Sbjct: 414 LLTLYSK 420
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 91/237 (38%), Gaps = 47/237 (19%)
Query: 102 YVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD 161
+ FP +LKAC+ L L D + S+++MY KCG ++ A +VFD
Sbjct: 61 FTFPSLLKACSALTN-LSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD 119
Query: 162 EMRE-------RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT--------- 205
+ RDV WNSM+ Y + V M V G PD +
Sbjct: 120 GWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 206 ----------------------------RNTVMDAYCRMGLVSEASKVFEQIKDP-NVIS 236
+ ++D Y + GL +A +VF +I+D NV+
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
W +I G+ G SL ++ N+ + + +G L +C G++IH
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST-SFTGALGACSQSENSGFGRQIH 295
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 43/355 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L+ C++ L + +Q+H + + G L+ +YA C + A LF +
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 63 -QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ N +TS+L +S++G A + IE + ++R +G + Y FP VL ACA ++A
Sbjct: 188 GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC-RVG 246
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
++ V ++++DMY+KC ++E A + + M DV SWNSM+ V
Sbjct: 247 VQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQ 306
Query: 182 GLSQRAVEVL-----ESMRVD-------------------------------GCEPDVVT 205
GL A+ + M++D G +
Sbjct: 307 GLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLV 366
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
N ++D Y + G++ A KVFE + + +VISWT L++G + G + +L +F M G+
Sbjct: 367 NNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGI 426
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
PD + VL + L L G+++HG +K P + S +L+T+Y +
Sbjct: 427 T-PDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSL---SVNNSLVTMYTK 477
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 148/355 (41%), Gaps = 43/355 (12%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
+H N LL S S +++A+Q+ M R F +I Y++ L A LFR
Sbjct: 29 LHSNLLLGDLSKSGRVDEARQMFDKM----PERDEFTWNTMIVAYSNSRRLSDAEKLFRS 84
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
P N ++ ++++ + + G + + EM+ G+ P+ Y VL+ C L LL
Sbjct: 85 NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLR- 143
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYV 179
D+ V N +L MY++C + A +F+ M E++ +W SM++ Y
Sbjct: 144 GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYS 203
Query: 180 CNGLSQRAVEVLESMRVDGCE------PDVVT---------------------------- 205
NG + +A+E +R +G + P V+T
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY 263
Query: 206 -RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
++ ++D Y + + A + E ++ +V+SW ++I G G G +L +F M
Sbjct: 264 VQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD 323
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
M D S +++C L + L + G Y+ AL+ +YA+
Sbjct: 324 MKIDDFTIPS--ILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAK 376
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 35/279 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L AC++ + Q+H ++ G + + LI +YA C ++ SA +L +
Sbjct: 232 SVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVD 291
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++ S++ R GL + + + M + + D + P +L A ++
Sbjct: 292 DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSA 351
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
V N+++DMY+K G ++ A +VF+ M E+DV SW ++++ NG
Sbjct: 352 HCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSY 411
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDA-------------------------------- 212
A+++ +MRV G PD + +V+ A
Sbjct: 412 DEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSL 471
Query: 213 ---YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG 248
Y + G + +A+ +F ++ ++I+WT LI GY+ G
Sbjct: 472 VTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG 510
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 4/242 (1%)
Query: 5 SLLQACSASKS-LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
S+L + S++ + A H ++ G L+ +YA + SA +F + +
Sbjct: 333 SILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE 392
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+V ++T+++ ++ +G + ++ + MR G++PD V VL A A+L LLE
Sbjct: 393 KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELT-LLEFGQQ 451
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
L V NS++ MY+KCG +E A +F+ M RD+ +W ++ Y NGL
Sbjct: 452 VHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGL 511
Query: 184 SQRAVEVLESMR-VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-DPNVISWTTLI 241
+ A +SMR V G P ++D + R G + ++ Q++ +P+ W ++
Sbjct: 512 LEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAIL 571
Query: 242 SG 243
+
Sbjct: 572 AA 573
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 150/325 (46%), Gaps = 33/325 (10%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
++++ + SL + K++H ++ G + LI +Y A +F ++P+ +
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ S+++ + G + + EM G PD + L AC+ + +
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D+ V S+LDMYSK G+V A R+F+ M +R++ +WN M+ CY NG
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 186 RAVEVLESM-RVDGCEPDVVT-------------------------------RNTVMDAY 213
A + M +G +PDV+T ++D Y
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 214 CRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
G + A +F+++ + NVISW ++I+ Y G++ +L +F+E+ + +V PD+ +
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV-PDSTTI 434
Query: 274 SGVLVSCRCLGALASGKEIHGYGLK 298
+ +L + +L+ G+EIH Y +K
Sbjct: 435 ASILPAYAESLSLSEGREIHAYIVK 459
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 136/298 (45%), Gaps = 45/298 (15%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T+ ++ +AD + A LF ++ + + F + ++ + GL + ++ Y+ M F GV
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
D + +P V+K+ A +++L E D+ VCNS++ +Y K G A +
Sbjct: 128 ADTFTYPFVIKSVAGISSL-EEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP----------------- 201
VF+EM ERD+ SWNSM+S Y+ G ++ + + M G +P
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 202 -------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
DV+ +++D Y + G VS A ++F + N+++W +I
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 306
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL--GALASGKEIHGYGLK 298
Y+ GR + F++M + PD V+ S L A+ G+ IHGY ++
Sbjct: 307 CYARNGRVTDAFLCFQKMSEQNGLQPD------VITSINLLPASAILEGRTIHGYAMR 358
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 6/248 (2%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
+ + +H Y + G T LI +Y +C L+SA +F ++ + NV ++ SI+A +
Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
++G +E + E+ + PD +L A A+ +L E +
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467
Query: 138 RVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
+ NS++ MY+ CGD+E A + F+ + +DV SWNS++ Y +G + +V + M
Sbjct: 468 -ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS 526
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGV 252
P+ T +++ A G+V E + FE +K DP + + ++ G
Sbjct: 527 RVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSA 586
Query: 253 SLGIFREM 260
+ EM
Sbjct: 587 AKRFLEEM 594
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 135/324 (41%), Gaps = 43/324 (13%)
Query: 5 SLLQACSASKSLNQAKQLH-HYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
S L ACS S K++H H + T ++ +Y+ ++ A +F + Q
Sbjct: 236 SALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ 295
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQLAALLEXXX 122
N+ A+ ++ ++R+G + +M + G+ PD +L A A L
Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEG-----R 350
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ + +++DMY +CG ++ A +FD M E++V SWNS+++ YV NG
Sbjct: 351 TIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNG 410
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRM-------------------------- 216
+ A+E+ + + PD T +++ AY
Sbjct: 411 KNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILN 470
Query: 217 ---------GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
G + +A K F I +V+SW ++I Y+ G +S+ +F EM+ V
Sbjct: 471 SLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI-ASRVN 529
Query: 268 PDAGALSGVLVSCRCLGALASGKE 291
P+ + +L +C G + G E
Sbjct: 530 PNKSTFASLLAACSISGMVDEGWE 553
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L A + S SL++ +++H Y++ L+ +YA C DL A F +
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++ SI+ ++ HG R + ++EM V+P+ F +L AC+ + E
Sbjct: 496 DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYF 555
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ +LD+ + G+ A R +EM
Sbjct: 556 ESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 153/345 (44%), Gaps = 40/345 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ LLQACS L Q KQ+H +++++ + +++ +YA C +F +L
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 63 --QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ ++ + SI++ R+GL Q + Y +M GVSPD FP ++KAC L
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ V +S++ Y + G ++ +++FD + ++D WN M++ Y
Sbjct: 158 DFLSDTVSSLGMDCNEF-VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVT----------------------------------- 205
G ++ MR+D P+ VT
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+N+++ Y + G +ASK+F + + ++W +ISGY G SL F EM++ G
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG- 335
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLK-IMPGEIFYRSA 309
V PDA S +L S L K+IH Y ++ + +IF SA
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 42/325 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+SLL + S ++L KQ+H Y++ H F T+ LI Y C + A ++F Q
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V FT++++ + +GL +E + + +SP+ +L L AL
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL---KL 459
Query: 123 XXXXXXXXXXXXXDLRVCN---SVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D R CN +V+DMY+KCG + A +F+ + +RD+ SWNSM++
Sbjct: 460 GRELHGFIIKKGFDNR-CNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 518
Query: 180 CNGLSQRAVEVLESMRVDGC-----------------------------------EPDVV 204
+ A+++ M V G DV
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 578
Query: 205 TRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
+ +T++D Y + G + A VF+ +K+ N++SW ++I+ + G+ SL +F EMV
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 638
Query: 265 MVFPDAGALSGVLVSCRCLGALASG 289
+ PD ++ SC +G + G
Sbjct: 639 GIRPDQITFLEIISSCCHVGDVDEG 663
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 151/349 (43%), Gaps = 39/349 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L++AC A K+ L + G F + LI+ Y + + LF ++ Q +
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ +L +++ G I+ ++ MR +SP+ F VL CA L++
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCAS-KLLIDLGVQLH 262
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ + NS+L MYSKCG + A+++F M D +WN M+S YV +GL +
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME 322
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVM----------------------------------- 210
++ M G PD +T ++++
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
DAY + VS A +F Q +V+ +T +ISGY G + SL +FR +V + P+
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNE 441
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L +L L AL G+E+HG+ +K G + G A++ +YA+
Sbjct: 442 ITLVSILPVIGILLALKLGRELHGFIIK--KGFDNRCNIGCAVIDMYAK 488
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 127/285 (44%), Gaps = 11/285 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L +L ++LH +++ G + +I +YA C + A+ +F +L
Sbjct: 444 LVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS 503
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ ++ S++ ++ I+ + +M G+ D L ACA L +
Sbjct: 504 KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE-SFGK 562
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ ++++DMY+KCG+++ A VF M+E+++ SWNS+++ +G
Sbjct: 563 AIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHG 622
Query: 183 LSQRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVIS 236
+ ++ + M G PD +T ++ + C +G V E + F + + P
Sbjct: 623 KLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEH 682
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ ++ + GR L E V PDAG +L +CR
Sbjct: 683 YACVVDLFGRAGR----LTEAYETVKSMPFPPDAGVWGTLLGACR 723
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 156/350 (44%), Gaps = 41/350 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL+ C L K++H ++ G F T L +YA C + A +F ++P+ +
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ +I+A +S++G+AR +E M + + P VL A + L L+
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR-LISVGKEIH 259
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ + +++DMY+KCG +E A ++FD M ER+V SWNSM+ YV N +
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 186 RAVEVLESMRVDGCEP-----------------------------------DVVTRNTVM 210
A+ + + M +G +P +V N+++
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI 379
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
YC+ V A+ +F +++ ++SW +I G++ GR +L F +M V PD
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM-RSRTVKPDT 438
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLK-IMPGEIFYRSAGAALLTLYAR 319
V+ + L K IHG ++ + +F + AL+ +YA+
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT---ALVDMYAK 485
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 153/330 (46%), Gaps = 42/330 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL-PQP 64
LL+ CS SL + +Q+ + +G +++ FF TKL+ ++ + A +F + +
Sbjct: 43 LLERCS---SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV T + F L + ++ + MR+ V P Y F +LK C A L
Sbjct: 100 NVLYHTMLKGFAKVSDLDK-ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAEL-RVGKEI 157
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL + +MY+KC V A +VFD M ERD+ SWN++++ Y NG++
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVM---------------------------------- 210
+ A+E+++SM + +P +T +V+
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 211 -DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
D Y + G + A ++F+ + + NV+SW ++I Y ++ IF++M+++G V P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG-VKPT 336
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKI 299
++ G L +C LG L G+ IH +++
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVEL 366
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 37/320 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L A SA + ++ K++H Y + G +T L+ +YA C L +A LF + +
Sbjct: 241 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 300
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++ S++ + ++ ++ + + +M +GV P L ACA L LE
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD-LERGRFI 359
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
++ V NS++ MY KC +V+ AA +F +++ R + SWN+M+ + NG
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVM---------------------------------- 210
A+ MR +PD T +V+
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479
Query: 211 -DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
D Y + G + A +F+ + + +V +W +I GY + G +L +F EM G + P+
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM-QKGTIKPN 538
Query: 270 AGALSGVLVSCRCLGALASG 289
V+ +C G + +G
Sbjct: 539 GVTFLSVISACSHSGLVEAG 558
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 1/225 (0%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L AC+ L + + +H + G R LI +Y C ++ +A S+F +L +
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++ +++ +++G + +++MR + V PD + + V+ A A+L+ +
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS-ITHHAKWIHG 462
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
++ V +++DMY+KCG + A +FD M ER V +WN+M+ Y +G +
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 522
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
A+E+ E M+ +P+ VT +V+ A GLV K F +K+
Sbjct: 523 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE 567
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 7/183 (3%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDV--FSWNSMMSCYVCNGLSQRAV--EVLESMRV 196
+++L ++K D++ A + F MR DV +N VC ++ V E+ +
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 197 DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGI 256
G D+ + + Y + V+EA KVF+++ + +++SW T+++GYS G ++L +
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 257 FREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTL 316
+ M + + P + VL + L ++ GKEIHGY ++ G + AL+ +
Sbjct: 224 VKSMCEENLK-PSFITIVSVLPAVSALRLISVGKEIHGYAMR--SGFDSLVNISTALVDM 280
Query: 317 YAR 319
YA+
Sbjct: 281 YAK 283
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 159/351 (45%), Gaps = 50/351 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYAD--------------- 47
+N L+QAC+ + Q+H + G P T LI +YA+
Sbjct: 111 VNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIP 170
Query: 48 ----------------CDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
C D+ A LF +P+ + A+ ++++ +++ G +R+ + +
Sbjct: 171 CPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHL 230
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M+ +GV +G VL AC QL AL + +R+ +++D+Y+KCG
Sbjct: 231 MQLEGVKVNGVAMISVLSACTQLGAL-DQGRWAHSYIERNKIKITVRLATTLVDLYAKCG 289
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
D+E A VF M E++V++W+S ++ NG ++ +E+ M+ DG P+ VT +V+
Sbjct: 290 DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR 349
Query: 212 AYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+G V E + F+ ++ +P + + L+ Y+ GR ++ I ++M +
Sbjct: 350 GCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMP----M 405
Query: 267 FPDAGALSGVLVSCRC-----LGALASGK----EIHGYGLKIMPGEIFYRS 308
P A S +L + R LG LAS K E +G ++ I+ S
Sbjct: 406 KPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADS 456
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 162/367 (44%), Gaps = 54/367 (14%)
Query: 3 LNSLLQACS---ASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFR 59
L S++ ACS + L KQ+H Y L G F L+ +Y L S+ L
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLG 260
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
++ + ++L+ ++ + +E EM +GV PD + VL AC+ L L
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
+ V ++++DMY C V RVFD M +R + WN+M++ Y
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 180 CN-----------GLSQRAVEVLESMRVDGCEP-------------------------DV 203
N G+ + A + S + G P D
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM--- 260
+NT+MD Y R+G + A ++F +++D ++++W T+I+GY H +L + +M
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 261 ---VNDGM----VFPDAGALSGVLVSCRCLGALASGKEIHGYGLK-IMPGEIFYRSAGAA 312
V+ G + P++ L +L SC L ALA GKEIH Y +K + ++ + G+A
Sbjct: 501 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV---AVGSA 557
Query: 313 LLTLYAR 319
L+ +YA+
Sbjct: 558 LVDMYAK 564
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 125/287 (43%), Gaps = 41/287 (14%)
Query: 69 FTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXX 128
+ +L R L R+ + TY +M G+ PD Y FP +LKA A L +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 129 XXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAV 188
+ V N+++++Y KCGD +VFD + ER+ SWNS++S + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 189 EVLESMRVDGCEP------DVVTR-------------------------------NTVMD 211
E M + EP VVT NT++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y ++G ++ + + ++++W T++S + +L REMV +G V PD
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEF 303
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRS-AGAALLTLY 317
+S VL +C L L +GKE+H Y LK G + S G+AL+ +Y
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALK--NGSLDENSFVGSALVDMY 348
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 139/304 (45%), Gaps = 26/304 (8%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
++ AC S + ++ + +H +++ G R F L+ +Y+ + A +F ++ +
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 470
Query: 66 VFAFTS--------------ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC 111
+ + + +L H L R+ + + + K P+ +L +C
Sbjct: 471 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK---PNSITLMTILPSC 527
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSW 171
A L+AL + D+ V ++++DMY+KCG ++ + +VFD++ +++V +W
Sbjct: 528 AALSALAKGKEIHAYAIKNNLAT-DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITW 586
Query: 172 NSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK- 230
N ++ Y +G Q A+++L M V G +P+ VT +V A G+V E ++F +K
Sbjct: 587 NVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP 646
Query: 231 ----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
+P+ + ++ GR + + M D F AGA S +L + R L
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD---FNKAGAWSSLLGASRIHNNL 703
Query: 287 ASGK 290
G+
Sbjct: 704 EIGE 707
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 108/237 (45%), Gaps = 9/237 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++L +C+A +L + K++H Y + + + L+ +YA C L+ + +F Q+P
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
Q NV + I+ + HG ++ I+ M +GV P+ F V AC+ + E
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD---VFSWNSMM-SCY 178
V+D+ + G ++ A ++ + M RD +W+S++ +
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSLLGASR 698
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNV 234
+ N L + + + + EP+V + ++ + Y GL +A++V +K+ V
Sbjct: 699 IHNNLE---IGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 150/329 (45%), Gaps = 50/329 (15%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
++ACS+ + KQ H + G F ++ LI +Y+ C L A +F ++P+ N+
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVF------PKVLKACAQLAA--LL 118
++TS++ + +G A + + ++ D +F V+ AC+++ A L
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD--VEGAARVFDEMRERDVFSWNSMMS 176
E + V N++LD Y+K G+ V A ++FD++ ++D S+NS+MS
Sbjct: 203 ESIHSFVIKRGFDRG---VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMS 259
Query: 177 CYVCNGLSQRAVEVLE--------------------------SMRVDGC----------E 200
Y +G+S A EV ++R+ C E
Sbjct: 260 VYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLE 319
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
DV+ +++D YC+ G V A K F+++K+ NV SWT +I+GY G +L +F M
Sbjct: 320 DDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASG 289
++ G V P+ VL +C G G
Sbjct: 380 IDSG-VRPNYITFVSVLAACSHAGLHVEG 407
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 45/282 (15%)
Query: 56 SLF-RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL 114
+LF R + + +VF++ S++A +R G + + + ++ MR + P FP +KAC+ L
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
+ D+ V ++++ MYS CG +E A +VFDE+ +R++ SW SM
Sbjct: 90 FDIFSGKQTHQQAFVFGYQS-DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPD-------------------------------- 202
+ Y NG + AV + + + VD + D
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 203 VVTR---------NTVMDAYCRMGL--VSEASKVFEQIKDPNVISWTTLISGYSSVGRHG 251
V+ R NT++DAY + G V+ A K+F+QI D + +S+ +++S Y+ G
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 252 VSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
+ +FR +V + +V +A LS VL++ GAL GK IH
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH 310
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 136/289 (47%), Gaps = 13/289 (4%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDD--LRSAHSLF 58
M L S++ ACS + + +H +++ G R L+ YA + + A +F
Sbjct: 184 MGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 59 RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAAL 117
Q+ + ++ SI++ +++ G++ + E + + + K V+ + VL A + AL
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
D+ V S++DMY KCG VE A + FD M+ ++V SW +M++
Sbjct: 304 -RIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DP 232
Y +G + +A+E+ +M G P+ +T +V+ A GL E + F +K +P
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEP 422
Query: 233 NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ + ++ +GR G + +++ + PD+ S +L +CR
Sbjct: 423 GLEHYGCMV---DLLGRAGFLQKAY-DLIQRMKMKPDSIIWSSLLAACR 467
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 162/384 (42%), Gaps = 74/384 (19%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQ---IYADCDDLRSAHSLFRQL 61
SLL C K+L + +H M+ G H + +KLI+ + + L A S+F+ +
Sbjct: 38 SLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+PN+ + ++ H+ ++ Y M G+ P+ Y FP VLK+CA+ A E
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE-G 153
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD----------------------------- 152
DL V S++ MY + G
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 153 --VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTR---- 206
+E A ++FDE+ +DV SWN+M+S Y G + A+E+ + M PD T
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 207 -------------------------------NTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
N ++D Y + G + A +FE++ +VI
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
SW TLI GY+ + + +L +F+EM+ G D LS +L +C LGA+ G+ IH Y
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS-ILPACAHLGAIDIGRWIHVY 392
Query: 296 GLKIMPGEIFYRSAGAALLTLYAR 319
K + G S +L+ +YA+
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAK 416
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 154/355 (43%), Gaps = 70/355 (19%)
Query: 6 LLQACSASKSLNQAKQLHHYML---------LHGS----------------------HRK 34
+L++C+ SK+ + +Q+H ++L +H S HR
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 35 PFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
T LI+ YA + +A LF ++P +V ++ ++++ ++ G ++ +E + +M
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
V PD V+ ACAQ + +E +L++ N+++D+YSKCG++E
Sbjct: 260 TNVRPDESTMVTVVSACAQ-SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 318
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT--------- 205
A +F+ + +DV SWN+++ Y L + A+ + + M G P+ VT
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 206 ----------------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISW 237
R +++D Y + G + A +VF I ++ SW
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+I G++ GR S +F M G + PD G+L +C G L G+ I
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIG-IQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 144/307 (46%), Gaps = 18/307 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+++ AC+ S S+ +Q+H ++ HG LI +Y+ C +L +A LF +LP
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK 330
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL---LEXX 121
+V ++ +++ ++ L ++ + + EM G +P+ +L ACA L A+
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
LR S++DMY+KCGD+E A +VF+ + + + SWN+M+ + +
Sbjct: 391 VYIDKRLKGVTNASSLRT--SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVIS 236
G + + ++ MR G +PD +T ++ A G++ +F + P +
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEH 508
Query: 237 WTTLIS--GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
+ +I G+S + + + EM DG+++ +L +C+ G + G+
Sbjct: 509 YGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIW------CSLLKACKMHGNVELGESFAE 562
Query: 295 YGLKIMP 301
+KI P
Sbjct: 563 NLIKIEP 569
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 152/340 (44%), Gaps = 47/340 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHR---KPFFTTKLIQIYADCDDLRSAHSLFR 59
L LLQA K + +++H L+ GS R T++I +YA C + +F
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD 144
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALL 118
L N+F + ++++ +SR+ L + +ET+ EM + PD + +P V+KACA ++ +
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSD-V 203
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
D+ V N+++ Y G V A ++FD M ER++ SWNSM+ +
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 179 VCNGLSQRAVEVLESMRVDGCE----PDVVT----------------------------- 205
NG S+ + +L M + + PDV T
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 323
Query: 206 ------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
N +MD Y + G ++ A +F+ + NV+SW T++ G+S+ G + + R+
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 260 MVNDGM-VFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
M+ G V D + + C L S KE+H Y LK
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 423
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 145/302 (48%), Gaps = 9/302 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL ACS KSL K++H +++ + R F ++ +Y C +L + +LF +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++ +++ + ++G + + + +M G+ G V AC+ L +L
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL-RLGREA 619
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D + S++DMY+K G + +++VF+ ++E+ SWN+M+ Y +GL+
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTT 239
+ A+++ E M+ G PD +T V+ A GL+ E + +Q+K PN+ +
Sbjct: 680 KEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYAC 739
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+I G+ +L + E +++ D G +L SCR L G+++ ++
Sbjct: 740 VIDMLGRAGQLDKALRVVAEEMSEE---ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFEL 796
Query: 300 MP 301
P
Sbjct: 797 EP 798
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 37/315 (11%)
Query: 10 CSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAF 69
C L K+LH Y L + YA C L A +F + V ++
Sbjct: 405 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW 464
Query: 70 TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXX 129
+++ H++ R ++ + +M+ G+ PD + +L AC++L + L
Sbjct: 465 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS-LRLGKEVHGFII 523
Query: 130 XXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVE 189
DL V SVL +Y CG++ +FD M ++ + SWN++++ Y+ NG RA+
Sbjct: 524 RNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALG 583
Query: 190 VLESMRVDGC-----------------------------------EPDVVTRNTVMDAYC 214
V M + G E D +++D Y
Sbjct: 584 VFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYA 643
Query: 215 RMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
+ G ++++SKVF +K+ + SW +I GY G ++ +F EM G PD
Sbjct: 644 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN-PDDLTFL 702
Query: 275 GVLVSCRCLGALASG 289
GVL +C G + G
Sbjct: 703 GVLTACNHSGLIHEG 717
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 147/355 (41%), Gaps = 43/355 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++L C+ + + K +H + + ++ L+ +Y+ C + +A +F+
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNN 354
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG--VSPDGYVFPKVLKACAQLAALLEX 120
NV ++ +++ S G + +M G V D + C + L
Sbjct: 355 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+L V N+ + Y+KCG + A RVF +R + V SWN+++ +
Sbjct: 415 KELHCYSLKQEFVYNEL-VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVT-------------------------RN-------- 207
+ + +++ M++ G PD T RN
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 208 --TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+V+ Y G + +F+ ++D +++SW T+I+GY G +LG+FR+MV G+
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLK-IMPGEIFYRSAGAALLTLYAR 319
+ V +C L +L G+E H Y LK ++ + F +L+ +YA+
Sbjct: 594 QLCGISMMP-VFGACSLLPSLRLGREAHAYALKHLLEDDAF---IACSLIDMYAK 644
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 43/221 (19%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM--RV 196
+C ++ MY+ CG + + VFD +R +++F WN+++S Y N L +E M
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 197 D----------------------------------GCEPDVVTRNTVMDAYCRMGLVSEA 222
D G DV N ++ Y G V++A
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 223 SKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVN---DGMVFPDAGALSGVLVS 279
++F+ + + N++SW ++I +S G S + EM+ DG PD L VL
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 280 CRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
C + GK +HG+ +K+ + E+ + AL+ +Y++
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNN---ALMDMYSK 339
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 145/326 (44%), Gaps = 41/326 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGS-HRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LQ C+ K +Q+H +M+ G P T L+ +YA C +R A +F + +
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERD 125
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
VF + ++++ +G +ETY EMR G+ PD Y FP +LK + L
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME--LSDVKKVH 183
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNGLS 184
D V + ++ YSK VE A +VFDE+ +R D WN++++ Y
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 185 QRAVEVLESMRVDGC-----------------------------------EPDVVTRNTV 209
+ A+ V MR +G D+V N +
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + + EA+ +FE + + ++ +W +++ + G H +L +F M+ G + PD
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG-IRPD 362
Query: 270 AGALSGVLVSCRCLGALASGKEIHGY 295
L+ VL +C L +L G+EIHGY
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGY 388
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 132/305 (43%), Gaps = 20/305 (6%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ S+L A + S ++ + +H + GS + LI +Y L A+S+F +
Sbjct: 265 ITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD 324
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL---E 119
+ ++F + S+L H G + + M G+ PD VL C +LA+L E
Sbjct: 325 ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGRE 384
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
+ + NS++DMY KCGD+ A VFD MR +D SWN M++ Y
Sbjct: 385 IHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYG 444
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNV 234
+ A+++ M G +PD +T ++ A G ++E Q++ P
Sbjct: 445 VQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTS 504
Query: 235 ISWTTLIS--GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG----ALAS 288
+ +I G + L I + + ++ +V+ +L SCR G AL +
Sbjct: 505 DHYACVIDMLGRADKLEEAYELAISKPICDNPVVW------RSILSSCRLHGNKDLALVA 558
Query: 289 GKEIH 293
GK +H
Sbjct: 559 GKRLH 563
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 138 RVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
R S+++MY+KCG + A VF ERDVF +N+++S +V NG A+E MR +
Sbjct: 97 RAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRAN 155
Query: 198 GCEPDVVTRNTVM-------------------------DAYCRMGLVS---------EAS 223
G PD T +++ D Y GLV+ +A
Sbjct: 156 GILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQ 215
Query: 224 KVFEQIKD-PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC 282
KVF+++ D + + W L++GYS + R +L +F +M +G V ++ VL +
Sbjct: 216 KVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG-VGVSRHTITSVLSAFTV 274
Query: 283 LGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G + +G+ IHG +K G S AL+ +Y +
Sbjct: 275 SGDIDNGRSIHGLAVKTGSGSDIVVS--NALIDMYGK 309
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 37/319 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC+ + S LH ++ G + T L+ IY+ L AH LF ++P +
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V +T++ + ++ G R+ I+ + +M GV PD Y +VL AC + L+
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGD-LDSGEWIV 235
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ V +++++Y+KCG +E A VFD M E+D+ +W++M+ Y N +
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 186 RAVEVLESMRVDGCEPD-------------------------VVTR----------NTVM 210
+E+ M + +PD ++ R N ++
Sbjct: 296 EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALI 355
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G ++ +VF+++K+ +++ ISG + G +S +F + G + PD
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG-ISPDG 414
Query: 271 GALSGVLVSCRCLGALASG 289
G+L C G + G
Sbjct: 415 STFLGLLCGCVHAGLIQDG 433
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 157/346 (45%), Gaps = 43/346 (12%)
Query: 11 SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFT 70
S + ++N KQ+H ++ H H F L++ + ++ LF PN+F +
Sbjct: 21 SVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYN 80
Query: 71 SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
S++ + L + ++ + +R G+ G+ FP VLKAC + A+ +
Sbjct: 81 SLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR-ASSRKLGIDLHSLVVK 139
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV 190
D+ S+L +YS G + A ++FDE+ +R V +W ++ S Y +G + A+++
Sbjct: 140 CGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDL 199
Query: 191 LESMRVDGCEPD-----------------------------------VVTRNTVMDAYCR 215
+ M G +PD R T+++ Y +
Sbjct: 200 FKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAK 259
Query: 216 MGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
G + +A VF+ + + ++++W+T+I GY+S + +F +M+ + + PD ++ G
Sbjct: 260 CGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK-PDQFSIVG 318
Query: 276 VLVSCRCLGALASGKEIHGYGLKIMPGEIFYRS--AGAALLTLYAR 319
L SC LGAL G+ +G+ ++ F + AL+ +YA+
Sbjct: 319 FLSSCASLGALDLGE----WGISLIDRHEFLTNLFMANALIDMYAK 360
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 4/278 (1%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L AC L+ + + YM + F T L+ +YA C + A S+F + + +
Sbjct: 218 VLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKD 277
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ +++++ ++ + ++ IE + +M + + PD + L +CA L AL +
Sbjct: 278 IVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL-DLGEWGI 336
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+L + N+++DMY+KCG + VF EM+E+D+ N+ +S NG +
Sbjct: 337 SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVK 396
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISG-- 243
+ V G PD T ++ GL+ + + F I + T G
Sbjct: 397 LSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCM 456
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
GR G+ +R ++ D + P+A +L CR
Sbjct: 457 VDLWGRAGMLDDAYR-LICDMPMRPNAIVWGALLSGCR 493
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 143/295 (48%), Gaps = 11/295 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLI--QIYADCDDLRSAHSLFRQLPQ 63
L Q C K++ KQ+H M+++G +LI + L+ AH LF ++P+
Sbjct: 18 LWQNC---KNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPK 74
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
P+V +L ++ + + Y EM +GVSPD Y F VLKAC++L
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ V N+++ ++ CGD+ A+ +FD+ + +W+SM S Y G
Sbjct: 135 HGKVVRHGFVLNEY-VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGK 193
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISG 243
A+ + + M D V N ++ + + A ++F++ + +V++W +ISG
Sbjct: 194 IDEAMRLFDEMPY----KDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISG 249
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
Y + G +LGIF+EM + G PD + +L +C LG L +GK +H Y L+
Sbjct: 250 YVNCGYPKEALGIFKEMRDAGE-HPDVVTILSLLSACAVLGDLETGKRLHIYILE 303
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 131/326 (40%), Gaps = 82/326 (25%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ACS + + H ++ HG + LI +A+C DL A LF + +
Sbjct: 118 VLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAH 177
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
A++S+ + +++ G + + + EM +K D + ++ C
Sbjct: 178 KVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCL------------- 220
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
KC +++ A +FD E+DV +WN+M+S YV G +
Sbjct: 221 -----------------------KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 186 RAVEVLESMRVDGCEPDVVT---------------------------------------- 205
A+ + + MR G PDVVT
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
N ++D Y + G + A +VF +KD ++ +W TLI G + G S+ +F EM
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG-SIEMFEEM-QRLK 375
Query: 266 VFPDAGALSGVLVSCRCLGALASGKE 291
V+P+ GV+++C G + G++
Sbjct: 376 VWPNEVTFIGVILACSHSGRVDEGRK 401
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 14/252 (5%)
Query: 48 CDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKV 107
C ++ SA LF + + +V + ++++ + G ++ + + EMR G PD +
Sbjct: 222 CKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSL 281
Query: 108 LKACAQLAALLEXXXXXXXXXXXXXXXXDLRV----CNSVLDMYSKCGDVEGAARVFDEM 163
L ACA L L + V N+++DMY+KCG ++ A VF +
Sbjct: 282 LSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV 341
Query: 164 RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEAS 223
++RD+ +WN+++ + ++ ++E+ E M+ P+ VT V+ A G V E
Sbjct: 342 KDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR 400
Query: 224 KVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLV 278
K F ++D PN+ + ++ +GR G F V + P+A +L
Sbjct: 401 KYFSLMRDMYNIEPNIKHYGCMV---DMLGRAGQLEEAFM-FVESMKIEPNAIVWRTLLG 456
Query: 279 SCRCLGALASGK 290
+C+ G + GK
Sbjct: 457 ACKIYGNVELGK 468
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 19/246 (7%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFT-----TKLIQIYADCDDLRSAHSLFR 59
SLL AC+ L K+LH Y+L S + LI +YA C + A +FR
Sbjct: 280 SLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFR 339
Query: 60 QLPQPNVFAFTSI---LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAA 116
+ ++ + ++ LA H G IE + EM+ V P+ F V+ AC+
Sbjct: 340 GVKDRDLSTWNTLIVGLALHHAEG----SIEMFEEMQRLKVWPNEVTFIGVILACSHSGR 395
Query: 117 LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMM 175
+ E +++ ++DM + G +E A + M+ E + W +++
Sbjct: 396 VDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLL 455
Query: 176 -SCYVCNG--LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFE--QIK 230
+C + L + A E L SMR D D V + + + + V + K+F+ ++K
Sbjct: 456 GACKIYGNVELGKYANEKLLSMRKDES-GDYVLLSNIYASTGQWDGVQKVRKMFDDTRVK 514
Query: 231 DPNVIS 236
P +S
Sbjct: 515 KPTGVS 520
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 150/337 (44%), Gaps = 48/337 (14%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP-- 62
+LL S +K+LN +Q+H +++HG + + L Y + L A S F ++P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 63 QPNVFAFTSILAFHSRHGLARQC-----IETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
+ N ++ +IL+ +S+ ++ C + Y MR D + +KAC L L
Sbjct: 69 KRNRHSWNTILSGYSK---SKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGL-GL 124
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
LE D V S+++MY++ G +E A +VFDE+ R+ W +M
Sbjct: 125 LENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKG 184
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVT-------------------------------- 205
Y+ + MR G D +T
Sbjct: 185 YLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ 244
Query: 206 ----RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
+ +++D Y + L+ A K+FE D NV+ WTTLISG++ R + +FR+M+
Sbjct: 245 SDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+ + P+ L+ +LVSC LG+L GK +HGY ++
Sbjct: 305 RES-ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIR 340
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 4/268 (1%)
Query: 36 FFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK 95
+ +I +Y C L +A LF NV +T++++ ++ A + + + +M +
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 96 GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEG 155
+ P+ +L +C+ L +L D S +DMY++CG+++
Sbjct: 307 SILPNQCTLAAILVSCSSLGSL-RHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQM 365
Query: 156 AARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCR 215
A VFD M ER+V SW+SM++ + NGL + A++ M+ P+ VT +++ A
Sbjct: 366 ARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSH 425
Query: 216 MGLVSEASKVFEQI-KDPNVISWTTLISGYSS-VGRHGVSLGIFREMVNDGMVFPDAGAL 273
G V E K FE + +D V+ + +GR G +G + +++ V P A A
Sbjct: 426 SGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAG-EIGEAKSFIDNMPVKPMASAW 484
Query: 274 SGVLVSCRCLGALASGKEIHGYGLKIMP 301
+L +CR + EI L + P
Sbjct: 485 GALLSACRIHKEVDLAGEIAEKLLSMEP 512
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 129/321 (40%), Gaps = 42/321 (13%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
++AC L +H + +G + + L+++YA + SA +F ++P N
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+ ++ + ++ + + MR G++ D ++KAC + A
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
+ S++DMY KC ++ A ++F+ +R+V W +++S + +R
Sbjct: 236 SIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGF---AKCER 292
Query: 187 AVEVLESMRV--------------------------------------DGCEPDVVTRNT 208
AVE + R +G E D V +
Sbjct: 293 AVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTS 352
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+D Y R G + A VF+ + + NVISW+++I+ + G +L F +M + +V P
Sbjct: 353 FIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVV-P 411
Query: 269 DAGALSGVLVSCRCLGALASG 289
++ +L +C G + G
Sbjct: 412 NSVTFVSLLSACSHSGNVKEG 432
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 4/214 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++L +CS+ SL K +H YM+ +G T I +YA C +++ A ++F +P
Sbjct: 315 LAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP 374
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ NV +++S++ +GL + ++ + +M+ + V P+ F +L AC+ + E
Sbjct: 375 ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWK 434
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS-WNSMMS-CYVC 180
+ ++D+ + G++ A D M + + S W +++S C +
Sbjct: 435 QFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIH 494
Query: 181 N--GLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
L+ E L SM + V+ N DA
Sbjct: 495 KEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADA 528
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 158/351 (45%), Gaps = 40/351 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LLQ ++ L+ +H +++ G + + LI +Y+ + A +F ++P+ N
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ +++++++ + HG+ + + + E R + SP+ Y+ ++AC+ L
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQ 169
Query: 125 XXXXXXXX-XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V ++D Y K G+++ A VFD + E+ +W +M+S V G
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 184 SQRAVEVLESMRVD-----------------------------------GCEPDVVTRNT 208
S ++++ + D G E D N
Sbjct: 230 SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV 289
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D+Y + G V A K+F + + N+ISWTTL+SGY H ++ +F M G+ P
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK-P 348
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D A S +L SC L AL G ++H Y +K G Y + +L+ +YA+
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT--NSLIDMYAK 397
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 162/360 (45%), Gaps = 52/360 (14%)
Query: 3 LNSLLQACSA--SKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
L+S +QACS + QL +++ G R + T LI Y ++ A +F
Sbjct: 149 LSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDA 208
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
LP+ + +T++++ + G + ++ + ++ V PDGY+ VL AC+ L LE
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL-PFLEG 267
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D + N ++D Y KCG V A ++F+ M +++ SW +++S Y
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 181 NGLSQRAVEVLESMRVDGCEPDV-----------------------------------VT 205
N L + A+E+ SM G +PD+
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYV 387
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHG---VSLGIFREMVN 262
N+++D Y + +++A KVF+ +V+ + +I GYS +G +L IFR+M
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM-R 446
Query: 263 DGMVFPDAGALSGVLVSCRCLGALASGKEIHG----YGLKIMPGEIFYRSAGAALLTLYA 318
++ P +L + L +L K+IHG YGL + +IF AG+AL+ +Y+
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL---DIF---AGSALIDVYS 500
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 135/280 (48%), Gaps = 9/280 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+A ++ SL +KQ+H M +G + F + LI +Y++C L+ + +F ++
Sbjct: 459 SLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK 518
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ + S+ A + + + + + E++ PD + F ++ A LA++ +
Sbjct: 519 DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASV-QLGQEF 577
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + N++LDMY+KCG E A + FD RDV WNS++S Y +G
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTL 240
++A+++LE M +G EP+ +T V+ A GLV + K FE + +P + +
Sbjct: 638 KKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCM 697
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+S GR L RE++ P A +L C
Sbjct: 698 VSLLGRAGR----LNKARELIEKMPTKPAAIVWRSLLSGC 733
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 151/359 (42%), Gaps = 50/359 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+++L ACS L KQ+H ++L +G LI Y C + +AH LF +P
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
N+ ++T++L+ + ++ L ++ +E + M G+ PD Y +L +CA L A L
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA-LGFGT 370
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V NS++DMY+KC + A +VFD DV +N+M+ Y G
Sbjct: 371 QVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLG 430
Query: 183 LS---QRAVEVLESMRVDGCEP-----------------------------------DVV 204
A+ + MR P D+
Sbjct: 431 TQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIF 490
Query: 205 TRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
+ ++D Y + ++ VF+++K +++ W ++ +GY + +L +F E+
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL-QLS 549
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIH----GYGLKIMPGEIFYRSAGAALLTLYAR 319
PD + ++ + L ++ G+E H GL+ P ALL +YA+
Sbjct: 550 RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP------YITNALLDMYAK 602
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 146/328 (44%), Gaps = 43/328 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIY----ADCDDLRSAHSLFRQ 60
+LLQ S S+ + +Q+H + + HG K + Y + AH +F +
Sbjct: 20 NLLQTYGVS-SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78
Query: 61 LPQP-NVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALL 118
+ +P NVF + +++ ++ G + Y EMR G V PD + +P ++KA +A +
Sbjct: 79 IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD-V 137
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
+ V NS+L +Y+ CGDV A +VFD+M E+D+ +WNS+++ +
Sbjct: 138 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 197
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVT--------------------------------- 205
NG + A+ + M G +PD T
Sbjct: 198 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 257
Query: 206 --RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
N ++D Y R G V EA +F+++ D N +SWT+LI G + G ++ +F+ M +
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 317
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKE 291
+ P G+L +C G + G E
Sbjct: 318 EGLLPCEITFVGILYACSHCGMVKEGFE 345
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L++A + + + +H ++ G + L+ +YA+C D+ SA+ +F ++P+ +
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ A+ S++ + +G + + Y EM KG+ PDG+ +L ACA++ A L
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA-LTLGKRVH 245
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+L N +LD+Y++CG VE A +FDEM +++ SW S++ NG +
Sbjct: 246 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGK 305
Query: 186 RAVEVLESMR-VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
A+E+ + M +G P +T ++ A G+V E + F ++++
Sbjct: 306 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 352
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 40/201 (19%)
Query: 156 AARVFDEMRER-DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG-CEPD----------- 202
A +VF ++ + +VF WN+++ Y G S A + MRV G EPD
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 203 ------------------------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
+ +N+++ Y G V+ A KVF+++ + ++++W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
++I+G++ G+ +L ++ EM + G + PD + +L +C +GAL GK +H Y +K
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 299 IMPGEIFYRSAGAALLTLYAR 319
+ G + LL LYAR
Sbjct: 251 V--GLTRNLHSSNVLLDLYAR 269
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL AC+ +L K++H YM+ G R + L+ +YA C + A +LF ++
Sbjct: 227 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N ++TS++ + +G ++ IE + M +G+ P F +L AC+ + E
Sbjct: 287 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEY 346
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMSCYVCNG 182
+ ++D+ ++ G V+ A M + +V W +++ +G
Sbjct: 347 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Query: 183 LSQRA 187
S A
Sbjct: 407 DSDLA 411
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 219 VSEASKVFEQIKDP-NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
+S A KVF +I+ P NV W TLI GY+ +G + ++REM G+V PD ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 278 VSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYA 318
+ + + G+ IH ++ G + Y +LL LYA
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIY--VQNSLLHLYA 167
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 148/290 (51%), Gaps = 20/290 (6%)
Query: 33 RKPFFT-TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
RK T T ++ Y L A LF+++P+ NV ++ +++ +++ G + +E + E
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDE 165
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M + + + ++KA Q + E D+ +++D +K G
Sbjct: 166 MPERNIVS----WNSMVKALVQRGRIDEAMNLFERMPRR-----DVVSWTAMVDGLAKNG 216
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
V+ A R+FD M ER++ SWN+M++ Y N A ++ + M E D + NT++
Sbjct: 217 KVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM----PERDFASWNTMIT 272
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
+ R +++A +F+++ + NVISWTT+I+GY + +L +F +M+ DG V P+ G
Sbjct: 273 GFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVG 332
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRS--AGAALLTLYAR 319
+L +C L L G++IH +++ + ++ +ALL +Y++
Sbjct: 333 TYVSILSACSDLAGLVEGQQIH----QLISKSVHQKNEIVTSALLNMYSK 378
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 115/229 (50%), Gaps = 8/229 (3%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+++ + + +++A QL M R +I + ++ A LF ++P+
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVM----PERDFASWNTMITGFIRNREMNKACGLFDRMPE 292
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV ++T+++ + + + + +++M R V P+ + +L AC+ LA L+E
Sbjct: 293 KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQ 352
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE--MRERDVFSWNSMMSCYVC 180
++ V +++L+MYSK G++ A ++FD + +RD+ SWNSM++ Y
Sbjct: 353 IHQLISKSVHQKNEI-VTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAH 411
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
+G + A+E+ MR G +P VT ++ A GLV + + F+ +
Sbjct: 412 HGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDL 460
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
K G + A ++FD + ERDV +W +++ Y+ G + A E+ + RVD +VVT
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD--RVDS-RKNVVTWTA 114
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
++ Y R +S A +F+++ + NV+SW T+I GY+ GR +L +F EM +V
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNGLSQRAVEVLESM 194
D+ V+ Y K GD+ A +FD + R +V +W +M+S Y L + + + E +
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY----LRSKQLSIAEML 131
Query: 195 RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSL 254
+ E +VV+ NT++D Y + G + +A ++F+++ + N++SW +++ GR ++
Sbjct: 132 FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAM 191
Query: 255 GIFREM 260
+F M
Sbjct: 192 NLFERM 197
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 142/327 (43%), Gaps = 42/327 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ACS + + +H +++ G + +T L+ +Y C ++ +F +PQ N
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN 172
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V A+ S+++ + IE + EM+ GV + + +L AC + ++
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 126 XXX-------XXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
++ + S++DMY+KCGD+ A +FD M ER + SWNS+++ Y
Sbjct: 233 FLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGY 292
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA-------------------------- 212
NG ++ A+ + M G PD VT +V+ A
Sbjct: 293 SQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDA 352
Query: 213 ---------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
Y + G A K FE ++ + I+WT +I G +S G +L IF+ M
Sbjct: 353 AIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEK 412
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGK 290
G PD GVL +C +G + G+
Sbjct: 413 GNATPDGITYLGVLYACSHIGLVEEGQ 439
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 156/364 (42%), Gaps = 50/364 (13%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDD---LRSAHSLF 58
H +L +SL + QLH M+ R ++LI C + L A S+F
Sbjct: 5 HYKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVF 64
Query: 59 RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
+ P+V+ + S++ +S + + Y EM KG SPD + FP VLKAC+ L +
Sbjct: 65 ESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRD-I 123
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
+ ++ V +L MY CG+V RVF+++ + +V +W S++S +
Sbjct: 124 QFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGF 183
Query: 179 VCNGLSQRAVEVLESMRVDGCE----------------PDVVT----------------- 205
V N A+E M+ +G + D+VT
Sbjct: 184 VNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYF 243
Query: 206 ----------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
+++D Y + G + A +F+ + + ++SW ++I+GYS G +L
Sbjct: 244 QSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALC 303
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLT 315
+F +M++ G+ PD V+ + G G+ IH Y K G + + AL+
Sbjct: 304 MFLDMLDLGIA-PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT--GFVKDAAIVCALVN 360
Query: 316 LYAR 319
+YA+
Sbjct: 361 MYAK 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 20/249 (8%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++Q CS + +H Y+ G + L+ +YA D SA F L +
Sbjct: 327 SMIQGCS-----QLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXX 123
+ A+T ++ + HG + + + M+ KG +PDG + VL AC+ + + E
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNG 182
+ ++D+ S+ G E A R+ M + +V W +++ NG
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL-----NG 496
Query: 183 LS-QRAVEVLESMRVDGCEPDVVTRNTVM---DAYCRMGLVSEASKVFEQIKDPNVISWT 238
+E+ + +R EP+ + + + Y + G ++ + E +K V
Sbjct: 497 CDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDK-- 554
Query: 239 TLISGYSSV 247
+ G+SSV
Sbjct: 555 --VLGHSSV 561
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 139/294 (47%), Gaps = 16/294 (5%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSH-RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
L+ AC + + KQ+H +++ +G T +++IY + L A +F ++PQP
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQP 181
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + ++ + R GL + +E + EM KG+ PD + L ACAQ+ AL +
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V +++DMY+KCG +E A VF ++ R+VFSW +++ Y G +
Sbjct: 242 EFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYA 301
Query: 185 QRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
++A+ LE + R DG +PD V V+ A G + E + E ++ P ++
Sbjct: 302 KKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYS 361
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC-----LGALA 287
++ GR +L + +M P A +L CR LG LA
Sbjct: 362 CIVDLMCRAGRLDDALNLIEKMPMK----PLASVWGALLNGCRTHKNVELGELA 411
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 131/332 (39%), Gaps = 43/332 (12%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRS----AHSLFR 59
SL+ A ++ Q K H ++HG HR + +KL+ + +L A S+F
Sbjct: 12 KSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFD 71
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEM---RFKGVSPDGYVFPKVLKACAQLAA 116
+ PN F + +++ SR + + M + ++P F ++ AC +
Sbjct: 72 SIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACF 131
Query: 117 LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS 176
D V VL +Y + + A +VFDE+ + DV W+ +M+
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMN 191
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEP----------------------------------- 201
YV GL +EV M V G EP
Sbjct: 192 GYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIE 251
Query: 202 -DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
DV ++D Y + G + A +VF+++ NV SW LI GY++ G ++ +
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERL 311
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ + PD+ L GVL +C G L G+ +
Sbjct: 312 EREDGIKPDSVVLLGVLAACAHGGFLEEGRSM 343
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
D + V+ Y L+ +A KVF++I P+V+ W L++GY G L +FREM+
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML 210
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK--IMPGEIFYRSAGAALLTLYAR 319
G+ PD +++ L +C +GALA GK IH + K + ++F G AL+ +YA+
Sbjct: 211 VKGLE-PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVF---VGTALVDMYAK 266
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 142/318 (44%), Gaps = 37/318 (11%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+AC+ + + K +H ++++ G L +Y +C +++ LF + + +V
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++TS++ + R G + +ET+ +MR V P+ F + ACA L+ L+
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLV-WGEQLHC 334
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
L V NS++ MYS CG++ A+ +F MR RD+ SW++++ Y G +
Sbjct: 335 NVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEE 394
Query: 187 AVEVLESMRVDGCEP-----------------------------------DVVTRNTVMD 211
+ MR G +P + R+++++
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLIN 454
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + G + EAS +F + +++S T +I+GY+ G+ ++ +F + + G PD+
Sbjct: 455 MYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFR-PDSV 513
Query: 272 ALSGVLVSCRCLGALASG 289
VL +C G L G
Sbjct: 514 TFISVLTACTHSGQLDLG 531
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 134/330 (40%), Gaps = 37/330 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ +L+AC S ++ + LH Y + + + L+ +Y + + +F ++P
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
N +T+I+ G ++ + ++EM D Y F LKACA L ++
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ-VKYGK 229
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
L V NS+ MY++CG+++ +F+ M ERDV SW S++ Y G
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-----------------------------------RN 207
+AVE MR P+ T N
Sbjct: 290 QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++M Y G + AS +F+ ++ ++ISW+T+I GY G F M G
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG-TK 408
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGL 297
P AL+ +L + + G+++H L
Sbjct: 409 PTDFALASLLSVSGNMAVIEGGRQVHALAL 438
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 144/317 (45%), Gaps = 16/317 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+ AC++ L +QLH +L G + + ++++Y+ C +L SA LF+ +
Sbjct: 315 SMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR 374
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++++I+ + + G + + ++ MR G P + +L +A ++E
Sbjct: 375 DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMA-VIEGGRQV 433
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V +S+++MYSKCG ++ A+ +F E D+ S +M++ Y +G S
Sbjct: 434 HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKS 493
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTT 239
+ A+++ E G PD VT +V+ A G + F +++ P +
Sbjct: 494 KEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGC 553
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
++ GR L +M+N+ D + +L++C+ G + G+ L++
Sbjct: 554 MVDLLCRAGR----LSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILEL 609
Query: 300 MPGEIFYRSAGAALLTL 316
P + AL+TL
Sbjct: 610 DP------TCATALVTL 620
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 133/321 (41%), Gaps = 39/321 (12%)
Query: 10 CSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAF 69
C+ S SL Q + + + F ++ + +LR+A +F ++P ++ ++
Sbjct: 15 CTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSW 74
Query: 70 TSILAFHSRHGLARQCIETYAEMRF--KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
TSI+ + + + + ++ MR VSPD V VLKAC Q ++ +
Sbjct: 75 TSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ-SSNIAYGESLHAY 133
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA 187
+ V +S+LDMY + G ++ + RVF EM R+ +W ++++ V G +
Sbjct: 134 AVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEG 193
Query: 188 VEVLESMR-----------------------------------VDGCEPDVVTRNTVMDA 212
+ M V G + N++
Sbjct: 194 LTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATM 253
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
Y G + + +FE + + +V+SWT+LI Y +G+ ++ F +M N V P+
Sbjct: 254 YTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNS-QVPPNEQT 312
Query: 273 LSGVLVSCRCLGALASGKEIH 293
+ + +C L L G+++H
Sbjct: 313 FASMFSACASLSRLVWGEQLH 333
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L SLL + +Q+H L G + + LI +Y+ C ++ A +F +
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ + T+++ ++ HG +++ I+ + + G PD F VL AC L
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH 533
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCN 181
++D+ + G + A ++ +EM ++D W +++
Sbjct: 534 YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTR-NTVMDAYCRMGLVSEASKVFEQIKDPNVIS---W 237
G +R E R+ +P T T+ + Y G + EA+ V + +K VI W
Sbjct: 594 GDIERGRRAAE--RILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGW 651
Query: 238 TTL 240
+++
Sbjct: 652 SSI 654
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM-VNDGM 265
N+ + + G + A +VF+++ +++SWT++I Y + +L +F M V D
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
V PD LS VL +C +A G+ +H Y +K Y G++LL +Y R
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVY--VGSSLLDMYKR 155
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 146/323 (45%), Gaps = 38/323 (11%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+LL++ ++L+ +Q+H +++ G T ++ +Y C L A +F Q+
Sbjct: 188 TTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAV 247
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
A T ++ +++ G AR ++ + ++ +GV D +VF VLKACA L L
Sbjct: 248 KKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE-LNLGKQ 306
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
++ V ++D Y KC E A R F E+RE + SW++++S Y
Sbjct: 307 IHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQ 366
Query: 184 SQRAVEVLESMRVDGC---------------------------EPDVVTRNTV------- 209
+ AV+ +S+R D + R+ +
Sbjct: 367 FEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES 426
Query: 210 --MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+ Y + G + +A++VFE + +P++++WT ISG++ G +L +F +MV+ GM
Sbjct: 427 ALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMK- 485
Query: 268 PDAGALSGVLVSCRCLGALASGK 290
P++ VL +C G + GK
Sbjct: 486 PNSVTFIAVLTACSHAGLVEQGK 508
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 152/349 (43%), Gaps = 38/349 (10%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L +AC +SL+ + LH M + + ++Q+Y +C L A LF ++ + N
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELN 148
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ T++++ ++ G+ + + ++ M G P ++ +LK+ A L+
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRA-LDFGRQIH 207
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ + +++MY KCG + GA RVFD+M + + +M Y G ++
Sbjct: 208 AHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRAR 267
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDA----------------YCRMGLVSEAS------ 223
A+++ + +G E D + V+ A ++GL SE S
Sbjct: 268 DALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLV 327
Query: 224 -------------KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
+ F++I++PN +SW+ +ISGY + + ++ F+ + + ++
Sbjct: 328 DFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNS 387
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ + +C L G ++H +K I + +AL+T+Y++
Sbjct: 388 FTYTSIFQACSVLADCNIGGQVHADAIK--RSLIGSQYGESALITMYSK 434
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 12/304 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC++ + LN KQ+H + G + T L+ Y C SA F+++ +PN
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP-DGYVFPKVLKACAQLAALLEXXXXX 124
++++I++ + + + ++T+ +R K S + + + + +AC+ LA
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC-NIGGQV 409
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
++++ MYSKCG ++ A VF+ M D+ +W + +S + G +
Sbjct: 410 HADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA 469
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-----KDPNVISWTT 239
A+ + E M G +P+ VT V+ A GLV + + + P + +
Sbjct: 470 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDC 529
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+I Y+ G +L + M + PDA + L C L G EI G L+
Sbjct: 530 MIDIYARSGLLDEALKFMKNMPFE----PDAMSWKCFLSGCWTHKNLELG-EIAGEELRQ 584
Query: 300 MPGE 303
+ E
Sbjct: 585 LDPE 588
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 117/279 (41%), Gaps = 41/279 (14%)
Query: 77 SRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
S+H + E EM GVS Y + + +AC +L +L
Sbjct: 59 SKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSV 118
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
L + N VL MY +C +E A ++FDEM E + S +M+S Y G+ +AV + M
Sbjct: 119 L-LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 197 DGCEP-----------------------------------DVVTRNTVMDAYCRMGLVSE 221
G +P + +++ Y + G +
Sbjct: 178 SGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVG 237
Query: 222 ASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
A +VF+Q+ ++ T L+ GY+ GR +L +F ++V +G+ + D+ S VL +C
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEW-DSFVFSVVLKACA 296
Query: 282 CLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
L L GK+IH K+ + E+ S G L+ Y +
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEV---SVGTPLVDFYIK 332
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 37/332 (11%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG 80
Q+H ++ +G + + LI +Y C ++R A LF + +V + S+++ ++ +G
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 81 LARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVC 140
L + + + MR V F V+K CA L L D +
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE-LRFTEQLHCSVVKYGFLFDQNIR 333
Query: 141 NSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
+++ YSKC + A R+F E+ +V SW +M+S ++ N + AV++ M+ G
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 200 EPDVVTRNTV-------------------------------MDAYCRMGLVSEASKVFEQ 228
P+ T + + +DAY ++G V EA+KVF
Sbjct: 394 RPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 453
Query: 229 IKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGA-LA 287
I D ++++W+ +++GY+ G ++ +F E+ G + P+ S +L C A +
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG-IKPNEFTFSSILNVCAATNASMG 512
Query: 288 SGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
GK+ HG+ +K S +ALLT+YA+
Sbjct: 513 QGKQFHGFAIKSRLDSSLCVS--SALLTMYAK 542
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 162/355 (45%), Gaps = 50/355 (14%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP-Q 63
S+++ C+ K L +QLH ++ +G T L+ Y+ C + A LF+++
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
NV ++T++++ ++ + ++ ++EM+ KGV P+ + + +L A ++
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP-----SE 414
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
V ++LD Y K G VE AA+VF + ++D+ +W++M++ Y G
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDA------------------------------- 212
++ A+++ + G +P+ T +++++
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 213 -----YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
Y + G + A +VF++ ++ +++SW ++ISGY+ G+ +L +F+EM V
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM-KKRKVK 593
Query: 268 PDAGALSGVLVSCRCLGALASGK---EIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D GV +C G + G+ +I KI P + + ++ LY+R
Sbjct: 594 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT----KEHNSCMVDLYSR 644
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 16/283 (5%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG 80
++H ++ R T L+ Y + A +F + ++ A++++LA +++ G
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 81 LARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVC 140
I+ + E+ G+ P+ + F +L CA A + L V
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
+++L MY+K G++E A VF RE+D+ SWNSM+S Y +G + +A++V + M+ +
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 593
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFE-QIKD----PNVISWTTLISGYSSVGRHGVSLG 255
D VT V A GLV E K F+ ++D P + ++ YS G+ ++
Sbjct: 594 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 653
Query: 256 IFREMVNDGMVFPDAGAL-SGVLVSCRC-----LGALASGKEI 292
+ M N P + +L +CR LG LA+ K I
Sbjct: 654 VIENMPN-----PAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 144/339 (42%), Gaps = 48/339 (14%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR 78
+QLH + G T L+ Y + + +F ++ + NV +T++++ ++R
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
+ + + + + M+ +G P+ + F L A+ + +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE-EGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD- 197
V NS++++Y KCG+V A +FD+ + V +WNSM+S Y NGL A+ + SMR++
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 198 ----------------------------------GCEPDVVTRNTVMDAYCRMGLVSEAS 223
G D R +M AY + + +A
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 224 KVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC 282
++F++I NV+SWT +ISG+ ++ +F EM G V P+ S +L +
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILTALPV 409
Query: 283 LGALASGKEIHGYGLKIMPGEIFYRSA--GAALLTLYAR 319
+ S E+H +K + RS+ G ALL Y +
Sbjct: 410 I----SPSEVHAQVVKTN----YERSSTVGTALLDAYVK 440
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 139/304 (45%), Gaps = 39/304 (12%)
Query: 51 LRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA 110
L +AH+LF + P + ++ S+L SR G ++ + + G+ D +F VLK
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 111 CAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS 170
A L L D+ V S++D Y K + + +VFDEM+ER+V +
Sbjct: 103 SATLCDEL-FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT------------------------- 205
W +++S Y N ++ + + M+ +G +P+ T
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 206 ----------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
N++++ Y + G V +A +F++ + +V++W ++ISGY++ G +LG
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLT 315
+F M + + ++ + + V+ C L L +++H +K G +F ++ AL+
Sbjct: 282 MFYSMRLNYVRLSES-SFASVIKLCANLKELRFTEQLHCSVVKY--GFLFDQNIRTALMV 338
Query: 316 LYAR 319
Y++
Sbjct: 339 AYSK 342
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 122/225 (54%), Gaps = 1/225 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+AC+ +K+L + +QLH + G + LI +Y +C+D+ SA +F ++ +P
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEP 193
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
V + +++ ++R + + + EM+ K + P+ VL +CA L +L +
Sbjct: 194 CVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSL-DLGKWI 252
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
++V +++DM++KCG ++ A +F++MR +D +W++M+ Y +G +
Sbjct: 253 HKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKA 312
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
++++ + E MR + +PD +T +++A G V E K F Q+
Sbjct: 313 EKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 138/320 (43%), Gaps = 43/320 (13%)
Query: 11 SASKSLNQAKQLHHYMLLHGSHRKPF-FTTKLIQIYADC---DDLRSAHSLFRQLPQPNV 66
S SL + Q+ Y + SH + F KLI + + A LF + +P++
Sbjct: 37 SKCNSLRELMQIQAYAI--KSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
F S+ +SR + + E+ G+ PD Y FP +LKACA +A LE
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA-VAKALEEGRQLHC 153
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
++ VC ++++MY++C DV+ A VFD + E V +N+M++ Y
Sbjct: 154 LSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNE 213
Query: 187 AVEVLESMRVDGCEPDVVT-----------------------------------RNTVMD 211
A+ + M+ +P+ +T ++D
Sbjct: 214 ALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALID 273
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
+ + G + +A +FE+++ + +W+ +I Y++ G+ S+ +F M ++ V PD
Sbjct: 274 MFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN-VQPDEI 332
Query: 272 ALSGVLVSCRCLGALASGKE 291
G+L +C G + G++
Sbjct: 333 TFLGLLNACSHTGRVEEGRK 352
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L +C+ SL+ K +H Y H + T LI ++A C L A S+F ++
Sbjct: 233 LLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ A+++++ ++ HG A + + + MR + V PD F +L AC+ + E
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRK 352
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
++ S++D+ S+ G++E A D++
Sbjct: 353 YFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMM-SCYVCNGLSQ-RAVE 189
D+ + NS+ YS+ + +F E+ E D +++ S++ +C V L + R +
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 190 VLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGR 249
L SM++ G + +V T+++ Y V A VF++I +P V+ + +I+GY+ R
Sbjct: 153 CL-SMKL-GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 250 HGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSA 309
+L +FREM + P+ L VL SC LG+L GK IH Y K Y
Sbjct: 211 PNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK--HSFCKYVKV 267
Query: 310 GAALLTLYAR 319
AL+ ++A+
Sbjct: 268 NTALIDMFAK 277
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+SLL++CS K +H ++L G P+ T L+ +YA D+ SA +F ++P
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 63 QPNVFAFTSILAFHSRHGLARQC------------------IETYAE--------MRFKG 96
+ ++ + T+++ +++ G I+ YA+ M F+
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 97 V------SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
+ PD L AC+Q+ AL E +++VC ++DMYSKC
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGAL-ETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR-VDGCEPDVVTRNTV 209
G +E A VF++ +D+ +WN+M++ Y +G SQ A+ + M+ + G +P +T
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 210 MDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
+ A GLV+E ++FE + P + + L+S G+ + + M D
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 427
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGY--GLKIMPGEIF 305
D+ S VL SC+ G GKEI Y GL I I+
Sbjct: 428 ----DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIY 466
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 47/286 (16%)
Query: 13 SKSLNQAKQLH-----HYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVF 67
S+S+++ Q+H H +LLH R P KL + YA +R + +LF Q P++F
Sbjct: 39 SQSVDEVLQIHAAILRHNLLLHP--RYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLF 96
Query: 68 AFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
FT+ + S +GL Q Y ++ ++P+ + F +LK+C+ + L
Sbjct: 97 LFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKL-----IHTH 151
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA 187
D V ++D+Y+K GDV A +VFD M ER + S +M++CY G + A
Sbjct: 152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 211
Query: 188 VEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSV 247
+ +SM CE D+V+ N ++D Y + G ++A
Sbjct: 212 RALFDSM----CERDIVSWNVMIDGYAQHGFPNDA------------------------- 242
Query: 248 GRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
L +F++++ +G PD + L +C +GAL +G+ IH
Sbjct: 243 ------LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 156/350 (44%), Gaps = 40/350 (11%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFT-TKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+AC + +N + +H ++ + + + LI +Y C + A +F +L +P+
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++S+++ ++G Q +E + M V+PD ++ AC +L+
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNS-RLGRCV 185
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL + NS+L+ Y+K + A +F + E+DV SW+++++CYV NG +
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 185 QRAVEVLESMRVDGCEPDVVT-----------------RNT------------------V 209
A+ V M DG EP+V T R T +
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + EA VF +I +V+SW LISG++ G S+ F M+ + PD
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
A + VL SC LG L K H Y +K G GA+L+ LY+R
Sbjct: 366 AILMVKVLGSCSELGFLEQAKCFHSYVIKY--GFDSNPFIGASLVELYSR 413
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 140/326 (42%), Gaps = 37/326 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L+ AC+ + + +H +++ G L+ YA + A +LF+ +
Sbjct: 166 LITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 225
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V ++++++A + ++G A + + + +M G P+ VL+ACA A LE
Sbjct: 226 EKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAA-AHDLEQGR 284
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+++V +++DMY KC E A VF + +DV SW +++S + NG
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Query: 183 LSQRAVEVLESMRVDG-CEPDVVTRNTVM------------------------------- 210
++ R++E M ++ PD + V+
Sbjct: 345 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 404
Query: 211 ----DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+ Y R G + ASKVF I + + WT+LI+GY G+ +L F MV V
Sbjct: 405 ASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV 464
Query: 267 FPDAGALSGVLVSCRCLGALASGKEI 292
P+ +L +C G + G I
Sbjct: 465 KPNEVTFLSILSACSHAGLIHEGLRI 490
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 140/283 (49%), Gaps = 12/283 (4%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+LQAC+A+ L Q ++ H + G + +T L+ +Y C A+++F ++P+ +
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKD 329
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQLAALLEXXXXX 124
V ++ ++++ + +G+A + IE ++ M + PD + KVL +C++L LE
Sbjct: 330 VVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL-GFLEQAKCF 388
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + S++++YS+CG + A++VF+ + +D W S+++ Y +G
Sbjct: 389 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 448
Query: 185 QRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWT 238
+A+E M + +P+ VT +++ A GL+ E ++F+ + + PN+ +
Sbjct: 449 TKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYA 508
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
L+ VG ++ I + M P L +L +CR
Sbjct: 509 VLVDLLGRVGDLDTAIEITKRMPFS----PTPQILGTLLGACR 547
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 130/302 (43%), Gaps = 39/302 (12%)
Query: 54 AHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
A +F ++ + +++ + ++L SR + + ++ M PD + P LKAC +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 114 LAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNS 173
L + DL V +S++ MY KCG + A R+FDE+ + D+ +W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 174 MMSCYVCNGLSQRAVEVLESM-RVDGCEPDVVTR-------------------------- 206
M+S + NG +AVE M PD VT
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 207 ---------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIF 257
N++++ Y + EA +F+ I + +VISW+T+I+ Y G +L +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 258 REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLY 317
+M++DG P+ + VL +C L G++ H L I G AL+ +Y
Sbjct: 253 NDMMDDG-TEPNVATVLCVLQACAAAHDLEQGRKTH--ELAIRKGLETEVKVSTALVDMY 309
Query: 318 AR 319
+
Sbjct: 310 MK 311
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 38/326 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+LQ C+ + K +H Y + + T +I +YA C A F +LP
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ AF ++ +++ G A + + Y M+ GV PD +L+ CA +
Sbjct: 464 IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA-FCSDYARGS 522
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCN 181
+ V +++++M++KC + A +FD+ E+ SWN MM+ Y+ +
Sbjct: 523 CVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLH 582
Query: 182 GLSQRAVEVLESMRVDGCEPDVVT-----------------------------------R 206
G ++ AV M+V+ +P+ VT
Sbjct: 583 GQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVG 642
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
N+++D Y + G++ + K F +I + ++SW T++S Y++ G ++ +F M + +
Sbjct: 643 NSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM-QENEL 701
Query: 267 FPDAGALSGVLVSCRCLGALASGKEI 292
PD+ + VL +CR G + GK I
Sbjct: 702 KPDSVSFLSVLSACRHAGLVEEGKRI 727
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 153/349 (43%), Gaps = 43/349 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+AC+ S + ++H + G + T L+++Y DL SA +F ++ +V
Sbjct: 107 LKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDV 166
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+ ++++ +++G + + + +MR V D ++ A ++L +
Sbjct: 167 VTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLE---KSDVCRCL 223
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
+ ++DMY C D+ A VF+E+ +D SW +MM+ Y NG +
Sbjct: 224 HGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEE 283
Query: 187 AVEVLESMR-----------------------------------VDGCEPDVVTRNTVMD 211
+E+ + MR G DV ++M
Sbjct: 284 VLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMS 343
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + G + A ++F I+D +V+SW+ +I+ Y G+H ++ +FR+M+ + P+A
Sbjct: 344 MYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH-IKPNAV 402
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
L+ VL C + A GK IH Y +K + E+ A++++YA+
Sbjct: 403 TLTSVLQGCAGVAASRLGKSIHCYAIKADIESEL---ETATAVISMYAK 448
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 128/261 (49%), Gaps = 7/261 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP-QP 64
+LQ C+ + ++ ++ HG + LI ++ CD L +A LF + +
Sbjct: 508 MLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEK 567
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++ ++ + HG A + + T+ +M+ + P+ F +++A A+L+AL
Sbjct: 568 STVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSAL-RVGMSV 626
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
V NS++DMY+KCG +E + + F E+ + + SWN+M+S Y +GL+
Sbjct: 627 HSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLA 686
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS-----WTT 239
AV + SM+ + +PD V+ +V+ A GLV E ++FE++ + + I +
Sbjct: 687 SCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYAC 746
Query: 240 LISGYSSVGRHGVSLGIFREM 260
++ G G ++ + R M
Sbjct: 747 MVDLLGKAGLFGEAVEMMRRM 767
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 135/297 (45%), Gaps = 37/297 (12%)
Query: 37 FTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
F++ LI +Y +C DL +A S+F ++ + + ++ +++A ++ +G + +E + MR
Sbjct: 236 FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYD 295
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
V + L+A A + L++ D+ V S++ MYSKCG++E A
Sbjct: 296 VRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIG-DVSVATSLMSMYSKCGELEIA 354
Query: 157 ARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR--------------VDGC--- 199
++F + +RDV SW++M++ Y G A+ + M + GC
Sbjct: 355 EQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGV 414
Query: 200 ------------------EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLI 241
E ++ T V+ Y + G S A K FE++ + +++ L
Sbjct: 415 AASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALA 474
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
GY+ +G + +++ M G V PD+ + G+L +C A G ++G +K
Sbjct: 475 QGYTQIGDANKAFDVYKNMKLHG-VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK 530
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 143/333 (42%), Gaps = 42/333 (12%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG 80
Q+H +++ G KP +LI Y+ + +F + P V + S++ ++R G
Sbjct: 23 QVHGSLIVSG--LKPH--NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 81 LARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
L R+ + + M KG+ PD Y F LKACA + + D+ +
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAG-SMDFKKGLRIHDLIAEMGLESDVYI 137
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR---- 195
++++MY K D+ A +VFD+M +DV +WN+M+S NG S A+ + MR
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCV 197
Query: 196 -------------VDGCEPDVVTR----------------NTVMDAYCRMGLVSEASKVF 226
V E V R + ++D YC + A VF
Sbjct: 198 DIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVF 257
Query: 227 EQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
E++ + SW T+++ Y+ G L +F M N V + A + L + +G L
Sbjct: 258 EEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYD-VRMNKVAAASALQAAAYVGDL 316
Query: 287 ASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G IH Y ++ G I S +L+++Y++
Sbjct: 317 VKGIAIHDYAVQ--QGLIGDVSVATSLMSMYSK 347
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 140/334 (41%), Gaps = 40/334 (11%)
Query: 22 LHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGL 81
+H Y + G T L+ +Y+ C +L A LF + +V ++++++A + + G
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 82 ARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCN 141
+ I + +M + P+ VL+ CA +AA +L
Sbjct: 382 HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS-RLGKSIHCYAIKADIESELETAT 440
Query: 142 SVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP 201
+V+ MY+KCG A + F+ + +D ++N++ Y G + +A +V ++M++ G P
Sbjct: 441 AVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCP 500
Query: 202 DVVTRNTVMD--AYC--------------RMGLVSE-------------------ASKVF 226
D T ++ A+C + G SE A +F
Sbjct: 501 DSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLF 560
Query: 227 EQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGA 285
++ + + +SW +++GY G+ ++ FR+M + P+A ++ + L A
Sbjct: 561 DKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQ-PNAVTFVNIVRAAAELSA 619
Query: 286 LASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L G +H I G G +L+ +YA+
Sbjct: 620 LRVGMSVHSS--LIQCGFCSQTPVGNSLVDMYAK 651
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 188 VEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSV 247
++V S+ V G +P N +++AY + +F+ ++DP V+ W ++I GY+
Sbjct: 22 LQVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRA 77
Query: 248 GRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFY 306
G H +LG F M + + PD + + L +C G IH ++ + +++
Sbjct: 78 GLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYI 137
Query: 307 RSAGAALLTLYAR 319
G AL+ +Y +
Sbjct: 138 ---GTALVEMYCK 147
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 16/294 (5%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSH-RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
L+ AC + + KQ+H +++ +G T +++IY + L A +F ++PQP
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQP 181
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + ++ + R GL + +E + EM +G+ PD + L ACAQ+ AL +
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V +++DMY+KCG +E A VF+++ R+VFSW +++ Y G +
Sbjct: 242 EFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYA 301
Query: 185 QRAVEVLESM-RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
++A L+ + R DG +PD V V+ A G + E + E ++ P ++
Sbjct: 302 KKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYS 361
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC-----LGALA 287
++ GR +L + +M P A +L CR LG LA
Sbjct: 362 CIVDLMCRAGRLDDALDLIEKMPMK----PLASVWGALLNGCRTHKNVELGELA 411
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 130/330 (39%), Gaps = 43/330 (13%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRS----AHSLFR 59
SL+ A ++ Q K H ++HG HR + +KL+ + +L A S+F
Sbjct: 12 KSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFD 71
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEM---RFKGVSPDGYVFPKVLKACAQLAA 116
+ PN F + +++ SR + + M + ++P F ++ AC +
Sbjct: 72 SIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACF 131
Query: 117 LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS 176
D V VL +Y + + A +VFDE+ + DV W+ +M+
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMN 191
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEP----------------------------------- 201
YV GL +EV + M V G EP
Sbjct: 192 GYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE 251
Query: 202 -DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
DV ++D Y + G + A +VFE++ NV SW LI GY++ G + +
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRI 311
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+ + PD+ L GVL +C G L G+
Sbjct: 312 EREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
V+ Y L+ +A KVF++I P+V+ W L++GY G L +F+EM+ G + P
Sbjct: 158 VLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG-IEP 216
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLK--IMPGEIFYRSAGAALLTLYAR 319
D +++ L +C +GALA GK IH + K + ++F G AL+ +YA+
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF---VGTALVDMYAK 266
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 151/358 (42%), Gaps = 51/358 (14%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L Q + S S+ K H +M+ + + L+ +Y C +L A LF ++P+ N
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ +F S+++ +++ G Q +E + E R + D + + L C + L +
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDL-DLGELLH 171
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ + N ++DMYSKCG ++ A +FD ERD SWNS++S YV G ++
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAE 231
Query: 186 RAVEVLESMRVDGC--------------------------------------EPDVVTRN 207
+ +L M DG E D+V R
Sbjct: 232 EPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRT 291
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGR-----HGVSLGIFREMVN 262
++D Y + G + EA K+F + NV+++ +ISG+ + + +F +M
Sbjct: 292 ALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQR 351
Query: 263 DGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK--IMPGEIFYRSAGAALLTLYA 318
G+ P S VL +C L G++IH K E G+AL+ LYA
Sbjct: 352 RGLE-PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFI----GSALIELYA 404
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 117/249 (46%), Gaps = 6/249 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ACSA+K+L +Q+H + + F + LI++YA F + +
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQD 423
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++TS++ H ++ + + ++ + P+ Y ++ ACA AAL
Sbjct: 424 IASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQG 483
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
V S + MY+K G++ A +VF E++ DV ++++M+S +G +
Sbjct: 484 YAIKSGIDAFT-SVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSAN 542
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
A+ + ESM+ G +P+ V+ A C GLV++ K F+ +K +PN +T L
Sbjct: 543 EALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCL 602
Query: 241 ISGYSSVGR 249
+ GR
Sbjct: 603 VDLLGRTGR 611
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 141/329 (42%), Gaps = 46/329 (13%)
Query: 3 LNSLLQACSASKS---LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFR 59
L S+L+AC + + + + +H Y G T L+ +YA L+ A LF
Sbjct: 252 LGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFS 311
Query: 60 QLPQPNVFAFTSILA-FHSRHGL----ARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL 114
+P NV + ++++ F + + + + + +M+ +G+ P F VLKAC+
Sbjct: 312 LMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSA- 370
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
A LE D + ++++++Y+ G E + F ++D+ SW SM
Sbjct: 371 AKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSM 430
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA---------------------- 212
+ C+V N + A ++ + P+ T + +M A
Sbjct: 431 IDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGI 490
Query: 213 -------------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
Y + G + A++VF ++++P+V +++ +IS + G +L IF
Sbjct: 491 DAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFES 550
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALAS 288
M G + P+ A GVL++C C G L +
Sbjct: 551 MKTHG-IKPNQQAFLGVLIAC-CHGGLVT 577
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 45/214 (21%)
Query: 146 MYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR---------- 195
MY KC ++ A ++FD M ER++ S+NS++S Y G ++A+E+ R
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 196 -------------------------VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
V+G V N ++D Y + G + +A +F++
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 231 DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL----GAL 286
+ + +SW +LISGY VG L + +M DG+ AL VL +C C+ G +
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTY-ALGSVLKAC-CINLNEGFI 268
Query: 287 ASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
G IH Y K+ M +I R+ ALL +YA+
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRT---ALLDMYAK 299
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 165/351 (47%), Gaps = 42/351 (11%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+S+L AC++ + L K + ++ G+ F T ++ +YA C + A +F ++P
Sbjct: 255 SSVLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
P+V ++T +L+ +++ A +E + EMR GV + V+ AC + + + E
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF---DEMRERDVFSWNSMMSCYVC 180
D V +++ MYSK GD++ + +VF D+++ +++ N M++ +
Sbjct: 374 HAWVFKSGFYL-DSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQ 430
Query: 181 NGLSQRAVEVL-----ESMRVD---------------------------GCEPDVVTRNT 208
+ +A+ + E +R D G D+ ++
Sbjct: 431 SKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS 490
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+ Y + G + E+ K+F+ I + W ++ISG++ G ++G+F EM++DG P
Sbjct: 491 LFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTS-P 549
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D L+ VL C +L GKEIHGY L+ G G+AL+ +Y++
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLR--AGIDKGMDLGSALVNMYSK 598
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 143/306 (46%), Gaps = 10/306 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++L CS+ SL + K++H Y L G + + L+ +Y+ C L+ A ++ +LP
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + + +S+++ +S+HGL + + +M G + D + +LKA A L+
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAA-LSDESSLGA 672
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V +S+L MYSK G ++ + F ++ D+ +W ++++ Y +G
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHG 732
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA-----SKVFEQIKDPNVISW 237
+ A++V M+ G +PD VT V+ A GLV E+ S V + +P +
Sbjct: 733 KANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHY 792
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
++ GR L +N+ + PDA +L +C+ G + GK +
Sbjct: 793 VCMVDALGRSGR----LREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAI 848
Query: 298 KIMPGE 303
++ P +
Sbjct: 849 ELEPSD 854
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 129/300 (43%), Gaps = 37/300 (12%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
LN KQ+H Y L G + L +Y+ C L ++ LF+ +P + + S+++
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISG 525
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
+ +G R+ I ++EM G SPD VL C+ + L
Sbjct: 526 FNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS-LPRGKEIHGYTLRAGIDK 584
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
+ + +++++MYSKCG ++ A +V+D + E D S +S++S Y +GL Q + M
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMV 644
Query: 196 VDGCEPDVVTRNTVMDA-----------------------------------YCRMGLVS 220
+ G D ++++ A Y + G +
Sbjct: 645 MSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSID 704
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+ K F QI P++I+WT LI+ Y+ G+ +L ++ M G PD GVL +C
Sbjct: 705 DCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFK-PDKVTFVGVLSAC 763
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 152/357 (42%), Gaps = 56/357 (15%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFF----TTKLIQIYADCDDLRSAHSLFRQ 60
S++ ACSA QA + H FF + LI +++ A+ +FR
Sbjct: 155 SVISACSAL----QAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRD 210
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
NV+ + +I+A R+ + + EM PD Y + VL ACA L L
Sbjct: 211 SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKL--R 268
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ VC +++D+Y+KCG + A VF + V SW M+S Y
Sbjct: 269 FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTK 328
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEAS----------------- 223
+ + A+E+ + MR G E + T +V+ A R +V EAS
Sbjct: 329 SNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSV 388
Query: 224 ------------------KVFEQIKD---PNVISWTTLISGYSSVGRHGVSLGIFREMVN 262
+VFE + D N+++ +I+ +S + G ++ +F M+
Sbjct: 389 AAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQ 446
Query: 263 DGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+G+ D ++ +L CL GK++HGY LK G + + G++L TLY++
Sbjct: 447 EGLR-TDEFSVCSLLSVLDCLNL---GKQVHGYTLK--SGLVLDLTVGSSLFTLYSK 497
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 151/336 (44%), Gaps = 42/336 (12%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
QA L Y+L F T L+ Y++ + A LF +PQP+V + +++ +
Sbjct: 71 QAHLLRRYLLPF----DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYK 126
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
+H L + + +++M F G + + V+ AC+ L A L ++
Sbjct: 127 QHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV 186
Query: 138 RVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
V ++++D++SK E A +VF + +V+ WN++++ + N ++ M V
Sbjct: 187 -VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVG 245
Query: 198 GCEPDVVTRNTVM----------------------------------DAYCRMGLVSEAS 223
+PD T ++V+ D Y + G ++EA
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAM 305
Query: 224 KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
+VF +I +P+V+SWT ++SGY+ +L IF+EM + G+ + ++ V+ +C
Sbjct: 306 EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNC-TVTSVISACGRP 364
Query: 284 GALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ ++H + K G S AAL+++Y++
Sbjct: 365 SMVCEASQVHAWVFK--SGFYLDSSVAAALISMYSK 398
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 148/356 (41%), Gaps = 49/356 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ S++ AC + +A Q+H ++ G + LI +Y+ D+ + +F L
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 63 --QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL--L 118
Q I +F S+ + I + M +G+ D + C+ L+ L L
Sbjct: 414 DIQRQNIVNVMITSF-SQSKKPGKAIRLFTRMLQEGLRTDEF------SVCSLLSVLDCL 466
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
DL V +S+ +YSKCG +E + ++F + +D W SM+S +
Sbjct: 467 NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM---------------------------- 210
G + A+ + M DG PD T V+
Sbjct: 527 NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGM 586
Query: 211 -------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
+ Y + G + A +V++++ + + +S ++LISGYS G +FR+MV
Sbjct: 587 DLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS 646
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G D+ A+S +L + + G ++H Y KI G S G++LLT+Y++
Sbjct: 647 GFTM-DSFAISSILKAAALSDESSLGAQVHAYITKI--GLCTEPSVGSSLLTMYSK 699
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 2/233 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S+L C+ K +QLH ++ G + + LI +YA C+ + +A LF +L
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
N ++ +++ + G + + E VS F L ACA LA++ +
Sbjct: 411 SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM-DLGV 469
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V NS++DMY+KCGD++ A VF+EM DV SWN+++S Y +G
Sbjct: 470 QVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHG 529
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQ-IKDPNV 234
L ++A+ +L+ M+ C+P+ +T V+ GL+ + + FE I+D +
Sbjct: 530 LGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGI 582
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 150/343 (43%), Gaps = 42/343 (12%)
Query: 15 SLNQAK---QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTS 71
SL++A+ LH ++ G F LI Y+ C + SA ++F + ++ +
Sbjct: 158 SLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAG 217
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXX 131
I++ + +G ++ + MR G P+ Y F LKA L A +
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF-DFAKGVHGQILKT 276
Query: 132 XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVL 191
D RV +L +Y++ GD+ A +VF+EM + DV W+ M++ + NG AV++
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 192 ESMR--------------VDGC---------------------EPDVVTRNTVMDAYCRM 216
MR ++GC + D+ N ++D Y +
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 217 GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
+ A K+F ++ N +SW T+I GY ++G G + +FRE + + + + S
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV-TFSSA 455
Query: 277 LVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L +C L ++ G ++HG +K + + +L+ +YA+
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKV--AVSNSLIDMYAK 496
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 41/326 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++ L+A + + AK +H +L P L+Q+Y D+ A +F ++P
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACA--QLAALLEX 120
+ +V ++ ++A ++G + ++ + MR V P+ + +L CA + + L E
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ V N+++D+Y+KC ++ A ++F E+ ++ SWN+++ Y
Sbjct: 370 LHGLVVKVGFDL---DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYEN 426
Query: 181 NGLSQRA--------------VEVLESMRVDGCE---------------------PDVVT 205
G +A EV S + C V
Sbjct: 427 LGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAV 486
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
N+++D Y + G + A VF +++ +V SW LISGYS+ G +L I +++ D
Sbjct: 487 SNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL-DIMKDRD 545
Query: 266 VFPDAGALSGVLVSCRCLGALASGKE 291
P+ GVL C G + G+E
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQE 571
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 150/350 (42%), Gaps = 43/350 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L+ C AK +H +L GS F T L+ Y + A +LF ++P+
Sbjct: 54 AMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER 113
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N +F ++ ++ + I Y+ + +G + +VF LK L E
Sbjct: 114 NNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA-EICPWL 168
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V ++++ YS CG V+ A VF+ + +D+ W ++SCYV NG
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDA-------------------------------- 212
+ ++++L MR+ G P+ T +T + A
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 213 ---YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
Y ++G +S+A KVF ++ +V+ W+ +I+ + G ++ +F M + V P+
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFVVPN 347
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
LS +L C G+++HG +K+ Y S AL+ +YA+
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS--NALIDVYAK 395
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 6/249 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LLQ C K + K++H M + G + KL+ +YA DL++A LFR L +
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRD 173
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ + ++++ + + GL ++ + Y +MR + PD Y F V +AC+ L LE
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDR-LEHGKRAH 232
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ V ++++DMY KC RVFD++ R+V +W S++S Y +G
Sbjct: 233 AVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVS 292
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
++ E M+ +GC P+ VT V+ A GLV + + F +K +P + +
Sbjct: 293 EVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAM 352
Query: 241 ISGYSSVGR 249
+ GR
Sbjct: 353 VDTLGRAGR 361
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 37/191 (19%)
Query: 143 VLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD 202
+L +Y+ GD++ A +F ++ RD+ WN+M+S YV GL Q + + MR + PD
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 203 -----------------------------------VVTRNTVMDAYCRMGLVSEASKVFE 227
++ + ++D Y + S+ +VF+
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 228 QIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALA 287
Q+ NVI+WT+LISGY G+ L F +M +G P+ VL +C G +
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG-CRPNPVTFLVVLTACNHGGLVD 327
Query: 288 SGKEIHGYGLK 298
G E H Y +K
Sbjct: 328 KGWE-HFYSMK 337
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+ +ACSA L K+ H M+ + L+ +Y C H +F QL
Sbjct: 214 SVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR 273
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC 111
NV +TS+++ + HG + ++ + +M+ +G P+ F VL AC
Sbjct: 274 NVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 153/342 (44%), Gaps = 47/342 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDD--LRSAHSLFRQ 60
L SLL+ C K L KQ+ M+++G PF +++LI A + L + + +
Sbjct: 56 LLSLLEKC---KLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKG 112
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGV---SPDGYVFPKVLKACAQLAAL 117
+ PN+F++ + S ++ Y +M G PD + +P + K CA L L
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLR-L 171
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
V N+ + M++ CGD+E A +VFDE RD+ SWN +++
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTR------------------------------- 206
Y G +++A+ V + M +G +PD VT
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 207 ----NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVN 262
N +MD + + G + EA ++F+ ++ ++SWTT+ISGY+ G VS +F +M
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEE 351
Query: 263 DGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEI 304
+V +A + G + + R ALA +E+ K P EI
Sbjct: 352 KDVVLWNA-MIGGSVQAKRGQDALALFQEMQTSNTK--PDEI 390
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 139/334 (41%), Gaps = 41/334 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+ +CS LN+ K+ + Y+ +G L+ +++ C D+ A +F L +
Sbjct: 263 LVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT 322
Query: 66 VFAFTSILAFHSRHGL-------------------------------ARQCIETYAEMRF 94
+ ++T++++ ++R GL + + + EM+
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQT 382
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
PD L AC+QL AL + ++ + S++DMY+KCG++
Sbjct: 383 SNTKPDEITMIHCLSACSQLGAL-DVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNIS 441
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYC 214
A VF ++ R+ ++ +++ +G + A+ M G PD +T ++ A C
Sbjct: 442 EALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACC 501
Query: 215 RMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
G++ F Q+K +P + ++ ++ +GR G+ R M + M D
Sbjct: 502 HGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMV---DLLGRAGLLEEADRLMESMPME-AD 557
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGE 303
A +L CR G + G++ L++ P +
Sbjct: 558 AAVWGALLFGCRMHGNVELGEKAAKKLLELDPSD 591
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 168/388 (43%), Gaps = 76/388 (19%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ +L++ + KS +QAKQLH + S + +I IY + L A LF+ L
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLK 66
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
P V A+ S++ + L + + ++ EMR G PD VFP VLK+C + L
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL-RFGE 125
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSK-----------------------CGD------- 152
DL N++++MY+K GD
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 153 ------VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTR 206
++ RVF+ M +DV S+N++++ Y +G+ + A+ ++ M +PD T
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 207 NTVM-----------------------------------DAYCRMGLVSEASKVFEQIKD 231
++V+ D Y + + ++ +VF ++
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
+ ISW +L++GY GR+ +L +FR+MV V P A A S V+ +C L L GK+
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 292 IHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+HGY L+ G + +AL+ +Y++
Sbjct: 365 LHGYVLRGGFGSNIF--IASALVDMYSK 390
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 8/282 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S+L S + + K++H Y++ G + + L+ +YA + + +F +L
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ S++A + ++G + + + +M V P F V+ ACA LA L
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL-HLGK 363
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ + ++++DMYSKCG+++ A ++FD M D SW +++ + +G
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
AV + E M+ G +P+ V V+ A +GLV EA F + V +
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM--TKVYGLNQELE 481
Query: 243 GYSSV----GRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
Y++V GR G L ++ V P S +L SC
Sbjct: 482 HYAAVADLLGRAG-KLEEAYNFISKMCVEPTGSVWSTLLSSC 522
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 149/353 (42%), Gaps = 39/353 (11%)
Query: 3 LNSLLQAC-SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L LL+ C + SL++ ++LH +L G + KL Y DL A +F ++
Sbjct: 87 LKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEM 146
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P+ +F + ++ + L + + M + V+P+ F VL+AC + +
Sbjct: 147 PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV 206
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
VCN ++D+YS+ G V+ A RVFD +R +D SW +M+S N
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 182 GLSQRAVEVLESMRVDGCEP-----------------------------------DVVTR 206
A+ + M V G P D
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
N ++ Y +G + A +F + + +++ TLI+G S G ++ +F+ M DG+
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
PD+ L+ ++V+C G L G+++H Y K+ G ALL LYA+
Sbjct: 387 -PDSNTLASLVVACSADGTLFRGQQLHAYTTKL--GFASNNKIEGALLNLYAK 436
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 151/353 (42%), Gaps = 41/353 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+S+L AC +SL +QLH +L G + L+ +Y +L SA +F +
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
Q + + +++ S+ G + +E + M G+ PD ++ AC+ L
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ ++ ++L++Y+KC D+E A F E +V WN M+ Y
Sbjct: 411 LHAYTTKLGFASNN-KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVM-------------------------------- 210
+ + + M+++ P+ T +++
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 211 ---DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
D Y ++G + A + + +V+SWTT+I+GY+ +L FR+M++ G+
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYG-LKIMPGEIFYRSAGAALLTLYAR 319
+ G L+ + +C L AL G++IH + ++ +++ AL+TLY+R
Sbjct: 590 DEVG-LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN---ALVTLYSR 638
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 142/352 (40%), Gaps = 39/352 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L SL+ ACSA +L + +QLH Y G L+ +YA C D+ +A F +
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE 451
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV + +L + R + +M+ + + P+ Y +P +LK C +L LE
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD-LELGE 510
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ VC+ ++DMY+K G ++ A + +DV SW +M++ Y
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 183 LSQRAVEVLESMR-----------------------------------VDGCEPDVVTRN 207
+A+ M V G D+ +N
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++ Y R G + E+ FEQ + + I+W L+SG+ G + +L +F M +G+
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ S V + + GK++H K G AL+++YA+
Sbjct: 691 NNFTFGSAVKAASET-ANMKQGKQVHAVITK--TGYDSETEVCNALISMYAK 739
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 142/320 (44%), Gaps = 37/320 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+ C L +Q+H ++ + + LI +YA L +A + +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++T+++A ++++ + + T+ +M +G+ D + ACA L AL E
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE-GQQI 613
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
DL N+++ +YS+CG +E + F++ D +WN+++S + +G +
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 185 QRAVEVLESMRVDGCEPD-------------------------VVTR----------NTV 209
+ A+ V M +G + + V+T+ N +
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+ Y + G +S+A K F ++ N +SW +I+ YS G +L F +M++ V P+
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN-VRPN 792
Query: 270 AGALSGVLVSCRCLGALASG 289
L GVL +C +G + G
Sbjct: 793 HVTLVGVLSACSHIGLVDKG 812
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 142/322 (44%), Gaps = 15/322 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L + + AC+ ++L + +Q+H + G F L+ +Y+ C + ++ F Q
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ A+ ++++ + G + + + M +G+ + + F +KA ++ A + +
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM-KQGK 712
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ VCN+++ MY+KCG + A + F E+ ++ SWN++++ Y +G
Sbjct: 713 QVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHG 772
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISW 237
A++ + M P+ VT V+ A +GLV + FE + P +
Sbjct: 773 FGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHY 832
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
++ + G L +E + + + PDA +L +C + G+ + L
Sbjct: 833 VCVVDMLTRAGL----LSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 888
Query: 298 KIMPGEIFYRSAGAALLT-LYA 318
++ P + SA LL+ LYA
Sbjct: 889 ELEPED----SATYVLLSNLYA 906
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 142/321 (44%), Gaps = 44/321 (13%)
Query: 13 SKSLNQA--KQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFT 70
S+S N A LH L G F L+ Y ++ +A LF ++ +PNV ++T
Sbjct: 40 SESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWT 99
Query: 71 SILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXX 129
S+++ ++ G + + + +M + V P+ Y F V KAC+ LA
Sbjct: 100 SVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAE-SRIGKNIHARLE 158
Query: 130 XXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM--RERDVFSWNSMMSCYVCNGLSQRA 187
++ V +S++DMY KC DVE A RVFD M R+V SW SM++ Y N A
Sbjct: 159 ISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEA 218
Query: 188 VEVLESMRV-------------------------------------DGCEPDVVTRNTVM 210
+E+ S G E + V +++
Sbjct: 219 IELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLL 278
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G +S A K+F +I+ +VIS+T++I + G ++ +F EMV G + P+
Sbjct: 279 DMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV-AGRINPNY 337
Query: 271 GALSGVLVSCRCLGALASGKE 291
L GVL +C G + G E
Sbjct: 338 VTLLGVLHACSHSGLVNEGLE 358
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ- 63
S+ +ACSA K +H + + G R ++ L+ +Y C+D+ +A +F +
Sbjct: 136 SVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGY 195
Query: 64 -PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS--PDGYVFPKVLKACAQLAALLEX 120
NV ++TS++ ++++ + IE + S + ++ V+ AC+ L L +
Sbjct: 196 GRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRL-QW 254
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ V S+LDMY+KCG + A ++F +R V S+ SM+
Sbjct: 255 GKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAK 314
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVI 235
+GL + AV++ + M P+ VT V+ A GLV+E + + + P+
Sbjct: 315 HGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSR 374
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
+T ++ GR + + + + + GA G L+ GAL S +HG
Sbjct: 375 HYTCVVDMLGRFGRVDEAYELAKTI--------EVGAEQGALL----WGALLSAGRLHG 421
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 57/97 (58%)
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIF 257
G D T N ++ +Y ++ ++ A K+F+++ +PNV+SWT++ISGY+ +G+ +L +F
Sbjct: 59 GFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMF 118
Query: 258 REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
++M D V P+ + V +C L GK IH
Sbjct: 119 QKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHA 155
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S++ ACS+ L K H + G T L+ +YA C L A +F ++
Sbjct: 239 LASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIR 298
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V ++TS++ ++HGL ++ + EM ++P+ VL AC+ + E
Sbjct: 299 CHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLE 358
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA---ARVFDEMRERDVFSWNSMMS 176
D R V+DM + G V+ A A+ + E+ W +++S
Sbjct: 359 YLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLS 415
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 150/361 (41%), Gaps = 76/361 (21%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRS----AHSLFRQ 60
S+L C K+ +Q KQLH + G P F KL + C L A+ LF +
Sbjct: 39 SILGVC---KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFW--CSRLGGHVSYAYKLFVK 93
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+P+P+V + +++ S+ + + Y M +GV+PD + FP +L + L
Sbjct: 94 IPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC 153
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+L V N+++ MYS CG ++ A VFD + DVFSWN M+S Y
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 181 NGLSQRAVEVLESMR---------------------------------VDGC--EPDVVT 205
+ ++E+L M V C EP +
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRL 273
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG----------------- 248
N +++AY G + A ++F +K +VISWT+++ GY G
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR 333
Query: 249 -----------RHGV---SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
R G SL IFREM + GM+ PD + VL +C LG+L G+ I
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLEIGEWIKT 392
Query: 295 Y 295
Y
Sbjct: 393 Y 393
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 129/262 (49%), Gaps = 10/262 (3%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+L+ A +A ++ A ++ M R T +++ Y + +L+ A + F Q+P
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSM----KARDVISWTSIVKGYVERGNLKLARTYFDQMPV 330
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++T ++ + R G + +E + EM+ G+ PD + VL ACA L +L E
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL-EIGEW 389
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V N+++DMY KCG E A +VF +M +RD F+W +M+ NG
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
Q A++V M+ +PD +T V+ A G+V +A K F +++ +P+++ +
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 239 TLISGYSSVGRHGVSLGIFREM 260
++ G + I R+M
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKM 531
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 198 GCEPDVVTRNTVMDAYCRM--GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLG 255
G P+ + + +C G VS A K+F +I +P+V+ W +I G+S V G +
Sbjct: 61 GVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVR 120
Query: 256 IFREMVNDGMVFPDAGALSGVLVSC-RCLGALASGKEIHGYGLKIMPGEIFYRSAGAALL 314
++ M+ +G V PD+ +L R GALA GK++H + +K G Y AL+
Sbjct: 121 LYLNMLKEG-VTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLY--VQNALV 177
Query: 315 TLYA 318
+Y+
Sbjct: 178 KMYS 181
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 154/326 (47%), Gaps = 24/326 (7%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAH----SL 57
H SL+ AC + SL + +H +L R+ ++++ C L + S+
Sbjct: 31 HFISLIHACKDTASL---RHVHAQIL-----RRGVLSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 58 FRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
FR + N F +++ + + + + M GV PD FP VLK+ ++L
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL-GF 141
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE----MRERDVFSWNS 173
D V S++DMY+K G ++ A +VF+E +++ + WN
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
+++ Y A + SM E + + +T++ Y G ++ A ++FE + + N
Sbjct: 202 LINGYCRAKDMHMATTLFRSM----PERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKN 257
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
V+SWTTLI+G+S G + ++ + EM+ G+ P+ ++ VL +C GAL SG IH
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFEMLEKGLK-PNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 294 GYGLKIMPGEIFYRSAGAALLTLYAR 319
GY L G R+ G AL+ +YA+
Sbjct: 317 GYILD--NGIKLDRAIGTALVDMYAK 340
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 124/271 (45%), Gaps = 12/271 (4%)
Query: 18 QAKQLHHYMLLHGS--HRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
+AK +H L S R + LI+ Y D +L A LF +P+ NV ++T+++
Sbjct: 208 RAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLING 267
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXX 135
S+ G I TY EM KG+ P+ Y VL AC++ AL
Sbjct: 268 FSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGAL-GSGIRIHGYILDNGIKL 326
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D + +++DMY+KCG+++ AA VF M +D+ SW +M+ + +G +A++ M
Sbjct: 327 DRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMM 386
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRH 250
G +PD V V+ A V F+ ++ +P + + ++ +GR
Sbjct: 387 YSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVV---DLLGRA 443
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
G L E+V + + PD + + +C+
Sbjct: 444 G-KLNEAHELVENMPINPDLTTWAALYRACK 473
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L ACS S +L ++H Y+L +G T L+ +YA C +L A ++F +
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK 357
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC 111
++ ++T+++ + HG Q I+ + +M + G PD VF VL AC
Sbjct: 358 DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 155/360 (43%), Gaps = 73/360 (20%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYA--DCDDLRSAHSLFRQLP 62
SL++ C SL Q KQ H +M+ G+ P+ +KL + A L A +F ++P
Sbjct: 35 SLIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXX 121
+PN FA+ +++ ++ I + +M + P+ Y FP ++KA A++++L
Sbjct: 92 KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL-SLG 150
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D+ V NS++ Y CGD++ A +VF ++E+DV SWNSM++ +V
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 182 GLSQRAVEVLESMRVDGCEPDVVT-----------------------------------R 206
G +A+E+ + M + + VT
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT--------------------------- 239
N ++D Y + G + +A ++F+ +++ + ++WTT
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 240 ----LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
LIS Y G+ +L +F E+ + + L L +C +GAL G+ IH Y
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 6/228 (2%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N++L + S+ AK+L M + T ++ YA +D +A + +PQ
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAM----EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRF-KGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ A+ ++++ + ++G + + + E++ K + + L ACAQ+ AL E
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL-ELGR 385
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V ++++ MYSKCGD+E + VF+ + +RDVF W++M+ +G
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
AV++ M+ +P+ VT V A GLV EA +F Q++
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 73/161 (45%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S L AC+ +L + +H Y+ HG T+ LI +Y+ C DL + +F +
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +VF +++++ + HG + ++ + +M+ V P+G F V AC+ + E
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ + ++D+ + G +E A + + M
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
+P ++ M A + A KVF++I PN +W TLI Y+S +S+ F +
Sbjct: 61 DPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLD 120
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
MV++ +P+ ++ + + +L+ G+ +HG +K
Sbjct: 121 MVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK 159
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 147/348 (42%), Gaps = 37/348 (10%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP- 64
LL+ S SL KQ+ ++ R K++ D S S+ +
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 65 -NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ F++ ++L+ ++ R I Y G SPD + FP V KAC + + + E
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIRE-GKQ 127
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V NS++ Y CG+ A +VF EM RDV SW +++ + GL
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGL 187
Query: 184 SQRAVEVLESMRVD----------------GCEP----------------DVVTRNTVMD 211
+ A++ M V+ GC + T N ++D
Sbjct: 188 YKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + +S+A +VF +++ + +SW ++ISG R ++ +F M + PD
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L+ VL +C LGA+ G+ +H Y L G + G A++ +YA+
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILT--AGIKWDTHIGTAIVDMYAK 353
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 138/321 (42%), Gaps = 41/321 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+ +AC + + KQ+H + G + + L+ Y C + R+A +F ++P +
Sbjct: 112 VFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRD 171
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++T I+ +R GL ++ ++T+++M V P+ + VL + ++ L
Sbjct: 172 VVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGC-LSLGKGIH 227
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
L N+++DMY KC + A RVF E+ ++D SWNSM+S V S+
Sbjct: 228 GLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSK 287
Query: 186 RAVEVLESMRV-DGCEPD--VVTR---------------------------------NTV 209
A+++ M+ G +PD ++T +
Sbjct: 288 EAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAI 347
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + G + A ++F I+ NV +W L+ G + G SL F EMV G P+
Sbjct: 348 VDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK-PN 406
Query: 270 AGALSGVLVSCRCLGALASGK 290
L +C G + G+
Sbjct: 407 LVTFLAALNACCHTGLVDEGR 427
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 130/278 (46%), Gaps = 12/278 (4%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L+ K +H +L S LI +Y C+ L A +F +L + + ++ S+++
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 76 HSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXX 134
+++ I+ ++ M+ G+ PDG++ VL ACA L A+ +
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAV-DHGRWVHEYILTAGIK 338
Query: 135 XDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM 194
D + +++DMY+KCG +E A +F+ +R ++VF+WN+++ +G ++ E M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 195 RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD------PNVISWTTLISGYSSVG 248
G +P++VT ++A C GLV E + F ++K P + + +I G
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 249 RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
+L E+V V PD +L +C+ G L
Sbjct: 459 LLDEAL----ELVKAMPVKPDVRICGAILSACKNRGTL 492
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L AC++ +++ + +H Y+L G T ++ +YA C + +A +F +
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC 111
NVF + ++L + HG + + + EM G P+ F L AC
Sbjct: 369 SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNAC 417
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 141/318 (44%), Gaps = 10/318 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L Q + + +H ++L KL++ YA D+ SA +F ++P+ N
Sbjct: 45 LGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN 104
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++ + +G + ++ + M V PD Y FP VLKAC+ + +
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS-CSGTIVIGRKIH 163
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
L V N ++ MY KCG + A V DEM RDV SWNS++ Y N
Sbjct: 164 GSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFD 223
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL--VSEASKVFEQIKDPNVISWTTLISG 243
A+EV M D T +++ A V +F ++ +++SW +I
Sbjct: 224 DALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGV 283
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY--GLKIMP 301
Y ++ ++ M DG PDA +++ VL +C AL+ GK+IHGY K++P
Sbjct: 284 YMKNAMPVEAVELYSRMEADGFE-PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 342
Query: 302 GEIFYRSAGAALLTLYAR 319
+ AL+ +YA+
Sbjct: 343 NLLLEN----ALIDMYAK 356
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 9/241 (3%)
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAA 116
+F ++ + ++ ++ ++ + ++ + + +E Y+ M G PD VL AC +A
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 117 LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS 176
L +L + N+++DMY+KCG +E A VF+ M+ RDV SW +M+S
Sbjct: 325 L-SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS 236
Y +G AV + ++ G PD + T + A GL+ E F+ + D I+
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 237 --WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC-----LGALASG 289
L +GR G +R + D + P+ +L +CR +G LA+
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYR-FIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 290 K 290
K
Sbjct: 503 K 503
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 1/174 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ S+L AC + +L+ K++H Y+ LI +YA C L A +F +
Sbjct: 312 ITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK 371
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V ++T++++ + G + +++++ G+ PD F L AC+ L E
Sbjct: 372 SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRS 431
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMM 175
L ++D+ + G V+ A R +M E + W +++
Sbjct: 432 CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 169/357 (47%), Gaps = 49/357 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSH--RKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++ A S S+S+ +A + ML G + F + I +YA+ D+ S+ +F
Sbjct: 219 NVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCV 278
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAE-MRFKGVSPDGYVFPKVLKACAQLAAL--LE 119
+ N+ + +++ + ++ + IE + E + K + D + L A + ++AL +E
Sbjct: 279 ERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTY---LLAASAVSALQQVE 335
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
+ + NS++ MYS+CG V + VF MRERDV SWN+M+S +V
Sbjct: 336 LGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFV 395
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVT-----------RNT-------------------- 208
NGL + ++ M+ G + D +T RN
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM 455
Query: 209 ---VMDAYCRMGLVSEASKVFE--QIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
++D Y + GL+ + K+FE + + +W ++ISGY+ G + +FR+M+
Sbjct: 456 NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQ 515
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK-IMPGEIFYRSAGAALLTLYAR 319
+ P+A ++ +L +C +G++ GK++HG+ ++ + +F +AL+ +Y++
Sbjct: 516 N-IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVF---VASALVDMYSK 568
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 146/310 (47%), Gaps = 12/310 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ-- 60
+ +LL A S ++ KQ H +++ G + + LI +Y+ +R + LF
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSGLIRISQKLFEGSG 480
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ + + S+++ ++++G + + +M + + P+ +L AC+Q+ ++ +
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSV-DL 539
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
++ V ++++DMYSK G ++ A +F + +ER+ ++ +M+ Y
Sbjct: 540 GKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQ 599
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVI 235
+G+ +RA+ + SM+ G +PD +T V+ A GL+ E K+FE++++ P+
Sbjct: 600 HGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSE 659
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+ + VGR + + + +G + G+L G SC+ G L + +
Sbjct: 660 HYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLG---SCKLHGELELAETVSER 716
Query: 296 GLKIMPGEIF 305
K G+ F
Sbjct: 717 LAKFDKGKNF 726
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 119/310 (38%), Gaps = 51/310 (16%)
Query: 33 RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM 92
+ P ++L +I D + + A LF +P+P + +I+ + L + + Y+
Sbjct: 38 QTPSIRSRLSKICQDGNP-QLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYS-- 94
Query: 93 RFKGVSP----DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMY- 147
R K +P D Y + LKACA+ L + V NS+++MY
Sbjct: 95 RMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRV-VHNSLMNMYV 153
Query: 148 -----SKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRA--------------- 187
C + + +VFD MR ++V +WN+++S YV G + A
Sbjct: 154 SCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPS 213
Query: 188 ----VEVLESMRV------------------DGCEPDVVTRNTVMDAYCRMGLVSEASKV 225
V V ++ + D D+ ++ + Y +G + + +V
Sbjct: 214 PVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRV 273
Query: 226 FEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGA 285
F+ + N+ W T+I Y S+ +F E + + D + L
Sbjct: 274 FDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQ 333
Query: 286 LASGKEIHGY 295
+ G++ HG+
Sbjct: 334 VELGRQFHGF 343
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 148/324 (45%), Gaps = 37/324 (11%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
++L++AC KS+ K+++ +M+ +G + + +++ ++ C + A LF ++P+
Sbjct: 127 DALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPE 186
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N++++ SI++ G + E + M + + + F +L+A A L ++
Sbjct: 187 RNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQL 246
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
C ++DMYSKCGD+E A F+ M E+ +WN++++ Y +G
Sbjct: 247 HVCALKLGVVDNTFVSC-GLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGY 305
Query: 184 SQRAVEVLESMR-----------------------------------VDGCEPDVVTRNT 208
S+ A+ +L MR +G E ++V
Sbjct: 306 SEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTA 365
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D Y + G V A VF+++ N+ISW L+ GY++ GR ++ +F +M+ V P
Sbjct: 366 LVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAAN-VAP 424
Query: 269 DAGALSGVLVSCRCLGALASGKEI 292
+ VL +C G G EI
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEI 448
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+A + S+ KQLH L G F + LI +Y+ C D+ A F +P+
Sbjct: 230 MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKT 289
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
A+ +++A ++ HG + + + +MR GVS D + +++ +LA LE
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAK-LELTKQAH 348
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ +++D YSK G V+ A VFD++ +++ SWN++M Y +G
Sbjct: 349 ASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGT 408
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
AV++ E M P+ VT V+ A GL + ++F
Sbjct: 409 DAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIF 449
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ +++ + L KQ H ++ +G + T L+ Y+ + +A +F +LP
Sbjct: 328 LSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP 387
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACA 112
+ N+ ++ +++ ++ HG ++ + +M V+P+ F VL ACA
Sbjct: 388 RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 36/300 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+ACS K+L +Q+H ++ F T L+ +YA C ++ +F +
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N +TSI+A H+R G + I + M+ + + + +L+AC + ALL
Sbjct: 349 NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL-LGKEL 407
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
++ + ++++ +Y KCG+ A V ++ RDV SW +M+S G
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDA-------------------------------- 212
A++ L+ M +G EP+ T ++ + A
Sbjct: 468 SEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSAL 527
Query: 213 ---YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
Y + G VSEA +VF+ + + N++SW +I GY+ G +L + M +G D
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 110/206 (53%), Gaps = 1/206 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC + +L K+LH ++ + + + + L+ +Y C + R A ++ +QLP
Sbjct: 390 SILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR 449
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++T++++ S G + ++ EM +GV P+ + + LKACA +LL
Sbjct: 450 DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLL-IGRSI 508
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
++ V ++++ MY+KCG V A RVFD M E+++ SW +M+ Y NG
Sbjct: 509 HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFC 568
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVM 210
+ A++++ M +G E D T++
Sbjct: 569 REALKLMYRMEAEGFEVDDYIFATIL 594
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 152/352 (43%), Gaps = 45/352 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L + +S + K++H L + +F LI DL A +F +P+ N
Sbjct: 88 LAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKN 147
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLAALLEXXXXX 124
+T+++ + ++GL + + + G+ + +F +L C++ A
Sbjct: 148 TVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEF--ELGRQ 205
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS-------- 176
+L V +S++ Y++CG++ A R FD M E+DV SW +++S
Sbjct: 206 VHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHG 265
Query: 177 ----------------------CYVCNGLSQ-------RAVEVLESMRVDGCEPDVVTRN 207
C + S+ R V L R+ + DV
Sbjct: 266 IKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM--IKTDVFVGT 323
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++MD Y + G +S+ KVF+ + + N ++WT++I+ ++ G ++ +FR M ++
Sbjct: 324 SLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIA 383
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ +S +L +C +GAL GKE+H +K + Y G+ L+ LY +
Sbjct: 384 NNLTVVS-ILRACGSVGALLLGKELHAQIIKNSIEKNVY--IGSTLVWLYCK 432
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 58/111 (52%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+S L+AC+ S+SL + +H + + F + LI +YA C + A +F +P+
Sbjct: 490 SSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE 549
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL 114
N+ ++ +++ ++R+G R+ ++ M +G D Y+F +L C +
Sbjct: 550 KNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 164/417 (39%), Gaps = 105/417 (25%)
Query: 6 LLQACSASK-SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
LL +C SK S + +H ++ G + F +LI Y+ C L +F ++PQ
Sbjct: 25 LLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR 84
Query: 65 NVFAFTSILA--------------FHS-----------------RHGLARQCIETYAEMR 93
N++ + S++ F S +H + + +A M
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 94 FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
+G + Y F VL AC+ L + D+ + ++++DMYSKCG+V
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDM-NKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNV 203
Query: 154 EGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT-------- 205
A RVFDEM +R+V SWNS+++C+ NG + A++V + M EPD VT
Sbjct: 204 NDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISAC 263
Query: 206 ----------------------------RNTVMDAYCRMGLVSEASKVFE---------- 227
N +D Y + + EA +F+
Sbjct: 264 ASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAE 323
Query: 228 ---------------------QIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
++ + NV+SW LI+GY+ G + +L +F + + V
Sbjct: 324 TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES-V 382
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIH----GYGLKIMPGEIFYRSAGAALLTLYAR 319
P + + +L +C L L G + H +G K GE G +L+ +Y +
Sbjct: 383 CPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 148/358 (41%), Gaps = 73/358 (20%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L ACS +N+ Q+H + + + L+ +Y+ C ++ A +F ++
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++ S++ ++G A + ++ + M V PD V+ ACA L+A+
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD----------------------- 161
D+ + N+ +DMY+KC ++ A +FD
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 162 --------EMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD---------------- 197
+M ER+V SWN++++ Y NG ++ A+ + ++ +
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 198 -------------------------GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP 232
G E D+ N+++D Y + G V E VF ++ +
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 233 NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+ +SW +I G++ G +L +FREM+ G PD + GVL +C G + G+
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEK-PDHITMIGVLSACGHAGFVEEGR 513
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 127/279 (45%), Gaps = 14/279 (5%)
Query: 33 RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM 92
R T +I YA ++A +F ++ + NV ++ +++A ++++G + + + +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 93 RFKGVSPDGYVFPKVLKACAQLAAL-----LEXXXXXXXXXXXXXXXXDLRVCNSVLDMY 147
+ + V P Y F +LKACA LA L D+ V NS++DMY
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 148 SKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRN 207
KCG VE VF +M ERD SWN+M+ + NG A+E+ M G +PD +T
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
Query: 208 TVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVN 262
V+ A G V E F + P +T ++ +GR G L + M+
Sbjct: 498 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV---DLLGRAGF-LEEAKSMIE 553
Query: 263 DGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
+ + PD+ +L +C+ + GK + L++ P
Sbjct: 554 EMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEP 592
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 13/182 (7%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHG------SHRKPFFTTKLIQIYADCDDLRSAHSLF 58
++L+AC+ L+ Q H ++L HG F LI +Y C + + +F
Sbjct: 391 NILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450
Query: 59 RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
R++ + + ++ +++ +++G + +E + EM G PD VL AC A +
Sbjct: 451 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGH-AGFV 509
Query: 119 EXXXXXXXXXXXXXXXXDLR---VCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSM 174
E LR C ++D+ + G +E A + +EM + D W S+
Sbjct: 510 EEGRHYFSSMTRDFGVAPLRDHYTC--MVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 567
Query: 175 MS 176
++
Sbjct: 568 LA 569
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 152/351 (43%), Gaps = 75/351 (21%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHR-KPFFTTKLIQIYADCDD----------- 50
L SLLQ C +KSL Q K +H ++ + G R + LI +Y C
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 51 -LRSAHS-------------------LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYA 90
LR+ +S +F +P+ +V ++ +++ +++ G + + Y
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 91 EMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
E R G+ + + F +L AC + + L+ ++ + S++D Y+KC
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVK-SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
G +E A R FDEM +D+ W +++S
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLIS---------------------------------- 253
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
Y ++G + A K+F ++ + N +SWT LI+GY G +L +FR+M+ G V P+
Sbjct: 254 -GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG-VKPEQ 311
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLK--IMPGEIFYRSAGAALLTLYAR 319
S L + + +L GKEIHGY ++ + P I S L+ +Y++
Sbjct: 312 FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS----LIDMYSK 358
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 17/304 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ A + + AK+ M + H T LI YA D+ +A LF ++P+
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIH----IWTTLISGYAKLGDMEAAEKLFCEMPEK 274
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N ++T+++A + R G + ++ + +M GV P+ + F L A A +A+L
Sbjct: 275 NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIH 334
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNGL 183
+ V +S++DMYSK G +E + RVF ++ D WN+M+S +GL
Sbjct: 335 GYMIRTNVRPNAI-VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGL 393
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
+A+ +L+ M +P+ T +++A GLV E + FE + P+ +
Sbjct: 394 GHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYA 453
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVF-PDAGALSGVLVSCRCLGALASGKEIHGYGL 297
LI +GR G + R++ + M F PD + +L CR G GK+ +
Sbjct: 454 CLI---DLLGRAGCFKELMRKI--EEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELI 508
Query: 298 KIMP 301
K+ P
Sbjct: 509 KLDP 512
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 7/217 (3%)
Query: 71 SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
S L+ H+ Q + + +G+ + +L+ C +L +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV 190
+ + N ++ MY KCG A +VFD+M R+++SWN+M+S YV +G+ RA V
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 191 LESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRH 250
+SM E DVV+ NT++ Y + G + EA +++ + + +G +
Sbjct: 136 FDSMP----ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALA 287
L + R+ +V AG LS V++SC + A A
Sbjct: 192 SRQLQLNRQAHGQVLV---AGFLSNVVLSCSIIDAYA 225
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 146/330 (44%), Gaps = 44/330 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L+AC +++ ++H L G + LI +Y+ + +A LF ++P
Sbjct: 158 SVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR 214
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++ ++++ + + G A++ + +R + D +L AC + A
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTE-AGDFNRGVTI 269
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+L V N ++D+Y++ G + +VFD M RD+ SWNS++ Y N
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 185 QRAVEVLESMRVDGCEPDVVTR------------------------------------NT 208
RA+ + + MR+ +PD +T N
Sbjct: 330 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
V+ Y ++GLV A VF + + +VISW T+ISGY+ G ++ ++ M +G +
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+ G VL +C GAL G ++HG LK
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 134/272 (49%), Gaps = 11/272 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSP 99
++ +YA + SA ++F LP +V ++ +I++ ++++G A + IE Y M +G ++
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
+ + VL AC+Q AL + D+ V S+ DMY KCG +E A +
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL-DVFVVTSLADMYGKCGRLEDALSL 508
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
F ++ + WN++++C+ +G ++AV + + M +G +PD +T T++ A GLV
Sbjct: 509 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLV 568
Query: 220 SEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
E FE ++ P++ + ++ Y G+ +L + M + PDA
Sbjct: 569 DEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM----SLQPDASIWG 624
Query: 275 GVLVSCRCLGALASGKEIHGYGLKIMPGEIFY 306
+L +CR G + GK + ++ P + Y
Sbjct: 625 ALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 656
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 155/350 (44%), Gaps = 43/350 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+++L + C+ +L AK LH +++ + + KL+ +Y ++ A F +
Sbjct: 57 VHTLFRYCT---NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ 113
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAE-MRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+V+A+ +++ + R G + + I ++ M G++PD FP VLKAC +
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI----DG 169
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D+ V S++ +YS+ V A +FDEM RD+ SWN+M+S Y +
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 182 GLSQRAVEVLESMRV-------------------------------DGCEPDVVTRNTVM 210
G ++ A+ + +R G E ++ N ++
Sbjct: 230 GNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y G + + KVF+++ ++ISW ++I Y + ++ +F+EM + PD
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDC 348
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYR-SAGAALLTLYAR 319
L + LG + + + + G+ L+ G + G A++ +YA+
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLR--KGWFLEDITIGNAVVVMYAK 396
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L ACS + +L Q +LH +L +G + F T L +Y C L A SLF Q+P+
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV 515
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N + +++A H HG + + + EM +GV PD F +L AC+ + E
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF 575
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMS 176
L+ ++DMY + G +E A + M + D W +++S
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLS 628
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 151/362 (41%), Gaps = 71/362 (19%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGS-HRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ L AS L++ KQ+H ++++ G + L++ Y + + A +F ++P
Sbjct: 134 QTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEXX 121
P+V +F ++ +++ G + + ++ Y +M G+ PD Y +L C L+ + L
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKG 253
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKC------------------------------- 150
+L + N++LDMY KC
Sbjct: 254 VHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRL 313
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVL--ESMRVDGCEPDVVT--- 205
GD+E A VFD+M +RD+ SWNS++ Y G QR V L E V+ +PD VT
Sbjct: 314 GDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVS 373
Query: 206 --------------------------------RNTVMDAYCRMGLVSEASKVFEQIKDPN 233
+ ++D YC+ G++ A VF+ + +
Sbjct: 374 LISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKD 433
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
V WT++I+G + G +L +F M +G V P+ L VL +C G + G +
Sbjct: 434 VALWTSMITGLAFHGNGQQALQLFGRMQEEG-VTPNNVTLLAVLTACSHSGLVEEGLHVF 492
Query: 294 GY 295
+
Sbjct: 493 NH 494
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 13/240 (5%)
Query: 50 DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCI-ETYAEMRF-KGVSPDGYVFPKV 107
D+ +A ++F Q+P+ ++ ++ S+L +S+ G ++ + E + EM + V PD +
Sbjct: 315 DMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSL 374
Query: 108 LKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD 167
+ A L D + ++++DMY KCG +E A VF E+D
Sbjct: 375 ISGAANNGEL-SHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKD 433
Query: 168 VFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFE 227
V W SM++ +G Q+A+++ M+ +G P+ VT V+ A GLV E VF
Sbjct: 434 VALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFN 493
Query: 228 QIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF-PDAGALSGVLVSCR 281
+K DP + +L+ GR + +++V M P +L +CR
Sbjct: 494 HMKDKFGFDPETEHYGSLVDLLCRAGRVEEA----KDIVQKKMPMRPSQSMWGSILSACR 549
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 120/301 (39%), Gaps = 48/301 (15%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC--DDLRSAHSLFRQL-P 62
LL+ C+ S NQ KQ+ ++ F ++LI A ++L A LF P
Sbjct: 40 LLENCN---SRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTP 96
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
PNVF + ++++ S +C Y+ M VSPD F ++KA + L+ E
Sbjct: 97 NPNVFVYNTMISAVSSS--KNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLS---EVKQ 151
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ NS++ Y + G+ A +VF M DV S+N M+ Y G
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG 211
Query: 183 LSQRAVEVLESMRVDGCEPD-------------------------------------VVT 205
S A+++ M DG EPD ++
Sbjct: 212 FSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLIL 271
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
N ++D Y + A + F+ +K ++ SW T++ G+ +G + +F +M +
Sbjct: 272 SNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDL 331
Query: 266 V 266
V
Sbjct: 332 V 332
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 102/247 (41%), Gaps = 11/247 (4%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SL+ + + L+ + +H ++ F ++ LI +Y C + A +F+ +
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK 432
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V +TS++ + HG +Q ++ + M+ +GV+P+ VL AC+ + E
Sbjct: 433 DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVF 492
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDE---MRERDVFSWNSMMSCYVCN 181
+ S++D+ + G VE A + + MR W S++S C
Sbjct: 493 NHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSM-WGSILSA--CR 549
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
G L + EP+ ++ + Y +G + K E +++ V
Sbjct: 550 GGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKK---- 605
Query: 241 ISGYSSV 247
+GYSSV
Sbjct: 606 TAGYSSV 612
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 160/346 (46%), Gaps = 50/346 (14%)
Query: 17 NQAKQLHHYMLLHGSHRKPFFTTKL------IQIYADCDDLRSAHSLFRQLPQPNVFAFT 70
N KQL +L+HG+ F + L I +Y D++ A LF ++ + +V ++T
Sbjct: 26 NVKKQL---LLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWT 82
Query: 71 SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
++++ SR G + + EM + V + + + VLK+C L L E
Sbjct: 83 AMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKG 142
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV 190
+L V +++L +Y++CG +E A FD M+ERD+ SWN+M+ Y N + + +
Sbjct: 143 NCAG-NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSL 201
Query: 191 LESMRVDGCEPDVVTRNTVM-----------------------------------DAYCR 215
+ M +G +PD T +++ +AY +
Sbjct: 202 FQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVK 261
Query: 216 MGLVSEASKVFEQIKDPNVISWTTLISGYSSVGR-HGVSLGIFREMVNDGMVFPDAGALS 274
G ++ A K+ E K +++S T LI+G+S + IF++M+ D +S
Sbjct: 262 CGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM-DEVVVS 320
Query: 275 GVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSA-GAALLTLYAR 319
+L C + ++ G++IHG+ LK +I + A G +L+ +YA+
Sbjct: 321 SMLKICTTIASVTIGRQIHGFALK--SSQIRFDVALGNSLIDMYAK 364
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 1/232 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+A K L +LH + G R L+ Y C L +A L +
Sbjct: 219 SLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR 278
Query: 65 NVFAFTSILA-FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
++ + T+++ F ++ + + +M D V +LK C +A++
Sbjct: 279 DLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQI 338
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ + NS++DMY+K G++E A F+EM+E+DV SW S+++ Y +G
Sbjct: 339 HGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGN 398
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
++A+++ M + +P+ VT +++ A G K+++ + + + I
Sbjct: 399 FEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI 450
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 138/329 (41%), Gaps = 45/329 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L++C L + Q+H + + L+ +YA C + A F + +
Sbjct: 118 SVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKER 177
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++ +++ ++ + A + M +G PD + F +L+A + + LE
Sbjct: 178 DLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA-SIVVKCLEIVSEL 236
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC-NGL 183
+ S+++ Y KCG + A ++ + ++RD+ S ++++ + N
Sbjct: 237 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 296
Query: 184 SQRAVEVLESM------------------------------------RVDGCEPDVVTRN 207
+ A ++ + M + DV N
Sbjct: 297 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 356
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHG---VSLGIFREMVNDG 264
+++D Y + G + +A FE++K+ +V SWT+LI+GY GRHG ++ ++ M ++
Sbjct: 357 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGY---GRHGNFEKAIDLYNRMEHER 413
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIH 293
+ D LS +L +C G G +I+
Sbjct: 414 IKPNDVTFLS-LLSACSHTGQTELGWKIY 441
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 116/249 (46%), Gaps = 6/249 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L ACS L + KQLH ++L G R F TT L+ +YA L A F L + +
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V +TS+++ + ++ + + Y M+ G+ P+ VLKAC+ LA LE
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT-LELGKQVH 446
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ + +++ MYSKCG +E VF +DV SWN+M+S NG
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
A+E+ E M +G EPD VT ++ A G V F + DP V + +
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566
Query: 241 ISGYSSVGR 249
+ S G+
Sbjct: 567 VDLLSRAGQ 575
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 161/361 (44%), Gaps = 47/361 (13%)
Query: 2 HLNSLLQAC---SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLF 58
H ++LL+ S ++L + +H ++ G+ L+ YA C L AHS+F
Sbjct: 13 HTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIF 72
Query: 59 RQLPQPNVFAFTSILAFHSRHG---LARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLA 115
+ +V ++ S++ +S++G + ++ + EMR + + P+ Y + KA + L
Sbjct: 73 NAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQ 132
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
+ D+ V S++ MY K G VE +VF M ER+ ++W++M+
Sbjct: 133 S-STVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 176 SCYVCNGLSQRAVEVLESM---RVDGCEPD------------------------------ 202
S Y G + A++V + +G + D
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG 251
Query: 203 ----VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
V N ++ Y + ++EA K+F+ D N I+W+ +++GYS G ++ +F
Sbjct: 252 LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFS 311
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYA 318
M + G + P + GVL +C + L GK++H + LK+ G + A AL+ +YA
Sbjct: 312 RMFSAG-IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL--GFERHLFATTALVDMYA 368
Query: 319 R 319
+
Sbjct: 369 K 369
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 158/354 (44%), Gaps = 41/354 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L + +A S+ +S +Q H ++ S + T L+ +Y + +F +P
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAE-MRFKGVSPDG-YVFPKVLKACAQLAALLEX 120
+ N + ++++++ ++ G + I+ + +R K D YVF VL + A +
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA-TIYVGL 239
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ + N+++ MYSKC + A ++FD +R+ +W++M++ Y
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVT----------------------------------- 205
NG S AV++ M G +P T
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
++D Y + G +++A K F+ +++ +V WT+LISGY + +L ++R M G+
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ P+ ++ VL +C L L GK++HG+ +K G G+AL T+Y++
Sbjct: 420 I-PNDPTMASVLKACSSLATLELGKQVHGHTIK--HGFGLEVPIGSALSTMYSK 470
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 61/111 (54%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ S+L+ACS+ +L KQ+H + + HG + + L +Y+ C L + +FR+ P
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+V ++ ++++ S +G + +E + EM +G+ PD F ++ AC+
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH 536
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 147/354 (41%), Gaps = 41/354 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTK--LIQIYADCDDLRSAHSLFRQ 60
+LL C+ + N Q+H + + G PF T L++ Y + L A LF +
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+P+ + F +++ + + GL + I + +MR G P + F VLKA L
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD-FAL 268
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV- 179
D V N +LD YSK V +FDEM E D S+N ++S Y
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 180 ---------------CNGLSQR------------AVEVLESMRVDGCEPDVVTR------ 206
C G +R + L+ R C+ + T
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 207 -NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
N+++D Y + + EA +F+ + +SWT LISGY G HG L +F +M +
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
D + VL + +L GK++H + ++ G + +G+ L+ +YA+
Sbjct: 449 R-ADQSTFATVLKASASFASLLLGKQLHAFIIR--SGNLENVFSGSGLVDMYAK 499
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 12/283 (4%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L + SL +QLH LL + L+ +YA C+ A +F+ LPQ
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR 415
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++T++++ + + GL ++ + +MR + D F VLKA A A+LL
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL-LGKQL 474
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
++ + ++DMY+KCG ++ A +VF+EM +R+ SWN+++S + NG
Sbjct: 475 HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDG 534
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTT 239
+ A+ M G +PD V+ V+ A G V + ++ F+ + P +
Sbjct: 535 EAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYAC 594
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVF-PDAGALSGVLVSCR 281
++ GR + E + D M F PD S VL +CR
Sbjct: 595 MLDLLGRNGRFAEA-----EKLMDEMPFEPDEIMWSSVLNACR 632
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 136/324 (41%), Gaps = 37/324 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ +L+A +QLH + G R +++ Y+ D + LF ++P
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + ++ +++ +S+ + + EM+ G + F +L A L++ L+
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS-LQMGR 371
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
L V NS++DMY+KC E A +F + +R SW +++S YV G
Sbjct: 372 QLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKG 431
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVM-------------------------------- 210
L +++ MR D T TV+
Sbjct: 432 LHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGS 491
Query: 211 ---DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
D Y + G + +A +VFE++ D N +SW LIS ++ G ++G F +M+ G+
Sbjct: 492 GLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQ- 550
Query: 268 PDAGALSGVLVSCRCLGALASGKE 291
PD+ ++ GVL +C G + G E
Sbjct: 551 PDSVSILGVLTACSHCGFVEQGTE 574
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 149/321 (46%), Gaps = 13/321 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++ + C ++NQ KQ+H Y + G + ++ ++ +Y C D+ +A F +P
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
P+ A+T++++ +G + +++MR GV PD + + KA + L A LE
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA-LEQGR 638
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V S++DMY+KCG ++ A +F + ++ +WN+M+ +G
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISW 237
+ +++ + M+ G +PD VT V+ A GLVSEA K + P + +
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
+ L ++GR G+ + ++ + A +L +CR G +GK +
Sbjct: 759 SCLA---DALGRAGL-VKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRV---AT 811
Query: 298 KIMPGEIFYRSAGAALLTLYA 318
K++ E SA L +YA
Sbjct: 812 KLLELEPLDSSAYVLLSNMYA 832
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 41/341 (12%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILA 74
SL +Q+H L G + LI +Y A ++F + + ++ ++ S++A
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389
Query: 75 FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXX 134
+++GL + + + ++ G+ PD Y VLKA + L L
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV 449
Query: 135 XDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM 194
D V +++D YS+ ++ A +F E D+ +WN+MM+ Y + + +++ M
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 195 RVDGCEPDVVTRNTV-----------------------------------MDAYCRMGLV 219
G D T TV +D Y + G +
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 220 SEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
S A F+ I P+ ++WTT+ISG G + +F +M G V PD ++ + +
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG-VLPDEFTIATLAKA 627
Query: 280 CRCLGALASGKEIHGYGLKIM-PGEIFYRSAGAALLTLYAR 319
CL AL G++IH LK+ + F G +L+ +YA+
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPF---VGTSLVDMYAK 665
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 135/326 (41%), Gaps = 20/326 (6%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+ S L K H +L + + F LI +Y+ C L A +F ++P +
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 66 VFAFTSILAFHSRHGL-----ARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ ++ SILA +++ +Q + +R V +LK C + +
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLH-SGYVWA 163
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D V +++++Y K G V+ +F+EM RDV WN M+ Y+
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRM-GLVSEASKV--FEQIKDPNVISW 237
G + A+++ + G P+ +T + R+ G S+A +V F D + +S
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEIT----LRLLARISGDDSDAGQVKSFANGNDASSVSE 279
Query: 238 TTL----ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
+S Y G++ L F +MV V D +L + + +LA G+++H
Sbjct: 280 IIFRNKGLSEYLHSGQYSALLKCFADMVESD-VECDQVTFILMLATAVKVDSLALGQQVH 338
Query: 294 GYGLKIMPGEIFYRSAGAALLTLYAR 319
LK+ G + +L+ +Y +
Sbjct: 339 CMALKL--GLDLMLTVSNSLINMYCK 362
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 111/214 (51%), Gaps = 2/214 (0%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR 78
+ +H ++ G + L+ +YA+C D+ SA+ +F ++P+ ++ A+ S++ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
+G + + Y EM KG+ PDG+ +L ACA++ AL +L
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT-LGKRVHVYMIKVGLTRNLH 125
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR-VD 197
N +LD+Y++CG VE A +FDEM +++ SW S++ NG + A+E+ + M +
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
G P +T ++ A G+V E + F ++++
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 219
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 35/188 (18%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
V NS+L +Y+ CGDV A +VFD+M E+D+ +WNS+++ + NG + A+ + M G
Sbjct: 25 VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 84
Query: 199 CEPDVVT-----------------------------------RNTVMDAYCRMGLVSEAS 223
+PD T N ++D Y R G V EA
Sbjct: 85 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 144
Query: 224 KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
+F+++ D N +SWT+LI G + G ++ +F+ M + + P G+L +C
Sbjct: 145 TLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHC 204
Query: 284 GALASGKE 291
G + G E
Sbjct: 205 GMVKEGFE 212
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 203 VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVN 262
+ +N+++ Y G V+ A KVF+++ + ++++W ++I+G++ G+ +L ++ EM +
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 263 DGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G + PD + +L +C +GAL GK +H Y +K+ G + LL LYAR
Sbjct: 83 KG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV--GLTRNLHSSNVLLDLYAR 136
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL AC+ +L K++H YM+ G R + L+ +YA C + A +LF ++
Sbjct: 94 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 153
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N ++TS++ + +G ++ IE + M +G+ P F +L AC+ + E
Sbjct: 154 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEY 213
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMSCYVCNG 182
+ ++D+ ++ G V+ A M + +V W +++ +G
Sbjct: 214 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Query: 183 LSQRA 187
S A
Sbjct: 274 DSDLA 278
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 5/229 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+LL + + + A+++ + + G+ R +I Y D+ SA LF +P+
Sbjct: 304 ALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR 360
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLAALLEXXXX 123
NV ++ S++A ++ +G A IE + +M G S PD VL AC +A L E
Sbjct: 361 NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL-ELGDC 419
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ S++ MY++ G++ A RVFDEM+ERDV S+N++ + + NG
Sbjct: 420 IVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGD 479
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP 232
+ +L M+ +G EPD VT +V+ A R GL+ E ++F+ I++P
Sbjct: 480 GVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNP 528
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 19/281 (6%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGS-HRKPFFTTKLIQIYADCDDLRS----AHSLFR 59
SL S + + Q Q+H +++ S R+ ++ +++I C LR+ +F
Sbjct: 8 SLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISC---CTRLRAPSYYTRLIFD 64
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ PNVF S+ + S+ +A + Y + G+ PD + FP V+K+ + L +
Sbjct: 65 SVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQ 124
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D V N ++DMY K VE A +VFD++ +R WN M+S Y
Sbjct: 125 ALVEKLGFFK------DPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYW 178
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
G + A ++ + M E DVV+ ++ + ++ + A K F+++ + +V+SW
Sbjct: 179 KWGNKEEACKLFDMM----PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNA 234
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
++SGY+ G +L +F +M+ G V P+ V+ +C
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLG-VRPNETTWVIVISAC 274
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 133/283 (46%), Gaps = 41/283 (14%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T +I +A DL +A F ++P+ +V ++ ++L+ ++++G + + +M GV
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR 261
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
P+ + V+ AC+ A + V ++LDM++KC D++ A R
Sbjct: 262 PNETTWVIVISACS-FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARR 320
Query: 159 VFDEM-RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
+F+E+ +R++ +WN+M+S Y R+G
Sbjct: 321 IFNELGTQRNLVTWNAMIS-----------------------------------GYTRIG 345
Query: 218 LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
+S A ++F+ + NV+SW +LI+GY+ G+ +++ F +M++ G PD + VL
Sbjct: 346 DMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVL 405
Query: 278 VSCRCLGALASGKEIHGYGLKIMPGEIFYRSAG-AALLTLYAR 319
+C + L G I Y I +I +G +L+ +YAR
Sbjct: 406 SACGHMADLELGDCIVDY---IRKNQIKLNDSGYRSLIFMYAR 445
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 142/317 (44%), Gaps = 7/317 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ACSAS+ +H L G F ++ L+ +Y D L A LF +P +
Sbjct: 140 ILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRD 199
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+T++ + + G A + + EM + G + D V +L AC QL AL +
Sbjct: 200 SVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGAL-KHGKSVH 258
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
L + N++ DMY KC ++ A VF M RDV SW+S++ Y +G
Sbjct: 259 GWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVV 318
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYS 245
+ ++ + M +G EP+ VT V+ A GLV ++ F +++ N++ + Y+
Sbjct: 319 MSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIV---PELKHYA 375
Query: 246 SVGRHGVSLGIFRE---MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPG 302
SV G+ E + D V PD + VL C+ G + G+ + +++ P
Sbjct: 376 SVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPR 435
Query: 303 EIFYRSAGAALLTLYAR 319
+ Y A L + R
Sbjct: 436 KASYYVTLAGLYSAAGR 452
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 119/281 (42%), Gaps = 39/281 (13%)
Query: 37 FTTKLIQIYADCDDL-RSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM-RF 94
++KL+ Y+ + L ++ S+F +P N+F++ I+ SR G A + I+ + M R
Sbjct: 68 LSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRE 127
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
V PD + P +L+AC+ + + L V ++++ MY G +
Sbjct: 128 SCVRPDDFTLPLILRACSA-SREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLL 186
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTR-------- 206
A ++FD+M RD + +M YV G + + + M G D V
Sbjct: 187 HARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACG 246
Query: 207 ---------------------------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
N + D Y + ++ A VF + +VISW++
Sbjct: 247 QLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSS 306
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
LI GY G +S +F EM+ +G + P+A GVL +C
Sbjct: 307 LILGYGLDGDVVMSFKLFDEMLKEG-IEPNAVTFLGVLSAC 346
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 1/159 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL AC +L K +H + + S + +Y C L AH++F + +
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRR 299
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V +++S++ + G + + EM +G+ P+ F VL ACA L+E
Sbjct: 300 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH-GGLVEKSWLY 358
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+L+ SV D S+ G +E A + ++M
Sbjct: 359 FRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM 397
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 140/336 (41%), Gaps = 45/336 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L A + + L Q+H G + + T I +Y+ C ++ +LFR+
Sbjct: 224 LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR 283
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+P++ A+ +++ ++ +G + + E+ G ++ L +
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHG 343
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
V ++ +YSK ++E A ++FDE E+ + SWN+M+S Y NG
Sbjct: 344 YCLKSNFLSHAS----VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDA------------------------------ 212
L++ A+ + M+ P+ VT ++ A
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 213 -----YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
Y + G ++EA ++F+ + N ++W T+ISGY G+ +L IF EM+N G+
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT- 518
Query: 268 PDAGALSGVLVSCRCLGALASGKE-----IHGYGLK 298
P VL +C G + G E IH YG +
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE 554
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 19/272 (6%)
Query: 24 HYMLLHGSH----RKPFFT-----TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILA 74
H ML++ H + F + T L +Y+ +++ SA LF + P+ ++ ++ ++++
Sbjct: 334 HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 75 FHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXX 134
++++GL I + EM+ SP+ +L ACAQL AL
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL-SLGKWVHDLVRSTDFE 452
Query: 135 XDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM 194
+ V +++ MY+KCG + A R+FD M +++ +WN+M+S Y +G Q A+ + M
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512
Query: 195 RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGR 249
G P VT V+ A GLV E ++F + +P+V + ++ G
Sbjct: 513 LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGH 572
Query: 250 HGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+L M + P + +L +CR
Sbjct: 573 LQRALQFIEAM----SIEPGSSVWETLLGACR 600
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 10/231 (4%)
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
L F R +T+A++ G D + K+ + + L A+
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIY-----YARDIFLSV 78
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS----QRAV 188
D+ + N ++ +S + VF +R+ NS + + S RA
Sbjct: 79 QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138
Query: 189 EVLESMRV-DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSV 247
V+ V DGC+ +++ + ++ Y + V +A KVF+++ + + I W T+ISGY
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 248 GRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+ S+ +FR+++N+ D L +L + L L G +IH K
Sbjct: 199 EMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK 249
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 103/259 (39%), Gaps = 60/259 (23%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L AC+ +L+ K +H + + +T LI +YA C + A LF + + N
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++++ + HG ++ + + EM G++P F VL AC
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC-------------- 531
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC----- 180
S G V+ +F+ M R + + + Y C
Sbjct: 532 ----------------------SHAGLVKEGDEIFNSMIHR--YGFEPSVKHYACMVDIL 567
Query: 181 --NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG-------LVSEASKVFEQIKD 231
G QRA++ +E+M + EP T++ A CR+ VSE K+FE D
Sbjct: 568 GRAGHLQRALQFIEAMSI---EPGSSVWETLLGA-CRIHKDTNLARTVSE--KLFEL--D 619
Query: 232 PNVISWTTLISGYSSVGRH 250
P+ + + L+S S R+
Sbjct: 620 PDNVGYHVLLSNIHSADRN 638
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 144/353 (40%), Gaps = 79/353 (22%)
Query: 14 KSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFT--- 70
+L KQ H YM++ G +R K I+ ++ LR A+S+F P PN +
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI 85
Query: 71 ---SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
S+L + H +A I Y ++ PD + FP VLK +++ +
Sbjct: 86 RALSLLDEPNAHSIA---ITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVW-FGRQIHGQ 141
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNS-------------- 173
+ V ++ MY CG + A ++FDEM +DV WN+
Sbjct: 142 VVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEA 201
Query: 174 -----MMSCYVCN--------------GLSQRAVEVLESMRVDGCEPDVVT--------- 205
MM C+V N G + A+EV + M ++ EPD VT
Sbjct: 202 RSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACA 261
Query: 206 --------------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
N V+D Y + G +++A VFE + + NV++WTT
Sbjct: 262 DLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTT 321
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+I+G ++ G +L +F MV G V P+ +L +C +G + GK +
Sbjct: 322 IIAGLATHGHGAEALAMFNRMVKAG-VRPNDVTFIAILSACSHVGWVDLGKRL 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 12/254 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ L+Q + L A+++ ML+ + L+ Y ++ A SL +P
Sbjct: 154 VTGLIQMYFSCGGLGDARKMFDEMLV----KDVNVWNALLAGYGKVGEMDEARSLLEMMP 209
Query: 63 --QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
N ++T +++ +++ G A + IE + M + V PD VL ACA L +L E
Sbjct: 210 CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL-EL 268
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
+ + N+V+DMY+K G++ A VF+ + ER+V +W ++++
Sbjct: 269 GERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLAT 328
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVI 235
+G A+ + M G P+ VT ++ A +G V ++F ++ PN+
Sbjct: 329 HGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIE 388
Query: 236 SWTTLISGYSSVGR 249
+ +I G+
Sbjct: 389 HYGCMIDLLGRAGK 402
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 141/355 (39%), Gaps = 66/355 (18%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL+ + + ++H ++L H H I I + A+ +F + PN
Sbjct: 7 LLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPN 66
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-------- 117
V F +++ +S G + + ++ M+ +G+ D Y + +LK+C+ L+ L
Sbjct: 67 VLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHG 126
Query: 118 -----------------LEXXXXXXXXXXXXXXXXDLR-----VCNSVLDMYSKCGDVEG 155
+E ++ V N ++ + GDVE
Sbjct: 127 ELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVER 186
Query: 156 AARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD------------- 202
+F +M ER + SWNSM+S G + A+E+ M G +PD
Sbjct: 187 GLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISAS 246
Query: 203 -----------------------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
+ N ++D YC+ G + A+ +F +++ NV+SW T
Sbjct: 247 LGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNT 306
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
LISG + G+ + +F M+ +G V P+ GVL C G + G+E+ G
Sbjct: 307 LISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 10/278 (3%)
Query: 31 SHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYA 90
S R +I+ + D D+ LF+Q+ + ++ ++ S+++ S+ G R+ +E +
Sbjct: 164 SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFC 223
Query: 91 EMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
EM +G PD VL A L L + V N+++D Y K
Sbjct: 224 EMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS 283
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG-CEPDVVTRNTV 209
GD+E A +F +M+ R+V SWN+++S NG + +++ ++M +G P+ T V
Sbjct: 284 GDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGV 343
Query: 210 MDAYCRMGLVSEASKVF----EQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
+ G V ++F E+ K + + ++ S GR + + M
Sbjct: 344 LACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMP--- 400
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPG 302
V +A +L +CR G + + +KI PG
Sbjct: 401 -VNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPG 437
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 142/325 (43%), Gaps = 44/325 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ +CS + Q+H + G + + + +Y+ +D +AH +F L +
Sbjct: 296 SVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEK 352
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ + ++++ +++ L + + Y M GV PD + F +L L L
Sbjct: 353 DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL----EMV 408
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ + N+++ YSK G +E A +F+ +++ SWN+++S + NG
Sbjct: 409 QACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFP 468
Query: 185 QRAVE----VLES-MRV--------------------------------DGCEPDVVTRN 207
+E +LES +R+ G + + N
Sbjct: 469 FEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGN 528
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+++ Y + G + + +VF Q+ + +V+SW +LIS YS G ++ ++ M ++G V
Sbjct: 529 ALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVI 588
Query: 268 PDAGALSGVLVSCRCLGALASGKEI 292
PDA S VL +C G + G EI
Sbjct: 589 PDAATFSAVLSACSHAGLVEEGLEI 613
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 10/206 (4%)
Query: 30 GSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETY 89
G K + LI Y+ + A LF + + N+ ++ +I++ +G + +E +
Sbjct: 416 GLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERF 475
Query: 90 A-----EMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVL 144
+ E+R + PD Y +L C ++L+ L + N+++
Sbjct: 476 SCLLESEVR---ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETL-IGNALI 531
Query: 145 DMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG-CEPDV 203
+MYS+CG ++ + VF++M E+DV SWNS++S Y +G + AV ++M+ +G PD
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDA 591
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQI 229
T + V+ A GLV E ++F +
Sbjct: 592 ATFSAVLSACSHAGLVEEGLEIFNSM 617
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 136/339 (40%), Gaps = 40/339 (11%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILA 74
SL+ KQ+H ++ G LI +Y +C + A +F + T +
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 75 FHSRHGLAR-QCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXX 133
G R + + + +M + P F V+ +C+ A +
Sbjct: 264 IDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYT 323
Query: 134 XXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLES 193
V N+ + MYS D A +VF+ + E+D+ +WN+M+S Y L + A+ V +
Sbjct: 324 L----VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 194 MRVDGCEPDVVT--------------------------------RNTVMDAYCRMGLVSE 221
M + G +PD T N ++ AY + G + +
Sbjct: 380 MHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEK 439
Query: 222 ASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM-VFPDAGALSGVLVSC 280
A +FE+ N+ISW +ISG+ G L F ++ + + PDA LS +L C
Sbjct: 440 ADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Query: 281 RCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+L G + H Y L+ G+ G AL+ +Y++
Sbjct: 500 VSTSSLMLGSQTHAYVLR--HGQFKETLIGNALINMYSQ 536
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L++LL C ++ SL Q H Y+L HG ++ LI +Y+ C ++++ +F Q+
Sbjct: 492 LSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS 551
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLE 119
+ +V ++ S+++ +SRHG + TY M+ +G V PD F VL AC+ A L+E
Sbjct: 552 EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSH-AGLVE 608
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 40/180 (22%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
V N++L +Y + G++ + FDE+ E
Sbjct: 94 VSNTLLSLYERLGNLASLKKKFDEIDE--------------------------------- 120
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-PNVISWTTLISGYSSVGRHGVSLGIF 257
PDV + T++ A ++G + A +VF+++ + +V W +I+G G H S+ +F
Sbjct: 121 --PDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELF 178
Query: 258 REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLY 317
REM G V D + +L C G+L GK++H L I G S AL+T+Y
Sbjct: 179 REMHKLG-VRHDKFGFATILSMCD-YGSLDFGKQVH--SLVIKAGFFIASSVVNALITMY 234
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 134/326 (41%), Gaps = 72/326 (22%)
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
L P++ + +L + + + + E+R +G+ PD + P VLK+ +L ++E
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D V NS++ MY+ G +E +VFDEM +RDV SWN ++S YV
Sbjct: 66 EKVHGYAVKAGLEF-DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 181 NGLSQRAVEVLESMR-----------------------------------VDGCEPDVVT 205
NG + A+ V + M V E V
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG----------------- 248
N ++D +C+ G + +A VF+ ++D NV WT+++ GY S G
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 249 --------------RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
R +L +FR M G + PD L +L C GAL GK IHG
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAG-IRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 295 YGLKIMPGEIFY-RSAGAALLTLYAR 319
Y I + + G AL+ +YA+
Sbjct: 304 Y---INENRVTVDKVVGTALVDMYAK 326
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 144/354 (40%), Gaps = 70/354 (19%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L++ + + + +++H Y + G + + L+ +YA + H +F ++PQ +
Sbjct: 52 VLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRD 111
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
V ++ +++ + +G I + M + + D L AC+ L L
Sbjct: 112 VVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNL--EIGER 169
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG-- 182
+R+ N+++DM+ KCG ++ A VFD MR+++V W SM+ YV G
Sbjct: 170 IYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRI 229
Query: 183 -----LSQR------------------------AVEVLESMRVDGCEPD----------- 202
L +R A+E+ M+ G PD
Sbjct: 230 DEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGC 289
Query: 203 ------------------------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
V ++D Y + G + A +VF +IK+ + SWT
Sbjct: 290 AQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWT 349
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+LI G + G G +L ++ EM N G V DA VL +C G +A G++I
Sbjct: 350 SLIYGLAMNGMSGRALDLYYEMENVG-VRLDAITFVAVLTACNHGGFVAEGRKI 402
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T ++ Y + A LF + P +V +T+++ + + + +E + M+ G+
Sbjct: 217 TSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD +V +L CAQ AL E D V +++DMY+KCG +E A
Sbjct: 277 PDNFVLVSLLTGCAQTGAL-EQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALE 335
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
VF E++ERD SW S++ NG+S RA+++ M G D +T V+ A G
Sbjct: 336 VFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGF 395
Query: 219 VSEASKVFEQIKD 231
V+E K+F + +
Sbjct: 396 VAEGRKIFHSMTE 408
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 11/239 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L SLL C+ + +L Q K +H Y+ + T L+ +YA C + +A +F ++
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + ++TS++ + +G++ + ++ Y EM GV D F VL AC + E
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSC- 177
C+ ++D+ + G ++ A + D+MR E V + S++S
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAA 461
Query: 178 --YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
Y +++R E LE + V D + Y + + V ++KD +
Sbjct: 462 RNYGNVKIAERVAEKLEKVEV----SDSSAHTLLASVYASANRWEDVTNVRRKMKDLGI 516
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 143/323 (44%), Gaps = 39/323 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ LL+A S+ Q K++H +L G K T+L++ D+ A +F ++
Sbjct: 13 LSELLRASSSKP--KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMH 70
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+P +F + ++ + R+ L + + Y +MR GV PD + +P V+KA +QL
Sbjct: 71 KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFA 130
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V ++ MY K G++ A +F+ M+ +D+ +WN+ ++ V G
Sbjct: 131 LHAHVVKYGFGCLGI-VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTG 189
Query: 183 LSQRAVEVLESMRVDGCEPD-----------------------------------VVTRN 207
S A+E M D + D ++ N
Sbjct: 190 NSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVEN 249
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+D + + G A +FE++K NV+SW+T+I GY+ G +L +F M N+G+
Sbjct: 250 ARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR- 308
Query: 268 PDAGALSGVLVSCRCLGALASGK 290
P+ GVL +C G + GK
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGK 331
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 6/284 (2%)
Query: 22 LHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGL 81
LH +++ +G T+L+ +Y +L SA LF + ++ A+ + LA + G
Sbjct: 131 LHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGN 190
Query: 82 ARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCN 141
+ +E + +M V D + +L AC QL +L E ++ V N
Sbjct: 191 SAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSL-EIGEEIYDRARKEEIDCNIIVEN 249
Query: 142 SVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP 201
+ LDM+ KCG+ E A +F+EM++R+V SW++M+ Y NG S+ A+ + +M+ +G P
Sbjct: 250 ARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRP 309
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSS----VGRHGVSLGIF 257
+ VT V+ A GLV+E + F + N + Y+ +GR G+ L
Sbjct: 310 NYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGL-LEEA 368
Query: 258 REMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
E + V PD G +L +C + G+++ ++ P
Sbjct: 369 YEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAP 412
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 135/282 (47%), Gaps = 9/282 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S ++C+ + + +H + G F + L+ +YA C ++ A +F ++P
Sbjct: 119 LPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP 178
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
Q NV ++ ++ +++ G + + + E F+ ++ + Y F V+ CA + LLE
Sbjct: 179 QRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCAN-STLLELGR 237
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
V +S++ +YSKCG EGA +VF+E+ +++ WN+M+ Y +
Sbjct: 238 QIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHS 297
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWT 238
+Q+ +E+ + M++ G +P+ +T V++A GLV E F+Q+K +P +
Sbjct: 298 HTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYA 357
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+L+ GR +L + M D P +L SC
Sbjct: 358 SLVDMLGRAGRLQEALEVITNMPID----PTESVWGALLTSC 395
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 37/320 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL + + ++S + QLH Y++ G P LI Y+ + F PQ +
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++SI++ +++ L +E +M + PD +V P K+CA L+ +
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSR-CDIGRSVH 139
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D+ V +S++DMY+KCG++ A ++FDEM +R+V +W+ MM Y G ++
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENE 199
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDA--------------------------------- 212
A+ + + + + + ++V+
Sbjct: 200 EALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLV 259
Query: 213 --YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
Y + G+ A +VF ++ N+ W ++ Y+ + +F+ M GM P+
Sbjct: 260 SLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK-PNF 318
Query: 271 GALSGVLVSCRCLGALASGK 290
VL +C G + G+
Sbjct: 319 ITFLNVLNACSHAGLVDEGR 338
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 137/302 (45%), Gaps = 10/302 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+++A K+LH + G F + I +Y + +A +F + P+
Sbjct: 123 VIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERK 182
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEXXXXX 124
+ ++ +I+ + G A + +E + +M+ G+ PD + V +C L L L
Sbjct: 183 LGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHK 242
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ + NS++DMY KCG ++ A+ +F+EMR+R+V SW+SM+ Y NG +
Sbjct: 243 CVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNT 302
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTT 239
A+E MR G P+ +T V+ A GLV E F +K +P + +
Sbjct: 303 LEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGC 362
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
++ S G+ L +++V + + P+ ++ C G + + + Y +++
Sbjct: 363 IVDLLSRDGQ----LKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVEL 418
Query: 300 MP 301
P
Sbjct: 419 EP 420
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 134/319 (42%), Gaps = 52/319 (16%)
Query: 21 QLHHYMLLHGSHRKPFFTTK----LIQIYADCDDL---RSAH-SLFRQ--LPQ-PNVFAF 69
+L+H++ S P L + ++C L R H +FR L Q P F +
Sbjct: 26 RLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLW 85
Query: 70 TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXX 129
+I+ + RH I+ Y M V PD Y P V+KA Q+
Sbjct: 86 NNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVR 145
Query: 130 XXXXXXDLRVCNS-VLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAV 188
+ C S + +Y K G+ E A +VFDE ER + SWN+++ G + AV
Sbjct: 146 LGFVGDEF--CESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 189 EVLESMRVDGCEP-------------------------------------DVVTRNTVMD 211
E+ M+ G EP D++ N+++D
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + G + AS +FE+++ NV+SW+++I GY++ G +L FR+M G V P+
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG-VRPNKI 322
Query: 272 ALSGVLVSCRCLGALASGK 290
GVL +C G + GK
Sbjct: 323 TFVGVLSACVHGGLVEEGK 341
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 134/306 (43%), Gaps = 10/306 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ +L+ACS + + + ++H Y+L + L+ YA + A ++ R +
Sbjct: 430 LSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK 489
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + +TS++ + G + M G+ D P + A A L AL E
Sbjct: 490 RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGAL-ETGK 548
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
V NS++DMYSKCG +E A +VF+E+ DV SWN ++S NG
Sbjct: 549 HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNG 608
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISW 237
A+ E MR+ EPD VT ++ A L + F+ +K +P V +
Sbjct: 609 FISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHY 668
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
L+ GR + G+ M + P+A +L +CR G L+ G+++ GL
Sbjct: 669 VHLVGILGRAGRLEEATGVVETM----HLKPNAMIFKTLLRACRYRGNLSLGEDMANKGL 724
Query: 298 KIMPGE 303
+ P +
Sbjct: 725 ALAPSD 730
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 45/354 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+S++++C+ + ++ ++H ++ G + L +Y+ C + A LF L
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++T +++ R+ ++ Y+EM GV P+ + F K+L A + L LE
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG--LEFGK 244
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ + S++D YS+ +E A RV + E+DVF W S++S +V N
Sbjct: 245 TIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL 304
Query: 183 LSQRAVEVLESMRVDGCEPDVVTR-----------------------------------N 207
++ AV MR G +P+ T N
Sbjct: 305 RAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN 364
Query: 208 TVMDAY--CRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
++D Y C V EAS+VF + PNV+SWTTLI G G G+ EMV
Sbjct: 365 ALVDMYMKCSASEV-EASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE- 422
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYA 318
V P+ LSGVL +C L + EIH Y L+ + GE+ G +L+ YA
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV---VGNSLVDAYA 473
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 38/328 (11%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L S+ L K +H +++ G T L+ Y+ + A + + +V
Sbjct: 231 LLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDV 290
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
F +TS+++ R+ A++ + T+ EMR G+ P+ + + +L C+ + + L+
Sbjct: 291 FLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRS-LDFGKQIHS 349
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVE-GAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
V N+++DMY KC E A+RVF M +V SW +++ V +G Q
Sbjct: 350 QTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQ 409
Query: 186 RAVEVLESMRVDGCEPDVVTR-----------------------------------NTVM 210
+L M EP+VVT N+++
Sbjct: 410 DCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLV 469
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
DAY V A V +K + I++T+L++ ++ +G+H ++L + M DG+ D
Sbjct: 470 DAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRM-DQ 528
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLK 298
+L G + + LGAL +GK +H Y +K
Sbjct: 529 LSLPGFISASANLGALETGKHLHCYSVK 556
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 37/293 (12%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLR-SAHSLFRQLP 62
+++L CSA +SL+ KQ+H + G L+ +Y C A +F +
Sbjct: 329 SAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMV 388
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
PNV ++T+++ HG + C EM + V P+ VL+AC++L +
Sbjct: 389 SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRH-VRRVL 447
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V NS++D Y+ V+ A V M+ RD ++ S+++ + G
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Query: 183 LSQRAVEVLESMRVDGCEPDVVT-----------------------------------RN 207
+ A+ V+ M DG D ++ N
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN 567
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
+++D Y + G + +A KVFE+I P+V+SW L+SG +S G +L F EM
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM 620
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 132/315 (41%), Gaps = 38/315 (12%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
L+ +Y D + +A LF ++ VFA+T +++ ++ + + EM G
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
P+ + F V+++CA L + + V +S+ D+YSKCG + A
Sbjct: 122 PNEFTFSSVVRSCAGLRDI-SYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACE 180
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP----------------- 201
+F ++ D SW M+S V + A++ M G P
Sbjct: 181 LFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
Query: 202 -----------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY 244
+VV + +++D Y + + +A +V + +V WT+++SG+
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF 300
Query: 245 SSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEI 304
R ++G F EM + G+ P+ S +L C + +L GK+IH +K+ G
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQ-PNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV--GFE 357
Query: 305 FYRSAGAALLTLYAR 319
G AL+ +Y +
Sbjct: 358 DSTDVGNALVDMYMK 372
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 37/193 (19%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
+L +CN++L +Y K + A ++FDEM R VF+W M+S + + A+ + E M
Sbjct: 57 NLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMM 116
Query: 196 VDGCEPDVVTRNTVM-----------------------------------DAYCRMGLVS 220
G P+ T ++V+ D Y + G
Sbjct: 117 ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFK 176
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
EA ++F +++ + ISWT +IS + +L + EMV G V P+ +L +
Sbjct: 177 EACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG-VPPNEFTFVKLLGAS 235
Query: 281 RCLGALASGKEIH 293
LG L GK IH
Sbjct: 236 SFLG-LEFGKTIH 247
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
+ L + A + +L K LH Y + G L+ +Y+ C L A +F +
Sbjct: 529 LSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEE 588
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+ P+V ++ +++ + +G + + EMR K PD F +L AC+
Sbjct: 589 IATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSN 641
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 147/354 (41%), Gaps = 60/354 (16%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+AC L + Q+H + G + ++ +Y +A +F L P+V
Sbjct: 85 LKACRGD--LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 142
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++ +IL+ + +A + M+ GV D + + L C L
Sbjct: 143 VSWNTILSGFDDNQIALNFV---VRMKSAGVVFDAFTYSTALSFCVGSEGFL-LGLQLQS 198
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ- 185
DL V NS + MYS+ G GA RVFDEM +D+ SWNS++S GLSQ
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLS-----GLSQE 253
Query: 186 -----RAVEVLESMRVDGCEPD------VVTR---------------------------- 206
AV + M +G E D V+T
Sbjct: 254 GTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEV 313
Query: 207 -NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
N +M Y + G++ VF Q+ + NV+SWTT+IS ++ IF M DG
Sbjct: 314 GNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDG- 367
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
V+P+ G++ + +C + G +IH GL I G + S G + +TLYA+
Sbjct: 368 VYPNEVTFVGLINAVKCNEQIKEGLKIH--GLCIKTGFVSEPSVGNSFITLYAK 419
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 139/305 (45%), Gaps = 17/305 (5%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+ A ++ + + ++H + G +P I +YA + L A F +
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE 437
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ ++++ +++G + + ++ + + + P+ Y F VL A +A +
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNA---IAFAEDISVKQG 493
Query: 126 XXXXXXXXXXDLRVC----NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
L C +++LDMY+K G+++ + +VF+EM +++ F W S++S Y +
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-----KDPNVIS 236
G + + + M + PD+VT +V+ A R G+V + ++F + +P+
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 613
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYG 296
++ ++ GR L E++++ P L +L SCR G + G ++
Sbjct: 614 YSCMVDMLGRAGR----LKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELA 669
Query: 297 LKIMP 301
+++ P
Sbjct: 670 MEMKP 674
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 123/296 (41%), Gaps = 39/296 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL AC ++ Q+H + + G KL+ Y+ + A S+
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDIL 107
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ + ++A ++++ L + I Y M KG+ PD + +P VLKAC + +
Sbjct: 108 HPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDV-AFGRVV 166
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
L VCN+++ MY + ++ A R+FD M ERD SWN++++CY G+
Sbjct: 167 HGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY 244
A E+ + M G E V+T W + G
Sbjct: 227 SEAFELFDKMWFSGVEVSVIT-------------------------------WNIISGGC 255
Query: 245 SSVGRHGVSLGIFREMVNDGMVFP---DAGALSGVLVSCRCLGALASGKEIHGYGL 297
G + +LG+ M N FP D A+ L +C +GA+ GKEIHG +
Sbjct: 256 LQTGNYVGALGLISRMRN----FPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 132/290 (45%), Gaps = 11/290 (3%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRK-PFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+ACS ++ K++H + +H S+ LI +Y+ C DLR A +FRQ + +
Sbjct: 287 LKACSLIGAIRLGKEIHG-LAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENS 345
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ + SI++ +++ + + EM G P+ +L CA++A L
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHC 405
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ NS++D+Y+K G + A +V D M +RD ++ S++ Y G
Sbjct: 406 YILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGG 465
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
A+ + + M G +PD VT V+ A LV E ++F +++ P + ++ +
Sbjct: 466 VALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCM 525
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+ Y GR G L ++++++ P + +L +C G GK
Sbjct: 526 VDLY---GRAGF-LAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGK 571
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 41/333 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+ACS + + Q+H + G + LI YA + + AH LF ++P+P
Sbjct: 120 SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP 179
Query: 65 -------------------------------NVFAFTSILAFHSRHGLARQCIETYAEMR 93
N ++T++++ + + + ++ ++ + EM+
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 94 FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
V PD L ACAQL AL + + C ++DMY+KCG++
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGC-VLIDMYAKCGEM 298
Query: 154 EGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAY 213
E A VF ++++ V +W +++S Y +G + A+ M+ G +P+V+T V+ A
Sbjct: 299 EEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 358
Query: 214 CRMGLVSEASKVFEQI-KDPNVISWTTLISGYSSV----GRHGVSLGIFREMVNDGMVFP 268
GLV E +F + +D N+ I Y + GR G+ L + + + + P
Sbjct: 359 SYTGLVEEGKLIFYSMERDYNL---KPTIEHYGCIVDLLGRAGL-LDEAKRFIQEMPLKP 414
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
+A +L +CR + G+EI + I P
Sbjct: 415 NAVIWGALLKACRIHKNIELGEEIGEILIAIDP 447
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 122/294 (41%), Gaps = 43/294 (14%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQI---YADCDDLRSAHSLFRQL 61
S LQ CS + L KQ+H ML G + + TK + D L A +F
Sbjct: 19 SCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+P+ F + ++ S + + Y M + Y FP +LKAC+ L+A E
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA-FEET 134
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D+ NS+++ Y+ G+ + A +FD + E D SWNS
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS-------- 186
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLI 241
V+ Y + G + A +F ++ + N ISWTT+I
Sbjct: 187 ---------------------------VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMI 219
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
SGY + +L +F EM N V PD +L+ L +C LGAL GK IH Y
Sbjct: 220 SGYVQADMNKEALQLFHEMQNSD-VEPDNVSLANALSACAQLGALEQGKWIHSY 272
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L + L AC+ +L Q K +H Y+ LI +YA C ++ A +F+ +
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V A+T++++ ++ HG R+ I + EM+ G+ P+ F VL AC+ + E
Sbjct: 310 KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ ++D+ + G ++ A R EM
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 139/326 (42%), Gaps = 51/326 (15%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKP--FFTTKLIQIYADCDDLRSAHSLFRQLP- 62
LL+ C+ L K+LH + G + P + + L Q YA ++ +A LF ++P
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 63 -QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ + +T++L+ SR+GL ++ + EMR K V D + CA+L L
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDL-GFA 130
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
++VCN+++DMY KCG V R+F+E+ E+ V SW
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSW---------- 180
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLI 241
V+D + + +VF ++ + N ++WT ++
Sbjct: 181 -------------------------TVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMV 215
Query: 242 SGYSSVGRHGVSLGIFREMV---NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+GY G L + EMV G+ F L +L +C G L G+ +H Y LK
Sbjct: 216 AGYLGAGFTREVLELLAEMVFRCGHGLNFV---TLCSMLSACAQSGNLVVGRWVHVYALK 272
Query: 299 ---IMPGEIFYRS--AGAALLTLYAR 319
+M E Y G AL+ +YA+
Sbjct: 273 KEMMMGEEASYDDVMVGTALVDMYAK 298
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 16/280 (5%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK-GV 97
T ++ + L +F ++P+ N A+T ++A + G R+ +E AEM F+ G
Sbjct: 181 TVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH 240
Query: 98 SPDGYVFPKVLKACAQLAALLE------XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
+ +L ACAQ L+ D+ V +++DMY+KCG
Sbjct: 241 GLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCG 300
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
+++ + VF MR+R+V +WN++ S +G + +++ M + +PD +T V+
Sbjct: 301 NIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLS 359
Query: 212 AYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
A G+V E + F ++ +P V + ++ G + + REM V
Sbjct: 360 ACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP----VP 415
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYR 307
P+ L +L SC G + + I +++ PG Y+
Sbjct: 416 PNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQ 455
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLL-------HGSHRKPFFTTKLIQIYADCDDLRSAH 55
L S+L AC+ S +L + +H Y L S+ T L+ +YA C ++ S+
Sbjct: 247 LCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSM 306
Query: 56 SLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
++FR + + NV + ++ + + HG R I+ + +M + V PD F VL AC+
Sbjct: 307 NVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSH 363
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 144/303 (47%), Gaps = 15/303 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+++ S + A++L M +H+ T +I Y + D+ +A LF +P+
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEM----THKTVITWTTMIHGYCNIKDIDAARKLFDAMPE 235
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLAALLEXXX 122
N+ ++ +++ + ++ ++ I + EM+ + PD VL A + AL
Sbjct: 236 RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGAL-SLGE 294
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++VC ++LDMYSKCG++E A R+FDEM E+ V SWN+M+ Y NG
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNG 354
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
++ A+++ +M ++ +PD +T V+ A GLV E K F +++ + I
Sbjct: 355 NARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMRE---MGLNAKIE 410
Query: 243 GYSS----VGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
Y +GR G SL +++ + P+ LS L +C + + I ++
Sbjct: 411 HYGCMVDLLGRAG-SLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVE 469
Query: 299 IMP 301
+ P
Sbjct: 470 LEP 472
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 6/243 (2%)
Query: 26 MLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ-PNVFAFTSILAFHSRHGLARQ 84
ML H TK + I A + A LF Q PQ + F S++ +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 85 CIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSV 143
Y ++R + +PD + F + K+C+ L+ + D+ V V
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCS-LSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 144 LDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDV 203
+DMY+K G + A FDEM R SW +++S Y+ G A ++ + M DV
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM---PHVKDV 176
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
V N +MD + + G ++ A ++F+++ VI+WTT+I GY ++ + +F M
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPER 236
Query: 264 GMV 266
+V
Sbjct: 237 NLV 239
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 41/299 (13%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
L+ +YA ++L SA +F + ++ ++ +I+ +G R+ ++ + M G D
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEAD 288
Query: 101 GYVFPKVLKACAQLAAL-LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
F V+ AC+ + L L + V NS++ MYSKCGD E A V
Sbjct: 289 TVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETV 348
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR-VDGCEPDVVTR------------ 206
F+E+ RDV S N++++ + NG+ + A +L M+ VD +PD+ T
Sbjct: 349 FEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSF 408
Query: 207 ------------------------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
N+V+D Y + GL ++A +F+ +++SW ++IS
Sbjct: 409 SREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMIS 468
Query: 243 GYSSVGRHGVSLGIFREMVNDGMV--FPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+S G + +F+E+V++ F + L+ +L SC +L GK +H + K+
Sbjct: 469 AFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLA-ILTSCDSSDSLIFGKSVHCWLQKL 526
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 143/336 (42%), Gaps = 24/336 (7%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFT--TKLIQIYADCDDLRSAHSLFRQLPQ 63
++ ACS+ + L + LH ++ G + + +I +Y+ C D +A ++F +L
Sbjct: 295 VISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVC 354
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V + +IL + +G+ + +M+ + PD + C L+ E
Sbjct: 355 RDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRA 414
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
L V NSV+DMY KCG A +F RD+ SWNSM+S + NG
Sbjct: 415 VHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG 474
Query: 183 LSQRAVEVLESMRVD-GCEPDVVTRNTVMDAYC-----------------RMGLVSEASK 224
+ +A + + + + C ++ + C ++G ++ A
Sbjct: 475 FTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL 534
Query: 225 VFEQIKDP-NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
E + + ++ SW ++ISG +S G H SL F+ M +G + D L G + + L
Sbjct: 535 RLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNL 594
Query: 284 GALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G + G+ HG +K + L+T+Y R
Sbjct: 595 GLVLQGRCFHGLAIKSL--RELDTQLQNTLITMYGR 628
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 141/345 (40%), Gaps = 56/345 (16%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
M L +L++ + +H + L G + ++KL+ Y +L S+ LF +
Sbjct: 88 MFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDE 147
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVL---------KAC 111
L + +V + S++ +++G + + EM KG D + C
Sbjct: 148 LKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKC 207
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSW 171
+ L L D +CN+++++Y+K ++ A VF M RD+ SW
Sbjct: 208 SMLHCL----------AIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSW 257
Query: 172 NSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT-------------------------- 205
N++M+ + NG +++++ +SM G E D VT
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIK 317
Query: 206 -----------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSL 254
N+++ Y + G A VFE++ +VIS +++G+++ G +
Sbjct: 318 SGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAF 377
Query: 255 GIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
GI +M + + PD + + C L G+ +HGY +++
Sbjct: 378 GILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRM 422
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 132/318 (41%), Gaps = 27/318 (8%)
Query: 3 LNSLLQACSASKSLN---QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFR 59
L +LL SAS +L Q + H + LI +Y C D+ SA +F
Sbjct: 581 LITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFG 640
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ PN+ ++ +++ S++ R+ + + ++ + P+ F +L A QL +
Sbjct: 641 LISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGS-TS 696
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
+ V +++DMYS CG +E +VF + +WNS++S +
Sbjct: 697 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 756
Query: 180 CNGLSQRAVEVLESMRVDG-CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
+G+ ++A+E+ + + + EP+ + +++ A G + E ++Q+++
Sbjct: 757 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEK------ 810
Query: 239 TLISGYSSVGRHGVSL-------GIFREMVN--DGMVFPDAGALSGVLVS-CRCLGALAS 288
G V H V + G RE G+ P + G L+S C G
Sbjct: 811 ---FGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKL 867
Query: 289 GKEIHGYGLKIMPGEIFY 306
GKE+ ++ P Y
Sbjct: 868 GKEVAEVLFEMEPDNASY 885
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 17/235 (7%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL A + S + Q H +++ G PF + L+ +Y+ C L + +FR +
Sbjct: 685 LLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNS 744
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ A+ S+++ H HG+ + +E + E+ + P+ F +L AC+ + E
Sbjct: 745 ISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYY 804
Query: 125 XXXXXX--XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSMMSCYVCN 181
+ RV ++DM + G + A + E + W +++S CN
Sbjct: 805 KQMEEKFGVKPVTEHRVW--IVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLS--ACN 860
Query: 182 -----GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
L + EVL M D + NT Y +G EA ++ + ++D
Sbjct: 861 YHGDTKLGKEVAEVLFEMEPDNASYYISLANT----YVGLGGWEEAVRLRKMVED 911
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 37/296 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L AC+ S++ Q+H ++ G + F L+ YA+C +L SA +F ++ + NV
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 67 FAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++TS++ ++R A+ ++ + M R + V+P+ V+ ACA+L L
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
DL V ++++DMY KC ++ A R+FDE ++ N+M S YV GL++
Sbjct: 261 FIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 186 RAVEVLESMRVDGCEPDVVTR-----------------------------------NTVM 210
A+ V M G PD ++ N ++
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
D Y + A ++F+++ + V++W ++++GY G + F M +V
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 5/221 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
++ AC+ + L ++++ ++ G + L+ +Y C+ + A LF + N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ + + R GL R+ + + M GV PD + +C+QL +L
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D +CN+++DMY KC + A R+FD M + V +WNS+++ YV NG
Sbjct: 362 YVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 420
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
A E E+M E ++V+ NT++ + L EA +VF
Sbjct: 421 AAWETFETMP----EKNIVSWNTIISGLVQGSLFEEAIEVF 457
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 142/334 (42%), Gaps = 45/334 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC---DDLRSAHSLFRQL 61
S L+ C K++++ K H + G TKL+ + + L A +F
Sbjct: 37 SSLKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 62 PQPNV-FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
F + S++ ++ GL + I + M G+SPD Y FP L ACA+ A
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK-GN 152
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
DL V NS++ Y++CG+++ A +VFDEM ER+V SW SM+ Y
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 181 NGLSQRAVEVLESM-RVDGCEPDVVT------------------------RNT------- 208
++ AV++ M R + P+ VT RN+
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 209 ----VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
++D Y + + A ++F++ N+ + S Y G +LG+F M++ G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
V PD ++ + SC L + GK HGY L+
Sbjct: 333 -VRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 36/314 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC---------------- 48
S + +CS +++ K H Y+L +G LI +Y C
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 49 ---------------DDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMR 93
++ +A F +P+ N+ ++ +I++ + L + IE + M+
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 94 FK-GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD 152
+ GV+ DG + AC L AL + D+R+ +++DM+S+CGD
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGAL-DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 153 VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
E A +F+ + RDV +W + + G ++RA+E+ + M G +PD V + A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTTLISG--YSSVGRHGVSLGIFREMVNDGMVFPDA 270
GLV + ++F + + +S + G +GR G+ L +++ D + P+
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL-LEEAVQLIEDMPMEPND 639
Query: 271 GALSGVLVSCRCLG 284
+ +L +CR G
Sbjct: 640 VIWNSLLAACRVQG 653
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 1/193 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+ AC +L+ AK +++Y+ +G T L+ +++ C D SA S+F L
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V A+T+ + + G A + IE + +M +G+ PDG F L AC+ + +
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMSCYVCNGL 183
+ ++D+ + G +E A ++ ++M E + WNS+++ G
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
Query: 184 SQRAVEVLESMRV 196
+ A E ++V
Sbjct: 655 VEMAAYAAEKIQV 667
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 153/331 (46%), Gaps = 49/331 (14%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKP---FFTTKLIQIYADCDDLRSAHSLFRQL 61
SL + CS ++Q KQLH + L +P F K++Q+ + D+ A +F +
Sbjct: 53 SLAETCS---DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 109
Query: 62 PQPNVFAFTSILAFHSRHGLAR--QCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALL 118
+ F + +++ H ++R + Y +M +G SPD + FP VLKACA +
Sbjct: 110 ENHSSFMWNTLIR-ACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 168
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
E D+ V N ++ +Y CG ++ A +VFDEM ER + SWNSM+
Sbjct: 169 E-GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 179 VCNGLSQRAVEVLESMR----VDG-----------------------------CEP---- 201
V G A+++ M+ DG C+
Sbjct: 228 VRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
DV+ +N++++ YC+ G + A +VF+ ++ ++ SW +I G+++ GR ++ F MV
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 262 ND-GMVFPDAGALSGVLVSCRCLGALASGKE 291
+ V P++ G+L++C G + G++
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQ 378
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+AC+ ++ KQ+H ++ HG + LI +Y C L A +F ++P+ +
Sbjct: 157 VLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS 216
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL--EXXXX 123
+ ++ S++ R G ++ + EM+ + PDGY VL ACA L +L
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHA 275
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V NS+++MY KCG + A +VF M++RD+ SWN+M+ + +G
Sbjct: 276 FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGR 335
Query: 184 SQRAVEVLESM--RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
++ A+ + M + + P+ VT ++ A G V++ + F+ +
Sbjct: 336 AEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM 383
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 41/194 (21%)
Query: 143 VLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM--------------------------- 175
+L + S DV A RVFD + F WN+++
Sbjct: 89 ILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS 148
Query: 176 -----------SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASK 224
+C G S+ +V + G DV N ++ Y G + A K
Sbjct: 149 PDKHTFPFVLKACAYIFGFSE-GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARK 207
Query: 225 VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
VF+++ + +++SW ++I G + +L +FREM PD + VL +C LG
Sbjct: 208 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS--FEPDGYTMQSVLSACAGLG 265
Query: 285 ALASGKEIHGYGLK 298
+L+ G H + L+
Sbjct: 266 SLSLGTWAHAFLLR 279
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 44/284 (15%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR 78
A+Q+H +++ G F +I Y CD++ SA +F ++ + +V ++ S+++ +S+
Sbjct: 151 ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQ 210
Query: 79 HGLARQCIETYAEM----RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXX 134
G C + Y M FK P+G V +AC Q + L+
Sbjct: 211 SGSFEDCKKMYKAMLACSDFK---PNGVTVISVFQACGQSSDLI-FGLEVHKKMIENHIQ 266
Query: 135 XDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM 194
DL +CN+V+ Y+KCG ++ A +FDEM E+D ++ +++S Y+ +G
Sbjct: 267 MDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHG------------ 314
Query: 195 RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSL 254
LV EA +F +++ + +W +ISG H +
Sbjct: 315 -----------------------LVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVI 351
Query: 255 GIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
FREM+ G P+ LS +L S L GKEIH + ++
Sbjct: 352 NSFREMIRCGSR-PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIR 394
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 130/317 (41%), Gaps = 39/317 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+ QAC S L ++H M+ + +I YA C L A +LF ++ +
Sbjct: 239 SVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK 298
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVF-------------------- 104
+ + +I++ + HGL ++ + ++EM G+S +
Sbjct: 299 DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMI 358
Query: 105 -----PKVLKACAQLAAL-----LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
P + + L +L L+ ++ V S++D Y+K G +
Sbjct: 359 RCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLL 418
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYC 214
GA RVFD ++R + +W ++++ Y +G S A + + M+ G +PD VT V+ A+
Sbjct: 419 GAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFA 478
Query: 215 RMGLVSEASKVFEQI-----KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
G A +F+ + +P V + ++S S G+ ++ +M D P
Sbjct: 479 HSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPID----PI 534
Query: 270 AGALSGVLVSCRCLGAL 286
A +L LG L
Sbjct: 535 AKVWGALLNGASVLGDL 551
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+SLL + + S +L K++H + + +G+ + TT +I YA L A +F
Sbjct: 369 LSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK 428
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
++ A+T+I+ ++ HG + + +M+ G PD VL A A
Sbjct: 429 DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAH 479
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 137/324 (42%), Gaps = 39/324 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L++C++ +QLH ++ G +PF T LI +Y C + A +F + PQ +
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSS 118
Query: 66 VFA--FTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ + ++++ ++ + + M+ GVS D ++ C + L
Sbjct: 119 QLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCT-VPEYLWLGRS 177
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
++ V NS + MY KCG VE R+FDEM + + +WN+++S Y NGL
Sbjct: 178 LHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGL 237
Query: 184 SQRAVEVLESMRVDGCEPD-----------------------------------VVTRNT 208
+ +E+ E M+ G PD V N
Sbjct: 238 AYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNA 297
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+ Y R G +++A VF+ + +++SWT +I Y G + L +F +M+ G + P
Sbjct: 298 SISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG-IRP 356
Query: 269 DAGALSGVLVSCRCLGALASGKEI 292
D VL +C G G E+
Sbjct: 357 DGAVFVMVLSACSHSGLTDKGLEL 380
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 10/281 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+ C+ + L + LH + G + I +Y C + + LF ++P
Sbjct: 162 LVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKG 221
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ + ++++ +S++GLA +E Y +M+ GV PD + VL +CA L A +
Sbjct: 222 LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK-KIGHEVG 280
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ V N+ + MY++CG++ A VFD M + + SW +M+ CY +G+ +
Sbjct: 281 KLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGE 340
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
+ + + M G PD V+ A GL + ++F +K +P ++ L
Sbjct: 341 IGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCL 400
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ GR ++ E + V PD +L +C+
Sbjct: 401 VDLLGRAGRLDEAM----EFIESMPVEPDGAVWGALLGACK 437
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
LA+ S L + I Y M G SPD + FP +LK+CA L+ +
Sbjct: 28 LAYQS---LFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGC 84
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS--WNSMMSCYVCNGLSQRAVEV 190
V +++ MY KCG V A +VF+E + S +N+++S Y N A +
Sbjct: 85 ETEPF-VLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYM 143
Query: 191 LESMRVDGCEPDVVTR-----------------------------------NTVMDAYCR 215
M+ G D VT N+ + Y +
Sbjct: 144 FRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMK 203
Query: 216 MGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
G V ++F+++ +I+W +ISGYS G L ++ +M + G V PD L
Sbjct: 204 CGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG-VCPDPFTLVS 262
Query: 276 VLVSCRCLGALASGKEI 292
VL SC LGA G E+
Sbjct: 263 VLSSCAHLGAKKIGHEV 279
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS--WTTLISGYSSVGRHGVSLG 255
GCE + ++ YC+ GLV++A KVFE+ + +S + LISGY++ + +
Sbjct: 83 GCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAY 142
Query: 256 IFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+FR M G V D+ + G++ C L G+ +HG +K
Sbjct: 143 MFRRMKETG-VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK 184
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 37/296 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L AC+ S++ Q+H ++ G + F L+ YA+C +L SA +F ++ + NV
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 67 FAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++TS++ ++R A+ ++ + M R + V+P+ V+ ACA+L L
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
DL V ++++DMY KC ++ A R+FDE ++ N+M S YV GL++
Sbjct: 261 FIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 186 RAVEVLESMRVDGCEPDVVTR-----------------------------------NTVM 210
A+ V M G PD ++ N ++
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
D Y + A ++F+++ + V++W ++++GY G + F M +V
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 5/221 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
++ AC+ + L ++++ ++ G + L+ +Y C+ + A LF + N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ + + R GL R+ + + M GV PD + +C+QL +L
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D +CN+++DMY KC + A R+FD M + V +WNS+++ YV NG
Sbjct: 362 YVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 420
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
A E E+M E ++V+ NT++ + L EA +VF
Sbjct: 421 AAWETFETMP----EKNIVSWNTIISGLVQGSLFEEAIEVF 457
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 138/325 (42%), Gaps = 42/325 (12%)
Query: 14 KSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC---DDLRSAHSLFRQLPQ-PNVFAF 69
K++++ K H + G TKL+ + + L A +F F +
Sbjct: 43 KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMY 102
Query: 70 TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXX 129
S++ ++ GL + I + M G+SPD Y FP L ACA+ A
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK-GNGIQIHGLIV 161
Query: 130 XXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVE 189
DL V NS++ Y++CG+++ A +VFDEM ER+V SW SM+ Y ++ AV+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 190 VLESM-RVDGCEPDVVT------------------------RNT-----------VMDAY 213
+ M R + P+ VT RN+ ++D Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 214 CRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
+ + A ++F++ N+ + S Y G +LG+F M++ G V PD ++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG-VRPDRISM 340
Query: 274 SGVLVSCRCLGALASGKEIHGYGLK 298
+ SC L + GK HGY L+
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLR 365
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 36/314 (11%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC---------------- 48
S + +CS +++ K H Y+L +G LI +Y C
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 49 ---------------DDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMR 93
++ +A F +P+ N+ ++ +I++ + L + IE + M+
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 94 FK-GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD 152
+ GV+ DG + AC L AL + D+R+ +++DM+S+CGD
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGAL-DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 153 VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
E A +F+ + RDV +W + + G ++RA+E+ + M G +PD V + A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTTLISG--YSSVGRHGVSLGIFREMVNDGMVFPDA 270
GLV + ++F + + +S + G +GR G+ L +++ D + P+
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL-LEEAVQLIEDMPMEPND 639
Query: 271 GALSGVLVSCRCLG 284
+ +L +CR G
Sbjct: 640 VIWNSLLAACRVQG 653
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 1/193 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+ AC +L+ AK +++Y+ +G T L+ +++ C D SA S+F L
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V A+T+ + + G A + IE + +M +G+ PDG F L AC+ + +
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMSCYVCNGL 183
+ ++D+ + G +E A ++ ++M E + WNS+++ G
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
Query: 184 SQRAVEVLESMRV 196
+ A E ++V
Sbjct: 655 VEMAAYAAEKIQV 667
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 158/349 (45%), Gaps = 69/349 (19%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDD------------ 50
L ++L + +A++ + K++H +++ G + L+ +YA C D
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 51 -------------------LRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
+ A + F Q+ + ++ + S+++ ++ G + ++ +++
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 92 M-RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
M R +SPD + VL ACA L L + V N+++ MYS+C
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI-VLNALISMYSRC 327
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
G VE A R+ ++ +D ++++G ++
Sbjct: 328 GGVETARRLIEQRGTKD--------------------------LKIEGF-------TALL 354
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y ++G +++A +F +KD +V++WT +I GY G +G ++ +FR MV G P++
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR-PNS 413
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L+ +L L +L+ GK+IHG +K GEI+ S AL+T+YA+
Sbjct: 414 YTLAAMLSVASSLASLSHGKQIHGSAVK--SGEIYSVSVSNALITMYAK 460
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 138/317 (43%), Gaps = 42/317 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+N+L+ S + A++L M L R F ++ Y+ D+ S F QLP
Sbjct: 52 MNNLMNVYSKTGYALHARKLFDEMPL----RTAFSWNTVLSAYSKRGDMDSTCEFFDQLP 107
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
Q + ++T+++ + G + I +M +G+ P + VL + A +E
Sbjct: 108 QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAA-TRCMETGK 166
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V NS+L+MY+KCGD A VFD M RD+ SWN+M++ ++ G
Sbjct: 167 KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVG 226
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
A+ E M E D+VT W ++IS
Sbjct: 227 QMDLAMAQFEQM----AERDIVT-------------------------------WNSMIS 251
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPG 302
G++ G +L IF +M+ D ++ PD L+ VL +C L L GK+IH + + G
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH--IVTTG 309
Query: 303 EIFYRSAGAALLTLYAR 319
AL+++Y+R
Sbjct: 310 FDISGIVLNALISMYSR 326
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 141/326 (43%), Gaps = 42/326 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD------------- 49
L S+L AC+ + L KQ+H +++ G LI +Y+ C
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 50 --------------------DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETY 89
D+ A ++F L +V A+T+++ + +HG + I +
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 90 AEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSK 149
M G P+ Y + + A A L + V N+++ MY+K
Sbjct: 402 RSMVGGGQRPNSYTLA-AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 150 CGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
G++ A+R FD +R ERD SW SM+ +G ++ A+E+ E+M ++G PD +T
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSV----GRHGVSLGIFREMVNDG 264
V A GLV++ + F+ +KD + I T +S Y+ + GR G+ L +E +
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPT--LSHYACMVDLFGRAGL-LQEAQEFIEKM 577
Query: 265 MVFPDAGALSGVLVSCRCLGALASGK 290
+ PD +L +CR + GK
Sbjct: 578 PIEPDVVTWGSLLSACRVHKNIDLGK 603
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 55/266 (20%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP-QPNVFAFTSILAFH 76
KQ+H + G + LI +YA ++ SA F + + + ++TS++
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 77 SRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
++HG A + +E + M +G+ PD + V AC
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC------------------------- 525
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC-------NGLSQRAVE 189
+ G V + FD M++ D +S Y C GL Q A E
Sbjct: 526 -----------THAGLVNQGRQYFDMMKDVDKII--PTLSHYACMVDLFGRAGLLQEAQE 572
Query: 190 VLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQ----IKDPNVISWTTLISGYS 245
+E M + EPDVVT +++ A CR+ + KV + ++ N +++ L + YS
Sbjct: 573 FIEKMPI---EPDVVTWGSLLSA-CRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYS 628
Query: 246 SVGRHGVSLGIFREMVNDGMVFPDAG 271
+ G+ + I R+ + DG V + G
Sbjct: 629 ACGKWEEAAKI-RKSMKDGRVKKEQG 653
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 153/351 (43%), Gaps = 40/351 (11%)
Query: 5 SLLQACSASKSL-NQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
SL+ AC S S+ + Q+H ++ G + +T ++ +Y + + +F ++P
Sbjct: 46 SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD 105
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
NV ++TS++ +S G + I+ Y MR +GV + V+ +C L
Sbjct: 106 RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE-SLGRQ 164
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
L V NS++ M G+V+ A +FD+M ERD SWNS+ + Y NG
Sbjct: 165 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 224
Query: 184 SQRAVEVLESMR--------------------VD---------------GCEPDVVTRNT 208
+ + + MR VD G + V NT
Sbjct: 225 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 284
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++ Y G EA+ VF+Q+ ++ISW +L++ + + GR +LG+ M++ G
Sbjct: 285 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV- 343
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ + L +C G+ +H GL ++ G + + G AL+++Y +
Sbjct: 344 NYVTFTSALAACFTPDFFEKGRILH--GLVVVSGLFYNQIIGNALVSMYGK 392
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 127/293 (43%), Gaps = 11/293 (3%)
Query: 5 SLLQACSASKSL-NQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
S+L AC L + K LH Y++ G LI +YA C DL S+ LF L
Sbjct: 451 SVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 510
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N+ + ++LA ++ HG + ++ ++MR GVS D + F + L A A+L A+LE
Sbjct: 511 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKL-AVLEEGQQ 569
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D + N+ DMYSKCG++ ++ R + SWN ++S +G
Sbjct: 570 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 629
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
+ M G +P VT +++ A GLV + ++ I +P +
Sbjct: 630 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 689
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
+I GR L ++ + P+ +L SC+ G L G++
Sbjct: 690 CVIDLLGRSGR----LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 738
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 130/325 (40%), Gaps = 42/325 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
S L AC + + LH +++ G L+ +Y ++ + + Q+P
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V A+ +++ ++ + + + MR +GVS + VL AC LLE
Sbjct: 408 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 467
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V NS++ MY+KCGD+ + +F+ + R++ +WN+M++ +G
Sbjct: 468 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 527
Query: 183 LSQRAVEVLESMR-----VD------------------------------GCEPDVVTRN 207
+ ++++ MR +D G E D N
Sbjct: 528 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFN 587
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV---SLGIFREMVNDG 264
D Y + G + E K+ + ++ SW LI S++GRHG F EM+ G
Sbjct: 588 AAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILI---SALGRHGYFEEVCATFHEMLEMG 644
Query: 265 MVFPDAGALSGVLVSCRCLGALASG 289
+ P +L +C G + G
Sbjct: 645 -IKPGHVTFVSLLTACSHGGLVDKG 668
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 123/295 (41%), Gaps = 38/295 (12%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
L+++YA A+ +F+Q+P ++ ++ S++A G + + M G S +
Sbjct: 285 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 344
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
F L AC E + + N+++ MY K G++ + RV
Sbjct: 345 YVTFTSALAACFT-PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 403
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT--------------- 205
+M RDV +WN+++ Y + +A+ ++MRV+G + +T
Sbjct: 404 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 463
Query: 206 ---------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY 244
+N+++ Y + G +S + +F + + N+I+W +++
Sbjct: 464 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 523
Query: 245 SSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+ G L + +M + G+ D + S L + L L G+++HG +K+
Sbjct: 524 AHHGHGEEVLKLVSKMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 577
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 153/351 (43%), Gaps = 40/351 (11%)
Query: 5 SLLQACSASKSL-NQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
SL+ AC S S+ + Q+H ++ G + +T ++ +Y + + +F ++P
Sbjct: 63 SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD 122
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
NV ++TS++ +S G + I+ Y MR +GV + V+ +C L
Sbjct: 123 RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE-SLGRQ 181
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
L V NS++ M G+V+ A +FD+M ERD SWNS+ + Y NG
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 184 SQRAVEVLESMR--------------------VD---------------GCEPDVVTRNT 208
+ + + MR VD G + V NT
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 301
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++ Y G EA+ VF+Q+ ++ISW +L++ + + GR +LG+ M++ G
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV- 360
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ + L +C G+ +H GL ++ G + + G AL+++Y +
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILH--GLVVVSGLFYNQIIGNALVSMYGK 409
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 127/293 (43%), Gaps = 11/293 (3%)
Query: 5 SLLQACSASKSL-NQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
S+L AC L + K LH Y++ G LI +YA C DL S+ LF L
Sbjct: 468 SVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 527
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N+ + ++LA ++ HG + ++ ++MR GVS D + F + L A A+L A+LE
Sbjct: 528 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKL-AVLEEGQQ 586
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D + N+ DMYSKCG++ ++ R + SWN ++S +G
Sbjct: 587 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 646
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWT 238
+ M G +P VT +++ A GLV + ++ I +P +
Sbjct: 647 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 706
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
+I GR L ++ + P+ +L SC+ G L G++
Sbjct: 707 CVIDLLGRSGR----LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 755
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 130/325 (40%), Gaps = 42/325 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
S L AC + + LH +++ G L+ +Y ++ + + Q+P
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V A+ +++ ++ + + + MR +GVS + VL AC LLE
Sbjct: 425 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 484
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V NS++ MY+KCGD+ + +F+ + R++ +WN+M++ +G
Sbjct: 485 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 544
Query: 183 LSQRAVEVLESMR-----VD------------------------------GCEPDVVTRN 207
+ ++++ MR +D G E D N
Sbjct: 545 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFN 604
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV---SLGIFREMVNDG 264
D Y + G + E K+ + ++ SW LI S++GRHG F EM+ G
Sbjct: 605 AAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILI---SALGRHGYFEEVCATFHEMLEMG 661
Query: 265 MVFPDAGALSGVLVSCRCLGALASG 289
+ P +L +C G + G
Sbjct: 662 -IKPGHVTFVSLLTACSHGGLVDKG 685
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 123/295 (41%), Gaps = 38/295 (12%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
L+++YA A+ +F+Q+P ++ ++ S++A G + + M G S +
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
F L AC E + + N+++ MY K G++ + RV
Sbjct: 362 YVTFTSALAACFT-PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT--------------- 205
+M RDV +WN+++ Y + +A+ ++MRV+G + +T
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480
Query: 206 ---------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY 244
+N+++ Y + G +S + +F + + N+I+W +++
Sbjct: 481 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 540
Query: 245 SSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI 299
+ G L + +M + G+ D + S L + L L G+++HG +K+
Sbjct: 541 AHHGHGEEVLKLVSKMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 594
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 145/330 (43%), Gaps = 55/330 (16%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+LL+ C+ K L Q + +H ++L L+ +YA C L A +F ++PQ
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACA---------QL 114
+ +T++++ +S+H + + +M G SP+ + V+KA A QL
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
++ V +++LD+Y++ G ++ A VFD + R+ SWN++
Sbjct: 184 HGFC----------VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPD-------------------------------- 202
++ + +++A+E+ + M DG P
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 203 ---VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
NT++D Y + G + +A K+F+++ +V+SW +L++ Y+ G ++ F E
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASG 289
M G + P+ + VL +C G L G
Sbjct: 354 MRRVG-IRPNEISFLSVLTACSHSGLLDEG 382
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 14/295 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S+++A +A + QLH + + G + L+ +Y + A +F L
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
N ++ +++A H+R + +E + M G P + + + AC+ LE
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS-TGFLEQGK 282
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
N++LDMY+K G + A ++FD + +RDV SWNS+++ Y +G
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 342
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWT 238
+ AV E MR G P+ ++ +V+ A GL+ E +E +K P +
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV 402
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC-----LGALAS 288
T++ G +L EM + P A +L +CR LGA A+
Sbjct: 403 TVVDLLGRAGDLNRALRFIEEMP----IEPTAAIWKALLNACRMHKNTELGAYAA 453
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D+ + N++L+MY+KCG +E A +VF++M +RD +W +++S Y + A+ M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 196 VDGCEPDVVTRNTV-----------------------------------MDAYCRMGLVS 220
G P+ T ++V +D Y R GL+
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+A VF+ ++ N +SW LI+G++ +L +F+ M+ DG P + + + +C
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR-PSHFSYASLFGAC 272
Query: 281 RCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G L GK +H Y +K GE AG LL +YA+
Sbjct: 273 SSTGFLEQGKWVHAYMIK--SGEKLVAFAGNTLLDMYAK 309
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 22/290 (7%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
N L++C KS+ + ++H ++ G T L++ Y+ + A +F ++P
Sbjct: 110 FNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMP 169
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ ++ ++ S GL Q + Y M +GV D Y +L +CA ++AL
Sbjct: 170 VRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSAL----- 224
Query: 123 XXXXXXXXXXXXXDLR------VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS 176
D+R V N+++DMY+KCG +E A VF+ MR+RDV +WNSM+
Sbjct: 225 --NMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMII 282
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----- 231
Y +G A+ M G P+ +T ++ GLV E + FE +
Sbjct: 283 GYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLT 342
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
PNV + ++ Y G+ SL EM+ D +L SC+
Sbjct: 343 PNVKHYGCMVDLYGRAGQLENSL----EMIYASSCHEDPVLWRTLLGSCK 388
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 139/326 (42%), Gaps = 46/326 (14%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYAD--CDDLRSAHSLFRQL-P 62
+LQ C++ K L +++H +++++G P L++ A L A LF
Sbjct: 11 MLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLAALLEXX 121
P+ + ++ S I Y M VS PD + F LK+C ++ ++
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI-PKC 126
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D V S++ YS G VE A++VFDEM RD+ SWN M+ C+
Sbjct: 127 LEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHV 186
Query: 182 GLSQRAVEVLESMRVDG-----------------------------------CEPDVVTR 206
GL +A+ + + M +G CE V
Sbjct: 187 GLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVS 246
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV-SLGIFREMVNDGM 265
N ++D Y + G + A VF ++ +V++W ++I GY G HGV ++ FR+MV G
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG-HGVEAISFFRKMVASG- 304
Query: 266 VFPDAGALSGVLVSCRCLGALASGKE 291
V P+A G+L+ C G + G E
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVE 330
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 112/239 (46%), Gaps = 44/239 (18%)
Query: 86 IETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLD 145
I Y MR VSPD + FP +L + L D V S+L+
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHN-PLHLPLGQRTHAQILLFGLDKDPFVRTSLLN 105
Query: 146 MYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT 205
MYS CGD+ A RVFD+ +D+ +WNS
Sbjct: 106 MYSSCGDLRSAQRVFDDSGSKDLPAWNS-------------------------------- 133
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM----V 261
V++AY + GL+ +A K+F+++ + NVISW+ LI+GY G++ +L +FREM
Sbjct: 134 ---VVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP 190
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
N+ V P+ +S VL +C LGAL GK +H Y K + +I G AL+ +YA+
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVL---GTALIDMYAK 246
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 48/316 (15%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAH-------------------- 55
L ++ H +LL G + PF T L+ +Y+ C DLRSA
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 56 -----------SLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-----VSP 99
LF ++P+ NV +++ ++ + G ++ ++ + EM+ V P
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
+ + VL AC +L AL E D+ + +++DMY+KCG +E A RV
Sbjct: 198 NEFTMSTVLSACGRLGAL-EQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 160 FDEM-RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV-DGCEPDVVTRNTVMDAYCRMG 217
F+ + ++DV ++++M+ C GL+ ++ M D P+ VT ++ A G
Sbjct: 257 FNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRG 316
Query: 218 LVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
L++E F+ + + P++ + ++ Y GR G+ + + + PD
Sbjct: 317 LINEGKSYFKMMIEEFGITPSIQHYGCMVDLY---GRSGL-IKEAESFIASMPMEPDVLI 372
Query: 273 LSGVLVSCRCLGALAS 288
+L R LG + +
Sbjct: 373 WGSLLSGSRMLGDIKT 388
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 10/198 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL- 61
++++L AC +L Q K +H Y+ + T LI +YA C L A +F L
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK-GVSPDGYVFPKVLKACAQLAALLEX 120
+ +V A+++++ + +GL +C + ++EM ++P+ F +L AC + E
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMS--- 176
++ ++D+Y + G ++ A M E DV W S++S
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 177 ----CYVCNGLSQRAVEV 190
C G +R +E+
Sbjct: 382 MLGDIKTCEGALKRLIEL 399
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 39/314 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
LQ C+ +++L AK LH +++ G + L+ +Y C A +F ++P +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXXX 125
A+ S+L ++ L+ + + ++ + + PD +VF ++KACA L ++ +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSI-DHGRQVH 128
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D V +S++DMY+KCG + A VFD +R ++ SW +M+S Y +G +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYS 245
A+E+ + V N+ SWT LISG+
Sbjct: 189 EALELFRILPVK-----------------------------------NLYSWTALISGFV 213
Query: 246 SVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIF 305
G+ + +F EM + + D LS ++ +C L A +G+++HG + +
Sbjct: 214 QSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCV 273
Query: 306 YRSAGAALLTLYAR 319
+ S AL+ +YA+
Sbjct: 274 FIS--NALIDMYAK 285
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 146/319 (45%), Gaps = 42/319 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHS------ 56
++L++AC+ S++ +Q+H + ++ + L+ +YA C L SA +
Sbjct: 108 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR 167
Query: 57 -------------------------LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
LFR LP N++++T++++ + G + + E
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTE 227
Query: 92 MRFKGVSP-DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
MR + V D V ++ ACA LAA + + + N+++DMY+KC
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSC-VFISNALIDMYAKC 286
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
DV A +F MR RDV SW S++ +G +++A+ + + M G +P+ VT ++
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 211 DAYCRMGLVSEASKVFEQI-KD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
A +G V + ++F+ + KD P++ +T L+ +GR G+ L +++
Sbjct: 347 YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLL---DLLGRSGL-LDEAENLIHTMP 402
Query: 266 VFPDAGALSGVLVSCRCLG 284
PD + +L +C+ G
Sbjct: 403 FPPDEPTWAALLSACKRQG 421
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 105/237 (44%), Gaps = 7/237 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S++ AC+ + +Q+H ++ G F + LI +YA C D+ +A +F ++
Sbjct: 241 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 300
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V ++TS++ ++HG A + + Y +M GV P+ F ++ AC+ + + +
Sbjct: 301 HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE 360
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCN 181
L+ +LD+ + G ++ A + M D +W +++S
Sbjct: 361 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 420
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCR---MGLVSEASKVFEQI---KDP 232
G Q + + + + D T + + Y G VSEA + ++ KDP
Sbjct: 421 GRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDP 477
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 18/286 (6%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
+ Q H +L G+ + + KLI Y++ + A + + +P P +++F+S++ +
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
+ L Q I ++ M G+ PD +V P + K CA+L+A + D
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA-FKVGKQIHCVSCVSGLDMDA 151
Query: 138 RVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
V S+ MY +CG + A +VFD M ++DV + ++++ Y G + V +L M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVS 253
G E ++V+ N ++ + R G EA +F++I P+ ++ ++++ SVG
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL---PSVGD---- 264
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLGALAS--GKEIHGYGL 297
EM+N G + G+L + A+ GK H YG+
Sbjct: 265 ----SEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGI 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 149/336 (44%), Gaps = 50/336 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++S+L + S+ LN + +H Y++ G + + +I +Y + SLF Q
Sbjct: 255 VSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFE 314
Query: 63 -----------------------------------QPNVFAFTSILAFHSRHGLARQCIE 87
+ NV ++TSI+A +++G + +E
Sbjct: 315 MMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALE 374
Query: 88 TYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMY 147
+ EM+ GV P+ P +L AC +AAL ++ V ++++DMY
Sbjct: 375 LFREMQVAGVKPNHVTIPSMLPACGNIAAL-GHGRSTHGFAVRVHLLDNVHVGSALIDMY 433
Query: 148 SKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRN 207
+KCG + + VF+ M +++ WNS+M+ + +G ++ + + ES+ +PD ++
Sbjct: 434 AKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFT 493
Query: 208 TVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVN 262
+++ A ++GL E K F+ + + P + ++ +++ G+ + + +EM
Sbjct: 494 SLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPF 553
Query: 263 DGMVFPDAGALSGVLVSCRC-----LGALASGKEIH 293
+ PD+ +L SCR L +A+ K H
Sbjct: 554 E----PDSCVWGALLNSCRLQNNVDLAEIAAEKLFH 585
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 136/352 (38%), Gaps = 70/352 (19%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L + C+ + KQ+H + G F + +Y C + A +F ++
Sbjct: 119 LPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS 178
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS------------------------ 98
+V +++L ++R G + + +EM G+
Sbjct: 179 DKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVV 238
Query: 99 -----------PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMY 147
PD VL + + +L D V ++++DMY
Sbjct: 239 MFQKIHHLGFCPDQVTVSSVLPSVGD-SEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY 297
Query: 148 SKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRN 207
K G V G +F++ + N+ ++ NGL +A+E+ E +
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFK------------ 345
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
EQ + NV+SWT++I+G + G+ +L +FREM G V
Sbjct: 346 -------------------EQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG-VK 385
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
P+ + +L +C + AL G+ HG+ +++ + + G+AL+ +YA+
Sbjct: 386 PNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH--VGSALIDMYAK 435
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 96/234 (41%), Gaps = 16/234 (6%)
Query: 5 SLLQACSASKSLNQAKQLHHYM----LLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
S+L AC +L + H + LL H + LI +YA C + + +F
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVH----VGSALIDMYAKCGRINLSQIVFNM 448
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+P N+ + S++ S HG A++ + + + + PD F +L AC Q+ E
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMM-SCY 178
L + ++++ + G ++ A + EM E D W +++ SC
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 179 VCNG--LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
+ N L++ A E L + + V+ N Y G+ +E + +++
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNI----YAAKGMWTEVDSIRNKME 618
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 154/340 (45%), Gaps = 46/340 (13%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
+++H Y++ G ++ +YAD D L SA LF ++ + +V +++ ++ +
Sbjct: 143 DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYV 201
Query: 78 RHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
+ ++ + EM + PD VLKAC + + D
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 261
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVE-----VL 191
+ VCNS++DMYSK DV+ A RVFDE R++ SWNS+++ +V N A+E V
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ 321
Query: 192 ESMRVD------------------------------GCEPDVVTRNTVMDAYCRMGLVSE 221
E++ VD G E + V ++++DAY LV +
Sbjct: 322 EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDD 381
Query: 222 ASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
A V + + +V+S +T+ISG + GR ++ IF M + P+A + +L +C
Sbjct: 382 AGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT----PNAITVISLLNACS 437
Query: 282 CLGALASGKEIHGYGLK--IMPGEIFYRSAGAALLTLYAR 319
L + K HG ++ + +I S G +++ YA+
Sbjct: 438 VSADLRTSKWAHGIAIRRSLAINDI---SVGTSIVDAYAK 474
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 116/264 (43%), Gaps = 53/264 (20%)
Query: 68 AFTSILAFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLAALLEXXXXXXX 126
A +S + S G R+ + Y+E++ GV D +VFP V KACA+L+ L +
Sbjct: 11 ALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG------ 64
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
NS+ D Y KCGD+ R FD M RD SWN ++ + G +
Sbjct: 65 --------------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEE 110
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDA-------------------YCRMGLVSE------ 221
+ +RV G EP+ T V+ A +C + V
Sbjct: 111 GLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMY 170
Query: 222 -------ASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
A K+F+++ + +VISW+ +I Y V L +F+EMV++ PD ++
Sbjct: 171 ADSDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVT 230
Query: 275 GVLVSCRCLGALASGKEIHGYGLK 298
VL +C + + G+ +HG+ ++
Sbjct: 231 SVLKACTVMEDIDVGRSVHGFSIR 254
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 9/281 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL+ C + K +H ++ G + LI Y C + A ++ +
Sbjct: 333 SLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYK 392
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + +++++ + G + + I + MR +P+ +L AC+ A L
Sbjct: 393 DVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAH 449
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V S++D Y+KCG +E A R FD++ E+++ SW ++S Y NGL
Sbjct: 450 GIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLP 509
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF----EQIKDPNVISWTTL 240
+A+ + + M+ G P+ VT + A GLV + +F E+ P++ ++ +
Sbjct: 510 DKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCI 569
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ S G ++ + + + D V A A +L CR
Sbjct: 570 VDMLSRAGEIDTAVELIKNLPED--VKAGASAWGAILSGCR 608
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 142/348 (40%), Gaps = 56/348 (16%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L++C+A L QLH + L T + +YA CD+++ A LF
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N ++ +++ +S+ + + + + G+ D V +ACA + L E
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ V N+ +DMY KC + A RVFDEMR RD SWN++++ + NG
Sbjct: 406 GLAIKSSLSL-DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG 464
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVM---------------------------------- 210
+ + SM EPD T +++
Sbjct: 465 YETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLI 524
Query: 211 DAYCRMGLVSEASKV----------------FEQIKDPNV----ISWTTLISGYSSVGRH 250
D Y + G++ EA K+ E++ + + +SW ++ISGY +
Sbjct: 525 DMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQS 584
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+ +F M+ G+ PD + VL +C L + GK+IH +K
Sbjct: 585 EDAQMLFTRMMEMGIT-PDKFTYATVLDTCANLASAGLGKQIHAQVIK 631
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 41/331 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
LN LLQ + S+ A + M L R K+I Y+ +D+ A+S F +P
Sbjct: 86 LNCLLQVYTNSRDFVSASMVFDKMPL----RDVVSWNKMINGYSKSNDMFKANSFFNMMP 141
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V ++ S+L+ + ++G + + IE + +M +G+ DG F +LK C+ L
Sbjct: 142 VRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDT-SLGM 200
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN- 181
D+ +++LDMY+K + RVF + E++ SW+++++ V N
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 260
Query: 182 -----------------GLSQ-------RAVEVLESMRVDG----------CEPDVVTRN 207
G+SQ R+ L +R+ G D + R
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+D Y + + +A +F+ ++ N S+ +I+GYS +L +F +++ G+ F
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 380
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
D +LSGV +C + L+ G +I+G +K
Sbjct: 381 -DEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 27/281 (9%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSA---HSLFRQL 61
S+L+AC+ SL ++H ++ G LI +Y+ C + A HS F Q
Sbjct: 488 SILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 546
Query: 62 P-----------------QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVF 104
Q ++ SI++ + + + M G++PD + +
Sbjct: 547 ANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTY 606
Query: 105 PKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR 164
VL CA LA+ D+ +C++++DMYSKCGD+ + +F++
Sbjct: 607 ATVLDTCANLASA-GLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 665
Query: 165 ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASK 224
RD +WN+M+ Y +G + A+++ E M ++ +P+ VT +++ A MGL+ + +
Sbjct: 666 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 225 VFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREM 260
F +K DP + ++ ++ G+ +L + REM
Sbjct: 726 YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 148/350 (42%), Gaps = 42/350 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ CS + + Q+H ++ G + L+ +YA + +F+ +P+ N
Sbjct: 186 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 245
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++++I+A ++ L ++ + EM+ ++ VL++CA L+ L
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL-RLGGQLH 304
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS--------- 176
D V + LDMY+KC +++ A +FD + S+N+M++
Sbjct: 305 AHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGF 364
Query: 177 ---------------------------CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
C + GLS+ +++ DV N
Sbjct: 365 KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE-GLQIYGLAIKSSLSLDVCVANAA 423
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+D Y + ++EA +VF++++ + +SW +I+ + G+ +L +F M+ + PD
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPD 482
Query: 270 AGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+L +C G+L G EIH +K G S G +L+ +Y++
Sbjct: 483 EFTFGSILKACTG-GSLGYGMEIHSSIVK--SGMASNSSVGCSLIDMYSK 529
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 104 FPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
F V K CA+ AL E V N +L +Y+ D A+ VFD+M
Sbjct: 51 FSFVFKECAKQGAL-ELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 164 RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEAS 223
RDV SW N +++ Y + + +A+
Sbjct: 110 PLRDVVSW-----------------------------------NKMINGYSKSNDMFKAN 134
Query: 224 KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
F + +V+SW +++SGY G S+ +F +M +G+ F D + +L C L
Sbjct: 135 SFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF-DGRTFAIILKVCSFL 193
Query: 284 GALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ G +IHG +++ G A +ALL +YA+
Sbjct: 194 EDTSLGMQIHGIVVRV--GCDTDVVAASALLDMYAK 227
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 19/313 (6%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+AC K L + +H ++ L+++Y + A +F + + NV
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+ S+++ S+ + + +M+ + + +L AC+++AALL
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALL-TGKEIHA 361
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQR 186
D+ + NS++DMY KCG+VE + RVFD M +D+ SWN M++CY NG +
Sbjct: 362 QILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEE 421
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLI 241
+ + E M G PD +T ++ GL +FE++K P + + L+
Sbjct: 422 VINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLV 481
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK---------EI 292
G+ ++ + M P A +L SCR G ++ G+ E
Sbjct: 482 DILGRAGKIKEAVKVIETMPFK----PSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEP 537
Query: 293 HGYGLKIMPGEIF 305
H G +M I+
Sbjct: 538 HNPGNYVMVSNIY 550
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 130/323 (40%), Gaps = 41/323 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHR-KPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
LL AC ++KSL+ ++ +L + S R P +KLI +++ C L A +F +
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 65 NVFA---FTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
++ + ++ +SR+G R + Y +M + P + LKAC L L
Sbjct: 197 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKD-LRVG 255
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D V N +L +Y + G + A +VFD M ER+V +WNS++S
Sbjct: 256 RGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKK 315
Query: 182 GLSQRAVEVLESMR--------------VDGC---------------------EPDVVTR 206
+ M+ + C +PDV
Sbjct: 316 VRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLL 375
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
N++MD Y + G V + +VF+ + ++ SW +++ Y+ G + +F M+ G V
Sbjct: 376 NSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG-V 434
Query: 267 FPDAGALSGVLVSCRCLGALASG 289
PD +L C G G
Sbjct: 435 APDGITFVALLSGCSDTGLTEYG 457
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 10/245 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I Y + +A +F ++P+ ++ ++T+++ + G + + + EM+ GV PD
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
L AC L AL ++RV NS++D+Y +CG VE A +VF
Sbjct: 206 YVAIIAALNACTNLGAL-SFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
M +R V SWNS++ + NG + ++ M+ G +PD VT + A +GLV
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 221 EASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
E + F+ +K P + + L+ YS GR +L + + M + P+ +
Sbjct: 325 EGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMP----MKPNEVVIGS 380
Query: 276 VLVSC 280
+L +C
Sbjct: 381 LLAAC 385
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 117/298 (39%), Gaps = 69/298 (23%)
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
Q ++TS + +R+G + + +++M GV P+ F +L C + E
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSE 89
Query: 120 XXXXXXXXXX--XXXXXXDLRVCNSVLDMYSK---------------------------- 149
+ V +++ MYSK
Sbjct: 90 ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDG 149
Query: 150 ---CGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVV-- 204
G V+ AA++FD+M ERD+ SW +M++ +V G + A+ M++ G +PD V
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 205 ---------------------------------TRNTVMDAYCRMGLVSEASKVFEQIKD 231
N+++D YCR G V A +VF ++
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
V+SW ++I G+++ G SL FR+M G PDA +G L +C +G + G
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK-PDAVTFTGALTACSHVGLVEEG 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 67/157 (42%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L AC+ +L+ +H Y+L + LI +Y C + A +F + + V
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++ S++ + +G A + + + +M+ KG PD F L AC+ + + E
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ ++D+YS+ G +E A ++ M
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 35/280 (12%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG 80
QLH + G + + T L+ +Y+ C + A +F ++P +V + + ++ +G
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 81 LARQCIETYAEMR-FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
+ + MR F P+ F + ACA L L + + V
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNL-QYGRQLHGLVMKKEFQFETMV 268
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
+++DMYSKC + A VF E+++ R++ SWNS++S + NG + AVE+ E + +G
Sbjct: 269 GTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG 328
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
+PD T N+++ + ++G V EA K FE+
Sbjct: 329 LKPDSATWNSLISGFSQLGKVIEAFKFFER------------------------------ 358
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
M++ MV P L+ +L +C + L +GKEIHG+ +K
Sbjct: 359 -MLSVVMV-PSLKCLTSLLSACSDIWTLKNGKEIHGHVIK 396
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 37/262 (14%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP-N 65
+ AC++ +L +QLH ++ + T LI +Y+ C +SA+ +F +L N
Sbjct: 238 ITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRN 297
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ S+++ +G +E + ++ +G+ PD + ++ +QL ++E
Sbjct: 298 LISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFE 357
Query: 126 XXXX----------------------------------XXXXXXDLRVCNSVLDMYSKCG 151
D+ V S++DMY KCG
Sbjct: 358 RMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCG 417
Query: 152 DVEGAARVFD--EMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
A R+FD E + +D WN M+S Y +G + A+E+ E +R + EP + T V
Sbjct: 418 LSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAV 477
Query: 210 MDAYCRMGLVSEASKVFEQIKD 231
+ A G V + S++F +++
Sbjct: 478 LSACSHCGNVEKGSQIFRLMQE 499
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 37/255 (14%)
Query: 98 SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
SP+ + FP +LK+CA+L +++ D+ +++ MY K V A
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFV-DVFTATALVSMYMKVKQVTDAL 86
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV-------- 209
+V DEM ER + S N+ +S + NG + A + RV G + VT +V
Sbjct: 87 KVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIE 146
Query: 210 ---------------MDAYCRMGLVSE---------ASKVFEQIKDPNVISWTTLISGYS 245
M+ Y LVS A+++FE++ +V+++ ISG
Sbjct: 147 GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLM 206
Query: 246 SVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEI- 304
G + +F M P+ + +C L L G+++HG +M E
Sbjct: 207 ENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGL---VMKKEFQ 263
Query: 305 FYRSAGAALLTLYAR 319
F G AL+ +Y++
Sbjct: 264 FETMVGTALIDMYSK 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 2/163 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL- 61
L SLL ACS +L K++H +++ + R F T LI +Y C A +F +
Sbjct: 371 LTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFE 430
Query: 62 PQPNVFAFTSIL-AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
P+P F +++ + + +HG IE + +R + V P F VL AC+ + +
Sbjct: 431 PKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKG 490
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
++D+ + G + A V D+M
Sbjct: 491 SQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 150/325 (46%), Gaps = 40/325 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD----DLRSAHSLFRQL 61
L + +++ Q+H + G R ++++ A D DL AH +F Q+
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIET---YAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
PQ N F++ +I+ S + I Y M + V P+ + FP VLKACA+ +
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
E + V ++++ MY CG ++ A +F +
Sbjct: 146 EGKQIHGLALKYGFGGDEF-VMSNLVRMYVMCGFMKDARVLFYK---------------- 188
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
N + + V + + + DG ++V N ++D Y R+G A +F++++ +V+SW
Sbjct: 189 --NIIEKDMVVMTDRRKRDG---EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWN 243
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY--- 295
T+ISGYS G ++ +FREM G + P+ L VL + LG+L G+ +H Y
Sbjct: 244 TMISGYSLNGFFKDAVEVFREM-KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAED 302
Query: 296 -GLKIMPGEIFYRSAGAALLTLYAR 319
G++I ++ G+AL+ +Y++
Sbjct: 303 SGIRI--DDVL----GSALIDMYSK 321
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 156/364 (42%), Gaps = 58/364 (15%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD--------------- 49
S+L+AC+ + + + KQ+H L +G F + L+++Y C
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 50 ------------------------------DLRSAHSLFRQLPQPNVFAFTSILAFHSRH 79
D ++A LF ++ Q +V ++ ++++ +S +
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 80 GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
G + +E + EM+ + P+ VL A ++L +L E D +
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL-ELGEWLHLYAEDSGIRIDDVL 311
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
++++DMYSKCG +E A VF+ + +V +W++M++ + +G + A++ MR G
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSL 254
P V ++ A GLV E + F Q+ +P + + ++ +GR G+ L
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMV---DLLGRSGL-L 427
Query: 255 GIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALL 314
E + + + PD +L +CR G + GK + + ++P + A AL
Sbjct: 428 DEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHD---SGAYVALS 484
Query: 315 TLYA 318
+YA
Sbjct: 485 NMYA 488
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L A S SL + LH Y G + LI +Y+ C + A +F +LP
Sbjct: 277 LVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP 336
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
+ NV +++++ + HG A I+ + +MR GV P + +L AC+
Sbjct: 337 RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 387
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 150/320 (46%), Gaps = 49/320 (15%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ +L+ACS + Q+H ++ G F LI +Y C L + +F ++P
Sbjct: 124 LSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMP 183
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + ++ S++ DGYV ++ + +L L+
Sbjct: 184 KRDSVSYNSMI--------------------------DGYVKCGLIVSARELFDLMPMEM 217
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGD-VEGAARVFDEMRERDVFSWNSMMSCYVCN 181
+L NS++ Y++ D V+ A+++F +M E+D+ SWNSM+ YV +
Sbjct: 218 K------------NLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKH 265
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLI 241
G + A + + M DVVT T++D Y ++G V A +F+Q+ +V+++ +++
Sbjct: 266 GRIEDAKGLFDVMP----RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMM 321
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
+GY H +L IF +M + + PD L VL + LG L+ ++H Y ++
Sbjct: 322 AGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVE--- 378
Query: 302 GEIFYRSA--GAALLTLYAR 319
+ FY G AL+ +Y++
Sbjct: 379 -KQFYLGGKLGVALIDMYSK 397
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 15/283 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NS++ + AK L M R +I YA + A +LF Q+P
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVM----PRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPH 311
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXX 122
+V A+ S++A + ++ + +E +++M + + PD VL A AQL L +
Sbjct: 312 RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAID 371
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ +++DMYSKCG ++ A VF+ + + + WN+M+ +G
Sbjct: 372 MHLYIVEKQFYLGG-KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 430
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISW 237
L + A ++L + +PD +T V++A GLV E FE ++ +P + +
Sbjct: 431 LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 490
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
++ S G S+ + + ++ + V P+ L +C
Sbjct: 491 GCMVDILSRSG----SIELAKNLIEEMPVEPNDVIWRTFLTAC 529
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 144/340 (42%), Gaps = 51/340 (15%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
H++ +L C S SL ++ + ++ G F +KLI YA + +F +
Sbjct: 28 HISVIL--CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLV 85
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ ++F + SI+ H +G + + + M G SPD + P V+ ACA+L
Sbjct: 86 TRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGT 145
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
+ V S + YSKCG ++ A VFDEM +RDV +W +++S +V N
Sbjct: 146 FVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQN 205
Query: 182 GLSQRAVEVLESMRVDGCEPD--------------------------------------V 203
G S+ + L M G + D
Sbjct: 206 GESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSK 265
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
++++ Y + G SEA F ++ D ++ SWT++I+ + G S +F EM N
Sbjct: 266 FVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNK 325
Query: 264 GMVFPDAGALSGVLVSCRC--LGAL---ASGKEIHGYGLK 298
GM PD GV++SC LG + GK HG+ ++
Sbjct: 326 GM-HPD-----GVVISCLINELGKMMLVPQGKAFHGFVIR 359
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 155/350 (44%), Gaps = 43/350 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
QACS +L + + LH + + +G F + + Y+ + A+ FR+L ++
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
F++TSI+A +R G + + + EM+ KG+ PDG V ++ ++ L+
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKM-MLVPQGKAFHG 355
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNGLSQ 185
D VCNS+L MY K + A ++F + E + +WN+M+ Y
Sbjct: 356 FVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHV 415
Query: 186 RAVEVLESMRVDGCEPD-----------------------------------VVTRNTVM 210
+ +E+ ++ G E D + N+++
Sbjct: 416 KCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLI 475
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y +MG ++ A ++F + D NVI+W +I+ Y + ++ +F MV++ P +
Sbjct: 476 DLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFK-PSS 533
Query: 271 GALSGVLVSCRCLGALASGKEIHGYGLKIMPGE-IFYRSAGAALLTLYAR 319
L +L++C G+L G+ IH Y I E S AAL+ +YA+
Sbjct: 534 ITLVTLLMACVNTGSLERGQMIHRY---ITETEHEMNLSLSAALIDMYAK 580
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 6/250 (2%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
S++ +CS ++ K LH Y++ LI +Y DL A +F +
Sbjct: 437 TSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-AD 495
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
NV + +++A + + + I + M + P +L AC +L E
Sbjct: 496 TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSL-ERGQM 554
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+L + +++DMY+KCG +E + +FD ++D WN M+S Y +G
Sbjct: 555 IHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGD 614
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTT 239
+ A+ + + M +P T ++ A GLV + K+F ++ PN+ ++
Sbjct: 615 VESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSC 674
Query: 240 LISGYSSVGR 249
L+ S G
Sbjct: 675 LVDLLSRSGN 684
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 5/234 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +LL AC + SL + + +H Y+ + LI +YA C L + LF
Sbjct: 536 LVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN 595
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
Q + + +++ + HG I + +M V P G F +L AC A L+E
Sbjct: 596 QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTH-AGLVEQGK 654
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCN 181
+L+ + ++D+ S+ G++E A M D W +++S + +
Sbjct: 655 KLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTH 714
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNV 234
G + + + E R +P ++ + Y G EA + E +++ V
Sbjct: 715 GEFEMGIRMAE--RAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGV 766
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 10/268 (3%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I +A C + A +LF ++PQ N ++ S+++ R+G + ++ + EM+ K V PD
Sbjct: 198 MIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPD 257
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
G+ +L ACA L A E + V +++DMY KCG +E VF
Sbjct: 258 GFTMVSLLNACAYLGAS-EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF 316
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
+ ++ + WNSM+ NG +RA+++ + G EPD V+ V+ A G V
Sbjct: 317 ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 221 EASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
A + F +K +P++ +T +++ G + + + M V D S
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMP----VEEDTVIWSS 432
Query: 276 VLVSCRCLGALASGKEIHGYGLKIMPGE 303
+L +CR +G + K K+ P E
Sbjct: 433 LLSACRKIGNVEMAKRAAKCLKKLDPDE 460
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 131/312 (41%), Gaps = 51/312 (16%)
Query: 10 CSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL------PQ 63
C++ +N A + + +H+ PF +I+ ++ A S+F + +
Sbjct: 68 CASPSDMNYA----YLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVK 123
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
P + S+ + R G AR + + + +G+ D ++ +L L+E
Sbjct: 124 PQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRI 183
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ NS++ ++KCG ++ A +FDEM +R+ SWNSM+S +V NG
Sbjct: 184 FLGMIGF-----DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGR 238
Query: 184 SQRAVEVLESMRVDGCEPD-------------------------VVTRN----------T 208
+ A+++ M+ +PD + RN
Sbjct: 239 FKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTA 298
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D YC+ G + E VFE + W ++I G ++ G ++ +F E+ G+ P
Sbjct: 299 LIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLE-P 357
Query: 269 DAGALSGVLVSC 280
D+ + GVL +C
Sbjct: 358 DSVSFIGVLTAC 369
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 40/284 (14%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIY-ADCDDLRSAHSLFRQLPQPNVFAFTSIL 73
++ + KQ+H ++ G ++++ A D+ A+ +F ++ N F + +I+
Sbjct: 37 TMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTII 96
Query: 74 AFHSRHGLARQCIETYAEM--RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXX 131
SR I + +M V P +P V KA +L +
Sbjct: 97 RGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEG 156
Query: 132 XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVL 191
D + N++L MY CG + A R+F M DV +WN
Sbjct: 157 LED-DSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWN------------------- 196
Query: 192 ESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHG 251
+++ + + GL+ +A +F+++ N +SW ++ISG+ GR
Sbjct: 197 ----------------SMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFK 240
Query: 252 VSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+L +FREM + V PD + +L +C LGA G+ IH Y
Sbjct: 241 DALDMFREM-QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEY 283
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 10/223 (4%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL AC+ + Q + +H Y++ + T LI +Y C + ++F P+
Sbjct: 263 SLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK 322
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ + S++ + +G + ++ ++E+ G+ PD F VL ACA +
Sbjct: 323 QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF 382
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNG- 182
++ ++++ G +E A + M E D W+S++S G
Sbjct: 383 RLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGN 442
Query: 183 --LSQRAVEVLESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEA 222
+++RA + L+ + +PD ++ +AY GL EA
Sbjct: 443 VEMAKRAAKCLKKL-----DPDETCGYVLLSNAYASYGLFEEA 480
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 146/326 (44%), Gaps = 39/326 (11%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
+++SL+ A + S+ + LH ++ S+R F +L+ Y A LF ++
Sbjct: 33 NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK--GVSPDGYVFPKVLKACAQLAALLE 119
P+ ++ ++ S+++ +S G +C E + M G P+ F ++ AC E
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACV-YGGSKE 151
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
+++V N+ ++ Y K GD+ + ++F+++ +++ SWN+M+ ++
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVT---------------------------------- 205
NGL+++ + R G EPD T
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 206 -RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
++D Y ++G + ++S VF +I P+ ++WT +++ Y++ G ++ F MV+ G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 265 MVFPDAGALSGVLVSCRCLGALASGK 290
+ PD + +L +C G + GK
Sbjct: 332 -ISPDHVTFTHLLNACSHSGLVEEGK 356
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 12/237 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L++C + A+ +H ++ G TT L+ +Y+ L + ++F ++ P
Sbjct: 240 AVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSP 299
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ A+T++LA ++ HG R I+ + M G+SPD F +L AC+ + E
Sbjct: 300 DSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYF 359
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMSC---YVC 180
L + ++D+ + G ++ A + EM E W +++ Y
Sbjct: 360 ETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD 419
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVM--DAYCRMGLVSEASKVFEQIKDPNVI 235
L +A E L + EP RN VM + Y GL +AS++ +K ++
Sbjct: 420 TQLGTKAAERLFEL-----EPR-DGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLV 470
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 138/343 (40%), Gaps = 50/343 (14%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQI--YADCDDLRSAHSLFRQLPQ 63
L+ CS+ K L Q+H + L F ++L+++ + DL A +L
Sbjct: 19 FLKLCSSIKHL---LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSD 75
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ + +S + I Y+EM+ +G+ P+ FP +LKACA L
Sbjct: 76 STPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLG-LTAGRQ 134
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D+ V N+++ +Y C A +VFDEM ER+V SWNS+M+ V NG
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 184 SQRAVEVLESMRVDGCEPDVVTR---------------------------------NTVM 210
E M PD T ++
Sbjct: 195 LNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
D Y + G + A VFE++ D NV +W+ +I G + G +L +F +M+ + V P+
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNY 314
Query: 271 GALSGVLVSCRCLGALASG-------KEIHGYGLKIMPGEIFY 306
GVL +C G + G ++IH KI P I Y
Sbjct: 315 VTFLGVLCACSHTGLVDDGYKYFHEMEKIH----KIKPMMIHY 353
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 13/281 (4%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL+AC++ L +Q+ +L HG + LI +Y C A +F ++ + N
Sbjct: 119 LLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERN 178
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++ SI+ +G E + EM K PD +L AC L
Sbjct: 179 VVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC---GGNLSLGKLVH 235
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
+ R+ +++DMY+K G +E A VF+ M +++V++W++M+ G ++
Sbjct: 236 SQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAE 295
Query: 186 RAVEVLES-MRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTT 239
A+++ M+ P+ VT V+ A GLV + K F +++ P +I +
Sbjct: 296 EALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGA 355
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
++ GR + ++M + PDA +L +C
Sbjct: 356 MVDILGRAGRLNEAYDFIKKMPFE----PDAVVWRTLLSAC 392
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 10/266 (3%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
+I++Y C + A +F ++ ++ ++ S+ S++G + +E + +M + D
Sbjct: 390 MIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTD 449
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
V+ ACA +++L E D V +S++D+Y KCG VE RVF
Sbjct: 450 EVSLSSVISACASISSL-ELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVF 508
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
D M + D WNSM+S Y NG A+++ + M V G P +T V+ A GLV
Sbjct: 509 DTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVE 568
Query: 221 EASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
E K+FE +K P+ ++ ++ + G ++ + EM D D S
Sbjct: 569 EGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFD----VDGSMWSS 624
Query: 276 VLVSCRCLGALASGKEIHGYGLKIMP 301
+L C G A GK+ +++ P
Sbjct: 625 ILRGCVANGYKAMGKKAAEKIIELEP 650
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 150/387 (38%), Gaps = 100/387 (25%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L ++L+AC+ ++L KQ+H +L+ G + L+ +YA C DLR A + Q+
Sbjct: 190 LTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR 249
Query: 63 QPN-------------------------------VFAFTSILAFHSRHGLARQCIETYAE 91
+P+ V + S+++ + + + + + + E
Sbjct: 250 EPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNE 309
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
MR + D V+ AC L LE D+ V +++LDMYSKCG
Sbjct: 310 MRNE-TREDSRTLAAVINACIGLG-FLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Query: 152 D-------------------------------VEGAARVFDEMRERDVFSWNSMMSCYVC 180
++ A RVF+ + + + SWNSM + +
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 181 NGLSQRAVEVLESMR-----------------------------------VDGCEPDVVT 205
NG + +E M + G + D V
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVV 487
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
++++D YC+ G V +VF+ + + + W ++ISGY++ G+ ++ +F++M G
Sbjct: 488 SSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG- 546
Query: 266 VFPDAGALSGVLVSCRCLGALASGKEI 292
+ P VL +C G + G+++
Sbjct: 547 IRPTQITFMVVLTACNYCGLVEEGRKL 573
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 153/378 (40%), Gaps = 108/378 (28%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTK-LIQIYADCDDLRSAHSLFRQLPQP 64
LLQ+CS+ +Q + +L G L+Q+Y+ + A +LF ++P
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP--DGYVFPKVLKACAQLAALLEXXX 122
N F++ +++ + G E +RF + P DGY +
Sbjct: 92 NYFSWNTMIEGYMNSG------EKGTSLRFFDMMPERDGYSW------------------ 127
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
N V+ ++K G++ A R+F+ M E+DV + NS++ Y+ NG
Sbjct: 128 ------------------NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNG 169
Query: 183 LSQRAVEV----------------------LESMR----------VDGCEPDVVTRNTVM 210
++ A+ + LE+++ + G E D ++++
Sbjct: 170 YAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLV 229
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF--- 267
+ Y + G + AS + EQI++P+ S + LISGY++ GR S G+F N ++
Sbjct: 230 NVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNS 289
Query: 268 --------------------------PDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
D+ L+ V+ +C LG L +GK++H + K
Sbjct: 290 MISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKF-- 347
Query: 302 GEIFYRSAGAALLTLYAR 319
G I + LL +Y++
Sbjct: 348 GLIDDIVVASTLLDMYSK 365
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
Query: 142 SVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP 201
S+++ Y D+ A R FD ERD+ WN+M+S Y+ G A + + M C
Sbjct: 64 SMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP---CR- 119
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
DV++ NTV++ Y +G + +VF+ + + NV SW LI GY+ GR LG F+ MV
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYG 296
++G V P+ ++ VL +C LGA GK +H YG
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSP 99
+++ YA+ D+ + +F +P+ NVF++ ++ ++++G + + ++ M +G V P
Sbjct: 127 VLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVP 186
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
+ VL ACA+L A D+ V N+++DMY KCG +E A V
Sbjct: 187 NDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEV 246
Query: 160 FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
F ++ RD+ SWN+M++ +G A+ + M+ G PD VT V+ A MGLV
Sbjct: 247 FKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLV 306
Query: 220 SEASKVFEQI 229
+ F +
Sbjct: 307 EDGLAYFNSM 316
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 57/281 (20%)
Query: 51 LRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP--DGYVFPKVL 108
+ SA+ +F ++ + NV +TS++ + + L + + + R+ +SP D ++ ++
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMI---NGYLLNKDLV---SARRYFDLSPERDIVLWNTMI 97
Query: 109 KACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV 168
++ +LE D+ N+VL+ Y+ GD+E RVFD+M ER+V
Sbjct: 98 SGYIEMGNMLEARSLFDQMPCR-----DVMSWNTVLEGYANIGDMEACERVFDDMPERNV 152
Query: 169 FSWNSMMSCYVCNGLSQRAVEVLESMR------------------VDGC----------- 199
FSWN ++ Y NG R EVL S + + C
Sbjct: 153 FSWNGLIKGYAQNG---RVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Query: 200 -----------EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG 248
+ DV +N ++D Y + G + A +VF+ IK ++ISW T+I+G ++ G
Sbjct: 210 VHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHG 269
Query: 249 RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
+L +F EM N G + PD GVL +C+ +G + G
Sbjct: 270 HGTEALNLFHEMKNSG-ISPDKVTFVGVLCACKHMGLVEDG 309
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 124/254 (48%), Gaps = 9/254 (3%)
Query: 32 HRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
+ F + ++ Y D+ A ++F ++ ++ + +++A ++++G + I+ +
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
M+ +G PD +L ACAQ + L+ + V N+++DMY+KCG
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQ-SGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCG 323
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
D+E A VF+ + R V NSM+SC +G + A+E+ +M +PD +T V+
Sbjct: 324 DLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLT 383
Query: 212 AYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
A G + E K+F ++K PNV + LI +GR G +R +V + V
Sbjct: 384 ACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLI---HLLGRSGKLKEAYR-LVKEMHVK 439
Query: 268 PDAGALSGVLVSCR 281
P+ L +L +C+
Sbjct: 440 PNDTVLGALLGACK 453
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 67/290 (23%)
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
F ++++ H G Q + Y +R +GV G+V P +L+ACA + +
Sbjct: 12 FHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHS 70
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS-- 184
D+ V +S++ MY KCG V A +VFDEM ER+V +WN+M+ Y+ NG +
Sbjct: 71 ESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVL 130
Query: 185 ------------------------------QRAVEVLESMRVDGCEPDVVTRNTVMDAYC 214
++A E+ E M + +V + ++ Y
Sbjct: 131 ASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE--LKNVKAWSVMLGVYV 188
Query: 215 RMGLVSEASKVFEQIKDPN-------------------------------VISWTTLISG 243
+ +A K FE I + N ++ W TLI+G
Sbjct: 189 NNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAG 248
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
Y+ G ++ F M +G PDA +S +L +C G L G+E+H
Sbjct: 249 YAQNGYSDDAIDAFFNMQGEGYE-PDAVTVSSILSACAQSGRLDVGREVH 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++S+L AC+ S L+ +++H + G F + LI +YA C DL +A S+F +
Sbjct: 277 VSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESIS 336
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+V S+++ + HG ++ +E ++ M + PD F VL AC L+E
Sbjct: 337 VRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLME 393
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 134/349 (38%), Gaps = 64/349 (18%)
Query: 6 LLQACS-ASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+L+AC+ + K LH + G + LI +Y C + SA +F ++P+
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 65 NVFAFTSILAFHSRHG---LARQCIE---------TYAEMRFKGVSPDGYV--------- 103
NV + +++ + +G LA E T+ EM KG +
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEM-IKGYGKRIEIEKARELFER 169
Query: 104 FPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNS-----VLDMYSKCGDVEGAAR 158
P LK + +L D+ N+ ++ Y + GDV A
Sbjct: 170 MPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARA 229
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT------------- 205
+F + RD+ WN++++ Y NG S A++ +M+ +G EPD VT
Sbjct: 230 IFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGR 289
Query: 206 ----------------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISG 243
N ++D Y + G + A+ VFE I +V ++IS
Sbjct: 290 LDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISC 349
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ G+ +L +F M + + PD VL +C G L G +I
Sbjct: 350 LAIHGKGKEALEMFSTMESLDLK-PDEITFIAVLTACVHGGFLMEGLKI 397
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%)
Query: 44 IYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYV 103
IY+ + L L QP+ ++ +A SR + IE + M + PD Y
Sbjct: 488 IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYT 547
Query: 104 FPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
F +L C++L L D VCN ++DMY KCG + +VF+E
Sbjct: 548 FVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEET 607
Query: 164 RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEAS 223
RE+++ +W +++SC +G Q A+E + G +PD V+ +++ A G+V E
Sbjct: 608 REKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGM 667
Query: 224 KVFEQIKDPNV 234
+F+++KD V
Sbjct: 668 GLFQKMKDYGV 678
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 126/306 (41%), Gaps = 41/306 (13%)
Query: 12 ASKSLNQAKQLHHYMLLHGSHR-KPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFT 70
AS + QLH L +G F T L+ +Y D L A +F +P ++ +
Sbjct: 125 ASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWN 184
Query: 71 SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
+++ G ++C+ + E+ G S F VLK + + L +
Sbjct: 185 HMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDL-DISKQLHCSATK 243
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV 190
++ V NS++ Y KCG+ A R+F + D+ SWN+++ + +A+++
Sbjct: 244 KGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKL 303
Query: 191 LESMR-----------------------------------VDGCEPDVVTRNTVMDAYCR 215
SM +GCE +V N ++D Y +
Sbjct: 304 FVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAK 363
Query: 216 MGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHG-VSLGIFREMVNDGMVFPDAGALS 274
G + ++ F+ I+D N++ W L+SGY++ + G + L +F +M+ G P S
Sbjct: 364 CGNLEDSRLCFDYIRDKNIVCWNALLSGYAN--KDGPICLSLFLQMLQMGFR-PTEYTFS 420
Query: 275 GVLVSC 280
L SC
Sbjct: 421 TALKSC 426
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 144/354 (40%), Gaps = 46/354 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHY-MLLHGSHRKPFFT-TKLIQIYADCDDLRSAHSLFRQLP 62
SLL C + S + K LH + L +P + +I +Y ++ A +F Q+P
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ N +F +I+ +S++G + ++EMR+ G P+ +L +CA L +
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGTQ 134
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V +L +Y + +E A +VF++M + + +WN MMS G
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 183 LSQ-------------------------RAVEVLESMRVD----------GCEPDVVTRN 207
+ + V ++ + + G + ++ N
Sbjct: 195 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+++ AY + G A ++F+ +++SW +I + +L +F M G
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS- 313
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLK--IMPGEIFYRSAGAALLTLYAR 319
P+ G VL + L+ G++IHG +K G + G AL+ YA+
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVL----GNALIDFYAK 363
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 140/372 (37%), Gaps = 71/372 (19%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L S + L+ +Q+H ++ +G LI YA C +L + F +
Sbjct: 321 SVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDK 380
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACA-----QLAALL- 118
N+ + ++L+ ++ C+ + +M G P Y F LK+C QL +++
Sbjct: 381 NIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIV 439
Query: 119 ---------------------EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
+ + N V +YS+ G +
Sbjct: 440 RMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESV 499
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD--------------- 202
++ + + D SWN ++ + + +E+ + M PD
Sbjct: 500 KLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLC 559
Query: 203 ----------VVTR-----------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLI 241
++T+ N ++D Y + G + KVFE+ ++ N+I+WT LI
Sbjct: 560 DLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALI 619
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG----KEIHGYGL 297
S G +L F+E ++ G PD + +L +CR G + G +++ YG+
Sbjct: 620 SCLGIHGYGQEALEKFKETLSLGFK-PDRVSFISILTACRHGGMVKEGMGLFQKMKDYGV 678
Query: 298 KIMPGEIFYRSA 309
+ P YR A
Sbjct: 679 E--PEMDHYRCA 688
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 132/351 (37%), Gaps = 64/351 (18%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L+ S K L+ +KQLH G + LI Y C + A +F+ +
Sbjct: 221 VLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWD 280
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ +I+ ++ + ++ + M G SP+ + VL + L LL
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVL-GVSSLVQLLSCGRQIH 339
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY------V 179
+ + N+++D Y+KCG++E + FD +R++++ WN+++S Y +
Sbjct: 340 GMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI 399
Query: 180 CNGL-------SQRAVEVLESMRVDGC-----------------EPDVVTRNTVMDAYCR 215
C L R E S + C E + +++M +Y +
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK 459
Query: 216 MGLVSEA--------------------------SKVFEQIK------DPNVISWTTLISG 243
L+++A + E +K P+ +SW I+
Sbjct: 460 NQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAA 519
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
S H + +F+ M+ + PD +L C L L G IHG
Sbjct: 520 CSRSDYHEEVIELFKHMLQSN-IRPDKYTFVSILSLCSKLCDLTLGSSIHG 569
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 47/301 (15%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYAD-------CDDLRSAHSL 57
+LLQ+CS S + K +H ++L F ++L+ + D + L A+ +
Sbjct: 17 ALLQSCS---SFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 58 FRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
F Q+ PN+F F ++ S + Y +M + PD FP ++KA +++ +
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
L D+ V NS++ MY+ CG + A R+F +M RDV SW SM++
Sbjct: 134 L-VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISW 237
Y C+ G+V A ++F+++ N+ +W
Sbjct: 193 Y-----------------------------------CKCGMVENAREMFDEMPHRNLFTW 217
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
+ +I+GY+ ++ +F M +G+V + + V+ SC LGAL G+ + Y +
Sbjct: 218 SIMINGYAKNNCFEKAIDLFEFMKREGVV-ANETVMVSVISSCAHLGALEFGERAYEYVV 276
Query: 298 K 298
K
Sbjct: 277 K 277
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 123/268 (45%), Gaps = 10/268 (3%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T ++ Y C + +A +F ++P N+F ++ ++ ++++ + I+ + M+ +GV
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
+ V V+ +CA L AL E +L + +++DM+ +CGD+E A
Sbjct: 247 ANETVMVSVISSCAHLGAL-EFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
VF+ + E D SW+S++ +G + +A+ M G P VT V+ A GL
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 219 VSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
V + +++E +K +P + + ++ G+ + +M V P+A L
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM----HVKPNAPIL 421
Query: 274 SGVLVSCRCLGALASGKEIHGYGLKIMP 301
+L +C+ + + +K+ P
Sbjct: 422 GALLGACKIYKNTEVAERVGNMLIKVKP 449
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 157/419 (37%), Gaps = 108/419 (25%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
LN L+ S LN A+QL + S T ++ Y D+ A +F + P
Sbjct: 52 LNRLIDVYCKSSELNYARQLFDEI----SEPDKIARTTMVSGYCASGDITLARGVFEKAP 107
Query: 63 --QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ + +++ S + I + +M+ +G PD + F VL A +A +
Sbjct: 108 VCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQ 167
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD----VEGAARVFDEMRERDVFSWNSMMS 176
V N+++ +YSKC + A +VFDE+ E+D SW +MM+
Sbjct: 168 CVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMT 227
Query: 177 CYVCN--------------------------------GLSQRAVEVLESMRVDGCEPDVV 204
YV N G Q A+E++ M G E D
Sbjct: 228 GYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 205 TRNTVMDA----------------------------------YCRMGLVSEASKVFEQIK 230
T +V+ A Y + G EA +FE++
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 231 DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV-------------FPDAG------ 271
+++SW L+SGY S G G + IF+EM ++ F + G
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 272 -----------ALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
A SG + SC LGA +G++ H LKI G SAG AL+T+YA+
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI--GFDSSLSAGNALITMYAK 464
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 136/325 (41%), Gaps = 50/325 (15%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPF---FTTKLIQIYADCDDLRSAHSLFRQL 61
S+++AC+ + L KQ+H Y+L R+ F F L+ +Y C A ++F ++
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVL----RREDFSFHFDNSLVSLYYKCGKFDEARAIFEKM 346
Query: 62 PQPNVFAFTSILAFH-------------------------------SRHGLARQCIETYA 90
P ++ ++ ++L+ + + +G + ++ ++
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406
Query: 91 EMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
M+ +G P Y F +K+CA L A L N+++ MY+KC
Sbjct: 407 CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDS-SLSAGNALITMYAKC 465
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
G VE A +VF M D SWN++++ +G AV+V E M G PD +T TV+
Sbjct: 466 GVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVL 525
Query: 211 DAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
A GLV + K F+ ++ P + LI G+ + E V + +
Sbjct: 526 TACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDA-----ESVIESL 580
Query: 266 VF-PDAGALSGVLVSCRCLGALASG 289
F P A +L CR G + G
Sbjct: 581 PFKPTAEIWEALLSGCRVHGNMELG 605
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 111/292 (38%), Gaps = 67/292 (22%)
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX- 123
+ A+ ++++ + G ++ +E M G+ D + +P V++ACA A LL+
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT-AGLLQLGKQV 308
Query: 124 -----------------------------XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
DL N++L Y G +
Sbjct: 309 HAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP------DVVTRNT 208
A +F EM+E+++ SW M+S NG + +++ M+ +G EP +
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 209 VMDAYC-----------------------------RMGLVSEASKVFEQIKDPNVISWTT 239
V+ AYC + G+V EA +VF + + +SW
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
LI+ G ++ ++ EM+ G + PD L VL +C G + G++
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKG-IRPDRITLLTVLTACSHAGLVDQGRK 539
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 139/292 (47%), Gaps = 19/292 (6%)
Query: 5 SLLQACSASKS-LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+LL + ++S S + A+QL M S R T ++ YA D+ +A +LF +P+
Sbjct: 166 ALLHSYASSVSHITLARQLFDEM----SERNVVSWTAMLSGYARSGDISNAVALFEDMPE 221
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V ++ +ILA +++GL + + + M + P+ VL ACAQ L +
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL-QLAK 280
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V NS++D+Y KCG++E A+ VF ++ + +WNSM++C+ +G
Sbjct: 281 GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHG 340
Query: 183 LSQRAVEVLESM---RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNV 234
S+ A+ V E M ++ +PD +T +++A GLVS+ F+ + +P +
Sbjct: 341 RSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRI 400
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
+ LI GR +L + M D +L +C+ G L
Sbjct: 401 EHYGCLIDLLGRAGRFDEALEVMSTMKMKA----DEAIWGSLLNACKIHGHL 448
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 146/365 (40%), Gaps = 80/365 (21%)
Query: 3 LNSLLQAC-SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD----DLRSAHSL 57
LN + A S S+ LN KQ+ +M++ G F KL++ C +L A +
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRF---CTLRLCNLSYARFI 79
Query: 58 FRQLPQPNVFAFTSIL-AFHSRHGL-ARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQL 114
F + PN + ++L A+ S L A + M + V P+ +++P VLK+ L
Sbjct: 80 FDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYL 139
Query: 115 A-------------------------ALLEXXXXXXXXXXXXXXXXD------LRVCNSV 143
+ ALL D + ++
Sbjct: 140 SSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAM 199
Query: 144 LDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM--------- 194
L Y++ GD+ A +F++M ERDV SWN++++ NGL AV + M
Sbjct: 200 LSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPN 259
Query: 195 ------RVDGC---------------------EPDVVTRNTVMDAYCRMGLVSEASKVFE 227
+ C DV N+++D Y + G + EAS VF+
Sbjct: 260 EVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFK 319
Query: 228 QIKDPNVISWTTLISGYSSVGRHGVSLGIFREM--VNDGMVFPDAGALSGVLVSCRCLGA 285
++ +W ++I+ ++ GR ++ +F EM +N + PD G+L +C G
Sbjct: 320 MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGL 379
Query: 286 LASGK 290
++ G+
Sbjct: 380 VSKGR 384
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 133/310 (42%), Gaps = 31/310 (10%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
Q +Q+ ++ G R + T L+ +Y + SA LF ++P+ + + +++ +S
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
R+G + + M +G SP +L C Q + D
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQ-CGFVSQGRSVHGVAAKSGLELDS 186
Query: 138 RVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
+V N+++ YSKC ++ A +F EM+++ SWN+M+ Y +GL + A+ V ++M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 198 GCE-----------------------------PDVVTRNTVMDAYCRMGLVSEASKVFEQ 228
E D+ +++ AY R G + A +++
Sbjct: 247 NVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYAS 306
Query: 229 IKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALAS 288
K +++ T+++S Y+ G +++ F + M DA AL G+L C+ +
Sbjct: 307 AKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKI-DAVALVGILHGCKKSSHIDI 365
Query: 289 GKEIHGYGLK 298
G +HGY +K
Sbjct: 366 GMSLHGYAIK 375
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 2/225 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L C S ++ LH Y + G K LI +Y+ DD+ + LF QL
Sbjct: 350 LVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ 409
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXX 121
+ + ++ S+++ + G A E + +M G + PD +L C+QL L
Sbjct: 410 ETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCL-NLG 468
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
+ VC +++DMY+KCG+ A VF ++ +WNSM+S Y +
Sbjct: 469 KELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLS 528
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
GL RA+ MR G +PD +T V+ A G V E F
Sbjct: 529 GLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICF 573
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 134/331 (40%), Gaps = 42/331 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +LL C ++Q + +H G LI Y+ C +L SA LFR++
Sbjct: 154 LVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMK 213
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ +++ +S+ GL + I + M K V +L A L
Sbjct: 214 DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL----- 268
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V S++ YS+CG + A R++ ++ + S++SCY G
Sbjct: 269 --HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKG 326
Query: 183 LSQRAVEVLES-----MRVD---------GCEPD---------------------VVTRN 207
AV M++D GC+ + N
Sbjct: 327 DMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN 386
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
++ Y + V +FEQ+++ +ISW ++ISG GR + +F +M+ G +
Sbjct: 387 GLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLL 446
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
PDA ++ +L C L L GKE+HGY L+
Sbjct: 447 PDAITIASLLAGCSQLCCLNLGKELHGYTLR 477
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 38/288 (13%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T L+ Y+ C L SA L+ Q ++ TSI++ ++ G + +++ R +
Sbjct: 285 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 344
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
D +L C + ++ ++ V N ++ MYSK DVE
Sbjct: 345 IDAVALVGILHGCKK-SSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLF 403
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG-CEPDVVT------------ 205
+F++++E + SWNS++S V +G + A EV M + G PD +T
Sbjct: 404 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 463
Query: 206 -------------RNT----------VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
RN ++D Y + G +A VF+ IK P +W ++IS
Sbjct: 464 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
GYS G +L + EM G+ PD GVL +C G + GK
Sbjct: 524 GYSLSGLQHRALSCYLEMREKGLK-PDEITFLGVLSACNHGGFVDEGK 570
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
N + +V + G + V + ++++ Y + G V+ A +F+++ + + + W L
Sbjct: 63 NSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNAL 122
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIM 300
I GYS G + +F M+ G P A L +L C G ++ G+ +HG K
Sbjct: 123 ICGYSRNGYECDAWKLFIVMLQQGFS-PSATTLVNLLPFCGQCGFVSQGRSVHGVAAK-- 179
Query: 301 PGEIFYRSAGAALLTLYAR 319
G AL++ Y++
Sbjct: 180 SGLELDSQVKNALISFYSK 198
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 151/353 (42%), Gaps = 40/353 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLH-GSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L LL+ ++ S+ + +H ++ S PF LI +Y+ D SA + R
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P NV ++TS+++ +++G + + EMR +GV P+ + FP KA A L L
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASL-RLPVTG 127
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D+ V S DMY K + A ++FDE+ ER++ +WN+ +S V +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 182 GLSQRAVEV-LESMRVD----------------------------------GCEPDVVTR 206
G + A+E +E R+D G + DV
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
N ++D Y + + + +F ++ N +SW +L++ Y + ++ D +V
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD-IV 306
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+S VL +C + L G+ IH + +K + G+AL+ +Y +
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIF--VGSALVDMYGK 357
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 3/228 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+ L ACS LN QLH +L G LI Y C +RS+ +F ++
Sbjct: 214 AFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK 273
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N ++ S++A + ++ + Y R V ++ VL ACA +A L E
Sbjct: 274 NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGL-ELGRSI 332
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V ++++DMY KCG +E + + FDEM E+++ + NS++ Y G
Sbjct: 333 HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQV 392
Query: 185 QRAVEVLESMRVDGC--EPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
A+ + E M GC P+ +T +++ A R G V K+F+ ++
Sbjct: 393 DMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 142/329 (43%), Gaps = 45/329 (13%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQ--IYADCDDLRSAHSLF 58
+++ +++Q C S +Q KQL + L G + F ++L++ + DL A +F
Sbjct: 4 VYMETMIQKCV---SFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIF 60
Query: 59 RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP------DGYVFPKVLKACA 112
R +P+P + +I+ + Y M + S D LKACA
Sbjct: 61 RYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACA 120
Query: 113 QLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWN 172
+ A D +C ++LD YSK GD+ A ++FDEM RDV SWN
Sbjct: 121 R-ALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWN 179
Query: 173 SMMSCYVCNGLSQRAVEVLESMRVDG-------------------------------CEP 201
++++ V + A+E+ + M +G
Sbjct: 180 ALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND 239
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREM 260
+V+ N +D Y + G V +A +VFEQ +V++W T+I+G++ G +L IF ++
Sbjct: 240 NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL 299
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASG 289
++G + PD + L +CR G + G
Sbjct: 300 EDNG-IKPDDVSYLAALTACRHAGLVEYG 327
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 6/224 (2%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+AC+ + + QLH + G T L+ Y+ DL SA+ LF ++P +V
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDV 175
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
++ +++A A + +E Y M +G+ L AC+ L + E
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHG 235
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNGLSQ 185
++ V N+ +DMYSKCG V+ A +VF++ ++ V +WN+M++ + +G +
Sbjct: 236 YSND-----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAH 290
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
RA+E+ + + +G +PD V+ + A GLV VF +
Sbjct: 291 RALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNM 334
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 121/247 (48%), Gaps = 12/247 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
++ YA ++ A F + P+ + ++ SI+A + ++ ++ ++ + M +G PD
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ +L A L L D+ V N+++ MYS+CG++ + R+F
Sbjct: 409 PHTLTSLLSASTGLVNL--RLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIF 466
Query: 161 DEMR-ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
DEM+ +R+V +WN+M+ Y +G + A+ + SM+ +G P +T +V++A GLV
Sbjct: 467 DEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLV 526
Query: 220 SEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
EA F + +P + +++L++ S G+ ++ I M + PD
Sbjct: 527 DEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFE----PDKTVWG 582
Query: 275 GVLVSCR 281
+L +CR
Sbjct: 583 ALLDACR 589
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 8/179 (4%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
NS++ Y K GDV A +FD+M++RD SWN+M+ YV + A + M
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM----PN 340
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
D + N ++ Y +G V A FE+ + + +SW ++I+ Y + ++ +F M
Sbjct: 341 RDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM 400
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+G PD L+ +L + L L G ++H +K + ++ AL+T+Y+R
Sbjct: 401 NIEGEK-PDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDV---PVHNALITMYSR 455
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 24/178 (13%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV-CNGLSQRAVEVLESMRVDGC 199
N+++ Y K ++ A ++FD M +RDV +WN+M+S YV C G+ R +E + +
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGI--RFLEEARKLFDEMP 132
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
D + NT++ Y + + EA +FE++ + N +SW+ +I+G+ G ++ +FR+
Sbjct: 133 SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 260 M-VNDGMVFPDAGALSGVLVSCRC---------LGALASGKE---------IHGYGLK 298
M V D P ++G++ + R G+L SG+E I GYG +
Sbjct: 193 MPVKDSS--PLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQR 248
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
R N L+ + G + A +F+++ R+ +WN+M+S YV +A ++ + M
Sbjct: 40 FRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM-- 97
Query: 197 DGCEPDVVTRNTVMDAYCRMG---LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVS 253
+ DVVT NT++ Y G + EA K+F+++ + SW T+ISGY+ R G +
Sbjct: 98 --PKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEA 155
Query: 254 LGIFREM 260
L +F +M
Sbjct: 156 LLLFEKM 162
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 36/190 (18%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D N ++ Y+ G+VE A F++ E+ SWNS+++ Y N + AV++ M
Sbjct: 342 DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMN 401
Query: 196 VDGCE----------------------------------PDVVTRNTVMDAYCRMGLVSE 221
++G + PDV N ++ Y R G + E
Sbjct: 402 IEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIME 461
Query: 222 ASKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+ ++F+++K VI+W +I GY+ G +L +F M ++G ++P VL +C
Sbjct: 462 SRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNG-IYPSHITFVSVLNAC 520
Query: 281 RCLGALASGK 290
G + K
Sbjct: 521 AHAGLVDEAK 530
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 41/261 (15%)
Query: 9 ACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFA 68
+C + L +A++L M R F +I YA + A LF ++P+ N +
Sbjct: 114 SCGGIRFLEEARKLFDEM----PSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVS 169
Query: 69 FTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL------EXXX 122
+++++ ++G + + +M K SP CA +A L+ E
Sbjct: 170 WSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----------LCALVAGLIKNERLSEAAW 219
Query: 123 XXXXXXXXXXXXXDLRVC-NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
DL N+++ Y + G VE A +FD++ + +C
Sbjct: 220 VLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPD-------------LCG 266
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLI 241
E E C+ +VV+ N+++ AY ++G V A +F+Q+KD + ISW T+I
Sbjct: 267 --DDHGGEFRERF----CK-NVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMI 319
Query: 242 SGYSSVGRHGVSLGIFREMVN 262
GY V R + +F EM N
Sbjct: 320 DGYVHVSRMEDAFALFSEMPN 340
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL C +QLH + + G KL+ Y+ + L A ++
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ + ++ + R+ ++ + Y M KG+ D + +P V+KACA ALL+
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA---ALLDFAYGR 204
Query: 125 XXXXXXXXXXX--DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+L VCN+++ MY + G V+ A R+FD M ERD SWN++++CY
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTV 209
A ++L+ M + G E +VT NT+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTI 291
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 2/226 (0%)
Query: 7 LQACSASKSLNQAKQLHHYML--LHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
L+ACS +L K H ++ SH LI +Y+ C DLR A +F+Q+
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ + SI++ + + + + EM G P+ +L A++ L
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
L + NS++DMY+K G++ A RVFD MR+RD ++ S++ Y G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
+ A+ + M G +PD VT V+ A LV E +F +++
Sbjct: 507 EVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 38/210 (18%)
Query: 108 LKACAQLAALLEXXXXXXXXXXXXXXXXDL-RVCNSVLDMYSKCGDVEGAARVFDEMRER 166
LKAC+ + AL D+ V NS++ MYS+C D+ A VF ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 167 DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT--------------------- 205
+ +WNS++S + N S+ +L+ M + G P+ +T
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 206 ---------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRH 250
N+++D Y + G + A +VF+ ++ + +++T+LI GY +G+
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
V+L F++M G + PD + VL +C
Sbjct: 507 EVALAWFKDMDRSG-IKPDHVTMVAVLSAC 535
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SLL C +QLH + + G KL+ Y+ + L A ++
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ + ++ + R+ ++ + Y M KG+ D + +P V+KACA ALL+
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA---ALLDFAYGR 204
Query: 125 XXXXXXXXXXX--DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+L VCN+++ MY + G V+ A R+FD M ERD SWN++++CY
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTV 209
A ++L+ M + G E +VT NT+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTI 291
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 2/226 (0%)
Query: 7 LQACSASKSLNQAKQLHHYML--LHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
L+ACS +L K H ++ SH LI +Y+ C DLR A +F+Q+
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ + SI++ + + + + EM G P+ +L A++ L
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
L + NS++DMY+K G++ A RVFD MR+RD ++ S++ Y G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
+ A+ + M G +PD VT V+ A LV E +F +++
Sbjct: 507 EVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 38/210 (18%)
Query: 108 LKACAQLAALLEXXXXXXXXXXXXXXXXDL-RVCNSVLDMYSKCGDVEGAARVFDEMRER 166
LKAC+ + AL D+ V NS++ MYS+C D+ A VF ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 167 DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT--------------------- 205
+ +WNS++S + N S+ +L+ M + G P+ +T
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 206 ---------------RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRH 250
N+++D Y + G + A +VF+ ++ + +++T+LI GY +G+
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
V+L F++M G + PD + VL +C
Sbjct: 507 EVALAWFKDMDRSG-IKPDHVTMVAVLSAC 535
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 131/307 (42%), Gaps = 11/307 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S + AC ++Q+H + + G+ P T L+ + C+ + A +F Q P
Sbjct: 420 LTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Query: 63 Q--PNVFAFTSILAFHSRHGLARQCIETYAE-MRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ A TSI+ ++R+GL + + + + + + D +L C L E
Sbjct: 480 SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLG-FRE 538
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
D+ + NS++ MY+KC D + A ++F+ MRE DV SWNS++SCY+
Sbjct: 539 MGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYI 598
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA--YCRMGLVSEASKVFEQIKDPNVISW 237
A+ + M +PD++T V+ A Y +S +F +K I
Sbjct: 599 LQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEP 658
Query: 238 TTLISGYSSVGRHGVSLGIFRE---MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
TT Y++ R G+ E +N V P+ L +L SCR + K +
Sbjct: 659 TT--EHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAK 716
Query: 295 YGLKIMP 301
L P
Sbjct: 717 LILSTKP 723
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 147/369 (39%), Gaps = 80/369 (21%)
Query: 24 HYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLAR 83
H L K LI Y R A +F L P V ++T++++ SR L
Sbjct: 103 HASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEI 162
Query: 84 QCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNS 142
+ ++ + MR G V P+ Y F +L AC +++ + V NS
Sbjct: 163 EALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRF-SLGIQIHGLIVKSGFLNSVFVSNS 221
Query: 143 VLDMYSK-----CGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM-RV 196
++ +Y K C DV ++FDE+ +RDV SWN+++S V G S +A ++ M RV
Sbjct: 222 LMSLYDKDSGSSCDDV---LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRV 278
Query: 197 DGCEPDVVTRNTVMDA----------------YCRMGLVSEAS----------------- 223
+G D T +T++ + R+GL+ E S
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKK 338
Query: 224 --KVFEQIKDPNVISWTTLISGYSSVGR------------------------------HG 251
++E + + +++T +I+ Y S G HG
Sbjct: 339 VESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHG 398
Query: 252 V-SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAG 310
+ +L +F +M+ G+ D +L+ + +C + ++IHG+ +K G F
Sbjct: 399 LKALKLFTDMLQRGVELTDF-SLTSAVDACGLVSEKKVSEQIHGFCIKF--GTAFNPCIQ 455
Query: 311 AALLTLYAR 319
ALL + R
Sbjct: 456 TALLDMCTR 464
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 159/393 (40%), Gaps = 88/393 (22%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIY-----ADCDDLRSAHSLFR 59
++L AC + Q+H ++ G F + L+ +Y + CDD+ LF
Sbjct: 186 AILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK---LFD 242
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALL 118
++PQ +V ++ ++++ + G + + + + EM R +G D + +L +C + LL
Sbjct: 243 EIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLL 302
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD-------------------------- 152
+L V N+++ YSK D
Sbjct: 303 RGRELHGRAIRIGLMQ-ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAY 361
Query: 153 -----VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRN 207
V+ A +F + E++ ++N++M+ + NG +A+++ M G E +
Sbjct: 362 MSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLT 421
Query: 208 TVMDAYCRMGLVSEASKVFEQIK----------DPNVIS--------------------- 236
+ +DA C GLVSE KV EQI +P + +
Sbjct: 422 SAVDA-C--GLVSE-KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 237 W----------TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
W T++I GY+ G ++ +F + + +F D +L+ +L C LG
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 287 ASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
G +IH Y LK G S G +L+++YA+
Sbjct: 538 EMGYQIHCYALK--AGYFSDISLGNSLISMYAK 568
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 16/277 (5%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYAD-CDDLRSAHSLFRQLPQ-PNVFAFTSILAFHSR 78
QLH + G + T LI++Y++ +D + LF ++ ++ A+ I+ +
Sbjct: 288 QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAV 347
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
+ R I + ++R + +SPD Y F VLKACA L D
Sbjct: 348 YDPER-AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA-RHALSIHAQVIKGGFLADTV 405
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
+ NS++ Y+KCG ++ RVFD+M RDV SWNSM+ Y +G + V + M ++
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDIN- 464
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVS 253
PD T ++ A G V E ++F + + P + + +I S R +
Sbjct: 465 --PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEA 522
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+ ++M D PDA +L SCR G GK
Sbjct: 523 EEVIKQMPMD----PDAVVWIALLGSCRKHGNTRLGK 555
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGS--HRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+L QAC+ ++L LHH+ML H + LI +YA C ++ A +F +P
Sbjct: 64 ALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMP 123
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ NV ++T+++ + + G ++ ++ M P+ + VL +C E
Sbjct: 124 ERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCR-----YEPGK 177
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA-----RVFDEMRERDVFSWNSMMSC 177
+ V N+V+ MY +C D GAA VF+ ++ +++ +WNSM++
Sbjct: 178 QVHGLALKLGLHCSIYVANAVISMYGRCHD--GAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVT 205
+ C L ++A+ V M DG D T
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRAT 263
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 37/171 (21%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
+ N +++MY+KCG++ A +VFD M ER+V SW ++++ YV G Q + SM +
Sbjct: 98 LANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSH 156
Query: 199 CEPDVVTRNTVMDAYCR-------------MGL----------------------VSEAS 223
C P+ T ++V+ + CR +GL EA
Sbjct: 157 CFPNEFTLSSVLTS-CRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAW 215
Query: 224 KVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
VFE IK N+++W ++I+ + ++G+F M +DG+ F A L+
Sbjct: 216 TVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLN 266
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
+V+ N +++ Y + G + A +VF+ + + NV+SWT LI+GY G +F M+
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ FP+ LS VL SCR GK++HG LK+ Y A++++Y R
Sbjct: 155 SH--CFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIY--VANAVISMYGR 204
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 114/273 (41%), Gaps = 23/273 (8%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+S+L+AC+ + A +H ++ G LI YA C L +F +
Sbjct: 372 FSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMD 431
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+V ++ S+L +S HG + + +M ++PD F +L AC+ + E
Sbjct: 432 SRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLR 488
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMMSCYVCN 181
L V+DM S+ A V +M + D W +++ +
Sbjct: 489 IFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKH 548
Query: 182 G---LSQRAVEVLESMRVDGCEP-DVVTRNTVMDAYCRMGLVSEASKVFEQI------KD 231
G L + A + L+ + EP + ++ + + Y G +EA+ +++ K+
Sbjct: 549 GNTRLGKLAADKLKEL----VEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKE 604
Query: 232 PNVISWTTL---ISGYSSVGRHGVSL-GIFREM 260
P+ +SWT + + ++S GRH ++RE+
Sbjct: 605 PD-LSWTEIGNKVHEFASGGRHRPDKEAVYREL 636
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 139/318 (43%), Gaps = 39/318 (12%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
++LH ++ R P+F T+L + YA DDL SA LF P+ +VF + SI+ ++
Sbjct: 23 NTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDL 137
+ + ++++ PD + + + + ++ +
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE--SFDTKGLRCIHGIAIVSGLGFD 140
Query: 138 RVCNS-VLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
++C S ++ YSK G + A+++F + + D+ WN M+ Y C G + + + M+
Sbjct: 141 QICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH 200
Query: 197 DGCEPDVVTRNTV-----------------------------------MDAYCRMGLVSE 221
G +P+ T + ++ Y R ++
Sbjct: 201 RGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIAS 260
Query: 222 ASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
A VF I +P++++ ++LI+GYS G H +L +F E+ G PD ++ VL SC
Sbjct: 261 ACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKK-PDCVLVAIVLGSCA 319
Query: 282 CLGALASGKEIHGYGLKI 299
L SGKE+H Y +++
Sbjct: 320 ELSDSVSGKEVHSYVIRL 337
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 112/212 (52%), Gaps = 1/212 (0%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSR 78
A +H + L + L+ +Y+ C + SA S+F + +P++ A +S++ +SR
Sbjct: 226 AWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSR 285
Query: 79 HGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLR 138
G ++ + +AE+R G PD + VL +CA+L+ + D++
Sbjct: 286 CGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLEL-DIK 344
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
VC++++DMYSKCG ++ A +F + E+++ S+NS++ +G + A E + G
Sbjct: 345 VCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMG 404
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
PD +T + ++ C GL+++ ++FE++K
Sbjct: 405 LIPDEITFSALLCTCCHSGLLNKGQEIFERMK 436
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 117/289 (40%), Gaps = 37/289 (12%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
+ +++ Y+ + A LF +P P++ + ++ + G + I + M+ +G
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
P+ Y + + LL C ++++MYS+C + A
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGC-ALVNMYSRCMCIASACS 263
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM-------- 210
VF+ + E D+ + +S+++ Y G + A+ + +R+ G +PD V V+
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 211 ---------------------------DAYCRMGLVSEASKVFEQIKDPNVISWTTLISG 243
D Y + GL+ A +F I + N++S+ +LI G
Sbjct: 324 SVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILG 383
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
G + F E++ G++ PD S +L +C G L G+EI
Sbjct: 384 LGLHGFASTAFEKFTEILEMGLI-PDEITFSALLCTCCHSGLLNKGQEI 431
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 91/227 (40%), Gaps = 1/227 (0%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L +C+ K++H Y++ G + LI +Y+ C L+ A SLF +P+ N
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKN 373
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ +F S++ HG A E + E+ G+ PD F +L C L +
Sbjct: 374 IVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFE 433
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR-VFDEMRERDVFSWNSMMSCYVCNGLS 184
++ + G +E A V + D +++SC + +
Sbjct: 434 RMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENT 493
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
A V E++ +G E V + + + Y R G E ++ + I +
Sbjct: 494 HLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISE 540
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 38/209 (18%)
Query: 146 MYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY--------------------------- 178
Y+ D+ A ++FD ER VF WNS++ Y
Sbjct: 49 FYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFT 108
Query: 179 ---VCNGLSQ----RAVEVLESMR-VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
+ G S+ + + + + V G D + + ++ AY + GL+ EASK+F I
Sbjct: 109 YACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIP 168
Query: 231 DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
DP++ W +I GY G + +F M + G P+ + + L
Sbjct: 169 DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ-PNCYTMVALTSGLIDPSLLLVAW 227
Query: 291 EIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+H + LKI Y G AL+ +Y+R
Sbjct: 228 SVHAFCLKINLDSHSY--VGCALVNMYSR 254
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 6/281 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ L+ C +L Q+H +++ G + L+ ++A+ +++ AH LF +LP
Sbjct: 345 LSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP 404
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ AF+ ++ + G + E+ G+ D ++ +LK C+ LA+L
Sbjct: 405 NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASL-GWGK 463
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ +++DMY KCG+++ +FD M ERDV SW ++ + NG
Sbjct: 464 QIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNG 523
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
+ A M G EP+ VT ++ A GL+ EA E +K + L
Sbjct: 524 RVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLE-PYLEH 582
Query: 243 GYSSVGRHGVSLGIFR---EMVNDGMVFPDAGALSGVLVSC 280
Y V G + G+F+ E++N + PD + +L +C
Sbjct: 583 YYCVVDLLGQA-GLFQEANELINKMPLEPDKTIWTSLLTAC 622
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 133/296 (44%), Gaps = 41/296 (13%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
LI Y + A +LF ++PQPNV ++ +++ G R +E M+ +G+ D
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLD 237
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
G+ P LKAC+ LL ++++DMYS CG + AA VF
Sbjct: 238 GFALPCGLKACS-FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVF 296
Query: 161 DEMR---ERDVFSWNSMMSCYVCNGLSQRAVEVLESMR---------------------- 195
+ + V WNSM+S ++ N ++ A+ +L +
Sbjct: 297 HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYV 356
Query: 196 -------------VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
V G E D + + ++D + +G + +A K+F ++ + ++I+++ LI
Sbjct: 357 NLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIR 416
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
G G + ++ +FRE++ G+ D +S +L C L +L GK+IHG +K
Sbjct: 417 GCVKSGFNSLAFYLFRELIKLGLD-ADQFIVSNILKVCSSLASLGWGKQIHGLCIK 471
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 39/288 (13%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+ C ++ + + + +++ G + F +I +Y D L AH +F ++ + N+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 67 FAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+T++++ ++ G + IE Y M + + + +++ VLKAC L ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACG-LVGDIQLGILVY 130
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D+ + NSV+DMY K G + A F E+ SWN+++S Y GL
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYS 245
AV + M PNV+SW LISG+
Sbjct: 191 EAVTLFHRM-----------------------------------PQPNVVSWNCLISGFV 215
Query: 246 SVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
G +L M +G+V D AL L +C G L GK++H
Sbjct: 216 DKGSPR-ALEFLVRMQREGLVL-DGFALPCGLKACSFGGLLTMGKQLH 261
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 129/322 (40%), Gaps = 40/322 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP---Q 63
L+ACS L KQLH ++ G PF + LI +Y++C L A +F Q
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+V + S+L+ + + ++ + D Y LK C L
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN-LRLGLQ 363
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D V + ++D+++ G+++ A ++F + +D+ +++ ++ V +G
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 184 SQRAVEVLES----------------MRV-------------------DGCEPDVVTRNT 208
+ A + ++V G E + VT
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATA 483
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D Y + G + +F+ + + +V+SWT +I G+ GR + F +M+N G + P
Sbjct: 484 LVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIG-IEP 542
Query: 269 DAGALSGVLVSCRCLGALASGK 290
+ G+L +CR G L +
Sbjct: 543 NKVTFLGLLSACRHSGLLEEAR 564
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 6/231 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++++L+ CS+ SL KQ+H + G +P T L+ +Y C ++ + LF +
Sbjct: 446 VSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGML 505
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V ++T I+ ++G + + +M G+ P+ F +L AC L E
Sbjct: 506 ERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARS 565
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCN 181
L V+D+ + G + A + ++M E D W S+++ C
Sbjct: 566 TLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTA--C- 622
Query: 182 GLSQRA--VEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
G + A V V+ + G D ++ +AY +G+ + SKV E K
Sbjct: 623 GTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAK 673
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 11/252 (4%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG-LARQCIETYAEMRFKGV 97
T +I Y + + A +F ++ + +++ SR G A++ ++ Y M+ G
Sbjct: 210 TSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGF 269
Query: 98 SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
P+ F V+ AC+ L + E +++ +S+LDMY+KCG + A
Sbjct: 270 HPNISTFASVIGACSVLTSH-EVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDAR 328
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
RVFD+M+E++VFSW SM+ Y NG + A+E+ M+ EP+ VT + A G
Sbjct: 329 RVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSG 388
Query: 218 LVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
LV + ++FE ++ P + + ++ G + R M PD+
Sbjct: 389 LVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER----PDSDI 444
Query: 273 LSGVLVSCRCLG 284
+ +L SC G
Sbjct: 445 WAALLSSCNLHG 456
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 134/317 (42%), Gaps = 41/317 (12%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
LQ S + K++H ++ G + KL+ ++ C L A +F +LP+P +
Sbjct: 41 LQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTL 100
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
A+ +++ + +HGL ++ + M + G DGY VLKA + +
Sbjct: 101 SAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCR 160
Query: 127 XXXXXXXXXDLR----VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ + +++D Y K G +E A VF+ M++ +V SM+S Y+ G
Sbjct: 161 LVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQG 220
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
+ A E+ + +V D+V N +++ + R G ++ S +
Sbjct: 221 FVEDAEEIFNTTKVK----DIVVYNAMVEGFSRSGETAKRS-----------------VD 259
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPG 302
Y S+ R G P+ + V+ +C L + G+++H +K G
Sbjct: 260 MYISMQRAG--------------FHPNISTFASVIGACSVLTSHEVGQQVHAQIMK--SG 303
Query: 303 EIFYRSAGAALLTLYAR 319
+ G++LL +YA+
Sbjct: 304 VYTHIKMGSSLLDMYAK 320
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 7/180 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S++ ACS S +Q+H ++ G + + L+ +YA C + A +F Q+ +
Sbjct: 278 SVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK 337
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NVF++TS++ + ++G + +E + M+ + P+ F L AC+ + +
Sbjct: 338 NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIF 397
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA---ARVFDEMRERDVFSWNSMMSCYVCN 181
+ ++D+ + GD+ A AR E + D+ W +++S CN
Sbjct: 398 ESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDI--WAALLSS--CN 453
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 4/284 (1%)
Query: 20 KQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRH 79
K++H + HG H T + +Y C ++ + LF +V ++S+++ ++
Sbjct: 272 KEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAET 331
Query: 80 GLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRV 139
G + + +MR +G+ + ++ AC + LL + +
Sbjct: 332 GDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTN-STLLSFASTVHSQILKCGFMSHILL 390
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
N+++DMY+KCG + A VF E+ E+D+ SW+SM++ Y +G A+E+ + M G
Sbjct: 391 GNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGH 450
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSS-VGRHGVSLGIFR 258
E D + ++ A GLV EA +F Q ++ + Y + +GR G F
Sbjct: 451 EVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFE 510
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGAL-ASGKEIHGYGLKIMP 301
+N M P A S +L +C G L +GK I +K P
Sbjct: 511 VTINMPMK-PSARIWSSLLSACETHGRLDVAGKIIANELMKSEP 553
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 148/360 (41%), Gaps = 51/360 (14%)
Query: 3 LNSLLQACS-ASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL 61
L S+++AC+ + QLH L G+ + LI +YA + +F ++
Sbjct: 49 LPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEM 108
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ ++ SI+ + GL + ++ EM F G P + +L C ++ +
Sbjct: 109 LHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGS----- 163
Query: 122 XXXXXXXXXXXXXXDLRVCNSVL------DMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
D R+ SVL DMY K D A VFD+M ++ SW +M+
Sbjct: 164 SSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMI 223
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA----------------------- 212
S V N + V++ +M+ + P+ VT +V+ A
Sbjct: 224 SGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGC 283
Query: 213 -------------YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
YCR G VS + +FE K +V+ W+++ISGY+ G + + +
Sbjct: 284 HADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQ 343
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
M +G + ++ L ++ +C L+ +H LK G + + G AL+ +YA+
Sbjct: 344 MRKEG-IEANSVTLLAIVSACTNSTLLSFASTVHSQILKC--GFMSHILLGNALIDMYAK 400
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 110/269 (40%), Gaps = 43/269 (15%)
Query: 91 EMRFKGVSPDGY--VFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYS 148
+++ + +G+ + P V+KACA D V NS++ MY+
Sbjct: 34 KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYA 93
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEP------- 201
K +VFDEM RD S+ S+++ +GL A+++++ M G P
Sbjct: 94 KFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVAS 153
Query: 202 ------------------------------DVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
V+ ++D Y + + A VF+Q++
Sbjct: 154 LLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEV 213
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALAS-GK 290
N +SWT +ISG + + + + +FR M + + P+ L VL +C L +S K
Sbjct: 214 KNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLR-PNRVTLLSVLPACVELNYGSSLVK 272
Query: 291 EIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
EIHG+ + G AA +T+Y R
Sbjct: 273 EIHGFSFR--HGCHADERLTAAFMTMYCR 299
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 10/296 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S L A S L+ A+ H + G T LI +Y + SA +F
Sbjct: 230 LLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAI 289
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V + ++ +++ GL +C+ +M+++ + P+ F +L +CA A
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAF-VGR 348
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D + +++DMY+K G +E A +F+ M+++DV SW +M+S Y +G
Sbjct: 349 TVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHG 408
Query: 183 LSQRAVEVLESMRVDGCE--PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
L++ AV + M + C+ P+ +T V++A GLV E + F+++ + S+T
Sbjct: 409 LAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEA--YSFTPK 466
Query: 241 ISGYSSV----GRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ Y V GR G L E++ + + D+ A +L +CR G G+ +
Sbjct: 467 VEHYGCVVDLLGRAG-QLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESV 521
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 145/341 (42%), Gaps = 47/341 (13%)
Query: 18 QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
+ ++H YM+ G + F +KL+ ++ D+R A S+F + N+F F +++ +S
Sbjct: 43 EVSRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYS 101
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACA-QLAALLEXXXXXXXXXXXXXXXXD 136
+ + ++R KG++ D + F LK+C+ +L + D
Sbjct: 102 ISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTD 161
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
LR N+++ Y CG + A +VFDEM + D +++++M+ Y+ A+++ MR
Sbjct: 162 LR--NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMR 219
Query: 196 VD-----------------------------------GCEPDVVTRNTVMDAYCRMGLVS 220
G + D+ ++ Y + G +S
Sbjct: 220 KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGIS 279
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
A ++F+ +V++W +I Y+ G + + R+M + M P++ G+L SC
Sbjct: 280 SARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK-PNSSTFVGLLSSC 338
Query: 281 RCLGALASGKEIHGYGLKIMPGEIFYRSA--GAALLTLYAR 319
A G+ + ++ E A G AL+ +YA+
Sbjct: 339 AYSEAAFVGRTVA----DLLEEERIALDAILGTALVDMYAK 375
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 141/360 (39%), Gaps = 70/360 (19%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L++C L +QLH ++ +G T ++ +Y C + A +F ++ P+
Sbjct: 168 VLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPS 227
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++ I+ + G + + + +M V P + V+ AC++ AL E
Sbjct: 228 DVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL-EVGKVIH 286
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR--------------------- 164
D V SV DMY KC +E A RVFD+ R
Sbjct: 287 AIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTR 346
Query: 165 ----------ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD----------------- 197
ER++ SWN+M+ YV A++ L MR +
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 198 ------------------GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-PNVISWT 238
G + +V+ N ++D Y + G + A+ F Q+ + + +SW
Sbjct: 407 GISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWN 466
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
L++G + VGR +L F M + P L+ +L C + AL GK IHG+ ++
Sbjct: 467 ALLTGVARVGRSEQALSFFEGMQVEAK--PSKYTLATLLAGCANIPALNLGKAIHGFLIR 524
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 8/249 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ-P 64
+L CS + KQ H ++ HG L+ +Y C L+SA+ FRQ+ +
Sbjct: 401 ILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELR 460
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ ++ ++L +R G + Q + + M+ + P Y +L CA + AL
Sbjct: 461 DEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPAL-NLGKAI 518
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ + +++DMYSKC + A VF E RD+ WNS++ NG S
Sbjct: 519 HGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRS 578
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTT 239
+ E+ + +G +PD VT ++ A R G V + F + P V +
Sbjct: 579 KEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDC 638
Query: 240 LISGYSSVG 248
+I Y G
Sbjct: 639 MIELYCKYG 647
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L ++CS+ + QA+++ +++ F + I+ Y C + A LF ++P+ +
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
++ +++ +++G++ + + M GV F VLK+C L L
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCG-LILDLRLLRQLH 185
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ + S++D+Y KC + A RVFDE+ SWN ++ Y+ G +
Sbjct: 186 CAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFND 245
Query: 186 RAVEVLESMRVDGCEP-----------------------------------DVVTRNTVM 210
AV + M P D V +V
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVF 305
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG 248
D Y + + A +VF+Q + ++ SWT+ +SGY+ G
Sbjct: 306 DMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSG 343
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 36/194 (18%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
N ++ Y KCG V+ A +F+EM ERD SWN++++ NG+S + M DG
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 201 P-----------------------------------DVVTRNTVMDAYCRMGLVSEASKV 225
+V +++D Y + ++S+A +V
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 226 FEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGA 285
F++I +P+ +SW ++ Y +G + ++ +F +M+ V P +S V+++C A
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELN-VRPLNHTVSSVMLACSRSLA 278
Query: 286 LASGKEIHGYGLKI 299
L GK IH +K+
Sbjct: 279 LEVGKVIHAIAVKL 292
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +LL C+ +LN K +H +++ G ++ +Y+ C A +F++
Sbjct: 499 LATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAA 558
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC 111
++ + SI+ R+G +++ E + + +GV PD F +L+AC
Sbjct: 559 TRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC 607
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 145/320 (45%), Gaps = 13/320 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +L+ + + ++ A++ M S R F +T ++ Y+ C L A +F Q
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKM----SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ +T++++ + ++ + + EM G+ PD V+ ACA L +L+
Sbjct: 306 KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLG-ILDKAK 364
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+L + N++++MY+KCG ++ VF++M R+V SW+SM++ +G
Sbjct: 365 WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHG 424
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
+ A+ + M+ + EP+ VT V+ GLV E K+F + D I T +
Sbjct: 425 EASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNI--TPKLE 482
Query: 243 GYSSVGRHGVSLGIFREM--VNDGMVFPDAGALSGVLVS-CRCLGALASGKEIHGYGLKI 299
Y + + RE V + M + G L+S CR G L GK L++
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL 542
Query: 300 MPGEIFYRSAGAALLTLYAR 319
P + A + +YAR
Sbjct: 543 EPD---HDGALVLMSNIYAR 559
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 150/384 (39%), Gaps = 73/384 (19%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N++L+ S KSLN KQLH ++L + K + + + +L A ++F +P
Sbjct: 13 NTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPS 72
Query: 64 P-NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
P F L SR R I Y +R G D + F +LKA ++++AL E
Sbjct: 73 PPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V +DMY+ CG + A VFDEM RDV +WN+M+ Y G
Sbjct: 133 LHGVAFKIATLC-DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 183 LSQRAVEVLESMRVDGCEPD--------------------------VVTRNTVMDAYCRM 216
L A ++ E M+ PD ++ + MD +
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 217 GLVS---------EASKVFEQIKDPNVISWTTLISGYSSVGR------------------ 249
LV+ A + F ++ N+ T ++SGYS GR
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 250 -------------HGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG-Y 295
+L +F EM G + PD ++ V+ +C LG L K +H
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSG-IKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 296 GLKIMPGEIFYRSAGAALLTLYAR 319
+ + E+ S AL+ +YA+
Sbjct: 371 HVNGLESEL---SINNALINMYAK 391
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 14/292 (4%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+++ S L AK++ M R T +I Y++C ++ A LF+ + +
Sbjct: 164 MMEIYGKSGELVNAKKMFDEM----PDRDHVAATVMINCYSECGFIKEALELFQDVKIKD 219
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+T+++ R+ + +E + EM+ + VS + + VL AC+ L AL E
Sbjct: 220 TVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGAL-ELGRWVH 278
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
V N++++MYS+CGD+ A RVF MR++DV S+N+M+S +G S
Sbjct: 279 SFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASV 338
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
A+ M G P+ VT +++A GL+ +VF +K +P + + +
Sbjct: 339 EAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCI 398
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ VGR L + + + PD L +L +C+ G + G++I
Sbjct: 399 VDLLGRVGR----LEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKI 446
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 46/317 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L++C K++ +H ++ + F +LI++ + D + A+ +F +
Sbjct: 32 LISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS 88
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
PNV+ +T+++ G + + Y M V PD YV VLKAC L E
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC-DLKVCREIHA 147
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
L++ +++Y K G++ A ++FDEM +RD + M++CY
Sbjct: 148 QVLKLGFGSSRSVGLKM----MEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCY---- 199
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
+ C G + EA ++F+ +K + + WT +I
Sbjct: 200 -----------------------------SEC--GFIKEALELFQDVKIKDTVCWTAMID 228
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPG 302
G +L +FREM + + + A+ VL +C LGAL G+ +H + ++
Sbjct: 229 GLVRNKEMNKALELFREMQMENVSANEFTAVC-VLSACSDLGALELGRWVHSF-VENQRM 286
Query: 303 EIFYRSAGAALLTLYAR 319
E+ G AL+ +Y+R
Sbjct: 287 EL-SNFVGNALINMYSR 302
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/230 (18%), Positives = 97/230 (42%), Gaps = 2/230 (0%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L ACS +L + +H ++ F LI +Y+ C D+ A +FR + +
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD 320
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V ++ ++++ + HG + + I + +M +G P+ +L AC+ L
Sbjct: 321 VISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN 380
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNGLS 184
+ ++D+ + G +E A R + + E D +++S +G
Sbjct: 381 SMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNM 440
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
+ ++ + + + PD T + + Y G E++++ E ++D +
Sbjct: 441 ELGEKIAKRL-FESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGI 489
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 139/308 (45%), Gaps = 18/308 (5%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
L+ C S L Q+H + G T L+ +Y+ C++ A +F ++P+ +
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMR--FKG-VSPDGYVFPKVLKACAQLAALLEXXXX 123
++ + + + R+ R + + +M+ G V PDG L+ACA L AL +
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGAL-DFGKQ 238
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
L + N+++ MYS+CG ++ A +VF MRER+V SW +++S NG
Sbjct: 239 VHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGF 298
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD------PNVISW 237
+ A+E M G P+ T ++ A GLV+E F++++ PN+ +
Sbjct: 299 GKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHY 358
Query: 238 TTLIS--GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
++ G + + SL EM PD+ +L +CR G + G+ + +
Sbjct: 359 GCVVDLLGRARLLDKAYSLIKSMEMK------PDSTIWRTLLGACRVHGDVELGERVISH 412
Query: 296 GLKIMPGE 303
+++ E
Sbjct: 413 LIELKAEE 420
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 36/307 (11%)
Query: 21 QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG 80
Q H +++ G PF LI Y+ A LF +V +T+++ R+G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 81 LARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVC 140
A + + + EM+ GV+ + VLKA ++ + D+ +
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM------ 194
+S++DMY KC + A +VFDEM R+V +W ++++ YV + + + V E M
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 195 -----------------------RV------DGCEPDVVTRNTVMDAYCRMGLVSEASKV 225
RV + E + T++D Y + G + EA V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 226 FEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGA 285
FE++ + NV +WT +I+G+++ G + +F M++ V P+ VL +C G
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLS-SHVSPNEVTFMAVLSACAHGGL 422
Query: 286 LASGKEI 292
+ G+ +
Sbjct: 423 VEEGRRL 429
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 142/342 (41%), Gaps = 48/342 (14%)
Query: 20 KQLHHYML---LHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFH 76
KQ+H +L + + R F + L + R A L QL ++ + S++ H
Sbjct: 18 KQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIG-H 76
Query: 77 SRHGLA---RQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXX 133
G+ R Y MR GV P + FP +LKA +L
Sbjct: 77 FSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD--SNPFQFHAHIVKFGL 134
Query: 134 XXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLES 193
D V NS++ YS G + A+R+FD ++DV +W +M+ +V NG + A+
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 194 MRVDGCEP------------------------------------DVVTRNTVMDAYCRMG 217
M+ G DV ++++D Y +
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCS 254
Query: 218 LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
+A KVF+++ NV++WT LI+GY + +F EM+ V P+ LS VL
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD-VAPNEKTLSSVL 313
Query: 278 VSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+C +GAL G+ +H Y +K EI +AG L+ LY +
Sbjct: 314 SACAHVGALHRGRRVHCYMIK-NSIEI-NTTAGTTLIDLYVK 353
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 10/238 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S+L AC+ +L++ +++H YM+ + T LI +Y C L A +F +L
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ NV+ +T+++ + HG AR + + M VSP+ F VL ACA + E
Sbjct: 369 EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRR 428
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM-RERDVFSWNSMM-SCYVC 180
++D++ + G +E A + + M E W ++ SC
Sbjct: 429 LFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSC--- 485
Query: 181 NGLSQRAVEV--LESMRVDGCEPDVVTRNTVM-DAYCRMGLVSEASKVFEQIKDPNVI 235
L + E+ + RV +P R T++ + Y E ++V +Q+KD V+
Sbjct: 486 --LLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVV 541
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 39/248 (15%)
Query: 89 YAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYS 148
+ EM+ G P+ + FP V KACA+LA + D+ V + +DM+
Sbjct: 40 FREMKRGGFEPNNFTFPFVAKACARLADV-GCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT--- 205
KC V+ AA+VF+ M ERD +WN+M+S + +G + +A + MR++ PD VT
Sbjct: 99 KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT 158
Query: 206 --------------------------------RNTVMDAYCRMGLVSEASKVFEQIK--D 231
NT + Y + G + A VFE I D
Sbjct: 159 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 218
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
V+SW ++ YS G + G++ M+ + PD + SC+ L G+
Sbjct: 219 RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK-PDLSTFINLAASCQNPETLTQGRL 277
Query: 292 IHGYGLKI 299
IH + + +
Sbjct: 278 IHSHAIHL 285
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 124/282 (43%), Gaps = 9/282 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+L +C ++L Q + +H + + G+ + I +Y+ +D SA LF +
Sbjct: 261 NLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++T +++ ++ G + + + M G PD ++ C + +L
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
++ +CN+++DMYSKCG + A +FD E+ V +W +M++ Y NG+
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF 440
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTT 239
A+++ M +P+ +T V+ A G + + + F +K P + ++
Sbjct: 441 LEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSC 500
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
++ G+ +L + R M PDAG +L +C+
Sbjct: 501 MVDLLGRKGKLEEALELIRNMSAK----PDAGIWGALLNACK 538
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 132/332 (39%), Gaps = 43/332 (12%)
Query: 8 QACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVF 67
+AC+ + + +H +++ F T + ++ C+ + A +F ++P+ +
Sbjct: 60 KACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDAT 119
Query: 68 AFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
+ ++L+ + G + + EMR ++PD ++++ A L+
Sbjct: 120 TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS-ASFEKSLKLLEAMHAV 178
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR--ERDVFSWNSMMSCYVCNGLSQ 185
+ V N+ + Y KCGD++ A VF+ + +R V SWNSM Y G +
Sbjct: 179 GIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAF 238
Query: 186 RA-----VEVLESMRVD------------------------------GCEPDVVTRNTVM 210
A + + E + D G + D+ NT +
Sbjct: 239 DAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFI 298
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
Y + A +F+ + +SWT +ISGY+ G +L +F M+ G PD
Sbjct: 299 SMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK-PDL 357
Query: 271 GALSGVLVSCRCLGALASGKEIHG----YGLK 298
L ++ C G+L +GK I YG K
Sbjct: 358 VTLLSLISGCGKFGSLETGKWIDARADIYGCK 389
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 148/344 (43%), Gaps = 46/344 (13%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTK-LIQIYADCDDLRSAHSLFRQLPQP 64
+++ CS + + + KQLH ++ G + F L+ Y+ C DL + F +P+
Sbjct: 219 MIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEK 278
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V ++ SI++ + +G ++ +++M+F G P F L C++ + +
Sbjct: 279 DVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIH 338
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
L V ++++DMY KC +E +A ++ + ++ NS+M+ + G++
Sbjct: 339 CYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGIT 398
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVM---------------------------------- 210
+ +E+ M +G D VT +TV+
Sbjct: 399 KDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSC 458
Query: 211 ---DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
DAY + G + KVF+++ PN+ T++I+GY+ G + + REM ++
Sbjct: 459 SLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLI- 517
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHG-----YGLKIMPGEIFY 306
PD + VL C G + G+ I YG I PG Y
Sbjct: 518 PDEVTILSVLSGCSHSGLVEEGELIFDSLESKYG--ISPGRKLY 559
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 2/234 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPF-FTTKLIQIYADCDDLRSAHSLFRQLPQ 63
S L CS + + KQ+H Y+L G + LI +Y C+ + ++ L++ LP
Sbjct: 320 SFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPC 379
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACA-QLAALLEXXX 122
N+ S++ G+ + IE + M +G D VLKA + L L
Sbjct: 380 LNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCT 439
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V S++D Y+K G E + +VFDE+ ++F S+++ Y NG
Sbjct: 440 LVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNG 499
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS 236
+ V++L M PD VT +V+ GLV E +F+ ++ IS
Sbjct: 500 MGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGIS 553
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 39/306 (12%)
Query: 50 DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLK 109
+L SAH F ++ +V + +++ +SR+G + + IE YAEM G+ FP VL
Sbjct: 61 NLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLS 120
Query: 110 ACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF 169
C+ ++ V ++++ +Y+ V+ A ++FDEM +R++
Sbjct: 121 VCSD-ELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLA 179
Query: 170 SWNSMMSCYVCNGLSQRAVEVLESMRVD--------------GCEPD------------- 202
N ++ C+ G S+R EV M ++ GC D
Sbjct: 180 VCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLV 239
Query: 203 ---------VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVS 253
+ N ++D Y G +S + + F + + +VISW +++S + G S
Sbjct: 240 VKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDS 299
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAAL 313
L +F +M G P L C + SGK+IH Y LK M ++ +AL
Sbjct: 300 LDLFSKMQFWGKR-PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLK-MGFDVSSLHVQSAL 357
Query: 314 LTLYAR 319
+ +Y +
Sbjct: 358 IDMYGK 363
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L CS + Q+H ++ G F + L+ +YA + A LF ++
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N+ +L + G +++ E Y M +GV+ +G + +++ C+ + E
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
++ V N ++D YS CGD+ G+ R F+ + E+DV SWNS++S G
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSV 296
Query: 185 QRAVEVLESMRVDGCEPDV 203
++++ M+ G P +
Sbjct: 297 LDSLDLFSKMQFWGKRPSI 315
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 148/355 (41%), Gaps = 44/355 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+++AC++ L + LH + G + ++ +YA C + +FRQ+ +
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ +L S R+ + + M F P F VL C +L
Sbjct: 87 PVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMH 145
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDV-EGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
D V N+++ MY+K G + A FD + ++DV SWN++++ + N +
Sbjct: 146 SYIIKAGLEK-DTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNM 204
Query: 184 SQRAVEVLESMRVDGCEPD-----------------------------VVTR-------- 206
A M + EP+ VV R
Sbjct: 205 MADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVF 264
Query: 207 --NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
N+++ Y R+G + EA+ +F ++ +++SW +I+GY+S + +F +V+ G
Sbjct: 265 VCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKG 324
Query: 265 MVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
V PD+ + +L C L LASGKEIH Y L+ + S G AL++ YAR
Sbjct: 325 DVSPDSVTIISILPVCAQLTDLASGKEIHSYILR-HSYLLEDTSVGNALISFYAR 378
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 39/262 (14%)
Query: 5 SLLQACSASKSLNQAKQLHHYM----LLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
SLL+ C + + + K++H Y LLH +P L+ YA C ++ AH +F
Sbjct: 437 SLLKFCINVQGIGKVKEVHGYSVKAGLLH-DEEEPKLGNALLDAYAKCGNVEYAHKIFLG 495
Query: 61 LPQP-NVFAFTSILAFHSRHG--------------------------LARQC-----IET 88
L + + ++ S+L+ + G A C I
Sbjct: 496 LSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGV 555
Query: 89 YAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYS 148
+ E++ +G+ P+ +L CAQLA+L D+R+ ++LD+Y+
Sbjct: 556 FREIQARGMRPNTVTIMNLLPVCAQLASL--HLVRQCHGYIIRGGLGDIRLKGTLLDVYA 613
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
KCG ++ A VF RD+ + +M++ Y +G + A+ + M +PD V T
Sbjct: 614 KCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITT 673
Query: 209 VMDAYCRMGLVSEASKVFEQIK 230
++ A C GL+ + ++++ I+
Sbjct: 674 MLTACCHAGLIQDGLQIYDSIR 695
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 146/375 (38%), Gaps = 80/375 (21%)
Query: 19 AKQLHHYMLLHGSHRKPFFT-TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHS 77
+Q+H Y++ + F L+ Y + A SLF ++ ++ ++ ++A ++
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 78 RHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
+ + + + + KG VSPD +L CAQL L D
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV----------------C 180
V N+++ Y++ GD A F M +D+ SWN+++ +
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 181 NGLSQRAVEVLESMRV------------------------DGCEPDVVTRNTVMDAYCRM 216
++ +V +L ++ D EP + N ++DAY +
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKL--GNALLDAYAKC 483
Query: 217 GLVSEASKVFEQIKDP-NVISWTTLISGYSSVGRH------------------------- 250
G V A K+F + + ++S+ +L+SGY + G H
Sbjct: 484 GNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIY 543
Query: 251 ------GVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEI 304
++G+FRE+ GM P+ + +L C L +L ++ HGY ++ G+I
Sbjct: 544 AESCCPNEAIGVFREIQARGMR-PNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDI 602
Query: 305 FYRSAGAALLTLYAR 319
+ LL +YA+
Sbjct: 603 RLK---GTLLDVYAK 614
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+SLL AC + Q KQ+H + T L+ +YA + L A F +
Sbjct: 248 FSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMV 303
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
NV ++ +++ +++G R+ + + +M + + PD F VL +CA+ +A+ E
Sbjct: 304 VRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQ 363
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
L V NS++ YS+ G++ A F +RE D+ SW S++ +G
Sbjct: 364 VQAMVTKKGSADF-LSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHG 422
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
++ ++++ ESM + +PD +T V+ A GLV E + F+++ +
Sbjct: 423 FAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTE 470
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 137/324 (42%), Gaps = 50/324 (15%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L++ C+ S ++ QLH M+ G F +T L+ Y C + A +F + +
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEM-----RFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ + ++++ + +G+ + M RF+G D + F +L AC +E
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRG---DYFTFSSLLSACR-----IEQ 259
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
D+ V ++L+MY+K + A F+ M R+V SWN+M+ +
Sbjct: 260 GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQ 319
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVT----------------------------------- 205
NG + A+ + M ++ +PD +T
Sbjct: 320 NGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSV 379
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
N+++ +Y R G +SEA F I++P+++SWT++I +S G SL +F M+
Sbjct: 380 ANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-- 437
Query: 266 VFPDAGALSGVLVSCRCLGALASG 289
+ PD VL +C G + G
Sbjct: 438 LQPDKITFLEVLSACSHGGLVQEG 461
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 144/347 (41%), Gaps = 52/347 (14%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
L+ KQ H +M+ G + F KL+Q Y + A LF ++P N+ + ++
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILI-- 109
Query: 76 HSRHGLARQCIET----------YAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
HG+ ++ +T + + F VS D F +++ C + ++
Sbjct: 110 ---HGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTD-STNMKAGIQLH 165
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
S++ Y KCG + A RVF+ + +RD+ WN+++S YV NG+
Sbjct: 166 CLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMID 225
Query: 186 RAVEVLESMRVD----------------GC-----------------EPDVVTRNTVMDA 212
A +L+ M D C + D+ +++
Sbjct: 226 EAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
Y + +S+A + FE + NV+SW +I G++ G ++ +F +M+ + + PD
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ-PDELT 344
Query: 273 LSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ VL SC A+ K++ K G + S +L++ Y+R
Sbjct: 345 FASVLSSCAKFSAIWEIKQVQAMVTK--KGSADFLSVANSLISSYSR 389
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 11/307 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYAD--CDDLRSAHSLFRQLPQ 63
LL ACS + K LH ++ G + T LI +Y + A SLF L
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS 370
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
++ ++ SI+ ++ GL+ ++ ++ +R + D Y F +L++C+ LA L+
Sbjct: 371 KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLAT-LQLGQQ 429
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNG 182
+ V +S++ MYSKCG +E A + F ++ + +WN+M+ Y +G
Sbjct: 430 IHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
L Q ++++ M + D VT ++ A GL+ E ++ + +P V +
Sbjct: 490 LGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL-NLMEP-VYKIQPRME 547
Query: 243 GYSS----VGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
Y++ +GR G+ + +E++ + PD L L CR G + ++ + L+
Sbjct: 548 HYAAAVDLLGRAGL-VNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLE 606
Query: 299 IMPGEIF 305
I P + F
Sbjct: 607 IEPEDHF 613
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 144/338 (42%), Gaps = 49/338 (14%)
Query: 23 HHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLA 82
H Y + GS + + +++ Y L A+ LF ++P+ + ++ ++++ ++ G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 83 RQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNS 142
+ M+ G DGY F ++LK A + + ++ V +S
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRF-DLGEQVHGLVIKGGYECNVYVGSS 141
Query: 143 VLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV----------------------- 179
++DMY+KC VE A F E+ E + SWN++++ +V
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 180 -----------------CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA 222
CN L Q +VL+ G + ++ N ++ +Y G VS+A
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKL----GLQHEITICNAMISSYADCGSVSDA 257
Query: 223 SKVFEQI-KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+VF+ + ++ISW ++I+G+S + +F +M V D +G+L +C
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM-QRHWVETDIYTYTGLLSACS 316
Query: 282 CLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
GK +H G+ I G SA AL+++Y +
Sbjct: 317 GEEHQIFGKSLH--GMVIKKGLEQVTSATNALISMYIQ 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL- 61
++LL++CS +L +Q+H G F + LI +Y+ C + SA F+Q+
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ + A+ +++ +++HGL + ++ +++M + V D F +L AC+ + E
Sbjct: 471 SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGL 530
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
+ + +D+ + G V A + + M
Sbjct: 531 ELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 572
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 138/314 (43%), Gaps = 27/314 (8%)
Query: 18 QAKQLHHYML--LHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
+ LH ++L L + F L+ YA+C LR A SLF ++ +P++ + ++LA
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 76 HSRHGLARQCIETYAE-----MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
++ + I++ E MR + V P+ ++K+CA L +
Sbjct: 191 YAN----SEEIDSDEEVLLLFMRMQ-VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKN 245
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEV 190
V S++D+YSKCG + A +VFDEM +RDV +N+M+ +G Q +E+
Sbjct: 246 NLTLNQF-VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIEL 304
Query: 191 LESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYS 245
+S+ G PD T + A GLV E ++F +K +P V + L+
Sbjct: 305 YKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLG 364
Query: 246 SVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIF 305
GR L E + V P+A L S + G G+ LK + G F
Sbjct: 365 RSGR----LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGE----IALKHLLGLEF 416
Query: 306 YRSAGAALLT-LYA 318
S LL+ +YA
Sbjct: 417 ENSGNYVLLSNIYA 430
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 97/238 (40%), Gaps = 8/238 (3%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
+ L +L+++C+ + H Y+L + F T LI +Y+ C L A +F +
Sbjct: 217 LSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDE 276
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+ Q +V + +++ + HG ++ IE Y + +G+ PD F + AC+ + E
Sbjct: 277 MSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEG 336
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYV 179
+ ++D+ + G +E A +M + + W S +
Sbjct: 337 LQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQ 396
Query: 180 CNGLSQR---AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
+G +R A++ L + + V+ N Y + ++ K E +KD V
Sbjct: 397 THGDFERGEIALKHLLGLEFENSGNYVLLSNI----YAGVNRWTDVEKTRELMKDHRV 450
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
QP+ F S+LA SR GL + EM + + D + + +L A + ++
Sbjct: 336 QPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK-GGQMDLAF 394
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCY 178
++ ++V+D ++K G + A +F EMR D S+N+++S Y
Sbjct: 395 EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIY 454
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNV 234
G S+ A+++L M G + DVVT N ++ Y + G E KVF ++K PN+
Sbjct: 455 TKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL 514
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
++++TLI GYS G + ++ IFRE + G+
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 110/254 (43%), Gaps = 13/254 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
NSLL CS A+ L M + F L+ + A + Q+P
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 63 ----QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
PNV ++++++ ++ G + + + EMR+ G++ D + +L ++
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS- 460
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF----SWNSM 174
E D+ N++L Y K G + +VF EM+ V +++++
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK---- 230
+ Y GL + A+E+ + G DVV + ++DA C+ GLV A + +++
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 231 DPNVISWTTLISGY 244
PNV+++ ++I +
Sbjct: 581 SPNVVTYNSIIDAF 594
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 138 RVCNSVLDMYSKCGDVEGAARVFDEM----RERDVFSWNSMMSCYVCNGLSQRAVEVLES 193
++ ++++ + G V A R+F+ V+++++++S Y +GL + A+ V S
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 194 MRVDGCEPDVVTRNTVMDAYCRMGL-VSEASKVFEQIK----DPNVISWTTLISGYSSVG 248
M+ G P++VT N V+DA + G+ + +K F++++ P+ I++ +L++ S G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 249 RHGVSLGIFREMVN 262
+ +F EM N
Sbjct: 354 LWEAARNLFDEMTN 367
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 50/285 (17%)
Query: 1 MHLNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
++ SLL + + L++A+ L M R ++ Y C + A +LFR+
Sbjct: 78 VYWTSLLSKYAKTGYLDEARVLFEVM----PERNIVTCNAMLTGYVKCRRMNEAWTLFRE 133
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
+P+ NV ++T +L G + +E + EM + V
Sbjct: 134 MPK-NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVS--------------------- 171
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
N+++ + GD+E A +VFD M RDV SWN+M+ Y+
Sbjct: 172 -------------------WNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIE 212
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
N + A + M E +VVT +++ YCR G V EA ++F ++ + N++SWT +
Sbjct: 213 NDGMEEAKLLFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAM 268
Query: 241 ISGYSSVGRHGVSLGIFREMVND-GMVFPDAGALSGVLVSCRCLG 284
ISG++ + +L +F EM D V P+ L + +C LG
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG 313
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 16/296 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N++++ + + +AK L M S + T ++ Y D+R A+ LF ++P+
Sbjct: 204 NAMIKGYIENDGMEEAKLLFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE 259
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMR--FKGVSPDGYVFPKVLKACAQLAA----L 117
N+ ++T++++ + + L R+ + + EM+ VSP+G + AC L L
Sbjct: 260 RNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRL 319
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
E D R+ S++ MY+ G + A + +E D+ S N +++
Sbjct: 320 GEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDLQSCNIIINR 377
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISW 237
Y+ NG +RA + E RV D V+ +++D Y G VS A +F+++ D + ++W
Sbjct: 378 YLKNGDLERAETLFE--RVKSLH-DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTW 434
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
T +ISG + + +MV G+ P S +L S L GK IH
Sbjct: 435 TVMISGLVQNELFAEAASLLSDMVRCGLK-PLNSTYSVLLSSAGATSNLDQGKHIH 489
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 103/217 (47%), Gaps = 6/217 (2%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T +I Y + D+ A LF++L + +T +++ ++ L + ++M G+
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX-XXXDLRVCNSVLDMYSKCGDVEGAA 157
P + +L + + L + DL + NS++ MY+KCG +E A
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
+F +M ++D SWNSM+ +GL+ +A+ + + M G +P+ VT V+ A G
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Query: 218 LVSEASKVFEQIKD-----PNVISWTTLISGYSSVGR 249
L++ ++F+ +K+ P + + ++I G+
Sbjct: 584 LITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGK 620
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 38/188 (20%)
Query: 142 SVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM------- 194
S++D Y + GDV A +F ++ ++D +W M+S V N L A +L M
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 195 -----------------------------RVDGC-EPDVVTRNTVMDAYCRMGLVSEASK 224
+ C +PD++ +N+++ Y + G + +A +
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 225 VFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLG 284
+F ++ + +SW ++I G S G +L +F+EM++ G P++ GVL +C G
Sbjct: 525 IFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKK-PNSVTFLGVLSACSHSG 583
Query: 285 ALASGKEI 292
+ G E+
Sbjct: 584 LITRGLEL 591
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 138/307 (44%), Gaps = 16/307 (5%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S L+ S + LN A Q+H M+ G + + LI +Y C + A +F
Sbjct: 242 SSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQ 301
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N+F T+I+ + + + + +++M K V P+ Y F +L + A+L+ LL+
Sbjct: 302 NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELS-LLKQGDLL 360
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V N++++MY+K G +E A + F M RD+ +WN+M+S +GL
Sbjct: 361 HGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLG 420
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTT 239
+ A+E + M G P+ +T V+ A +G V + F Q+ P++ +T
Sbjct: 421 REALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTC 480
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFP---DAGALSGVLVSCRCLGALASGKEIHGYG 296
++ S G+F++ + P D A +L +C GK++ Y
Sbjct: 481 IVGLLSKA-------GMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYA 533
Query: 297 LKIMPGE 303
++ P +
Sbjct: 534 IEKYPND 540
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 127/319 (39%), Gaps = 37/319 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+ ++CS S + + KQ H L +G F L+ +Y+ C A + LP +
Sbjct: 142 VFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCD 201
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ F+S L+ + G ++ ++ + + + + L+ + L L
Sbjct: 202 LSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD-LNLALQVH 260
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
++ C ++++MY KCG V A RVFD+ +++F ++M Y + +
Sbjct: 261 SRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFE 320
Query: 186 RAVEVLESMRVDGCEPDVVT-----------------------------RNTVM------ 210
A+ + M P+ T RN VM
Sbjct: 321 EALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALV 380
Query: 211 DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
+ Y + G + +A K F + ++++W T+ISG S G +L F M+ G + P+
Sbjct: 381 NMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI-PNR 439
Query: 271 GALSGVLVSCRCLGALASG 289
GVL +C +G + G
Sbjct: 440 ITFIGVLQACSHIGFVEQG 458
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 148/356 (41%), Gaps = 43/356 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLH-HYMLLHGSHR--KPFFTTKLIQIYADCDDLRSAHSLFR 59
LN LL+ C+ S L + +H H ++ + S R + LI +Y C + A LF
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLAALL 118
+P+ NV ++ +++ + G + ++ + M F G S P+ +V V K+C+ +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
E + V N+++ MYS C A RV D++ D+ ++S +S Y
Sbjct: 154 EGKQFHGCFLKYGLISHEF-VRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 179 VCNGLSQRAVEVLE----------------SMRV-------------------DGCEPDV 203
+ G + ++VL S+R+ G +V
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
+++ Y + G V A +VF+ N+ TT++ Y +L +F +M +
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM-DT 331
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
V P+ + +L S L L G +HG LK G + G AL+ +YA+
Sbjct: 332 KEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLK--SGYRNHVMVGNALVNMYAK 385
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 143/337 (42%), Gaps = 41/337 (12%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLF---R 59
+SLL++C ++ K +H ++ LI +Y+ D A +F R
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ + +V ++++++A + +G I+ + E G+ P+ Y + V++AC+ +
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD-VEGAARVFDEMRERDVFSWNSMMSCY 178
D+ V S++DM+ K + E A +VFD+M E +V +W M++
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM--------------------------DA 212
+ G + A+ M + G E D T ++V D
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV 304
Query: 213 YCRM----------GLVSEASKVFEQIKDPNVISWTTLISGY-SSVGRHGVSLGIFREMV 261
C + G V + KVF++++D +V+SWT LI+GY + ++ +F EM+
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
G V P+ S +C L GK++ G K
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 1/233 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+S +AC KQ+ G +I ++ D + A F L
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 435
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ N+ ++ + L R+ Q + +E+ + + + F +L A + ++
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSI-RKGE 494
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ VCN+++ MYSKCG ++ A+RVF+ M R+V SW SM++ + +G
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
+ R +E M +G +P+ VT ++ A +GLVSE + F + + + I
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKI 607
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 147/330 (44%), Gaps = 50/330 (15%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC------DDLRSAHS 56
L+S+ AC+ ++L+ KQLH + + G L+ +YA C DD R
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCR---K 326
Query: 57 LFRQLPQPNVFAFTSILAFHSRH-GLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQL 114
+F ++ +V ++T+++ + ++ LA + I ++EM +G V P+ + F KAC L
Sbjct: 327 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSM 174
+ + V NSV+ M+ K +E A R F+ + E+++ S+N+
Sbjct: 387 SD-PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 175 M--SCY--------------------------------VCNGLSQRAVEVLESMRVD-GC 199
+ +C V N S R E + S V G
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
+ N ++ Y + G + AS+VF +++ NVISWT++I+G++ G L F +
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQ 565
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASG 289
M+ +G V P+ +L +C +G ++ G
Sbjct: 566 MIEEG-VKPNEVTYVAILSACSHVGLVSEG 594
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Query: 50 DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLK 109
+ A +F P+ N+ +T+++ + R+G Q + + EM GV D + + VL
Sbjct: 286 ETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLH 345
Query: 110 ACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF 169
AC+ LA LL V N+++++Y+KCGD++ A R F ++ +D+
Sbjct: 346 ACSGLA-LLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLV 404
Query: 170 SWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQ- 228
SWN+M+ + +GL+ +A+++ ++M G +PD VT ++ GLV E +FE
Sbjct: 405 SWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESM 464
Query: 229 IKD 231
+KD
Sbjct: 465 VKD 467
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 38/279 (13%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
L+ Y + + +A +F ++P+ FA+ +++ H+ G C+ + EM PD
Sbjct: 144 LLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPD 203
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
Y F ++ AC+ ++ + + NSVL Y+K G +
Sbjct: 204 CYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRD------ 257
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
D MRE + ++EVL V+ N+++DA ++G
Sbjct: 258 DAMRELE-------------------SIEVLTQ----------VSWNSIIDACMKIGETE 288
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+A +VF + N+++WTT+I+GY G +L F EM+ G V D A VL +C
Sbjct: 289 KALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSG-VDSDHFAYGAVLHAC 347
Query: 281 RCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
L L GK IH G I G Y G AL+ LYA+
Sbjct: 348 SGLALLGHGKMIH--GCLIHCGFQGYAYVGNALVNLYAK 384
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T I A + SA +F +P+ + A+ ++L +SR GL ++ I + ++RF
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD Y F +L CA L + + L V NS++DMY KC D A +
Sbjct: 68 PDDYSFTAILSTCASLGNV-KFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 159 VFDEM--RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRM 216
VF +M R+ +W S++ Y+ E E+
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYM-------NAEQFEA----------------------- 156
Query: 217 GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
A VF ++ +W +ISG++ G+ L +F+EM+ + PD S +
Sbjct: 157 -----ALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEML-ESEFKPDCYTFSSL 210
Query: 277 LVSCRCLGA-LASGKEIHGYGLK 298
+ +C + + G+ +H LK
Sbjct: 211 MNACSADSSNVVYGRMVHAVMLK 233
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 99/261 (37%), Gaps = 27/261 (10%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L ACS L K +H ++ G + L+ +YA C D++ A F +
Sbjct: 342 AVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK 401
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
++ ++ ++L HGLA Q ++ Y M G+ PD F +L C+ + E
Sbjct: 402 DLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIF 461
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
++ ++DM+ + G + A + + S V + +
Sbjct: 462 ESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL------------ATTYSSLVTDSSN 509
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY 244
+ E L + C T L E SKV + + +S+ L + Y
Sbjct: 510 NSSWETL----LGACSTHWHTE-----------LGREVSKVLKIAEPSEEMSFVLLSNLY 554
Query: 245 SSVGRHGVSLGIFREMVNDGM 265
S GR + REMV GM
Sbjct: 555 CSTGRWKEGEDVRREMVERGM 575
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 145/323 (44%), Gaps = 37/323 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++ +LQ C+ + ++ +AK H ++ LI Y+ C + A +F +
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++ ++ +++ ++R+ + + ++ + EMR +G + VL AC LE
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALE-CK 182
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+L V ++LD+Y+KCG ++ A +VF+ M+++ +W+SM++ YV N
Sbjct: 183 KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242
Query: 183 LSQRAV-----------------------------EVLESMRV------DGCEPDVVTRN 207
+ A+ ++E ++ G +V +
Sbjct: 243 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 208 TVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+ +D Y + G + E+ +F ++++ N+ W T+ISG++ R + +F +M DGM
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGM-H 361
Query: 268 PDAGALSGVLVSCRCLGALASGK 290
P+ S +L C G + G+
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGR 384
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 137/284 (48%), Gaps = 10/284 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++S+L AC + + K+LH + + T L+ +YA C ++ A +F +
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ ++S++A + ++ + + Y + + + + V+ AC+ LAAL+E
Sbjct: 225 DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ 284
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
++ V +S +DMY+KCG + + +F E++E+++ WN+++S + +
Sbjct: 285 MHAVICKSGFGS-NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 343
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISW 237
+ + + E M+ DG P+ VT ++++ GLV E + F+ ++ PNV+ +
Sbjct: 344 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 403
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ ++ +GR G+ L E++ P A +L SCR
Sbjct: 404 SCMV---DILGRAGL-LSEAYELIKSIPFDPTASIWGSLLASCR 443
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 135/309 (43%), Gaps = 54/309 (17%)
Query: 61 LPQPNVFAFT-------SILAFHSRHGLARQCIETYAEMRFKGVSPDGY--------VFP 105
LP+ N+ FT +L S + I A + VSP Y +
Sbjct: 6 LPRMNILGFTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVH 65
Query: 106 KVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE 165
++L+ CA+ A++E D+ + N +++ YSKCG VE A +VFD M E
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEG-DVTLLNVLINAYSKCGFVELARQVFDGMLE 124
Query: 166 RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV---------------- 209
R + SWN+M+ Y N + A+++ MR +G + T ++V
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 184
Query: 210 -------------------MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRH 250
+D Y + G++ +A +VFE ++D + ++W+++++GY +
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAG 310
+L ++R + + LS V+ +C L AL GK++H K G + ++
Sbjct: 245 EEALLLYRRAQRMSLE-QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 311 AALLTLYAR 319
A + +YA+
Sbjct: 304 A--VDMYAK 310
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 43/287 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++SL+ +LNQ KQ+H ++L G + + TKLI+ ++ R++
Sbjct: 49 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYA--RRVI 106
Query: 63 QP----NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
+P N F +T+++ ++ G + I Y MR + ++P + F +LKAC + L
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL- 165
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
+ V N+++DMY KC ++ A +VFDEM ERDV SW +++ Y
Sbjct: 166 NLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAY 225
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
R+G + A+++FE + ++++WT
Sbjct: 226 -----------------------------------ARVGNMECAAELFESLPTKDMVAWT 250
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGA 285
+++G++ + +L F M G + D ++G + +C LGA
Sbjct: 251 AMVTGFAQNAKPQEALEYFDRMEKSG-IRADEVTVAGYISACAQLGA 296
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 128/317 (40%), Gaps = 42/317 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLH-HYMLLHG------------------------------S 31
++LL+AC K LN +Q H L G
Sbjct: 152 FSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP 211
Query: 32 HRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
R T+LI YA ++ A LF LP ++ A+T+++ +++ ++ +E +
Sbjct: 212 ERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDR 271
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVL-DMYSKC 150
M G+ D + ACAQL A D V S L DMYSKC
Sbjct: 272 MEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKC 331
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG-CEPDVVTRNTV 209
G+VE A VF M ++VF+++SM+ +G +Q A+ + M +P+ VT
Sbjct: 332 GNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGA 391
Query: 210 MDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
+ A GLV + +VF+ + P +T ++ GR +L + + M
Sbjct: 392 LMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS--- 448
Query: 265 MVFPDAGALSGVLVSCR 281
V P G +L +CR
Sbjct: 449 -VEPHGGVWGALLGACR 464
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 16/287 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N++L + + AK+L M R +I YA C + A +LF ++P+
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPC----RNVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ ++ +++A +S+ G + + + + +M +G + F L CA + AL E
Sbjct: 372 RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL-ELGKQ 430
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
V N++L MY KCG +E A +F EM +D+ SWN+M++ Y +G
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGF 490
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWT 238
+ A+ ESM+ +G +PD T V+ A GLV + + F + PN +
Sbjct: 491 GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYA 550
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVF-PDAGALSGVLVSCRCLG 284
++ +GR G+ M N M F PDA +L + R G
Sbjct: 551 CMV---DLLGRAGLLEDAHNLMKN--MPFEPDAAIWGTLLGASRVHG 592
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 149/348 (42%), Gaps = 66/348 (18%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N LL K + +A+Q M + R +I YA + A LF + P
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNV----RDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPD----GYVFPKVLKACAQLAALL 118
+VF +T++++ + ++ + + E + +M + VS + GYV + ++ +L ++
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
++ N+++ Y++CG + A +FD+M +RD SW +M++ Y
Sbjct: 339 PCR--------------NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY 384
Query: 179 VCNGLSQRAVEVLESMRVDGCE-------------PDVV--------------------- 204
+G S A+ + M +G DVV
Sbjct: 385 SQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGC 444
Query: 205 -TRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
N ++ YC+ G + EA+ +F+++ +++SW T+I+GYS G V+L F M +
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE 504
Query: 264 GMVFPDAGALSGVLVSCRCLGALASGKE-----IHGYGLKIMPGEIFY 306
G+ PD + VL +C G + G++ YG +MP Y
Sbjct: 505 GLK-PDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYG--VMPNSQHY 549
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 159/351 (45%), Gaps = 59/351 (16%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N +++ +++L +A++L M R ++ YA + A S+F ++P+
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 64 PNVFAFTSIL-AFHSRHGLARQCIETYAEMRFKGVSPD----GYVFPKVLKACAQLAALL 118
N ++ ++L A+ + C+ + + VS + G+V K + Q +
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
D+ N+++ Y++ G ++ A ++FDE +DVF+W +M+S Y
Sbjct: 246 NVR--------------DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGY 291
Query: 179 VCNGLSQRAVEVLESM-------------------RVDGCEP--------DVVTRNTVMD 211
+ N + + A E+ + M R++ + +V T NT++
Sbjct: 292 IQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMIT 351
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
Y + G +SEA +F+++ + +SW +I+GYS G +L +F +M +G +
Sbjct: 352 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL-NRS 410
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSA---GAALLTLYAR 319
+ S L +C + AL GK++HG +++ G Y + G ALL +Y +
Sbjct: 411 SFSSALSTCADVVALELGKQLHG---RLVKGG--YETGCFVGNALLLMYCK 456
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
N ++ Y + G+ E A ++FDEM ERD+ SWN M+ YV N +A E+ E M E
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PE 154
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
DV + NT++ Y + G V +A VF+++ + N +SW L+S Y + + +F+
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR 214
Query: 261 VNDGMVFPDAGALSGVLVSCRC-LGALASGKEI 292
N LVS C LG K+I
Sbjct: 215 EN------------WALVSWNCLLGGFVKKKKI 235
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 26/230 (11%)
Query: 54 AHSLFRQLPQPNVFAFTSILAFHSRHG---LARQCIETYAEMRF--KGVSPDGYVFPKVL 108
A +F+++P+ + ++ +++ + R+G LAR+ + E V GYV + L
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNL 142
Query: 109 KACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV 168
+L ++ D+ N++L Y++ G V+ A VFD M E++
Sbjct: 143 GKARELFEIMPER--------------DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND 188
Query: 169 FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQ 228
SWN+++S YV N + A + +S +V+ N ++ + + + EA + F+
Sbjct: 189 VSWNALLSAYVQNSKMEEACMLFKSRE----NWALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 229 IKDPNVISWTTLISGYSSVGRHGVSLGIFREM-VNDGMVFPDAGALSGVL 277
+ +V+SW T+I+GY+ G+ + +F E V D VF +SG +
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD--VFTWTAMVSGYI 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
D++ N + Y + G A RVF M S+N M+S Y+ NG + A ++ + M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM- 121
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG 248
E D+V+ N ++ Y R + +A ++FE + + +V SW T++SGY+ G
Sbjct: 122 ---PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 124/247 (50%), Gaps = 12/247 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSP 99
+I Y D+++A LF +P+ NV ++T++++ S++G + ++ + M + K V P
Sbjct: 154 MITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKP 213
Query: 100 DGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV 159
+ VL ACA L L E ++ VCN+ ++MYSKCG ++ A R+
Sbjct: 214 NHITVVSVLPACANLGEL-EIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRL 272
Query: 160 FDEM-RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
F+E+ +R++ SWNSM+ +G A+ + M +G +PD VT ++ A G+
Sbjct: 273 FEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGM 332
Query: 219 VSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGAL 273
V + ++F+ +++ P + + +I VG+ + + + M + PDA
Sbjct: 333 VVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMP----MKPDAVVW 388
Query: 274 SGVLVSC 280
+L +C
Sbjct: 389 GTLLGAC 395
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 135/349 (38%), Gaps = 82/349 (23%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAF 75
+N KQLH + L G T L+Q +L A LF F + ++
Sbjct: 1 MNGIKQLHAHCLRTGVDE----TKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQA 56
Query: 76 HSRHGLARQCIETYAEMRFKGVSPDGYVF------------------------------- 104
+ H + I Y + F G+ P + F
Sbjct: 57 YYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESD 116
Query: 105 ----PKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
++ A A+L AL D+ V N+++ Y + GD++ A +F
Sbjct: 117 SFCCTTLITAYAKLGALC-----CARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELF 171
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD-GCEPDVVTR------------- 206
D M ++V SW +++S + NG A+++ M D +P+ +T
Sbjct: 172 DSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGEL 231
Query: 207 ----------------------NTVMDAYCRMGLVSEASKVFEQIKDP-NVISWTTLISG 243
N ++ Y + G++ A ++FE++ + N+ SW ++I
Sbjct: 232 EIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGS 291
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
++ G+H +L +F +M+ +G PDA G+L++C G + G+E+
Sbjct: 292 LATHGKHDEALTLFAQMLREGEK-PDAVTFVGLLLACVHGGMVVKGQEL 339
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 49/292 (16%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
LN ++ C S ++ A ++ H M + + + LI I D + AH LF ++P
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTIT---WNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+P+ F++ +L+ + R+ + + M FK
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK--------------------------- 153
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D N+++ Y++ G++E A +F M E++ SWN+M+S Y+ G
Sbjct: 154 -------------DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECG 200
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-DPNVISWTTLI 241
++A + V G VV ++ Y + V A +F+ + + N+++W +I
Sbjct: 201 DLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMI 256
Query: 242 SGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
SGY R L +FR M+ +G + P++ LS L+ C L AL G++IH
Sbjct: 257 SGYVENSRPEDGLKLFRAMLEEG-IRPNSSGLSSALLGCSELSALQLGRQIH 307
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 112/249 (44%), Gaps = 11/249 (4%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLP-QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGV 97
T +I Y + A ++F+ + N+ + ++++ + + ++ + M +G+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 98 SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
P+ L C++L+AL + D+ S++ MY KCG++ A
Sbjct: 281 RPNSSGLSSALLGCSELSAL-QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
++F+ M+++DV +WN+M+S Y +G + +A+ + M + PD +T V+ A G
Sbjct: 340 KLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Query: 218 LVSEASKVFEQI-----KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
LV+ FE + +P +T ++ G+ +L + R M P A
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP----FRPHAAV 455
Query: 273 LSGVLVSCR 281
+L +CR
Sbjct: 456 FGTLLGACR 464
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S L CS +L +Q+H + T LI +Y C +L A LF +
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKAC 111
+ +V A+ ++++ +++HG A + + + EM + PD F VL AC
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLAC 395
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 36 FFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK 95
T LI Y + + A SLF ++P +V A+T+++ ++ + E + EM +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 96 GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG-DVE 154
G SP+ + VLK+C + +L L V N++++MY+ C +E
Sbjct: 106 GTSPNEFTLSSVLKSCRNMK-VLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 155 GAARVFDEMRERDVFSWNSMMSCYV-------------------------CNGLSQRAVE 189
A +F +++ ++ +W ++++ + C ++ RA
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 190 VLESMRVD----------GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
++S+ G + ++ N+++D YCR G +SEA F +++D ++I+W T
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
LIS +L +F+ + G V P+ + ++ +C + AL G+++HG
Sbjct: 285 LISELER-SDSSEALLMFQRFESQGFV-PNCYTFTSLVAACANIAALNCGQQLHG 337
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 128/281 (45%), Gaps = 12/281 (4%)
Query: 7 LQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNV 66
++A ++ S+ KQ+H ++ G ++ +Y C L A F ++ ++
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
+ ++++ R + + + + +G P+ Y F ++ ACA +AAL
Sbjct: 280 ITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAAL-NCGQQLHG 337
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCNGLSQ 185
++ + N+++DMY+KCG++ + RVF E+ +R ++ SW SMM Y +G
Sbjct: 338 RIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGA 397
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTL 240
AVE+ + M G PD + V+ A GLV + K F ++ +P+ + +
Sbjct: 398 EAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCV 457
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
+ +GR G +G E+V PD +L +C+
Sbjct: 458 V---DLLGRAG-KIGEAYELVERMPFKPDESTWGAILGACK 494
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 137/323 (42%), Gaps = 38/323 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCD-DLRSAHSLFRQL 61
L+S+L++C K L +H ++ G + ++ +YA C + +A +FR +
Sbjct: 114 LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI 173
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
N +T+++ + G ++ Y +M + Y ++A A + + +
Sbjct: 174 KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS-VTTG 232
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMS----- 176
+L V NS+LD+Y +CG + A F EM ++D+ +WN+++S
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS 292
Query: 177 --------------------CYVCNGLSQRAVEVLE---------SMRVDGCEPDVVTRN 207
CY L + + G +V N
Sbjct: 293 DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELAN 352
Query: 208 TVMDAYCRMGLVSEASKVFEQIKD-PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
++D Y + G + ++ +VF +I D N++SWT+++ GY S G ++ +F +MV+ G +
Sbjct: 353 ALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG-I 411
Query: 267 FPDAGALSGVLVSCRCLGALASG 289
PD VL +CR G + G
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKG 434
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 212 AYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAG 271
+Y GLV EA +F+++ D +V++WT +I+GY+S + + F EMV G P+
Sbjct: 54 SYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG-TSPNEF 112
Query: 272 ALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYA 318
LS VL SCR + LA G +HG +K+ M G ++ + A++ +YA
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDN---AMMNMYA 157
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 9/207 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL- 61
SL+ AC+ +LN +QLH + G ++ LI +YA C ++ + +F ++
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ N+ ++TS++ + HG + +E + +M G+ PD VF VL AC + +
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMM---SC 177
D + N V+D+ + G + A + + M + D +W +++
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKA 495
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVV 204
+ NGL R L + +V +P +V
Sbjct: 496 HKHNGLISR----LAARKVMELKPKMV 518
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 30/267 (11%)
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS-PDGYVFPKVLKACAQLA 115
+F ++P P + + ++ +S L + + M G++ PD Y FP V+K C+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSN-N 123
Query: 116 ALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMM 175
+ D+ V S +D Y KC D+ A +VF EM ER+ SW +++
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 176 SCYVCNGLSQRAVEVLESMR----------VDGC-----------------EPDVVTRNT 208
YV +G + A + + M VDG + D+++ +
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTS 243
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
++D Y + G + A +FE+ + +V +W+ LI GY+ G+ + +F EM V P
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKN-VKP 302
Query: 269 DAGALSGVLVSCRCLGALASGKEIHGY 295
D + G++ +C +G +++ Y
Sbjct: 303 DEFIMVGLMSACSQMGCFELCEKVDSY 329
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 4/227 (1%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+L+ S L AK+L M R T +I YA D+ SA LF +
Sbjct: 211 NALVDGLVKSGDLVNAKKLFDEM----PKRDIISYTSMIDGYAKGGDMVSARDLFEEARG 266
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+V A+++++ ++++G + + ++EM K V PD ++ ++ AC+Q+
Sbjct: 267 VDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKV 326
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
V +++DM +KCG ++ AA++F+EM +RD+ S+ SMM +G
Sbjct: 327 DSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGC 386
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
A+ + E M +G PD V ++ + LV E + FE ++
Sbjct: 387 GSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMR 433
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 43/315 (13%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L+ CS + +Q KQ+H ++ H +LI + + + + A +F QL P+
Sbjct: 26 FLRTCS---NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP-DGYVFPKVLKACAQLAALLEXXXXX 124
F + ++ S + R+ + + M S D + FP V+KAC ++ +
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLA-SSSIRLGTQV 141
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
D+ N+++D+Y KCG + +VFD+M R + SW +M+ V N
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNS-- 199
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGY 244
++D E VF Q+ NV+SWT +I+ Y
Sbjct: 200 ----------QLDSAEI-----------------------VFNQMPMRNVVSWTAMITAY 226
Query: 245 SSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEI 304
R + +FR M D V P+ + +L + LG+L+ G+ +H Y K G +
Sbjct: 227 VKNRRPDEAFQLFRRMQVDD-VKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHK--NGFV 283
Query: 305 FYRSAGAALLTLYAR 319
G AL+ +Y++
Sbjct: 284 LDCFLGTALIDMYSK 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 33/256 (12%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC----------------- 48
+++AC AS S+ Q+H + G FF L+ +Y C
Sbjct: 125 VIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRS 184
Query: 49 --------------DDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
L SA +F Q+P NV ++T+++ + ++ + + + M+
Sbjct: 185 IVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQV 244
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
V P+ + +L+A QL +L D + +++DMYSKCG ++
Sbjct: 245 DDVKPNEFTIVNLLQASTQLGSL-SMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQ 303
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG-CEPDVVTRNTVMDAY 213
A +VFD M+ + + +WNSM++ +G + A+ + E M + EPD +T V+ A
Sbjct: 304 DARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSAC 363
Query: 214 CRMGLVSEASKVFEQI 229
G V + + F ++
Sbjct: 364 ANTGNVKDGLRYFTRM 379
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 38/286 (13%)
Query: 49 DDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVL 108
+ + A S+FR + P F F +++ + + + Y EM +G PD + +P +L
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 109 KACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV 168
KAC +L ++ E D+ V NS+++MY +CG++E ++ VF+++ +
Sbjct: 140 KACTRLKSIRE-GKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 169 FSWNSMMSCYVCNGL------------SQRAVEVLES------------------MRVDG 198
SW+SM+S G+ S+ ++ ES M + G
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 199 ------CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
E +++ + +++D Y + G + +A +F++++ N ++++ +ISG + G
Sbjct: 259 FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 253 SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
+L +F +M+ +G+ PD VL +C G + G+ + LK
Sbjct: 319 ALRMFSKMIKEGLE-PDHVVYVSVLNACSHSGLVKEGRRVFAEMLK 363
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 116/236 (49%), Gaps = 13/236 (5%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL+AC+ KS+ + KQ+H + G F LI +Y C ++ + ++F +L
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKT 197
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPK------VLKACAQLAALLE 119
+++S+++ + G+ +C+ + F+G+ + + + L ACA AL
Sbjct: 198 AASWSSMVSARAGMGMWSECL-----LLFRGMCSETNLKAEESGMVSALLACANTGAL-N 251
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
++ V S++DMY KCG ++ A +F +M +R+ ++++M+S
Sbjct: 252 LGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLA 311
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF-EQIKDPNV 234
+G + A+ + M +G EPD V +V++A GLV E +VF E +K+ V
Sbjct: 312 LHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKV 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 2/199 (1%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S L AC+ + +LN +H ++L + S T L+ +Y C L A +F+++ +
Sbjct: 239 SALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR 298
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
N ++++++ + HG + +++M +G+ PD V+ VL AC+ + E
Sbjct: 299 NNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVF 358
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMS-CYVCNG 182
++D+ + G +E A + E++ W + +S C V
Sbjct: 359 AEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQN 418
Query: 183 LSQRAVEVLESMRVDGCEP 201
+ + E +++ P
Sbjct: 419 IELGQIAAQELLKLSSHNP 437
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 47/268 (17%)
Query: 51 LRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA 110
+ A +F Q+P P+V +T ++ ++R + + EM +
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR--------------- 95
Query: 111 CAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS 170
D+ NS++ +CGD+ A ++FDEM ER V S
Sbjct: 96 -------------------------DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVS 130
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
W +M++ +G +A + M V D N+++ Y + G V +A K+F+Q+
Sbjct: 131 WTAMVNGCFRSGKVDQAERLFYQMPV----KDTAAWNSMVHGYLQFGKVDDALKLFKQMP 186
Query: 231 DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
NVISWTT+I G R G +L +F+ M+ + + + V+ +C A G
Sbjct: 187 GKNVISWTTMICGLDQNERSGEALDLFKNMLR-CCIKSTSRPFTCVITACANAPAFHMGI 245
Query: 291 EIHGYGLKIMPGEIFYRSAGAALLTLYA 318
++HG +K+ G ++ A+L+T YA
Sbjct: 246 QVHGLIIKL--GFLYEEYVSASLITFYA 271
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 123/282 (43%), Gaps = 11/282 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
++ AC+ + + + Q+H ++ G + + + LI YA+C + + +F +
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V +T++L+ +S + + ++ M + P+ F L +C+ L L +
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTL-DWGKEMH 349
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQ 185
D V NS++ MYS G+V A VF ++ ++ + SWNS++ +G +
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 186 RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK------DPNVISWTT 239
A + M EPD +T ++ A G + + K+F + D + +T
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTC 469
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
++ +GR G L E++ +V P+ +L +CR
Sbjct: 470 MV---DILGRCG-KLKEAEELIERMVVKPNEMVWLALLSACR 507
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 131/326 (40%), Gaps = 41/326 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+++ C S ++QA++L + M + + +Q + DD A LF+Q+P
Sbjct: 133 AMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ-FGKVDD---ALKLFKQMPGK 188
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++T+++ ++ + + ++ + M + F V+ ACA A
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN-APAFHMGIQV 247
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V S++ Y+ C + + +VFDE V W +++S Y N
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH 307
Query: 185 QRAVEVLESMRVD-----------------------------------GCEPDVVTRNTV 209
+ A+ + M + G E D N++
Sbjct: 308 EDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSL 367
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+ Y G V++A VF +I +++SW ++I G + GR + IF +M+ PD
Sbjct: 368 VVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE-PD 426
Query: 270 AGALSGVLVSCRCLGALASGKEIHGY 295
+G+L +C G L G+++ Y
Sbjct: 427 EITFTGLLSACSHCGFLEKGRKLFYY 452
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 134/316 (42%), Gaps = 49/316 (15%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
TK+I Y + L A +LF ++P +V ++ S+++ G ++ + EM + V
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV 129
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
+ ++ C + + + D NS++ Y + G V+ A +
Sbjct: 130 S----WTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALK 180
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMR--------------VDGCEPD-- 202
+F +M ++V SW +M+ N S A+++ ++M + C
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 203 ----------VVTRNTVMDAYCRMGLVS---------EASKVFEQIKDPNVISWTTLISG 243
++ + + Y L++ ++ KVF++ V WT L+SG
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSG 300
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPG 302
YS +H +L IF M+ + + P+ + L SC LG L GKE+HG +K+ +
Sbjct: 301 YSLNKKHEDALSIFSGMLRNS-ILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLET 359
Query: 303 EIFYRSAGAALLTLYA 318
+ F G +L+ +Y+
Sbjct: 360 DAF---VGNSLVVMYS 372
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 5/227 (2%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NSL+ K +++A +L M + T +I+ ++ ++ LF +P+
Sbjct: 345 NSLITGLVQRKQISEAYELFEKM----PGKDMVSWTDMIKGFSGKGEISKCVELFGMMPE 400
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
+ +T++++ +G + + + +M K V P+ Y F VL A A LA L+E
Sbjct: 401 KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI 460
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
DL V NS++ MY KCG+ A ++F + E ++ S+N+M+S Y NG
Sbjct: 461 HGRVVKMNIVN-DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGF 519
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
++A+++ + G EP+ VT ++ A +G V K F+ +K
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 7/262 (2%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-V 97
+ ++ Y + A SLF ++ + NV +T+++ + + G + MR +G V
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 98 SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
+ + KAC E DL + NS++ MYSK G + A
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEF-DLFLGNSLMSMYSKLGYMGEAK 330
Query: 158 RVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG 217
VF M+ +D SWNS+++ V A E+ E M D+V+ ++ + G
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKG 386
Query: 218 LVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
+S+ ++F + + + I+WT +IS + S G + +L F +M+ V P++ S VL
Sbjct: 387 EISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKE-VCPNSYTFSSVL 445
Query: 278 VSCRCLGALASGKEIHGYGLKI 299
+ L L G +IHG +K+
Sbjct: 446 SATASLADLIEGLQIHGRVVKM 467
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 134/280 (47%), Gaps = 16/280 (5%)
Query: 42 IQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDG 101
I +A +L+ A ++FRQ+ ++ ++ ++++ ++ +G + + + EM + +
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYN 116
Query: 102 YVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD 161
+ ++K L E +++ + + G + A ++
Sbjct: 117 AMITAMIKNKCDLGKAYELFCDIPEKNAVSYA--------TMITGFVRAGRFDEAEFLYA 168
Query: 162 E--MRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
E ++ RD + N ++S Y+ G AV V + M V +VV+ ++++ YC+MG +
Sbjct: 169 ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAV----KEVVSCSSMVHGYCKMGRI 224
Query: 220 SEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
+A +F+++ + NVI+WT +I GY G G+F M +G V ++ L+ + +
Sbjct: 225 VDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKA 284
Query: 280 CRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
CR G +IHG + MP E F G +L+++Y++
Sbjct: 285 CRDFVRYREGSQIHGL-VSRMPLE-FDLFLGNSLMSMYSK 322
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 115/271 (42%), Gaps = 46/271 (16%)
Query: 55 HSLFRQLP-QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQ 113
H L ++P + ++F S+++ +S+ G + + M+ K D + ++ Q
Sbjct: 298 HGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQ 353
Query: 114 LAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNS 173
+ E D+ ++ +S G++ +F M E+D +W +
Sbjct: 354 RKQISEAYELFEKMPGK-----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTA 408
Query: 174 MMSCYVCNGLSQRAV-----------------------------EVLESMRVDG------ 198
M+S +V NG + A+ +++E +++ G
Sbjct: 409 MISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMN 468
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
D+ +N+++ YC+ G ++A K+F I +PN++S+ T+ISGYS G +L +F
Sbjct: 469 IVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFS 528
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
+ + G P+ +L +C +G + G
Sbjct: 529 MLESSGKE-PNGVTFLALLSACVHVGYVDLG 558
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
CNS + +++ G+++ A +F +M R + SW +M+S Y NG +A +V + M V
Sbjct: 53 CNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVT 112
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
++ C +G +A ++F I + N +S+ T+I+G+ GR + ++ E
Sbjct: 113 TSYNAMITAMIKNKCDLG---KAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+ F D+ A S VL+S G L +GK
Sbjct: 170 ---TPVKFRDSVA-SNVLLS----GYLRAGK 192
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 11/238 (4%)
Query: 50 DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLK 109
++ A +F + + N ++ +++ H R+G + ++ + M+ +GV P +L
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 110 ACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF 169
CA LA+L D+ V + ++ MY KCG++ + +FD +D+
Sbjct: 340 VCASLASL-HHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII 398
Query: 170 SWNSMMSCYVCNGLSQRAVEVLESMRVDG-CEPDVVTRNTVMDAYCRMGLVSEASKVFEQ 228
WNS++S Y +GL + A++V M + G +P+ VT + A G+V E K++E
Sbjct: 399 MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYES 458
Query: 229 IK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
++ P + ++ GR ++ EM++ V PDA +L +CR
Sbjct: 459 MESVFGVKPITAHYACMVDMLGRAGRFNEAM----EMIDSMTVEPDAAVWGSLLGACR 512
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 20/316 (6%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N L+ + +++A+++ M R T L++ Y + A SLF ++P+
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLM----PERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N ++T +L + G + Y + PD + + E
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMI------PDK---DNIARTSMIHGLCKEGRVD 189
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ +++ Y + V+ A ++FD M E+ SW SM+ YV NG
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGR 249
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISG 243
+ A E+ E M V +P V+ N ++ + G +++A +VF+ +K+ N SW T+I
Sbjct: 250 IEDAEELFEVMPV---KP-VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKI 305
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGE 303
+ G +L +F M G V P L +L C L +L GK++H ++
Sbjct: 306 HERNGFELEALDLFILMQKQG-VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV 364
Query: 304 IFYRSAGAALLTLYAR 319
Y + L+T+Y +
Sbjct: 365 DVY--VASVLMTMYIK 378
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 121/325 (37%), Gaps = 79/325 (24%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
S++ +++A+++ M S R T ++ Y + + A +F +P+
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEM----SERSVITWTTMVTGYGQNNRVDDARKIFDVMPE 231
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
++TS+L + ++G E + M K V
Sbjct: 232 KTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI------------------------- 266
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
CN+++ + G++ A RVFD M+ER+ SW +++ + NG
Sbjct: 267 ---------------ACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGF 311
Query: 184 SQRAVEVLESMRVDGCEP-----------------------------------DVVTRNT 208
A+++ M+ G P DV +
Sbjct: 312 ELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASV 371
Query: 209 VMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
+M Y + G + ++ +F++ ++I W ++ISGY+S G +L +F EM G P
Sbjct: 372 LMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 269 DAGALSGVLVSCRCLGALASGKEIH 293
+ L +C G + G +I+
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIY 456
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 148 SKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD--VVT 205
S+ G + A ++FD + + SWNSM++ Y N + + A ++ + M PD +++
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDRNIIS 81
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
N ++ Y + G + EA KVF+ + + NV+SWT L+ GY G+ V+ +F +M
Sbjct: 82 WNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM 136
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 10/259 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L C++ SL+ KQ+H ++ + + L+ +Y C +L + +F + P
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP 393
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG-VSPDGYVFPKVLKACAQLAALLEXX 121
++ + SI++ ++ HGL + ++ + EM G P+ F L AC+ + E
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVC 180
++DM + G A + D M E D W S++ C
Sbjct: 454 KIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA--C 511
Query: 181 NGLSQRAVEVLESMRVDGCEPD----VVTRNTVMDAYCRMGLVSEASKVFEQ--IKDPNV 234
SQ V + ++ EP+ + + + + R V+E K+ + ++
Sbjct: 512 RTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPG 571
Query: 235 ISWTTLISGYSSVGRHGVS 253
SWT + + + R G++
Sbjct: 572 CSWTEVENKVHAFTRGGIN 590
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 14/235 (5%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAE-MR 93
T LI +A+ R A ++F+++ + P + + IL + G I + E M+
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 94 FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
G++PD Y + L C + +L + D N++LD+Y K
Sbjct: 272 SDGIAPDAYTY-NTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 154 EGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
+ A +V +EM + ++NS++S Y +G+ A+E+ M G +PDV T T+
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 210 MDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREM 260
+ + R G V A +FE++++ PN+ ++ I Y + G+ + IF E+
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 138/328 (42%), Gaps = 23/328 (7%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP- 62
N+L+ C +A Q+ M G L+ +Y + A + ++
Sbjct: 283 NTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVL 342
Query: 63 ---QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
P++ + S+++ ++R G+ + +E +M KG PD + + +L + A +E
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER-AGKVE 401
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMM 175
++ N+ + MY G ++FDE+ D+ +WN+++
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD---- 231
+ + NG+ V + M+ G P+ T NT++ AY R G +A V+ ++ D
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
P++ ++ T+++ + G S + EM DG P+ L C L A A+GKE
Sbjct: 522 PDLSTYNTVLAALARGGMWEQSEKVLAEM-EDGRCKPNE------LTYCSLLHAYANGKE 574
Query: 292 I---HGYGLKIMPGEIFYRSAGAALLTL 316
I H ++ G I R+ L L
Sbjct: 575 IGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 60/285 (21%)
Query: 32 HRKPFFTTKLIQIYADCDDLRSAHSLFRQL----PQPNVFAFTSILAFHSRHGLARQCIE 87
R+ F T LI Y+ C A +++R++ P++ + ++LA +R G+ Q +
Sbjct: 488 ERETFNT--LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 545
Query: 88 TYAEMRFKGVSPDGYVFPKVLKACAQLAA------------------------------- 116
AEM DG P L C+ L A
Sbjct: 546 VLAEME------DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 117 ---------LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER- 166
LL D+ NS++ +Y + V A V D M+ER
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 167 ---DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEAS 223
+ ++NS+M + + ++ E+L + G +PD+++ NTV+ AYCR + +AS
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 224 KVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
++F ++++ P+VI++ T I Y++ ++G+ R M+ G
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 9/141 (6%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVL 191
D V ++ M K G V AA +F+ ++E DV+S+ S++S + +G + AV V
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 192 ESMRVDGCEPDVVTRNTVMDAYCRMGLV-SEASKVFEQIKD----PNVISWTTLISGYSS 246
+ M DGC+P ++T N +++ + +MG ++ + + E++K P+ ++ TLI+
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 247 VGRHGVSLGIFREMVNDGMVF 267
H + +F EM G +
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSY 312
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
L+ + + CD L A F +L + P++ S+++ + R + + M+ +G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
+P + ++ ++ +A D+ N+V+ Y + + A
Sbjct: 660 FTPSMATYNSLMYMHSR-SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 157 ARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
+R+F EMR DV ++N+ + Y + + + A+ V+ M GC P+ T N+++D
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Query: 213 YCRMGLVSEASKVFEQIKD 231
YC++ EA E +++
Sbjct: 779 YCKLNRKDEAKLFVEDLRN 797
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 10/291 (3%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S L ACS S+ + + +Q+H + +G + + L+ +Y+ C + A ++F +
Sbjct: 261 SALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEV 320
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ + T IL +++G + I+ + M GV D V VL + + L
Sbjct: 321 DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL-GVSFIDNSLGLGKQL 379
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
+ V N +++MYSKCGD+ + VF M +R+ SWNSM++ + +G
Sbjct: 380 HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHG 439
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTT 239
A+++ E M +P VT +++ A +GL+ + ++ ++K +P +T
Sbjct: 440 LAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTC 499
Query: 240 LISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+I +GR G+ L + ++ + PD +L +C G G+
Sbjct: 500 II---DMLGRAGL-LKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGE 546
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 8/244 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
++++L SL KQLH ++ F LI +Y+ C DL + ++FR++P
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP 419
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ N ++ S++A +RHG ++ Y EM V P F +L AC+ + + +
Sbjct: 420 KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRE 479
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCN 181
++DM + G ++ A D + + D W +++ +
Sbjct: 480 LLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFH 539
Query: 182 G---LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWT 238
G + + A E L D ++ N Y G E +K +++K V T
Sbjct: 540 GDTEVGEYAAEQLFQTAPDSSSAHILIANI----YSSRGKWKERAKTIKRMKAMGVTKET 595
Query: 239 TLIS 242
+ S
Sbjct: 596 GISS 599
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 129/295 (43%), Gaps = 48/295 (16%)
Query: 7 LQACSASKSLN-QAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP- 64
++ SA K+ + +Q+H + G + T L+ Y+ D+ A +F + P+
Sbjct: 71 IKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQ 130
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEXXXX 123
N+ +T++++ ++ + + + IE + M + + DG + L ACA L A+ +
Sbjct: 131 NIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIY 190
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
DL + NS+L+MY K G+ E A ++FDE +DV ++ SM+ Y NG
Sbjct: 191 SRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQ 250
Query: 184 SQRAVEVLESMR-VDGCEPDVVTRNTV--------------------------------- 209
+Q ++E+ + M+ +D + V+T N V
Sbjct: 251 AQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKP 310
Query: 210 --------MDAYCRMGLVSEASKVFEQIK-DPNVISWTTLISGYSSVGRHGVSLG 255
+D +CR G + +A + Q+ PN + W TL+ S G V LG
Sbjct: 311 REAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHG--NVELG 363
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 5/216 (2%)
Query: 19 AKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ--PNVFAFTSILAFH 76
KQ+H L + + LI Y C ++ +F ++ + NV + S+++ +
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV-TWNSMISGY 594
Query: 77 SRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXD 136
+ L + ++ M G D +++ VL A A +A L E D
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATL-ERGMEVHACSVRACLESD 653
Query: 137 LRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
+ V ++++DMYSKCG ++ A R F+ M R+ +SWNSM+S Y +G + A+++ E+M++
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKL 713
Query: 197 DG-CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
DG PD VT V+ A GL+ E K FE + D
Sbjct: 714 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSD 749
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 133/324 (41%), Gaps = 38/324 (11%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S L +C++ K +Q+H L G + L+ +YA+ L +F +P
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 63 QPNVFAFTSILAFHSRHGLA-RQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ + ++ SI+ +R + + + + + G + F VL A + E
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA-VSSLSFGELG 536
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE-RDVFSWNSMMSCYVC 180
+ N+++ Y KCG+++G ++F M E RD +WNSM+S Y+
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 181 NGLSQRAVEVL-----------------------------ESMRVDGC------EPDVVT 205
N L +A++++ M V C E DVV
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+ ++D Y + G + A + F + N SW ++ISGY+ G+ +L +F M DG
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716
Query: 266 VFPDAGALSGVLVSCRCLGALASG 289
PD GVL +C G L G
Sbjct: 717 TPPDHVTFVGVLSACSHAGLLEEG 740
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 151/361 (41%), Gaps = 53/361 (14%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S +Q+C + A+ H + + + + LI Y + D SA +F ++P
Sbjct: 8 SFVQSCVGHRG--AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-LEXXXX 123
N ++ I++ +SR+G ++ + +M +G+ + Y F VL+AC ++ ++ +
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKC-GDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D V N ++ MY KC G V A F ++ ++ SWNS++S Y G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 183 LSQRAVEVLESMRVDG------------------CEPDVVTRNTVM-------------- 210
+ A + SM+ DG EPDV +M
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFV 245
Query: 211 -----DAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
A+ + G +S A KVF Q++ N ++ L+ G + +F +M +
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID 305
Query: 266 VFPDAGALSGVLVSCRCLGALAS------GKEIHGYGLKIMPGEI-FYRSAGAALLTLYA 318
V P++ +L+S +LA G+E+HG+ I G + F G L+ +YA
Sbjct: 306 VSPESYV---ILLSSFPEYSLAEEVGLKKGREVHGH--VITTGLVDFMVGIGNGLVNMYA 360
Query: 319 R 319
+
Sbjct: 361 K 361
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 143/360 (39%), Gaps = 49/360 (13%)
Query: 5 SLLQACSASKSLNQ--AKQLHHYMLLHGSHRKPFFTTKLIQIYADC-DDLRSAHSLFRQL 61
S+L+AC S+ +Q+H M + LI +Y C + A F +
Sbjct: 107 SVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDI 166
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPK-VLKACAQLAALLEX 120
N ++ SI++ +S+ G R ++ M++ G P Y F V AC+ +
Sbjct: 167 EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRL 226
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVC 180
DL V + ++ ++K G + A +VF++M R+ + N +M V
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Query: 181 NGLSQRAVEVLESMR--VDGCEPD-----------------------------VVTR--- 206
+ A ++ M +D P+ V+T
Sbjct: 287 QKWGEEATKLFMDMNSMID-VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV 345
Query: 207 -------NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
N +++ Y + G +++A +VF + D + +SW ++I+G G ++ ++
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 260 MVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
M + P + L L SC L G++IHG LK+ G S AL+TLYA
Sbjct: 406 MRRHD-ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL--GIDLNVSVSNALMTLYAE 462
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 96/247 (38%), Gaps = 43/247 (17%)
Query: 36 FFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMR-F 94
F + L+ +A L A +F Q+ N ++ R + + + +M
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 95 KGVSPDGYV-----FPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSK 149
VSP+ YV FP+ + A+ L + + + N +++MY+K
Sbjct: 304 IDVSPESYVILLSSFPEY--SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 150 CGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD------------ 197
CG + A RVF M ++D SWNSM++ NG AVE +SMR
Sbjct: 362 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 198 -----------------------GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
G + +V N +M Y G ++E K+F + + +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 235 ISWTTLI 241
+SW ++I
Sbjct: 482 VSWNSII 488
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 127/317 (40%), Gaps = 43/317 (13%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD 100
L+ +YA C + A +F + + ++ S++ ++G + +E Y MR + P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 101 GYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF 160
+ L +CA L + ++ V N+++ +Y++ G + ++F
Sbjct: 415 SFTLISSLSSCASLK-WAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 161 DEMRERDVFSWNSMM-----------SCYVCNGLSQRAVEVLESMRV------------- 196
M E D SWNS++ VC +QRA + L +
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG 533
Query: 197 ------------DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-PNVISWTTLISG 243
+ + T N ++ Y + G + K+F ++ + + ++W ++ISG
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPG 302
Y +L + M+ G D+ + VL + + L G E+H ++ +
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRL-DSFMYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 303 EIFYRSAGAALLTLYAR 319
++ G+AL+ +Y++
Sbjct: 653 DVV---VGSALVDMYSK 666
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 20/268 (7%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS 98
T LI Y + A SLFR +P+ +V + +++ S+ G + + T+ +M +GV
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 99 -PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
P+ FP + A + +A+ ++ V NS++ YSKCG++E +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 158 RVFDEMRE--RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD-GCEPDVVTRNTVMDAYC 214
F+++ E R++ SWNSM+ Y NG + AV + E M D P+ VT V+ A
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 215 RMGLVSEA----SKVFEQIKDPNVIS---WTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
GL+ E +K DPN++ + ++ S GR + + + M D
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD---- 398
Query: 268 PDAGALSGVLVSCRC-----LGALASGK 290
P G +L C+ L LA+ K
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASK 426
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/287 (18%), Positives = 124/287 (43%), Gaps = 38/287 (13%)
Query: 33 RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM 92
+ P +L++ + D D +R+AH +F ++P+ +V + T+++ + + + + +
Sbjct: 26 KSPNSIPELVK-HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRL 84
Query: 93 RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD 152
G+ P+ + F V+ + + ++ ++ V ++VL+ Y K
Sbjct: 85 LCLGIRPNEFTFGTVI-GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLST 143
Query: 153 VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
+ A R FD+ R+ P+VV+ ++
Sbjct: 144 LTDARRCFDDTRD-----------------------------------PNVVSITNLISG 168
Query: 213 YCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
Y + EA +F + + +V++W +I G+S GR+ ++ F +M+ +G+V P+
Sbjct: 169 YLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNEST 228
Query: 273 LSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ + + + +GK IH +K + G+ F +L++ Y++
Sbjct: 229 FPCAITAISNIASHGAGKSIHACAIKFL-GKRFNVFVWNSLISFYSK 274
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 142/325 (43%), Gaps = 23/325 (7%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L +++ ACS + + L + + F +T L+ +Y C L+ A LF ++P
Sbjct: 176 LATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ N+ + +L +S+ GL Q E + ++ K + G ++ C + L E
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWG----TMIDGCLRKNQLDEALV 291
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEG-------AARVFDEMRERDVFSWNSMM 175
++ + + + G +G R FD F +++
Sbjct: 292 YYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYD----FLQATII 347
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
Y + + A++ E+ D + +RN ++ + + G+V +A +VF+Q D ++
Sbjct: 348 HFYAVSNDIKLALQQFEASVKD----HIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
SW +ISGY+ ++L +FREM++ V PDA + V + LG+L GK H Y
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 296 -GLKIMPGEIFYRSAGAALLTLYAR 319
+P + AA++ +YA+
Sbjct: 464 LNFSTIPPN---DNLTAAIIDMYAK 485
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 36/251 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ-- 60
L S L +C++S + +Q+H +L G + ++ +YA C L A S+FR
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 61 -----------------------------LPQPNVFAFTSILAFHSRHGLARQCIETYAE 91
+P+ + ++T+++ ++++ + +E + E
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 92 MRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
MR G+ + V+ AC+ L + + + V ++L MY C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGR-VFVSTNLLHMYCLCL 222
Query: 152 DVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
++ A ++FDEM ER++ +WN M++ Y GL ++A E+ + + E D+V+ T++D
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMID 278
Query: 212 AYCRMGLVSEA 222
R + EA
Sbjct: 279 GCLRKNQLDEA 289
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 123/319 (38%), Gaps = 45/319 (14%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL A + S ++ QLH ++ G F +I YA +D++ A F + +
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKG----------------------------- 96
+ + +++A ++G+ Q E + + K
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMIS 430
Query: 97 ---VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
V PD V A + L +L E D + +++DMY+KCG +
Sbjct: 431 SSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPND-NLTAAIIDMYAKCGSI 489
Query: 154 EGAARVFDEMRE---RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
E A +F + + + WN+++ +G ++ A+++ ++ +P+ +T V+
Sbjct: 490 ETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVL 549
Query: 211 DAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
A C GLV FE +K +P++ + ++ GR L +EM+
Sbjct: 550 SACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGR----LEEAKEMIKKMP 605
Query: 266 VFPDAGALSGVLVSCRCLG 284
V D +L + R G
Sbjct: 606 VKADVMIWGMLLSASRTHG 624
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 37/168 (22%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
+CNSVL+MY+KC + A VF D
Sbjct: 78 ICNSVLNMYAKCRLLADAESVFR-----------------------------------DH 102
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFR 258
+ D + N ++D Y R + +A K+F+ + + + +S+TTLI GY+ + ++ +FR
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 259 EMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIF 305
EM N G++ + L+ V+ +C LG + + + +K+ + G +F
Sbjct: 163 EMRNLGIMLNEV-TLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVF 209
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 4/182 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ---L 61
S+ A S+ SL + K+ H Y+ T +I +YA C + +A ++F Q +
Sbjct: 443 SVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNI 502
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ + +I+ + HG A+ ++ Y++++ + P+ F VL AC +
Sbjct: 503 SSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGK 562
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVC 180
D++ ++D+ K G +E A + +M + DV W ++S
Sbjct: 563 TYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRT 622
Query: 181 NG 182
+G
Sbjct: 623 HG 624
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 41/313 (13%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
++L S+ KSL K++H +L +GS+ F ++ ++ +Y C +++ A S
Sbjct: 265 AVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFG 324
Query: 65 NVFAFTSILAFHSRHGL---ARQCIETYAEMR-------FKGV----------------- 97
N+++ +S++ +S G A++ ++ +E F G
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFI 384
Query: 98 -----SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD 152
+PD V VL AC+ L A +E D ++ + +DMYSKCG+
Sbjct: 385 ANETNTPDSLVMVSVLGACS-LQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGN 443
Query: 153 VEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
VE A R+FD ERD +N+M++ +G ++ + E M G +PD +T ++ A
Sbjct: 444 VEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
Query: 213 YCRMGLVSEASKVFEQIKD-----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
GLV E K F+ + + P +T +I Y R ++ + M V
Sbjct: 504 CRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIEL---MEGIDQVE 560
Query: 268 PDAGALSGVLVSC 280
DA L L +C
Sbjct: 561 KDAVILGAFLNAC 573
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 45/301 (14%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP- 62
N L+ S S L +A+ + ML R + +I Y ++++ A LF
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEML----ERNVYSWNAVIAAYVKFNNVKEARELFESDNC 82
Query: 63 QPNVFAFTSILA-FHSRHGLARQCIETYAEMRFK---GVSPDGYVFPKVLKACAQLAALL 118
+ ++ + ++L+ F G + IE + EM K + D + ++K A+L +
Sbjct: 83 ERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVF 142
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
V +S++ MYSKCG F E
Sbjct: 143 YGEQLHGVLVKTGNDGTKFAV-SSLIHMYSKCGK-------FKE---------------- 178
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN-VISW 237
VCN + VE ++S V RN ++ AYCR G + +A VF + + N ISW
Sbjct: 179 VCNIFNGSCVEFVDS----------VARNAMIAAYCREGDIDKALSVFWRNPELNDTISW 228
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
TLI+GY+ G +L + M +G+ + D + VL L +L GKE+H L
Sbjct: 229 NTLIAGYAQNGYEEEALKMAVSMEENGLKW-DEHSFGAVLNVLSSLKSLKIGKEVHARVL 287
Query: 298 K 298
K
Sbjct: 288 K 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 92/229 (40%), Gaps = 5/229 (2%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S+L ACS + K++H + L G T + +Y+ C ++ A +F +
Sbjct: 398 SVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFER 457
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+ + +++A + HG + + + +M G PD F +L AC +LE
Sbjct: 458 DTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYF 517
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFD--EMRERDVFSWNSMMSCYVCNG 182
+ ++D+Y K ++ A + + + E+D + ++ N
Sbjct: 518 KSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNK 577
Query: 183 LSQRAVEVLESMRV-DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
++ EV E + V +G + + +AY G E ++ Q++
Sbjct: 578 NTELVKEVEEKLLVIEGSNGSRYIQ--IANAYASSGRWDEMQRIRHQMR 624
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 127/293 (43%), Gaps = 10/293 (3%)
Query: 14 KSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSIL 73
K + + K++H +++ G + L+ +Y C + A ++F ++ + +V ++TS++
Sbjct: 232 KCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMI 291
Query: 74 AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXX 133
+ + R+ ++E+ P+ Y F VL ACA L E
Sbjct: 292 DRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTE-ELGKQVHGYMTRVGF 350
Query: 134 XXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLES 193
+S++DMY+KCG++E A V D + D+ SW S++ NG A++ +
Sbjct: 351 DPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDL 410
Query: 194 MRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVIS-----WTTLISGYSSVG 248
+ G +PD VT V+ A GLV + + F I + + +S +T L+ + G
Sbjct: 411 LLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSG 470
Query: 249 RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMP 301
R + EM + P + VL C G + +E KI P
Sbjct: 471 RFEQLKSVISEMP----MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEP 519
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
+ P + +++ C+Q AL E + + N +L MY+KCG +
Sbjct: 79 RAKKPPASTYCNLIQVCSQTRAL-EEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLV 137
Query: 155 GAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYC 214
A +VFDEM RD+ SWN M+ + Y
Sbjct: 138 DARKVFDEMPNRDLCSWNVMV-----------------------------------NGYA 162
Query: 215 RMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
+GL+ EA K+F+++ + + SWT +++GY + +L ++ M P+ +S
Sbjct: 163 EVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVS 222
Query: 275 GVLVSCRCLGALASGKEIHGY 295
+ + + + GKEIHG+
Sbjct: 223 IAVAAAAAVKCIRRGKEIHGH 243
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 19/247 (7%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L AC+ + KQ+H YM G F ++ L+ +Y C ++ SA + P+P+
Sbjct: 325 VLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPD 384
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX-- 123
+ ++TS++ +++G + ++ + + G PD F VL AC A L+E
Sbjct: 385 LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH-AGLVEKGLEFF 443
Query: 124 -XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMM---SCY 178
D C ++D+ ++ G E V EM + F W S++ S Y
Sbjct: 444 YSITEKHRLSHTSDHYTC--LVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY 501
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI--- 235
L++ A + L +++ P VT T+ + Y G E K+ +++++ V
Sbjct: 502 GNIDLAEEAAQEL--FKIEPENP--VTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRP 557
Query: 236 --SWTTL 240
SWT +
Sbjct: 558 GSSWTEI 564
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 14/283 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFT-TKLIQIYADCDDLRSAHSLFRQLP 62
S+L + S + A++ M + KP +I + + ++ A +F +
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPM-----KPVIACNAMIVGFGEVGEISKARRVFDLME 292
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ + ++ + R G + ++ +A+M+ +GV P +L CA LA+L +
Sbjct: 293 DRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL-QYGR 351
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D+ V + ++ MY KCG++ A VFD +D+ WNS++S Y +G
Sbjct: 352 QVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
L + A+++ M G P+ VT ++ A G + E ++FE ++ + T +
Sbjct: 412 LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCV--TPTVE 469
Query: 243 GYS----SVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
YS +GR G + E++ + PDA +L +C+
Sbjct: 470 HYSCTVDMLGRAG-QVDKAMELIESMTIKPDATVWGALLGACK 511
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 146/353 (41%), Gaps = 63/353 (17%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NS++ ++ +A+QL M S R L+ Y + A ++F +P+
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEM----SERNVVSWNGLVSGYIKNRMIVEARNVFELMPE 107
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEM----------RFKGVSPDGYVFPKVLKACAQ 113
NV ++T+++ + + G+ + + M F G+ DG + K K
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRI-DKARKLYDM 166
Query: 114 LAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNS 173
+ D+ +++ + G V+ A +FDEMRER+V +W +
Sbjct: 167 MPV------------------KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTT 208
Query: 174 MMSCYVCNGLSQRAVEVLESM-------------------RVDGCE--------PDVVTR 206
M++ Y N A ++ E M R++ E V+
Sbjct: 209 MITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIAC 268
Query: 207 NTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
N ++ + +G +S+A +VF+ ++D + +W +I Y G +L +F +M G V
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG-V 327
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
P +L +L C L +L G+++H + ++ + Y + L+T+Y +
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVY--VASVLMTMYVK 378
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
Query: 140 CNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGC 199
C+ + S+ G + A + FD ++ + + SWNS++S Y NGL + A ++ + M
Sbjct: 20 CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM----S 75
Query: 200 EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFRE 259
E +VV+ N ++ Y + ++ EA VFE + + NV+SWT ++ GY G G + +F
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 260 M 260
M
Sbjct: 136 M 136
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 51 LRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP-----DGYVFP 105
+ A F L + ++ SI++ + +GL ++ + + EM + V GY+
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKN 92
Query: 106 KVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE 165
+++ + L+ ++ +++ Y + G V A +F M E
Sbjct: 93 RMIVEARNVFELMPER--------------NVVSWTAMVKGYMQEGMVGEAESLFWRMPE 138
Query: 166 RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKV 225
R+ SW M + +G +A ++ + M V DVV ++ CR G V EA +
Sbjct: 139 RNEVSWTVMFGGLIDDGRIDKARKLYDMMPV----KDVVASTNMIGGLCREGRVDEARLI 194
Query: 226 FEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
F+++++ NV++WTT+I+GY R V+ +F M
Sbjct: 195 FDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM 229
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 86/201 (42%), Gaps = 3/201 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+L C+ SL +Q+H +++ + + L+ +Y C +L A +F +
Sbjct: 334 LISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS 393
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ + SI++ ++ HGL + ++ + EM G P+ +L AC+ L E
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLE 453
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCYVCN 181
+ + +DM + G V+ A + + M + D W +++ C
Sbjct: 454 IFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGA--CK 511
Query: 182 GLSQRAVEVLESMRVDGCEPD 202
S+ + + + ++ EPD
Sbjct: 512 THSRLDLAEVAAKKLFENEPD 532
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 139/309 (44%), Gaps = 42/309 (13%)
Query: 14 KSLNQAKQLHHYMLLHG-SHRKPFFTTKL-IQIYADCDDLRSAHSLFRQLPQPNVFAFTS 71
KS+++ ++H ++ G S +PF + L + D+ A+ +L P + +
Sbjct: 19 KSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNF 78
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXX 131
++ S + I Y +M G+ PD +P ++K+ ++L+ +
Sbjct: 79 VIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNR-KLGGSLHCSVVKS 137
Query: 132 XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVL 191
DL +CN+++ MY D A ++FDEM +++ +WNS++ Y +G A V
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVF 197
Query: 192 ESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHG 251
+ M E DVVT ++++D Y + G ++A ++F+Q+ R G
Sbjct: 198 DEM----SERDVVTWSSMIDGYVKRGEYNKALEIFDQMM------------------RMG 235
Query: 252 VSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAG 310
S MV+ V+ +C LGAL GK +H Y L + +P + ++
Sbjct: 236 SSKANEVTMVS-------------VICACAHLGALNRGKTVHRYILDVHLPLTVILQT-- 280
Query: 311 AALLTLYAR 319
+L+ +YA+
Sbjct: 281 -SLIDMYAK 288
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 8/231 (3%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+L+ + + A++L M H+ ++ YA D+ SA +F ++ +
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEM----PHKNLVTWNSILDAYAKSGDVVSARLVFDEMSE 202
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYV-FPKVLKACAQLAALLEXXX 122
+V ++S++ + + G + +E + +M G S V V+ ACA L AL
Sbjct: 203 RDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGAL-NRGK 261
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVF--DEMRERDVFSWNSMMSCYVC 180
+ + S++DMY+KCG + A VF ++E D WN+++
Sbjct: 262 TVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLAS 321
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
+G + ++++ MR +PD +T ++ A GLV EA F+ +K+
Sbjct: 322 HGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKE 372
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 137/330 (41%), Gaps = 45/330 (13%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ L+ AC L KQLH + + G + Y+ LR A S+F +
Sbjct: 143 LSGLIAACCDRVDL--IKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 63 Q-PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ + ++ S++ + +H + + Y EM FKG D + VL A L L+
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI-GG 259
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEG---AARVFDEMRERDVFSWNSMMSCY 178
+ V + ++D YSKCG +G + +VF E+ D+ WN+M+S Y
Sbjct: 260 RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGY 319
Query: 179 VCN-GLSQRAVEVLESMRVDGCEPD----------------------------------- 202
N LS+ AV+ M+ G PD
Sbjct: 320 SMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSN 379
Query: 203 -VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
+ N ++ Y + G + +A VF+++ + N +S+ +I GY+ G +L +++ M+
Sbjct: 380 RISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRML 439
Query: 262 NDGMVFPDAGALSGVLVSCRCLGALASGKE 291
+ G+ P+ VL +C G + G+E
Sbjct: 440 DSGIA-PNKITFVAVLSACAHCGKVDEGQE 468
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 132/289 (45%), Gaps = 15/289 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADC---DDLRSAHSLFR 59
L S+L A ++ L +Q H ++ G H+ + LI Y+ C D + + +F+
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 60 QLPQPNVFAFTSILAFHS-RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
++ P++ + ++++ +S L+ + ++++ +M+ G PD F V AC+ L++
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
+ + V N+++ +Y K G+++ A VFD M E + S+N M+ Y
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGY 422
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPN 233
+G A+ + + M G P+ +T V+ A G V E + F +K +P
Sbjct: 423 AQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE 482
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF-PDAGALSGVLVSCR 281
++ +I G+ + E D M + P + A + +L +CR
Sbjct: 483 AEHYSCMIDLLGRAGKLEEA-----ERFIDAMPYKPGSVAWAALLGACR 526
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 150/389 (38%), Gaps = 84/389 (21%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL A + L K LH + + + + +Y+ C L A + F +PN
Sbjct: 14 LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 66 VFAFTSIL---AFHSRHGLARQCI----------------------ETYA------EMRF 94
VF++ I+ A S+ +ARQ ET+A MR
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
G DG+ ++ AC L++ V N+ + YSK G +
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSS---VNNAFVTYYSKGGLLR 190
Query: 155 GAARVFDEMRE-RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAY 213
A VF M E RD SWNSM+ Y + +A+ + + M G + D+ T +V++A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 214 CRM--------------------------GLVS------------EASKVFEQIKDPNVI 235
+ GL+ ++ KVF++I P+++
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 236 SWTTLISGYS---SVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
W T+ISGYS + V FR+M G PD + V +C L + + K+I
Sbjct: 311 VWNTMISGYSMNEELSEEAVK--SFRQMQRIGHR-PDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 293 HGYGLK--IMPGEIFYRSAGAALLTLYAR 319
HG +K I I S AL++LY +
Sbjct: 368 HGLAIKSHIPSNRI---SVNNALISLYYK 393
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 18/256 (7%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQ--------PNVFAFTSILAFHSRHGLARQCIETYA 90
LI + D L A SLF +L + NV +TS++ + G +E +
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 91 EMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKC 150
+M+F V + +L CA+L AL ++ V N++++MY+KC
Sbjct: 424 QMQFSKVLANSVTICCILSICAELPAL-NLGREIHGHVIRTSMSENILVQNALVNMYAKC 482
Query: 151 GDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
G + + VF+ +R++D+ SWNS++ Y +G +++A+ + + M G PD + V+
Sbjct: 483 GLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVL 542
Query: 211 DAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
A GLV + ++F + +P + ++ VG L E+V +
Sbjct: 543 SACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVG----FLKEASEIVKNMP 598
Query: 266 VFPDAGALSGVLVSCR 281
+ P L +L SCR
Sbjct: 599 MEPKVCVLGALLNSCR 614
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 134/322 (41%), Gaps = 42/322 (13%)
Query: 2 HLNSLLQACSASKSLNQAKQLHHYMLLHG-SHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
+ + LL C ++ Q +Q+H +LL R LI +YA L A ++F
Sbjct: 58 YFDHLLGLCLTAQ---QCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFET 114
Query: 61 LPQ---PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
+ ++ + SIL + HGL +E Y MR +G++ DGY+ P +L+AC L
Sbjct: 115 VSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRF 174
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC 177
+L V N +L +Y K G + A +F EM R+ SWN M+
Sbjct: 175 -GLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKG 233
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISW 237
+ + AV++ E M+ + +PD VT W
Sbjct: 234 FSQEYDCESAVKIFEWMQREEFKPDEVT-------------------------------W 262
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGL 297
T+++S +S G+ L F M G AL+ C L AL+ +++HGY +
Sbjct: 263 TSVLSCHSQCGKFEDVLKYFHLMRMSGNAV-SGEALAVFFSVCAELEALSIAEKVHGYVI 321
Query: 298 KIMPGEIFYRSAGAALLTLYAR 319
K G Y + AL+ +Y +
Sbjct: 322 K--GGFEEYLPSRNALIHVYGK 341
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 37/284 (13%)
Query: 41 LIQIYADCDDLRSAHSLF----RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
+I+ ++ D SA +F R+ +P+ +TS+L+ HS+ G ++ + MR G
Sbjct: 230 MIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSG 289
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
+ G CA+L AL L N+++ +Y K G V+ A
Sbjct: 290 NAVSGEALAVFFSVCAELEAL-SIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDA 348
Query: 157 ARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRM 216
+F ++R + + SWNS+++ +V G A+ + + M+ C +
Sbjct: 349 EHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELE-------------EMNHVCNV 395
Query: 217 GLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGV 276
NV++WT++I G + GR SL FR+M V ++ + +
Sbjct: 396 --------------KANVVTWTSVIKGCNVQGRGDDSLEYFRQM-QFSKVLANSVTICCI 440
Query: 277 LVSCRCLGALASGKEIHGYGLKI-MPGEIFYRSAGAALLTLYAR 319
L C L AL G+EIHG+ ++ M I ++ AL+ +YA+
Sbjct: 441 LSICAELPALNLGREIHGHVIRTSMSENILVQN---ALVNMYAK 481
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 124/299 (41%), Gaps = 47/299 (15%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L C+ ++L+ A+++H Y++ G LI +Y ++ A LFRQ+
Sbjct: 297 LAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR 356
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG----VSPDGYVFPKVLKACAQLAALL 118
+ ++ S++ G + + ++E+ V + + V+K C
Sbjct: 357 NKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGC------- 409
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSC- 177
+ G + + F +M+ V + NS+ C
Sbjct: 410 -----------------------------NVQGRGDDSLEYFRQMQFSKVLA-NSVTICC 439
Query: 178 --YVCNGLSQRAV--EVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPN 233
+C L + E+ + +++ +N +++ Y + GL+SE S VFE I+D +
Sbjct: 440 ILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKD 499
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ISW ++I GY G +L +F M++ G PD AL VL +C G + G+EI
Sbjct: 500 LISWNSIIKGYGMHGFAEKALSMFDRMISSGF-HPDGIALVAVLSACSHAGLVEKGREI 557
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 142/337 (42%), Gaps = 39/337 (11%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
+L ACS +Q+H M+ G+ T LI +Y+ L + +F + + +
Sbjct: 90 VLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKD 149
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ ++L+ R+G ++ + +A M + V + V+K CA L L +
Sbjct: 150 LVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQ---GKQ 206
Query: 126 XXXXXXXXXXDLRVCNS-VLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYVCNGL 183
DL V + ++ YS G + A +V++ + D NS++S + N
Sbjct: 207 VHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRN 266
Query: 184 SQRAVEVLESMRVD---------GCEPD-----------VVTR----------NTVMDAY 213
+ A ++ R + GC + V R N +MD Y
Sbjct: 267 YKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMY 326
Query: 214 CRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM-VFPDAGA 272
+ G + +A +F I +V+SWT++I Y+ G +L IFREM +G V P++
Sbjct: 327 GKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVT 386
Query: 273 LSGVLVSCRCLGALASGKEIHGY---GLKIMPGEIFY 306
V+ +C G + GKE G +++PG Y
Sbjct: 387 FLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHY 423
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 16/275 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+S+++ C++ K L Q KQ+H +++ G T +I Y+ + A ++ L
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 63 -QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+ S+++ R+ ++ + R P+ V L C+ + L
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLW-IG 300
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCN 181
D ++CN ++DMY KCG + A +F + + V SW SM+ Y N
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVN 360
Query: 182 GLSQRAVEVLESM--RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNV 234
G +A+E+ M G P+ VT V+ A GLV E + F +K+ P
Sbjct: 361 GDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGT 420
Query: 235 ISWTTLISGYSSVGR-HGVSLGIFREMVNDGMVFP 268
+ I S G + + R M ND P
Sbjct: 421 EHYVCFIDILSKAGETEEIWRLVERMMENDNQSIP 455
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 54 AHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPD--GYVFPKVLKAC 111
A LF +LPQ ++ + S L+ H R G + + ++ SPD + F VL AC
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF--LQIHRASPDLSSHTFTPVLGAC 94
Query: 112 AQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSW 171
+ L + E +++DMYSK G + + RVF+ + E+D+ SW
Sbjct: 95 S-LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSW 153
Query: 172 NSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI-- 229
N+++S ++ NG + A+ V +M + E T ++V+ + ++ + +V +
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVV 213
Query: 230 --KDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
+D V+ T +IS YSSVG ++ ++ +
Sbjct: 214 TGRDLVVLG-TAMISFYSSVGLINEAMKVYNSL 245
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 38/314 (12%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLF------ 58
SL++A +S S++ LH L G PF T ++ Y + DL S+ +F
Sbjct: 91 SLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNP 150
Query: 59 -------------------------RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM- 92
+++P +V ++T+++ S+ GL + + + EM
Sbjct: 151 CVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMI 210
Query: 93 --RFKGVSPDGYVFPKVLKACAQL-AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSK 149
++P+ F VL +CA + + ++LDMY K
Sbjct: 211 QNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGK 270
Query: 150 CGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
GD+E A +FD++R++ V +WN+++S NG ++A+E+ E M+ P+ +T +
Sbjct: 271 AGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAI 330
Query: 210 MDAYCRMGLVSEASKVFEQIKDPNVISWTTLISG--YSSVGRHGVSLGIFREMVNDGMVF 267
+ A R LV ++F I I T+ G +GR G+ + +
Sbjct: 331 LTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDA-ANFIQSLPFE 389
Query: 268 PDAGALSGVLVSCR 281
PDA L +L +C+
Sbjct: 390 PDASVLGALLGACK 403
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 121/301 (40%), Gaps = 81/301 (26%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTK-----LIQIYADCDDLRSAHSLFRQLPQPNVFAF 69
S NQ KQ+H +L + + TK LI+ Y + +++ +LF
Sbjct: 26 SSNQIKQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALF----------- 74
Query: 70 TSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA-CAQLAALLEXXXXXXXXX 128
T +LA H V P+ FP ++KA C+ + +
Sbjct: 75 THMLASH--------------------VQPNNLTFPSLIKAACSSFS--VSYGVALHGQA 112
Query: 129 XXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAV 188
D V S + Y + GD+E + ++FD++
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDI------------------------- 147
Query: 189 EVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVG 248
P VV N+++DA R G + A + F+++ +V+SWTT+I+G+S G
Sbjct: 148 ----------LNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKG 197
Query: 249 RHGVSLGIFREMVND--GMVFPDAGALSGVLVSCRCL--GALASGKEIHGYGLKIMPGEI 304
H +L +F EM+ + ++ P+ VL SC G + GK+IHGY +M EI
Sbjct: 198 LHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGY---VMSKEI 254
Query: 305 F 305
Sbjct: 255 I 255
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 23/270 (8%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHG-----LARQCIETYAEMR 93
T L+ YA DLR A +F ++P+ + +++ + H AR+ + + R
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFR--R 208
Query: 94 FK----GVSPDGYVFPKVLKACAQLAALLEXXXXX--XXXXXXXXXXXDLRVCNSVLDMY 147
F GV P VL A +Q LLE D+ + +++DMY
Sbjct: 209 FSCCGSGVRPTDTTMVCVLSAISQ-TGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMY 267
Query: 148 SKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRN 207
SKCG + A VF+ M+ ++VF+W SM + NG +L M G +P+ +T
Sbjct: 268 SKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFT 327
Query: 208 TVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGRHGVSLGIFREMVN 262
+++ AY +GLV E ++F+ +K P + + ++ GR + M
Sbjct: 328 SLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMP- 386
Query: 263 DGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ PDA L + +C G G+EI
Sbjct: 387 ---IKPDAILLRSLCNACSIYGETVMGEEI 413
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 133/338 (39%), Gaps = 54/338 (15%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSL-----FR 59
SLLQ SK+L QAKQ+H ++++G H F KLI Y S+ L F
Sbjct: 12 SLLQ--QNSKTLIQAKQIHAQLVINGCHDNSLF-GKLIGHYCSKPSTESSSKLAHLLVFP 68
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ P+ F F ++L R ++ ++ +VF A + ++ L
Sbjct: 69 RFGHPDKFLFNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALR 128
Query: 120 XXXXXXXXXXXXXXXXDLR-VCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
+ + ++L Y+K GD+ A +VFDEM ER +WN+M+ Y
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 179 V---------------------CNGLSQRAVE-----VLESMRVDGC------------- 199
C G R + VL ++ G
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 200 -----EPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSL 254
E DV ++D Y + G ++ A VFE +K NV +WT++ +G + GR +
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 255 GIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ M G + P+ + +L + R +G + G E+
Sbjct: 309 NLLNRMAESG-IKPNEITFTSLLSAYRHIGLVEEGIEL 345
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 10/289 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
LN+L++ S ++ A QL R LI ++ A LF +P
Sbjct: 155 LNTLIRVYSLIAPIDSALQLFD----ENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
++ ++ S+++ +++ R+ I+ + EM G+ PD L ACAQ + +
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ-SGDWQKGK 269
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
D + ++D Y+KCG ++ A +F+ ++ +F+WN+M++ +G
Sbjct: 270 AIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHG 329
Query: 183 LSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLIS 242
+ V+ M G +PD VT +V+ GLV EA +F+Q++ ++
Sbjct: 330 NGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHY 389
Query: 243 GYSS--VGRHGV---SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGAL 286
G + +GR G+ + + +M DG A SG+L CR G +
Sbjct: 390 GCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNI 438
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 42/246 (17%)
Query: 54 AHSLFRQLPQPNVFAFTSIL---AFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA 110
A S+FR + P+ F F +I+ H L+ + + EMR + V PD + FP V KA
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSK--RFFVEMRRRSVPPDFHTFPFVFKA 124
Query: 111 CA-QLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF 169
CA + L DL N+++ +YS ++ A ++FDE +RDV
Sbjct: 125 CAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV- 183
Query: 170 SWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI 229
VT N ++D + + A ++F+ +
Sbjct: 184 ----------------------------------VTYNVLIDGLVKAREIVRARELFDSM 209
Query: 230 KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG 289
+++SW +LISGY+ + ++ +F EMV G+ PD A+ L +C G G
Sbjct: 210 PLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK-PDNVAIVSTLSACAQSGDWQKG 268
Query: 290 KEIHGY 295
K IH Y
Sbjct: 269 KAIHDY 274
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 14/254 (5%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
T L+ +A A +F QL + P+V+ + +++ +SR G E ++ M+
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
G PD + ++ A + A L ++ +L YSK DV
Sbjct: 385 MGCEPDRASYNIMVDAYGR-AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 155 GAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
+ EM E D F NSM++ Y G + ++L M C D+ T N ++
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 503
Query: 211 DAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+ Y + G + ++F ++K+ P+V++WT+ I YS + L +F EM++ G
Sbjct: 504 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 563
Query: 267 FPDAGALSGVLVSC 280
PD G +L +C
Sbjct: 564 -PDGGTAKVLLSAC 576
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 15/240 (6%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
LI Y + A SL+ QL + P + ++ + GL + EM+
Sbjct: 183 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHH 242
Query: 97 VSPDGY---VFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
VSP V+ ++ + E N ++++Y K
Sbjct: 243 VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 302
Query: 154 EGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
+ +++ EMR + ++ ++ ++++ + GL ++A E+ E ++ DG EPDV N +
Sbjct: 303 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 362
Query: 210 MDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
M++Y R G A+++F ++ +P+ S+ ++ Y G H + +F EM G+
Sbjct: 363 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI 422
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 14/254 (5%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
T L+ +A A +F QL + P+V+ + +++ +SR G E ++ M+
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
G PD + ++ A + A L ++ +L YSK DV
Sbjct: 363 MGCEPDRASYNIMVDAYGR-AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 155 GAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
+ EM E D F NSM++ Y G + ++L M C D+ T N ++
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 481
Query: 211 DAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+ Y + G + ++F ++K+ P+V++WT+ I YS + L +F EM++ G
Sbjct: 482 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 541
Query: 267 FPDAGALSGVLVSC 280
PD G +L +C
Sbjct: 542 -PDGGTAKVLLSAC 554
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 15/240 (6%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
LI Y + A SL+ QL + P + ++ + GL + EM+
Sbjct: 161 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHH 220
Query: 97 VSPDGY---VFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDV 153
VSP V+ ++ + E N ++++Y K
Sbjct: 221 VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 280
Query: 154 EGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
+ +++ EMR + ++ ++ ++++ + GL ++A E+ E ++ DG EPDV N +
Sbjct: 281 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 340
Query: 210 MDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
M++Y R G A+++F ++ +P+ S+ ++ Y G H + +F EM G+
Sbjct: 341 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI 400
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 113/245 (46%), Gaps = 11/245 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM--RFKGVS 98
+I Y D++SA LFR + + + + +++A ++++G + ++ +A+M R +
Sbjct: 269 MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQ 328
Query: 99 PDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAAR 158
PD V+ A +QL DL + S++D+Y K GD A +
Sbjct: 329 PDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDL-LSTSLIDLYMKGGDFAKAFK 387
Query: 159 VFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGL 218
+F + ++D S+++M+ NG++ A + +M P+VVT ++ AY GL
Sbjct: 388 MFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGL 447
Query: 219 VSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALS 274
V E K F +KD P+ + ++ GR L E++ + P+AG
Sbjct: 448 VQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGR----LEEAYELIKSMPMQPNAGVWG 503
Query: 275 GVLVS 279
+L++
Sbjct: 504 ALLLA 508
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 114/245 (46%), Gaps = 11/245 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHG-SHRKPFFTTKLIQIYADC--DDLRSAHSLFR 59
L LQ C L QAKQ+H ++++ +H +P + + + + + + +
Sbjct: 6 LRFFLQRCVV---LEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILK 62
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ F++ ++ F S+H ++ ++ Y +M G+ P + VL+AC ++ +++
Sbjct: 63 GFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVD 122
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYV 179
+ V ++ +YS+ G +E A + FD++ E++ SWNS++ Y+
Sbjct: 123 GKPIHAQALKNGLCGC-VYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYL 181
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
+G A V + + E D V+ N ++ +Y + G + A +F + + SW
Sbjct: 182 ESGELDEARRVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI 237
Query: 240 LISGY 244
LI GY
Sbjct: 238 LIGGY 242
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 120/287 (41%), Gaps = 30/287 (10%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
+ S+L+AC +++ K +H L +G + T L+ +Y+ + A F +
Sbjct: 107 VTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIA 166
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLK------ACAQLAA 116
+ N ++ S+L + G + + ++ K + K AC+ +A
Sbjct: 167 EKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSA 226
Query: 117 L-LEXXXXXXXXXXXXXXXXDLRVCNSVLDM---------------YSKCGDVEGAARVF 160
+ L+ ++++ + D Y+K GDV+ A +F
Sbjct: 227 MPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELF 286
Query: 161 DEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM--RVDGCEPDVVTRNTVMDAYCRMGL 218
M ++D +++M++CY NG + A+++ M R +PD +T ++V+ A ++G
Sbjct: 287 RLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGN 346
Query: 219 VS-----EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
S E+ IK +++S T+LI Y G + +F +
Sbjct: 347 TSFGTWVESYITEHGIKIDDLLS-TSLIDLYMKGGDFAKAFKMFSNL 392
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 116/256 (45%), Gaps = 15/256 (5%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
T LI + + + A S+ Q+ + P+V +T+I+ ++G + + +M
Sbjct: 146 TSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN 205
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
G+ PD ++ ++ + D+ N+++D + K G
Sbjct: 206 YGIRPDVVMYTSLVNGLCN-SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 155 GAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
A +++EM ++F++ S+++ + G A ++ M GC PDVV +++
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 211 DAYCRMGLVSEASKVFEQIKDP----NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+ +C+ V +A K+F ++ N I++TTLI G+ VG+ V+ +F MV+ G+
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV- 383
Query: 267 FPDAGALSGVLVSCRC 282
P VL+ C C
Sbjct: 384 -PPNIRTYNVLLHCLC 398
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 113/276 (40%), Gaps = 51/276 (18%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
SL+ +++A+Q+ + M G T LI + C + A +F ++ Q
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 65 ----NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
N +T+++ + G E ++ M +GV P+
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN-------------------- 386
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD-------VFSWNS 173
+R N +L G V+ A +F++M++R+ ++++N
Sbjct: 387 ----------------IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-- 231
++ NG ++A+ V E MR + ++T ++ C+ G V A +F +
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 232 --PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
PNV+++TT+ISG G + +FR+M DG+
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 89/183 (48%), Gaps = 11/183 (6%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVL 191
DL CN +++ + + A+ +M E D+ ++ S+++ + + A+ ++
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 192 ESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSV 247
M G +PDVV T++D+ C+ G V+ A +F+Q+++ P+V+ +T+L++G +
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 248 GRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLK--IMPGEIF 305
GR + + R M + PD + ++ + G +E++ ++ I P
Sbjct: 226 GRWRDADSLLRGMTKRK-IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 306 YRS 308
Y S
Sbjct: 285 YTS 287
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 17/291 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHS----LF 58
L SL++ S +A L +++L + ++I+I+ S +S L
Sbjct: 139 LVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLL 198
Query: 59 RQLPQP----NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL 114
++P +V A+T+IL +SR G + I+ + M+ G SP + +L ++
Sbjct: 199 DKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM 258
Query: 115 AALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFS 170
D C++VL ++ G + A F E++ E +
Sbjct: 259 GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
+N+++ + G+ A+ VL+ M + C D VT N ++ AY R G EA+ V E +
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 231 D----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
PN I++TT+I Y G+ +L +F M G V P+ + VL
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV-PNTCTYNAVL 428
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 33/264 (12%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQL----PQPNVFAFTSILAFHSRHGLA-RQCIETYAEMR 93
T ++ Y+ A LF ++ P P + + IL + G + R+ + EMR
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 94 FKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVC---------NSVL 144
KG+ D + VL ACA+ L E +L+ C N++L
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFA----------ELKSCGYEPGTVTYNALL 323
Query: 145 DMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
++ K G A V EM E D ++N +++ YV G S+ A V+E M G
Sbjct: 324 QVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVM 383
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGI 256
P+ +T TV+DAY + G EA K+F +K+ PN ++ ++S R + +
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 257 FREMVNDGMVFPDAGALSGVLVSC 280
+M ++G P+ + +L C
Sbjct: 444 LCDMKSNG-CSPNRATWNTMLALC 466
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 17/239 (7%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPN----VFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
LI Y C A ++ ++ + V + ++L +R G R ++M+ KG
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 97 VSPDGYVFPKVLKACAQLAALL--EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
P + +L+ A+ L E LR ++L KC +
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLR---TLLLANFKCRALA 613
Query: 155 GAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
G+ R F ++ D+ +NSM+S + N + +A +LES+R DG PD+VT N++M
Sbjct: 614 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 211 DAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
D Y R G +A ++ + ++ P+++S+ T+I G+ G ++ + EM G+
Sbjct: 674 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 20/192 (10%)
Query: 54 AHSLFRQLP-QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLK--- 109
A +LF++ +P++ F S+L+ +R+ + Q +R G+SPD + ++
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677
Query: 110 ---ACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER 166
C + +L+ DL N+V+ + + G ++ A R+ EM ER
Sbjct: 678 RRGECWKAEEILKTLEKSQLKP-------DLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 167 DV----FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA 222
+ F++N+ +S Y G+ +V+E M + C P+ +T V+D YCR G SEA
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Query: 223 SKVFEQIK--DP 232
+IK DP
Sbjct: 791 MDFVSKIKTFDP 802
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 125/314 (39%), Gaps = 17/314 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
+++L AC+ L +AK+ + G L+Q++ A S+ +++ +
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+ + ++A + R G +++ M KGV P+ + V+ A + A +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGK-AGKED 403
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMM 175
+ N+VL + K ++ +M+ + +WN+M+
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----D 231
+ G+ + V M+ G EPD T NT++ AY R G +ASK++ ++ +
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
V ++ L++ + G + +M + G F +++ C G G
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKG--FKPTETSYSLMLQCYAKGGNYLG-- 579
Query: 292 IHGYGLKIMPGEIF 305
I +I G+IF
Sbjct: 580 IERIENRIKEGQIF 593
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 42/240 (17%)
Query: 40 KLIQIYADCDDLRSAHSLFRQLPQPNVFA----------------------FTSILAFHS 77
K+I I ++AH L +L Q + + F+ ++ +++
Sbjct: 85 KMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYA 144
Query: 78 RHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQL------AALLEXXXXXXXXXXXX 131
+ G+ I + ++R G+ P L+AC L L +
Sbjct: 145 KAGMINDSIVVFEQIRSCGLKPH-------LQACTVLLNSLVKQRLTDTVWKIFKKMVKL 197
Query: 132 XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRA 187
++ V N ++ SK GD E A ++ EM E+ D+F++N+++S Y + A
Sbjct: 198 GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEA 257
Query: 188 VEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD---PNVISWTTLISGY 244
+ V + M G P++VT N+ + + R G + EA+++F +IKD N +++TTLI GY
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGY 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 49/256 (19%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYAD----CDDLRSAHSLFR 59
N L+ ACS S +A++L M G F LI +Y + L + R
Sbjct: 207 NVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMER 266
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
PN+ + S + SR G R+ + E++ V+ + +
Sbjct: 267 SGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTY--------------- 310
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD----VFSWNSMM 175
+++D Y + D++ A R+ + M R V ++NS++
Sbjct: 311 ---------------------TTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSIL 349
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP--- 232
+G + A +L M EPD +T NT+++AYC++ + A KV +++ +
Sbjct: 350 RKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLK 409
Query: 233 -NVISWTTLISGYSSV 247
++ S+ LI G+ V
Sbjct: 410 LDMYSYKALIHGFCKV 425
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+P+V + +I+ + GL +E + M GV D + ++ +
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC-CSGRWSDAA 229
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCY 178
++ +V+D++ K G A ++++EM R DVF++NS+++
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP----NV 234
+G A ++L+ M GC PDVVT NT+++ +C+ V E +K+F ++ +
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREM 260
I++ T+I GY GR + IF M
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 119/272 (43%), Gaps = 10/272 (3%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NSL+ S + A +L M++ T +I ++ A L+ ++ +
Sbjct: 213 NSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
P+VF + S++ HG + + M KG PD + ++ + + ++
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK-SKRVD 331
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-DVFSWNSMMSCY 178
D N+++ Y + G + A +F M R ++ +++ ++
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGL 391
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNV 234
N ++A+ + E+M+ E D+ T N V+ C++G V +A +F + P+V
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+S+TT+ISG+ + S ++R+M DG++
Sbjct: 452 VSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVL 191
DL N V++ +C A V +M E DV + +S+++ + A++++
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 192 ESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV----ISWTTLISGYSSV 247
M G PDVV NT++D C++GLV++A ++F++++ V +++ +L++G
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 248 GRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
GR + + R+MV +V P+ + V+
Sbjct: 223 GRWSDAARLMRDMVMRDIV-PNVITFTAVI 251
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 10/213 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
QP+ FT+++ +H A + + M KG PD + V+ + +
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP-DLAL 235
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCY 178
D+ + N+++D K ++ A +F++M + DVF++N ++SC
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PN 233
G A +L M PD+V N ++DA+ + G + EA K+++++ P+
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
V+++ TLI G+ R + +FREM G+V
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 14/257 (5%)
Query: 17 NQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ-----PNVFAFTS 71
+ A +L ML + F LI + L A L+ ++ + P+V A+ +
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 72 ILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXX 131
++ ++ + +E + EM +G+ + + ++ Q A +
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ-ARDCDNAQMVFKQMVSD 420
Query: 132 XXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD----VFSWNSMMSCYVCNGLSQRA 187
D+ N +LD G+VE A VF+ M++RD + ++ +M+ G +
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 188 VEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISG 243
++ S+ + G +P+VVT T+M +CR GL EA +F ++K+ PN ++ TLI
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 244 YSSVGRHGVSLGIFREM 260
G S + +EM
Sbjct: 541 RLRDGDEAASAELIKEM 557
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 15/286 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+L+ L+ A +L M G + I Y D SA F ++
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
PN+ A + L ++ G R+ + + ++ G+ PD + ++K C ++
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK-CYSKVGEID 520
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD----VFSWNSMM 175
D+ V NS+++ K V+ A ++F M+E V ++N+++
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD---- 231
+ NG Q A+E+ E M GC P+ +T NT+ D C+ V+ A K+ ++ D
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
P+V ++ T+I G G+ ++ F +M +V+PD L +L
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQM--KKLVYPDFVTLCTLL 684
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 46/228 (20%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+P + + + ++ + G + +ET+ +M+ KG++P+
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN---------------------- 467
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE----RDVFSWNSMMSCY 178
+ CN+ L +K G A ++F +++ D ++N MM CY
Sbjct: 468 --------------IVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNV 234
G A+++L M +GCEPDV+ N++++ + V EA K+F ++K+ P V
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC 282
+++ TL++G G+ ++ +F MV G P L C C
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGC--PPNTITFNTLFDCLC 619
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 127/318 (39%), Gaps = 18/318 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP- 62
N L+ S+ +A +++ M+L G + L+ D+ S L +++
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 63 ---QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+PNV+ FT + R G + E M +G PD + ++ A A L+
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT-ARKLD 310
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMM 175
D ++LD +S D++ + + EM + DV ++ ++
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----D 231
G A + L+ MR G P++ T NT++ R+ + +A ++F ++
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
P ++ I Y G +L F +M G+ P+ A + L S G K+
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA-PNIVACNASLYSLAKAGRDREAKQ 489
Query: 292 IHGYGLK---IMPGEIFY 306
I YGLK ++P + Y
Sbjct: 490 IF-YGLKDIGLVPDSVTY 506
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 16/176 (9%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVL 191
D+ N +LD Y K G ++ ++ EM E + + N ++S V G A+++
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 192 ESMRVD-GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSS 246
+ D P T ++D + G + EA ++FE + D PN + LI+G+
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 247 VGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL-GALASG----KEIHGYGL 297
G + +F+ MV +G V PD S VLV C C+ G + G KE+ GL
Sbjct: 939 AGEADAACALFKRMVKEG-VRPDLKTYS-VLVDCLCMVGRVDEGLHYFKELKESGL 992
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 16/149 (10%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY--VCNGLS-----QRAV 188
DL+ + ++D G V+ F E++E + N + CY + NGL + A+
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL---NPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 189 EVLESMRVD-GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISG 243
+ M+ G PD+ T N+++ G+V EA K++ +I+ +PNV ++ LI G
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPDAGA 272
YS G+ + +++ MV G P+ G
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFS-PNTGT 1104
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ-- 63
L+ S S L +AKQL ML +G LI + + +A +LF+++ +
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 64 --PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P++ ++ ++ G + + + E++ G++PD + ++ + L E
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSC 177
DL NS++ G VE A ++++E++ E +VF++N+++
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVT 205
Y +G + A V ++M G P+ T
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 107/265 (40%), Gaps = 12/265 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
LI + D + A +F Q+ P+V + +L + + G + E Y EM
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
+ V+ + + + ++D SK G + A
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Query: 157 ARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
++F+ M + + +N +++ + G + A + + M +G PD+ T + ++D
Sbjct: 911 KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970
Query: 213 YCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
C +G V E F+++K+ P+V+ + +I+G R +L +F EM + P
Sbjct: 971 LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030
Query: 269 DAGALSGVLVSCRCLGALASGKEIH 293
D + ++++ G + +I+
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIY 1055
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 51/291 (17%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP- 62
N+L+ AC +S + +A ++ M +G ++ Y A S F +
Sbjct: 85 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 144
Query: 63 ---QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS--PDGYVFPKVLKACAQLAAL 117
+P+ F I+ S+ G + Q ++ + MR K PD F
Sbjct: 145 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF------------- 191
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM----RERDVFSWNS 173
S++ +YS G++E VF+ M + ++ S+N+
Sbjct: 192 -----------------------TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 228
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF----EQI 229
+M Y +G+S A+ VL ++ +G PDVV+ ++++Y R +A +VF ++
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 288
Query: 230 KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+ PNV+++ LI Y S G ++ IFR+M DG + P+ ++ +L +C
Sbjct: 289 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-IKPNVVSVCTLLAAC 338
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
+I+++A + + A LF ++ + P+ + +++ H R G R + +M
Sbjct: 17 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 76
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
++P + ++ AC E DL N VL Y A
Sbjct: 77 IAPSRSTYNNLINACGSSGNWRE-ALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA 135
Query: 157 ARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD--GCEPDVVTRNTVM 210
F+ M+ D ++N ++ C G S +A+++ SMR C PDVVT ++M
Sbjct: 136 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 195
Query: 211 DAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
Y G + VFE + PN++S+ L+ Y+ G G +L + ++ +G++
Sbjct: 196 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 255
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGE 303
PD +VS CL ++ YG PG+
Sbjct: 256 -PD-------VVSYTCL--------LNSYGRSRQPGK 276
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 53/252 (21%)
Query: 11 SASKSLNQ-AKQLHHYMLLHGSHRKPFFTTKLIQIY--------ADCDDLRSAHSLFRQL 61
SA KS Q +K L ++ L+ G+ +P TT I IY + DL ++ R
Sbjct: 124 SAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE 183
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+P+V FTSI+ +S G C + M +G+ P+ +
Sbjct: 184 CRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY----------------- 226
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSC 177
N+++ Y+ G A V ++++ DV S+ +++
Sbjct: 227 -------------------NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 267
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PN 233
Y + +A EV MR + +P+VVT N ++DAY G ++EA ++F Q++ PN
Sbjct: 268 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 327
Query: 234 VISWTTLISGYS 245
V+S TL++ S
Sbjct: 328 VVSVCTLLAACS 339
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 105/266 (39%), Gaps = 51/266 (19%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTT--KLIQIYADCDDLRSAHSLFRQLPQ 63
LL + S+ +AK++ ++++ RKP T LI Y L A +FRQ+ Q
Sbjct: 264 LLNSYGRSRQPGKAKEV--FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 64 ----PNVFAFTSILAFHSR----------------HGLA-------------------RQ 84
PNV + ++LA SR G+ +
Sbjct: 322 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 381
Query: 85 CIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVL 144
I Y MR K V D F ++ +++ E V +SVL
Sbjct: 382 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK-EVYSSVL 440
Query: 145 DMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
YSK G V A +F++M+ E DV ++ SM+ Y + +A E+ M +G E
Sbjct: 441 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 500
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVF 226
PD + + +M A+ + G + S VF
Sbjct: 501 PDSIACSALMRAFNKGG---QPSNVF 523
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 126/280 (45%), Gaps = 16/280 (5%)
Query: 41 LIQIYADCDDLRSAHSLFRQLP----QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
LI Y+ + A L +P P V+ + +++ +HG + E +AEM G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
+SPD + +L + ++E DL +S++ ++++ G+++ A
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP-DLVCFSSMMSLFTRSGNLDKA 394
Query: 157 ARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
F+ ++E D + ++ Y G+ A+ + M GC DVVT NT++
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 213 YCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
C+ ++ EA K+F ++ + P+ + T LI G+ +G ++ +F++M + +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRL 513
Query: 269 DAGALSGVLVSCRCLGALASGKEIHG--YGLKIMPGEIFY 306
D + +L +G + + KEI +I+P I Y
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 119/280 (42%), Gaps = 16/280 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N++L K L +A +L + M + T LI + +L++A LF+++ +
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 64 P----NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+V + ++L + G E +A+M K + P + ++ A L E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMM 175
+ +CNS++ Y + G+ ++M D S+N+++
Sbjct: 569 AFRVWDEMISKNIKPT-VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 176 SCYVCNGLSQRAVEVLESMRVD--GCEPDVVTRNTVMDAYCRMGLVSEAS----KVFEQI 229
+V +A +++ M + G PDV T N+++ +CR + EA K+ E+
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 230 KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
+P+ ++T +I+G+ S + I EM+ G PD
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS-PD 726
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 15/260 (5%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQP----NVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
LI+ Y LR AH F L ++ A +++ R G Y E+ G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
V + Y ++ A + +E D+ N+++ YS G +E A
Sbjct: 231 VGINVYTLNIMVNALCK-DGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 157 ARVFDEMRERD----VFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
+ + M + V+++N++++ +G +RA EV M G PD T +++
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 213 YCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
C+ G V E KVF ++ P+++ +++++S ++ G +L F + G++ P
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI-P 408
Query: 269 DAGALSGVLVSCRCLGALAS 288
D + +L+ C + S
Sbjct: 409 D-NVIYTILIQGYCRKGMIS 427
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 149/350 (42%), Gaps = 57/350 (16%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N LL++C + + L+ M+L G + + LI+ D + +A LF ++P+
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE 175
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVF--------------- 104
PN F F ++ + + GL + +E M GV P+ ++
Sbjct: 176 KGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDD 235
Query: 105 --------------PKVLKACAQLAALLEXXXXXXXXXXXXXXXXD----LRVCNSV--- 143
P ++ ++++AL + D L NS+
Sbjct: 236 SEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYN 295
Query: 144 --LDMYSKCGDVEGAARVFDEMRERD----VFSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
L + K G +E A +F+ +RE D + S+N + V +G A VL+ M
Sbjct: 296 LMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDK 355
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVS 253
G P + + N +MD C++G++S+A + +K P+ +++ L+ GY SVG+ +
Sbjct: 356 GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAA 415
Query: 254 LGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI------HGYGL 297
+ +EM+ + P+A + +L S +G ++ +E+ GYGL
Sbjct: 416 KSLLQEMMRNN-CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 112/253 (44%), Gaps = 21/253 (8%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKL--IQIYADCDDLRSAHSLFR----QLPQ--PNVF 67
+++ Q H ++L S +K ++ L + I+A + + A F+ + P+ P+V+
Sbjct: 54 MHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVY 113
Query: 68 AFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
+ +L + Y +M G++P Y F +++A ++ ++
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD-SSCVDAARELFDE 172
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS----WNSMMSCYVCNGL 183
+ ++ Y K G + + + M V +N+++S + G
Sbjct: 173 MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGR 232
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK--------DPNVI 235
+ + +++E MR +G PD+VT N+ + A C+ G V +AS++F ++ PN I
Sbjct: 233 NDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSI 292
Query: 236 SWTTLISGYSSVG 248
++ ++ G+ VG
Sbjct: 293 TYNLMLKGFCKVG 305
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/247 (17%), Positives = 97/247 (39%), Gaps = 36/247 (14%)
Query: 53 SAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVL 108
A ++ +Q+ P+++++ ++ + G+ M+ GV PD + +L
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 109 KACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-- 166
+ + + + CN +L K G + A + +M E+
Sbjct: 404 HGYCSVGKV-DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 167 --DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG-----------------------CEP 201
D + N ++ +G +A+E+++ MRV G C P
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522
Query: 202 DVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIF 257
D++T +T+++ C+ G +EA +F ++ P+ +++ I + G+ + +
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 258 REMVNDG 264
++M G
Sbjct: 583 KDMEKKG 589
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 51/291 (17%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP- 62
N+L+ AC +S + +A ++ M +G ++ Y A S F +
Sbjct: 217 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276
Query: 63 ---QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVS--PDGYVFPKVLKACAQLAAL 117
+P+ F I+ S+ G + Q ++ + MR K PD F
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF------------- 323
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM----RERDVFSWNS 173
S++ +YS G++E VF+ M + ++ S+N+
Sbjct: 324 -----------------------TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 360
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF----EQI 229
+M Y +G+S A+ VL ++ +G PDVV+ ++++Y R +A +VF ++
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 420
Query: 230 KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+ PNV+++ LI Y S G ++ IFR+M DG + P+ ++ +L +C
Sbjct: 421 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-IKPNVVSVCTLLAAC 470
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
+I+++A + + A LF ++ + P+ + +++ H R G R + +M
Sbjct: 149 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 208
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
++P + ++ AC E DL N VL Y A
Sbjct: 209 IAPSRSTYNNLINACGSSGNWRE-ALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA 267
Query: 157 ARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD--GCEPDVVTRNTVM 210
F+ M+ D ++N ++ C G S +A+++ SMR C PDVVT ++M
Sbjct: 268 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 327
Query: 211 DAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
Y G + VFE + PN++S+ L+ Y+ G G +L + ++ +G++
Sbjct: 328 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 387
Query: 267 FPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGE 303
PD +VS CL ++ YG PG+
Sbjct: 388 -PD-------VVSYTCL--------LNSYGRSRQPGK 408
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 53/252 (21%)
Query: 11 SASKSLNQ-AKQLHHYMLLHGSHRKPFFTTKLIQIY--------ADCDDLRSAHSLFRQL 61
SA KS Q +K L ++ L+ G+ +P TT I IY + DL ++ R
Sbjct: 256 SAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE 315
Query: 62 PQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
+P+V FTSI+ +S G C + M +G+ P+ +
Sbjct: 316 CRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY----------------- 358
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSC 177
N+++ Y+ G A V ++++ DV S+ +++
Sbjct: 359 -------------------NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 399
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PN 233
Y + +A EV MR + +P+VVT N ++DAY G ++EA ++F Q++ PN
Sbjct: 400 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 234 VISWTTLISGYS 245
V+S TL++ S
Sbjct: 460 VVSVCTLLAACS 471
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 105/266 (39%), Gaps = 51/266 (19%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTT--KLIQIYADCDDLRSAHSLFRQLPQ 63
LL + S+ +AK++ ++++ RKP T LI Y L A +FRQ+ Q
Sbjct: 396 LLNSYGRSRQPGKAKEV--FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 64 ----PNVFAFTSILAFHSR----------------HGLA-------------------RQ 84
PNV + ++LA SR G+ +
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 513
Query: 85 CIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVL 144
I Y MR K V D F ++ +++ E V +SVL
Sbjct: 514 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK-EVYSSVL 572
Query: 145 DMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
YSK G V A +F++M+ E DV ++ SM+ Y + +A E+ M +G E
Sbjct: 573 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 632
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVF 226
PD + + +M A+ + G + S VF
Sbjct: 633 PDSIACSALMRAFNKGG---QPSNVF 655
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 39/281 (13%)
Query: 13 SKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSI 72
S S+ Q+H ++ G+ + +L++ + D S++R + + ++ +
Sbjct: 32 SNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANPV 89
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
+ +Q + Y ++ G PD Y F ++ +C + ++
Sbjct: 90 FKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLI-SCIEKTCCVDSGKMCHGQAIKHG 148
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
L V NS++ MY+ CG ++ A ++F E+ +RD+ SWNS+++ V NG
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNG---------- 198
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGV 252
DV+ A K+F+++ D N+ISW +IS Y GV
Sbjct: 199 ---------DVLA----------------AHKLFDEMPDKNIISWNIMISAYLGANNPGV 233
Query: 253 SLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
S+ +FREMV G + L +L +C L G+ +H
Sbjct: 234 SISLFREMVRAGFQ-GNESTLVLLLNACGRSARLKEGRSVH 273
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 11/294 (3%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NSL+ + +L+ AK+L + R +I D+ +AH LF ++P
Sbjct: 157 NSLMHMYTCCGALDLAKKL----FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPD 212
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
N+ ++ +++ + I + EM G + +L AC + +A L+
Sbjct: 213 KNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR-SARLKEGRS 271
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGL 183
+ + +++DMY KC +V A R+FD + R+ +WN M+ + +G
Sbjct: 272 VHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGR 331
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWT 238
+ +E+ E+M PD VT V+ R GLVS+ + + D PN
Sbjct: 332 PEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQW 391
Query: 239 TLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ + YSS G + + + ++ V P++ + +L S R G G+ I
Sbjct: 392 CMANLYSSAGFPEEAEEALKNLPDED-VTPESTKWANLLSSSRFTGNPTLGESI 444
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 88/233 (37%), Gaps = 5/233 (2%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
LL AC S L + + +H ++ + T LI +Y C ++ A +F L N
Sbjct: 256 LLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRN 315
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ H HG +E + M + PD F VL CA+ + +
Sbjct: 316 KVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYS 375
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV----FSWNSMMSCYVCN 181
+ + ++YS G E A + + DV W +++S
Sbjct: 376 LMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFT 435
Query: 182 GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV 234
G + +S+ ++ + + +M+ Y G + ++V E +K+ +
Sbjct: 436 GNPTLGESIAKSL-IETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKI 487
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 130/303 (42%), Gaps = 16/303 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
N+L++ +++A L M+ +G ++ D A L R++
Sbjct: 161 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 63 QPNV----FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
+ NV F +++I+ R G I + EM KG+ + +++ + A
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK-AGKW 279
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSM 174
++ N +LD++ K G ++ A ++ EM R ++ ++N++
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD--- 231
M Y A +L+ M + C PD+VT +++ YC + V + KVF I
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 232 -PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC-LGALASG 289
N ++++ L+ G+ G+ ++ +F+EMV+ G V PD G+L+ C G L
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG-VLPDVMTY-GILLDGLCDNGKLEKA 457
Query: 290 KEI 292
EI
Sbjct: 458 LEI 460
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA-CAQLAALLEXXX 122
PNV F +L + G ++ E Y EM +G+SP+ + ++ C Q L
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ--NRLSEAN 353
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCY 178
D+ S++ Y V+ +VF + +R + +++ ++ +
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNV 234
+G + A E+ + M G PDV+T ++D C G + +A ++FE ++ D +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 235 ISWTTLISGYSSVGRHGVSLGIF 257
+ +TT+I G G+ + +F
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLF 496
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 165 ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASK 224
E D ++N+++ G AV +++ M +GC+PDVVT N++++ CR G S A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 225 VFEQIKDPN----VISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+ ++++ N V +++T+I G ++ +F+EM G+
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 15/230 (6%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+P++F + +I+ + G+ + E + KG PD + +L+A E
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKC--GDVEGAARVFDEMRER----DVFSWNSMMS 176
D V + + + C G +E A + M+E+ D +S++ +++
Sbjct: 320 LMTKMFSEKC---DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----P 232
+ G A+E LE+M DGC PD+V NTV+ C+ G +A ++F ++ + P
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 233 NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC 282
N S+ T+ S S G +L + EM+++G + PD + ++SC C
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNG-IDPDEITYNS-MISCLC 484
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 9/216 (4%)
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAA 116
+F + PNV ++ ++ R G + + M+ KG++PD Y + ++ A +
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR-EG 382
Query: 117 LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE----RDVFSWN 172
L+ D+ N+VL K G + A +F ++ E + S+N
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 173 SMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD- 231
+M S +G RA+ ++ M +G +PD +T N+++ CR G+V EA ++ ++
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Query: 232 ---PNVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
P+V+++ ++ G+ R ++ + MV +G
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 136 DLRVCNSVLDMYSKCGDVEGAARV---FDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
D+ +C ++ + ++ A RV ++ + DVF++N++++ + A VL+
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLD 182
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVG 248
MR PD VT N ++ + C G + A KV Q+ P VI++T LI G
Sbjct: 183 RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242
Query: 249 RHGVSLGIFREMVNDGMVFPD 269
+L + EM++ G+ PD
Sbjct: 243 GVDEALKLMDEMLSRGLK-PD 262
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
QP+ FT+++ +H A + + M KG PD + V+ + +
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP-DLAL 225
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCY 178
D+ + ++V+D K V+ A +F EM + DVF+++S++SC
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI----KDPNV 234
G A +L M P+VVT N+++DA+ + G + EA K+F+++ DPN+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVN 262
+++ +LI+G+ R + IF MV+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 116/270 (42%), Gaps = 13/270 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
NSL+ A + L +A++L M+ LI + D L A +F +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 63 Q----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
P+V + +++ + +E + +M +G+ + + ++ Q A+
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ-ASDC 431
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSM 174
+ ++ N++LD K G +E A VF+ ++ E D++++N M
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD--- 231
G + ++ S+ + G +PDV+ NT++ +C+ GL EA +F ++K+
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 232 -PNVISWTTLISGYSSVGRHGVSLGIFREM 260
P+ ++ TLI + G S + +EM
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 107/249 (42%), Gaps = 14/249 (5%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
LI +A L A LF ++ Q PN+ + S++ H + + + M K
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
PD + ++ + +++ + +++ + + D + A
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY-TTLIHGFFQASDCDNA 434
Query: 157 ARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
VF +M ++ ++N+++ NG ++A+ V E ++ EPD+ T N + +
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 213 YCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFP 268
C+ G V + +F + P+VI++ T+ISG+ G + +F +M DG P
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG-PLP 553
Query: 269 DAGALSGVL 277
D+G + ++
Sbjct: 554 DSGTYNTLI 562
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 99/240 (41%), Gaps = 19/240 (7%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NSL+ L++A+Q+ M+ LI + + LFR + +
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL-- 117
N +T+++ HG + A+M FK + DG V P ++ L L
Sbjct: 409 RGLVGNTVTYTTLI-----HGFFQASDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGLCK 462
Query: 118 ---LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFS 170
LE D+ N + + K G VE +F + + DV +
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 171 WNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK 230
+N+M+S + GL + A + M+ DG PD T NT++ A+ R G + ++++ ++++
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 35/258 (13%)
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSP---------DGYV---- 103
+ R+ QPNVF F ++ + G + + +M+ G SP DGY
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 104 FPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM 163
K+ KA A L ++E +L N ++D + K ++ G+ +VF EM
Sbjct: 274 NGKMYKADAVLKEMVE-----------NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322
Query: 164 RERD----VFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLV 219
++D V S+NS+++ G A+ + + M G +P+++T N +++ +C+ ++
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 220 SEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSG 275
EA +F +K P + LI Y +G+ + EM +G+V PD G +
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV-PDVGTYNC 441
Query: 276 VLVS-CRCLGALASGKEI 292
++ CR G + + K++
Sbjct: 442 LIAGLCRN-GNIEAAKKL 458
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 103/212 (48%), Gaps = 9/212 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
QPN+ + +++ ++ + ++ ++ + ++ +G P ++ ++ A +L + +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI-DDGF 421
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER---DVFSWNSMMSCYV 179
D+ N ++ + G++E A ++FD++ + D+ +++ +M Y
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYC 481
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP-----NV 234
G S++A +L+ M G +P +T N VM YC+ G + A+ + Q++ NV
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
S+ L+ GYS G+ + + EM+ G+V
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 72/126 (57%), Gaps = 14/126 (11%)
Query: 148 SKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDV 203
++ DVE V+ EM R +VF++N +++ G +A +V+E M+V GC P+V
Sbjct: 202 NRSADVE---YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNV 258
Query: 204 VTRNTVMDAYCRM---GLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGI 256
V+ NT++D YC++ G + +A V +++ + PN+ ++ LI G+ S+ +
Sbjct: 259 VSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKV 318
Query: 257 FREMVN 262
F+EM++
Sbjct: 319 FKEMLD 324
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 95/240 (39%), Gaps = 41/240 (17%)
Query: 35 PFFTT--KLIQIYADCDDLRSAHSLFRQL----PQPNVFAFTSILAFHSRHGLARQCIET 88
P TT LI + D+L + +F+++ +PNV ++ S++ G + I
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 89 YAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYS 148
+M GV P+ + ++ + L E LDM+
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKE-----------------------ALDMF- 389
Query: 149 KCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNT 208
G V+G V +N ++ Y G + E M +G PDV T N
Sbjct: 390 --GSVKGQGAV------PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 209 VMDAYCRMGLVSEASKVFEQIKD---PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
++ CR G + A K+F+Q+ P+++++ L+ GY G + + +EM G+
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 91/165 (55%), Gaps = 10/165 (6%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRE----RDVFSWNSMMSCYVCNGLSQRAVEVLESM 194
V NS+L+ K VE A ++FDE D ++N ++ G +++A+E+L M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 195 RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGR 249
GCEPD+VT NT++ +C+ +++AS++F+ +K P+V+++T++ISGY G+
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 250 HGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
+ + +M+ G ++P + ++ G + + +EI G
Sbjct: 293 MREASSLLDDMLRLG-IYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 134/314 (42%), Gaps = 33/314 (10%)
Query: 7 LQACSASKSLN-----------QAKQLHHYMLLHGSHRKPFFTT--KLIQIYADCDDLRS 53
Q+C+ +K+ N K L ++ G +P T LIQ + ++L
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 54 AHSLFRQLPQ-----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVL 108
A +F+ + P+V +TS+++ + + G R+ +M G+ P F ++
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 109 KACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV 168
A+ +L D+ S++D Y + G V R+++EM R +
Sbjct: 320 DGYAKAGEML-TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 169 FSWNSMMSCYVCNGLSQ-----RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEAS 223
F N+ + N L +A E+L + P N V+D +C+ G V+EA+
Sbjct: 379 FP-NAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 224 KVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
+ E+++ P+ I++T LI G+ GR ++ IF +MV G PD +S +L
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS-PDKITVSSLL-- 494
Query: 280 CRCLGALASGKEIH 293
CL KE +
Sbjct: 495 -SCLLKAGMAKEAY 507
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 91/165 (55%), Gaps = 10/165 (6%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRE----RDVFSWNSMMSCYVCNGLSQRAVEVLESM 194
V NS+L+ K VE A ++FDE D ++N ++ G +++A+E+L M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 195 RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK-----DPNVISWTTLISGYSSVGR 249
GCEPD+VT NT++ +C+ +++AS++F+ +K P+V+++T++ISGY G+
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 250 HGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
+ + +M+ G ++P + ++ G + + +EI G
Sbjct: 293 MREASSLLDDMLRLG-IYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 134/314 (42%), Gaps = 33/314 (10%)
Query: 7 LQACSASKSLN-----------QAKQLHHYMLLHGSHRKPFFTT--KLIQIYADCDDLRS 53
Q+C+ +K+ N K L ++ G +P T LIQ + ++L
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 54 AHSLFRQLPQ-----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVL 108
A +F+ + P+V +TS+++ + + G R+ +M G+ P F ++
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 109 KACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV 168
A+ +L D+ S++D Y + G V R+++EM R +
Sbjct: 320 DGYAKAGEML-TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 169 FSWNSMMSCYVCNGLSQ-----RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEAS 223
F N+ + N L +A E+L + P N V+D +C+ G V+EA+
Sbjct: 379 FP-NAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN 437
Query: 224 KVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
+ E+++ P+ I++T LI G+ GR ++ IF +MV G PD +S +L
Sbjct: 438 VIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS-PDKITVSSLL-- 494
Query: 280 CRCLGALASGKEIH 293
CL KE +
Sbjct: 495 -SCLLKAGMAKEAY 507
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 112/241 (46%), Gaps = 15/241 (6%)
Query: 54 AHSLFRQLPQPNVFA----FTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLK 109
A LFR++ + N+ A ++ ++ + G + + EM KG+ D + ++
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 110 ACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER--- 166
+ D+ ++++D++ K G + A +++EM R
Sbjct: 289 GLCN-DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 167 -DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKV 225
D ++NS++ + A ++ + M GCEPD+VT + ++++YC+ V + ++
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 226 FEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCR 281
F +I PN I++ TL+ G+ G+ + +F+EMV+ G+ P + G+L+
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV--PPSVVTYGILLDGL 465
Query: 282 C 282
C
Sbjct: 466 C 466
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 9/193 (4%)
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
P+V F++++ + G + E Y EM +G++PD + ++ + L E
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYV 179
D+ + +++ Y K V+ R+F E+ + + ++N+++ +
Sbjct: 373 FDLMVSKGCEP-DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
+G A E+ + M G P VVT ++D C G +++A ++FE+++ S T
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK----SRMT 487
Query: 240 LISGYSSVGRHGV 252
L G ++ HG+
Sbjct: 488 LGIGIYNIIIHGM 500
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 165 ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA-- 222
E D+++ M++CY A VL G EPD +T +T+++ +C G VSEA
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 161
Query: 223 --SKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
++ E + P++++ +TLI+G GR +L + MV G PD VL
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ-PDEVTYGPVL 217
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 122/279 (43%), Gaps = 14/279 (5%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
N+L+ +L++ +L H M + F + LI + + AH LF ++
Sbjct: 278 FNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC 337
Query: 63 Q----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
+ PN FT+++ HSR+G E+Y +M KG+ PD ++ ++ + L+
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
D +++D + + GDVE A + EM + + S
Sbjct: 398 -AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 179 VC----NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD--- 231
VC G A L M G +PD VT +MDA+C+ G K+ ++++
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 232 -PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
P+V+++ L++G +G+ + + M+N G+V PD
Sbjct: 517 VPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV-PD 554
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 14/253 (5%)
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV+ F ++ + G + + E+ + + P F ++ ++ L E
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS----WNSMMSCYVC 180
D+ +++++ K ++GA +FDEM +R + + +++ +
Sbjct: 299 HQMEKSRTRP-DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMG-LVSEASKVFEQIKD---PNVIS 236
NG E + M G +PD+V NT+++ +C+ G LV+ + V I+ P+ I+
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC---RCLGALASGKEIH 293
+TTLI G+ G +L I +EM +G+ G + V C R + A + +E+
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 294 GYGLKIMPGEIFY 306
G+K P ++ Y
Sbjct: 478 RAGIK--PDDVTY 488
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 137 LRVCNSVLDMYSK---CGDVEG-AARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLE 192
+R C ++LD K G + G + D +V+ +N +M+ + G A +V +
Sbjct: 205 IRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFD 264
Query: 193 SMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVG 248
+ +P VV+ NT+++ YC++G + E ++ Q++ P+V +++ LI+
Sbjct: 265 EITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKEN 324
Query: 249 RHGVSLGIFREMVNDGMVFPDA 270
+ + G+F EM G++ D
Sbjct: 325 KMDGAHGLFDEMCKRGLIPNDV 346
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 127/317 (40%), Gaps = 45/317 (14%)
Query: 28 LHGSHRKPFFTTK--LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQC 85
++G RK + + LI Y DL +A +F ++P + + +++A + +
Sbjct: 16 VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG 75
Query: 86 IETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLD 145
+ + EM G SPD Y V A L + + DL V +S+
Sbjct: 76 LSLFREMHGLGFSPDEYTLGSVFSGSAGLRS-VSIGQQIHGYTIKYGLELDLVVNSSLAH 134
Query: 146 MYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT 205
MY + G ++ V M R++ +WN+++ NG + + + + M++ GC P+ +T
Sbjct: 135 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 194
Query: 206 RNTVMDA-----------------------------------YCRMGLVSEASKVFEQIK 230
TV+ + Y + G + +A+K F + +
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 254
Query: 231 DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
D + + W+++IS Y G+ ++ +F M + + A +L +C G G
Sbjct: 255 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 314
Query: 291 E-----IHGYGLKIMPG 302
E + YG K PG
Sbjct: 315 ELFDMMVEKYGFK--PG 329
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L S+ + +S++ +Q+H Y + +G + L +Y L+ + R +P
Sbjct: 94 LGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMP 153
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
N+ A+ +++ ++++G + Y M+ G P+ F VL +C+ LA +
Sbjct: 154 VRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA-IRGQGQ 212
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNG 182
+ V +S++ MYSKCG + AA+ F E + D W+SM+S Y +G
Sbjct: 213 QIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHG 272
Query: 183 LSQRAVEVLESM 194
A+E+ +M
Sbjct: 273 QGDEAIELFNTM 284
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 38/156 (24%)
Query: 144 LDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDV 203
+ MYSK GD A V+ MR+++ S
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMS--------------------------------- 27
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
N +++ Y R G + A KVF+++ D + +W +I+G + L +FREM
Sbjct: 28 --SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM--H 83
Query: 264 GMVF-PDAGALSGVLVSCRCLGALASGKEIHGYGLK 298
G+ F PD L V L +++ G++IHGY +K
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 112/241 (46%), Gaps = 10/241 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+ +V F +I+ ++ + + EM KG+ P+ + ++ +C
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI-SCLCSYGRWSDAS 315
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCY 178
+L N+++D + K G A +++D+M +R D+F++NS+++ +
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNV 234
+ +A ++ E M C PDVVT NT++ +C+ V + +++F ++ +
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
+++TTLI G G + +F++MV+DG V PD S +L G L E+
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Query: 295 Y 295
Y
Sbjct: 495 Y 495
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 109/270 (40%), Gaps = 13/270 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
N+L+ A +A++L+ M+ F L+ + D L A +F +
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 63 Q----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
P+V + +++ + E + EM +G+ D + +++
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC- 451
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSM 174
+ D+ + +LD G +E A VFD M++ D++ + +M
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD--- 231
+ G ++ S+ + G +P+VVT NT++ C L+ EA + +++K+
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 232 -PNVISWTTLISGYSSVGRHGVSLGIFREM 260
PN ++ TLI + G S + REM
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
PN+ F +++ + G + + Y +M + + PD + + ++ + L+
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC-MHDRLDKAK 385
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCY 178
D+ N+++ + K VE +F EM R D ++ +++
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP----NV 234
+G A +V + M DG PD++T + ++D C G + +A +VF+ ++ ++
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 235 ISWTTLISGYSSVGR 249
+TT+I G G+
Sbjct: 506 YIYTTMIEGMCKAGK 520
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 46 ADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVF 104
ADCD S R + P F ++ + G+ + I+ +++M RF+ VF
Sbjct: 173 ADCDVFDVLWST-RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFR-------VF 224
Query: 105 PKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM- 163
PK R CN +L ++K G + R F +M
Sbjct: 225 PKT------------------------------RSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 164 ---RERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVS 220
VF++N M+ C G + A + E M+ G PD VT N+++D + ++G +
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 221 EASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+ FE++KD P+VI++ LI+ + G+ + L +REM +G+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 95/211 (45%), Gaps = 44/211 (20%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+P VF + ++ + G + EM+F+G+ PD +
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY------------------ 300
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCY 178
NS++D + K G ++ F+EM+ E DV ++N++++C+
Sbjct: 301 ------------------NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNV 234
G +E M+ +G +P+VV+ +T++DA+C+ G++ +A K + ++ PN
Sbjct: 343 CKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 402
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
++T+LI +G + + EM+ G+
Sbjct: 403 YTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+PNV ++++++ + G+ +Q I+ Y +MR G+ P+ Y + ++ A ++ L +
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD-AF 422
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF----SWNSMMSCY 178
++ +++D ++ A +F +M V S+N+++ +
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNV 234
V RA+E+L ++ G +PD++ T + C + + A V ++K+ N
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREM 260
+ +TTL+ Y G L + EM
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 122/312 (39%), Gaps = 54/312 (17%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ- 63
SL+ A +L+ A +L + ML G T LI D + ++ A LF ++
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 64 ---PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
PN+ ++ +++ + + +E E++ +G+ PD ++ + L
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK---- 522
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE----RDVFSWNSMMS 176
+E A V +EM+E + + ++M
Sbjct: 523 --------------------------------IEAAKVVMNEMKECGIKANSLIYTTLMD 550
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----- 231
Y +G + +L+ M+ E VVT ++D C+ LVS+A F +I +
Sbjct: 551 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGA----LSGVLVSCRCLGALA 287
N +T +I G + + +F +MV G+V PD A + G L ALA
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV-PDRTAYTSLMDGNFKQGNVLEALA 669
Query: 288 SGKEIHGYGLKI 299
++ G+K+
Sbjct: 670 LRDKMAEIGMKL 681
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 19/267 (7%)
Query: 41 LIQIYADCDDLRSAHSLF-----RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK 95
+I +Y + A +F + +PQ V + S+++F + + ++ + Y +M+
Sbjct: 260 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTV-TYNSLMSFETSY---KEVSKIYDQMQRS 315
Query: 96 GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEG 155
+ PD + ++KA + A E + N +LD ++ G VE
Sbjct: 316 DIQPDVVSYALLIKAYGR-ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 374
Query: 156 AARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
A VF MR D++S+ +M+S YV + A + + ++VDG EP++VT T++
Sbjct: 375 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 434
Query: 212 AYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
Y + V + +V+E+++ N TT++ G +LG ++EM + G V
Sbjct: 435 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG-VP 493
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHG 294
PD A + +L L KE+ G
Sbjct: 494 PDQKAKNVLLSLASTQDELEEAKELTG 520
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 18/251 (7%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
LI Y + A + L + PNV ++T+++ + R G + M+ G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXX--XXDLRVCNSVLDMYSKCGDVE 154
P + +LK + E D ++ + ++ MY K G+ E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 155 GAARVFDEMRERDV----FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
A +VF M + V ++NS+MS + ++ + M+ +PDVV+ ++
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLI 328
Query: 211 DAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
AY R EA VFE++ D P ++ L+ ++ G + +F+ M D +
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RI 387
Query: 267 FPDAGALSGVL 277
FPD + + +L
Sbjct: 388 FPDLWSYTTML 398
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 19/267 (7%)
Query: 41 LIQIYADCDDLRSAHSLF-----RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFK 95
+I +Y + A +F + +PQ V + S+++F + + ++ + Y +M+
Sbjct: 253 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTV-TYNSLMSFETSY---KEVSKIYDQMQRS 308
Query: 96 GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEG 155
+ PD + ++KA + A E + N +LD ++ G VE
Sbjct: 309 DIQPDVVSYALLIKAYGR-ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQ 367
Query: 156 AARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
A VF MR D++S+ +M+S YV + A + + ++VDG EP++VT T++
Sbjct: 368 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 427
Query: 212 AYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
Y + V + +V+E+++ N TT++ G +LG ++EM + G V
Sbjct: 428 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG-VP 486
Query: 268 PDAGALSGVLVSCRCLGALASGKEIHG 294
PD A + +L L KE+ G
Sbjct: 487 PDQKAKNVLLSLASTQDELEEAKELTG 513
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 18/251 (7%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
LI Y + A + L + PNV ++T+++ + R G + M+ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXX--XXDLRVCNSVLDMYSKCGDVE 154
P + +LK + E D ++ + ++ MY K G+ E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 155 GAARVFDEMRERDV----FSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
A +VF M + V ++NS+MS + ++ + M+ +PDVV+ ++
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLI 321
Query: 211 DAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
AY R EA VFE++ D P ++ L+ ++ G + +F+ M D +
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RI 380
Query: 267 FPDAGALSGVL 277
FPD + + +L
Sbjct: 381 FPDLWSYTTML 391
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 127/293 (43%), Gaps = 15/293 (5%)
Query: 16 LNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTS 71
L++ ++ M G R F T LI Y ++ L ++ P++ + +
Sbjct: 157 LDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNT 216
Query: 72 ILAFHSRHGLARQ-CIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
++ +R GL + + +AEMR +G+ PD + +L ACA + L +
Sbjct: 217 VINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA-IRGLGDEAEMVFRTMND 275
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE----RDVFSWNSMMSCYVCNGLSQR 186
DL + +++ + K +E + EM D+ S+N ++ Y +G +
Sbjct: 276 GGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKE 335
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLIS 242
A+ V M+ GC P+ T + +++ + + G + ++F ++K DP+ ++ LI
Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Query: 243 GYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGY 295
+ G + +F +MV + + PD G++ +C G ++I Y
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEEN-IEPDMETYEGIIFACGKGGLHEDARKILQY 447
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 11/224 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+PN +T +++ R GL +C+E + EM +GVS + + ++ A + E
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGR-NGRYETSL 196
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCG-DVEGAARVFDEMR----ERDVFSWNSMMSC 177
+ N+V++ ++ G D EG +F EMR + D+ ++N+++S
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PN 233
GL A V +M G PD+ T + +++ + ++ + + + ++ P+
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
+ S+ L+ Y+ G ++G+F +M G P+A S +L
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT-PNANTYSVLL 359
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 143 VLDMYSKCGDVEGAARVFDEMRE----RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDG 198
++ + + G ++ VFDEM R VFS+ ++++ Y NG + ++E+L+ M+ +
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 199 CEPDVVTRNTVMDAYCRMGLVSEA-SKVFEQIK----DPNVISWTTLISGYSSVGRHGVS 253
P ++T NTV++A R GL E +F +++ P+++++ TL+S + G +
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 254 LGIFREMVNDGMVFPDA----------GALSGVLVSCRCLGALASG 289
+FR M NDG + PD G L + C LG +ASG
Sbjct: 267 EMVFRTM-NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASG 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 110/274 (40%), Gaps = 21/274 (7%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTK--LIQIYADCDDLRSAHSLFRQLPQ 63
LL S + +QL ++ + S+ P T LI+++ + + +LF + +
Sbjct: 358 LLNLFGQSGRYDDVRQL--FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
P++ + I+ + GL + M + P + V++A Q AAL E
Sbjct: 416 ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ-AALYE 474
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM------RERDVFSWNS 173
+ +S+L +++ G V+ + + + R RD F N+
Sbjct: 475 EALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF--NA 532
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-- 231
+ Y G + AV+ M C+PD T V+ Y LV E + FE++K
Sbjct: 533 QIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASD 592
Query: 232 --PNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
P+++ + +++ Y R + EM+++
Sbjct: 593 ILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSN 626
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 132/287 (45%), Gaps = 18/287 (6%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDD--LRSAHSLFRQLPQ 63
LL A + S+ +A ++ M +FT+ L Y C + L A + Q+ +
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLL---YGWCREGKLMEAKEVLVQMKE 264
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
P++ FT++L+ ++ G + +MR +G P+ + +++A + ++
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMD 324
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF----SWNSMM 175
D+ +++ + K G ++ V D+MR++ V ++ +M
Sbjct: 325 EAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIM 384
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----D 231
+ + +E++E M+ GC PD++ N V+ C++G V EA +++ +++
Sbjct: 385 VAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLS 444
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV-FPDAGALSGVL 277
P V ++ +I+G++S G + F+EMV+ G+ P G L +L
Sbjct: 445 PGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLL 491
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 14/229 (6%)
Query: 60 QLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+L +P +F ++ + + ++ +E EM G+ PD YVF +L A + ++ E
Sbjct: 163 ELIEPELFVV--LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKE 220
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMM 175
+LR S+L + + G + A V +M+E D+ + +++
Sbjct: 221 --ASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLL 278
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRM-GLVSEASKVFEQIK---- 230
S Y G A +++ MR G EP+V ++ A CR + EA +VF +++
Sbjct: 279 SGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGC 338
Query: 231 DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS 279
+ +++++T LISG+ G + +M G V P ++V+
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG-VMPSQVTYMQIMVA 386
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMR-------ERDVFSWNSMMSCYVCNGLSQRAVEVL 191
VC S++ + SK + +EMR E ++F +M + + ++AVEVL
Sbjct: 133 VCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRRFASANMVKKAVEVL 190
Query: 192 ESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD---PNVISWTTLISGYSSVG 248
+ M G EPD ++DA C+ G V EASKVFE +++ PN+ +T+L+ G+ G
Sbjct: 191 DEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREG 250
Query: 249 RHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEI 292
+ + + +M G+ PD + +L G +A ++
Sbjct: 251 KLMEAKEVLVQMKEAGLE-PDIVVFTNLLSGYAHAGKMADAYDL 293
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 13/227 (5%)
Query: 51 LRSAHSLFRQLP----QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPK 106
++ AH L + P+V ++++++ + R G + + M+ KG+ P+ Y++
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 107 VLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER 166
++ ++ L E D V +++D + K GD+ A++ F EM R
Sbjct: 322 IIGLLCRICKLAE-AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 167 ----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA 222
DV ++ +++S + G A ++ M G EPD VT +++ YC+ G + +A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 223 SKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+V + PNV+++TTLI G G + + EM G+
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 114/242 (47%), Gaps = 13/242 (5%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ----PNVFAFT 70
L +A++ M+ G T LI + D+R+A F ++ P+V +T
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 71 SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
+I++ + G + + + EM KG+ PD F +++ + A ++
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK-AGHMKDAFRVHNHMIQ 449
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQR 186
++ +++D K GD++ A + EM + ++F++NS+++ +G +
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI----KDPNVISWTTLIS 242
AV+++ G D VT T+MDAYC+ G + +A ++ +++ P ++++ L++
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 243 GY 244
G+
Sbjct: 570 GF 571
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/275 (17%), Positives = 114/275 (41%), Gaps = 13/275 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ + + A ++H++M+ G T LI DL SA+ L ++
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 63 ----QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
QPN+F + SI+ + G + ++ E G++ D + ++ A + + +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK-SGEM 542
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV----FSWNSM 174
+ + N +++ + G +E ++ + M + + ++NS+
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP-- 232
+ Y + A + + M G PD T ++ +C+ + EA +F+++K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 233 --NVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+V +++ LI G+ + + +F +M +G+
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 13/227 (5%)
Query: 51 LRSAHSLFRQLP----QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPK 106
++ AH L + P+V ++++++ + R G + + M+ KG+ P+ Y++
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 107 VLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER 166
++ ++ L E D V +++D + K GD+ A++ F EM R
Sbjct: 322 IIGLLCRICKLAE-AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 167 ----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA 222
DV ++ +++S + G A ++ M G EPD VT +++ YC+ G + +A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 223 SKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+V + PNV+++TTLI G G + + EM G+
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 114/242 (47%), Gaps = 13/242 (5%)
Query: 15 SLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ----PNVFAFT 70
L +A++ M+ G T LI + D+R+A F ++ P+V +T
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 71 SILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXX 130
+I++ + G + + + EM KG+ PD F +++ + A ++
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK-AGHMKDAFRVHNHMIQ 449
Query: 131 XXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQR 186
++ +++D K GD++ A + EM + ++F++NS+++ +G +
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 187 AVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI----KDPNVISWTTLIS 242
AV+++ G D VT T+MDAYC+ G + +A ++ +++ P ++++ L++
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 243 GY 244
G+
Sbjct: 570 GF 571
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/275 (17%), Positives = 114/275 (41%), Gaps = 13/275 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
L+ + + A ++H++M+ G T LI DL SA+ L ++
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 63 ----QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
QPN+F + SI+ + G + ++ E G++ D + ++ A + + +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK-SGEM 542
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV----FSWNSM 174
+ + N +++ + G +E ++ + M + + ++NS+
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP-- 232
+ Y + A + + M G PD T ++ +C+ + EA +F+++K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 233 --NVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+V +++ LI G+ + + +F +M +G+
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 16/239 (6%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+PNV + +++ ++G +E EM KG+ D + +L +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY-SGRWSDAA 231
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV----FSWNSMMSCY 178
D+ +++D++ K G+++ A ++ EM + V ++NS+++
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNV 234
+G A + + M GC P+VVT NT++ +C+ +V E K+F+++ + ++
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIH 293
++ TLI GY VG+ V+L IF MV+ V PD ++ C L L EI
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSR-RVTPD------IITHCILLHGLCVNGEIE 403
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 167 DVFSWNSMMSCYV-CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEA-SK 224
D++S+ ++ C+ C+ LS A+ VL M G EP +VT +++ +C + + +A S
Sbjct: 105 DLYSFTILIHCFCRCSRLS-FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 225 VFEQIK---DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
V +K +PNV+ + TLI G G ++L + EM G+
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 120/280 (42%), Gaps = 48/280 (17%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
NSL+Q +++ A +L M G F LI L A ++ +Q+
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 63 QP----NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
+V + +++ + R+ E + EM GVS + +
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY-------------- 508
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM----RERDVFSWNSM 174
N+++D K VE AA++ D+M ++ D +++NS+
Sbjct: 509 ----------------------NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFE--QIKDP 232
++ + G ++A +++++M +GCEPD+VT T++ C+ G V ASK+ Q+K
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 233 NVI--SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
N+ ++ +I G + ++ +FREM+ PDA
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA-CAQLAALLEXXX 122
P+V F S++ R +E + EMR KG PD + + ++ + C++ L+
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK--GKLDEAL 455
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCY 178
+ N+++D + K A +FDEM R+ ++N+++
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNV 234
+ + A ++++ M ++G +PD T N+++ +CR G + +A+ + + + +P++
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
+++ TLISG GR V+ + R + G+
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 102/227 (44%), Gaps = 11/227 (4%)
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
P+V+ + S+++ + G ++ +E +M + SP+ + ++ + +E
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK-ENQVEEATE 386
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCYV 179
D+ NS++ + A +F+EMR E D F++N ++
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVI 235
G A+ +L+ M + GC V+T NT++D +C+ EA ++F++++ N +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVS-CR 281
++ TLI G R + + +M+ +G PD + +L CR
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK-PDKYTYNSLLTHFCR 552
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
+P+V F ++ R R I +M G+ PD F V++ + L
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF-----SWNSMMSC 177
++ V N ++ + K G VE A EM +D F ++N++++
Sbjct: 246 IREQMVEFGCSWSNVSV-NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI--KD--PN 233
G + A+E+++ M +G +PDV T N+V+ C++G V EA +V +Q+ +D PN
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
+++ TLIS + + + R + + G + PD + ++
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKG-ILPDVCTFNSLI 407
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
N + ++ K D+E + ++FDEM ER D ++ +++SC NG+ +RAVE E M
Sbjct: 179 NVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSS 238
Query: 197 DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP----NVISWTTLISGYSSVGRHGV 252
GCEPD VT ++DAY R G V A ++++ + + ++++TLI Y G +
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298
Query: 253 SLGIFREM 260
L I+ EM
Sbjct: 299 CLNIYEEM 306
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 100/236 (42%), Gaps = 48/236 (20%)
Query: 42 IQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGV 97
++++ DL + LF ++ + P+ FT+I++ ++G+ ++ +E + +M G
Sbjct: 182 MKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGC 241
Query: 98 SPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAA 157
PD +AA+ +D Y + G+V+ A
Sbjct: 242 EPDN----------VTMAAM--------------------------IDAYGRAGNVDMAL 265
Query: 158 RVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAY 213
++D R D ++++++ Y +G + + E M+ G +P++V N ++D+
Sbjct: 266 SLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSM 325
Query: 214 CRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
R +A +++ + PN ++ L+ Y +L I+REM G+
Sbjct: 326 GRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGL 381
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 118/275 (42%), Gaps = 13/275 (4%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+L+ S S A +L M+ F T LI + +L A +L++++ +
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 282
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
PNVF + S++ HG + M KG PD + ++ + + +E
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK-SKRVE 341
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE----RDVFSWNSMM 175
D N+++ Y + G + A +VF+ M + D+ ++N ++
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----D 231
C NG ++A+ ++E ++ + D++T N ++ CR + EA +F +
Sbjct: 402 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
P+ I++ T+ISG G + + R M DG +
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 11/227 (4%)
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
PNV + +++ ++ +E + M KG+ D + ++ + +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSN-SGRWTDAAR 240
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYV 179
++ +++D + K G++ A ++ EM R +VF++NS+++ +
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI---- 235
+G A + + M GC PDVVT NT++ +C+ V + K+F ++ ++
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRC 282
++ TLI GY G+ V+ +F MV+ G V PD +L+ C C
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCG-VSPDI-VTYNILLDCLC 405
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 32/271 (11%)
Query: 11 SASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQL----PQPNV 66
S S+S + A HHY + ++ C A SLF ++ P P++
Sbjct: 33 SLSRSFSGASHHHHY-------------RERLRNELHCIKFDDAFSLFCEMLQSRPIPSI 79
Query: 67 FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXX 126
FT +L ++ I Y +M G+S D Y F +L C + L
Sbjct: 80 VDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT-ILIHCFCRCSRLSLALALLG 138
Query: 127 XXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSW--NSMMSCYVCNGLS 184
+ S+L+ + + + A + D M D F + N ++ V NGL
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM---DGFGFVPNVVIYNTVINGLC 195
Query: 185 Q-----RAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVI 235
+ A+EV M G D VT NT++ G ++A+++ + DPNVI
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+T LI + G + +++EM+ +V
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 127/268 (47%), Gaps = 22/268 (8%)
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V++F ++ G + + E+ G SP+ ++ ++ C + + E
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI-EKAKDL 220
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVF----SWNSMMSCYVC 180
+ R +++ K G + ++++M+E VF ++N +M+
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVIS 236
+G ++ A +V + MR G ++VT NT++ CR ++EA+KV +Q+K +PN+I+
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 237 WTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASG-----KE 291
+ TLI G+ VG+ G +L + R++ + G+ + +LVS C SG KE
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGL--SPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 292 IHGYGLKIMPGEIFYRSAGAALLTLYAR 319
+ G+K P ++ Y L+ +AR
Sbjct: 399 MEERGIK--PSKVTY----TILIDTFAR 420
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMRERDV----FSWNSMMSCYVCNGLSQRAVEVLESMRV 196
N ++ + + GD GAA++ EM ER + ++ ++ + + ++A+++ SM
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 197 DGCEPDVVTRNTVMDAYCRMGLVSEASKVF----EQIKDPNVISWTTLISGYSSVGRHGV 252
G PDV T + ++ +C G ++EAS++F E+ +PN + + T+I GY G
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 253 SLGIFREM 260
+L + +EM
Sbjct: 497 ALKLLKEM 504
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 102/247 (41%), Gaps = 9/247 (3%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+L+ LN+A ++ M G + LI + L A SL R L
Sbjct: 307 NTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
P++ + +++ R G + EM +G+ P + ++ A+ + +E
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR-SDNME 425
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV----FSWNSMM 175
D+ + ++ + G + A+R+F M E++ +N+M+
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVI 235
Y G S RA+++L+ M P+V + +++ C+ EA ++ E++ D +
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Query: 236 SWTTLIS 242
T+++S
Sbjct: 546 PSTSILS 552
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 48/213 (22%)
Query: 69 FTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXX 128
F S++ + GL ++ ++ + M+ G+SP F
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTF------------------------ 176
Query: 129 XXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-----DVFSWNSMMSCYVCNGL 183
NS+L + K G A +FDEMR D +++N++++ + N +
Sbjct: 177 ------------NSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSM 224
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKV----FEQIKD--PNVISW 237
A + + M + C PDVVT NT++D CR G V A V ++ D PNV+S+
Sbjct: 225 VDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSY 284
Query: 238 TTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
TTL+ GY ++ +F +M++ G+ P+A
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLK-PNA 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 37 FTTKLIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEM 92
+ LI+ Y + + + LF+ + Q P+V F S+L+ + G + + EM
Sbjct: 140 YFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM 199
Query: 93 RFK-GVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
R GV+PD Y F ++ + ++++ D+ N+++D + G
Sbjct: 200 RRTYGVTPDSYTFNTLINGFCK-NSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 152 DVEGAARVFDEMRER------DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVT 205
V+ A V M ++ +V S+ +++ Y AV V M G +P+ VT
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 206 RNTVMDAYCRMGLVSEASKVFEQIKD-------------PNVISWTTLISGYSSVGRHGV 252
NT++ +SEA + +++IKD P+ ++ LI + G
Sbjct: 319 YNTLIKG------LSEAHR-YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDA 371
Query: 253 SLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
++ +F+EM+N + PD+ + S VL+ C+
Sbjct: 372 AMKVFQEMLNMKL-HPDSASYS-VLIRTLCM 400
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 10/134 (7%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEM-----RERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
N V+ Y + G ++ + +M R DV S+N++++ + GL A+++ M
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDV-SYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHG 251
G +P+VVT NT++ +CR + EASKVF ++K PN +++ TLI+GYS G H
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 252 VSLGIFREMVNDGM 265
++ + +MV +G+
Sbjct: 361 MAFRFYEDMVCNGI 374
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 10/134 (7%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEM-----RERDVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
N V+ Y + G ++ + +M R DV S+N++++ + GL A+++ M
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDV-SYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHG 251
G +P+VVT NT++ +CR + EASKVF ++K PN +++ TLI+GYS G H
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 252 VSLGIFREMVNDGM 265
++ + +MV +G+
Sbjct: 361 MAFRFYEDMVCNGI 374
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
S L AC+ L+ AK +H M+ G ++ L+ +YA C D+ ++ +F + +
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
+V + +++ + HGLA + I ++EM + VSPD F +L C+ L E
Sbjct: 230 DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYF 289
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMS 176
L +++D+ + G V+ A + + M E DV W S++S
Sbjct: 290 GLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 54 AHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM-RFKGVSPDGYVFPKVLKACA 112
A + R NV + ++ + R+ + ++ M F + P+ + F L ACA
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 113 QLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWN 172
+L L + + ++++D+Y+KCGD+ + VF ++ DV WN
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAI-LSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 173 SMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVF 226
+M++ + +GL+ A+ V M + PD +T ++ GL+ E + F
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYF 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 39/194 (20%)
Query: 139 VCNS--VLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESM-- 194
VCN +++ K G+ A +V +++V +WN M+ YV N + A++ L++M
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 195 ---------------------------------RVD-GCEPDVVTRNTVMDAYCRMGLVS 220
+D G E + + + ++D Y + G +
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIG 217
Query: 221 EASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+ +VF +K +V W +I+G+++ G ++ +F EM + V PD+ G+L +C
Sbjct: 218 TSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAE-HVSPDSITFLGLLTTC 276
Query: 281 RCLGALASGKEIHG 294
G L GKE G
Sbjct: 277 SHCGLLEEGKEYFG 290
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREM 260
P V N ++++ ++G A KV D NVI+W +I GY ++ +L + M
Sbjct: 96 PGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM 155
Query: 261 VNDGMVFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIFYRSAGAALLTLYAR 319
++ + P+ + + L +C LG L K +H L I G +AL+ +YA+
Sbjct: 156 LSFTDIKPNKFSFASSLAACARLGDLHHAKWVH--SLMIDSGIELNAILSSALVDVYAK 212
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 93/181 (51%), Gaps = 13/181 (7%)
Query: 139 VCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESM 194
+ N ++D K + A ++FDEM R + ++N+++ Y G +++ +V E M
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
Query: 195 RVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRH 250
+ D EP ++T NT++ + G+V +A V +++KD P+ +++ L GYSS +
Sbjct: 276 KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Query: 251 GVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL-GALASGKEIHGYGLK--IMPGEIFYR 307
+LG++ V+ G+ +L++ C G + +EI G + ++P E+ Y
Sbjct: 336 EAALGVYETAVDSGVKM--NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 308 S 308
+
Sbjct: 394 T 394
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 113/294 (38%), Gaps = 15/294 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP- 62
N L+ K +N A+QL ML LI Y + + + ++
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKA 277
Query: 63 ---QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+P++ F ++L + G+ EM+ G PD + F + + E
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS-NEKAE 336
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS----WNSMM 175
+ C+ +L+ K G +E A + + + +N+M+
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----D 231
Y G A +E+M G +PD + N ++ +C +G + A K ++K
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGA 285
P+V ++ LI GY I +EM ++G P+ + G L++C C G+
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNG-TMPNVVSY-GTLINCLCKGS 508
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 115/290 (39%), Gaps = 26/290 (8%)
Query: 11 SASKSLNQAK------QLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQP 64
+A K +N+ K + Y +L G + + + K I + +D + P
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT---------MP 492
Query: 65 NVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXX 124
NV ++ +++ + + +M +GVSP ++ ++ C + E
Sbjct: 493 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI-EDAFRF 551
Query: 125 XXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVC 180
+L N+++D S G + A + E+ + DVF++NS++S Y
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 181 NGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTL 240
G QR + + E M+ G +P + T + ++ + G+ E P+++ + +
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGV 671
Query: 241 ISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGK 290
+ Y+ G + + ++M+ + L + LG L GK
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEKSI------GLDKTTYNSLILGQLKVGK 715
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 13/240 (5%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
T LI + L A L+ + Q P+VF + S++ +GL + + + M
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
G P+ ++ ++ + + +E + ++ Y G +
Sbjct: 322 NGCYPNEVIYTTLIHGFCK-SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 155 GAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
A VF++M R D+ ++N ++ CNG ++A+ + E MR + ++VT ++
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 211 DAYCRMGLVSEA----SKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
C++G V +A +F + PNVI++TT+ISG+ G + +F++M DG +
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 105/234 (44%), Gaps = 13/234 (5%)
Query: 39 TKLIQIYADCDDLRSAHSLFRQLP----QPNVFAFTSILAFHSRHGLARQCIETYAEMRF 94
T L+ Y + + A +LF Q+ +PNV +T+++ ++ +E + +M
Sbjct: 157 TSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT 216
Query: 95 KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVE 154
G P+ + ++ ++ + ++ +++D + K G +
Sbjct: 217 NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP-NVITFTALIDAFVKVGKLM 275
Query: 155 GAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVM 210
A +++ M + DVF++ S+++ GL A ++ M +GC P+ V T++
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 211 DAYCRMGLVSEASKVFEQIKDP----NVISWTTLISGYSSVGRHGVSLGIFREM 260
+C+ V + K+F ++ N I++T LI GY VGR V+ +F +M
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 9/237 (3%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQ---IYADCDDLRSAHSLF- 58
+L+ A L +AK+L++ M+ + F LI +Y D+ R L
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 59 RQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
R PN +T+++ + ++ + EM KGV + + +++ L
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC-LVGRP 379
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERD----VFSWNSM 174
+ D+R N +LD G VE A +F+ MR+R+ + ++ +
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD 231
+ G + A ++ S+ G +P+V+T T++ +CR GL+ EA +F+++K+
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Query: 165 ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASK 224
E D+ ++ S+++ Y + A+ + + + G +P+VVT T++ C+ ++ A +
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 225 VFEQI----KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSC 280
+F Q+ PNV+++ L++G +GR G + + R+M+ + P+ + ++ +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVITFTALIDAF 268
Query: 281 RCLGALASGKEIHGYGLKI 299
+G L KE++ +++
Sbjct: 269 VKVGKLMEAKELYNVMIQM 287
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 124/303 (40%), Gaps = 17/303 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N +L+ S+ +N+A ++ M+ HG ++ DL ++ ++ +
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 64 PNV----FAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVF-PKVLKACAQLAALL 118
N+ + ++ S++G + + +MR G + Y F P + C Q L
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQ--GLF 324
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCY 178
+ N + G ++ A + M DV S+N++M Y
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGY 384
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNV 234
+ G A + + +R P +VT NT++D C G + A ++ E++ P+V
Sbjct: 385 IKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDV 444
Query: 235 ISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKEIHG 294
I++TTL+ G+ G ++ ++ EM+ G + PD G + R +G L G
Sbjct: 445 ITYTTLVKGFVKNGNLSMATEVYDEMLRKG-IKPD-----GYAYTTRAVGELRLGDSDKA 498
Query: 295 YGL 297
+ L
Sbjct: 499 FRL 501
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 104/238 (43%), Gaps = 12/238 (5%)
Query: 35 PFFTTKLIQIYADCD--DLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM 92
P +T I I A CD + A L + P+V ++ +++ + + G + + ++
Sbjct: 341 PTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL 400
Query: 93 RFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGD 152
R + P + ++ + + LE D+ +++ + K G+
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCE-SGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGN 459
Query: 153 VEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESM-RVDGCEPDVVTRN 207
+ A V+DEM + D +++ + + G S +A + E M D PD+ N
Sbjct: 460 LSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYN 519
Query: 208 TVMDAYCRMGLVSEA----SKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMV 261
+D C++G + +A K+F P+ +++TT+I GY G+ ++ ++ EM+
Sbjct: 520 VRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 10/222 (4%)
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXX 123
P+ F ++ ++ + + + + EM KG P + ++ A + A E
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK-AKRYEAANE 465
Query: 124 XXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYV 179
RV ++ + KCG + A +F+EM+ + DV+++N++MS V
Sbjct: 466 LFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMV 525
Query: 180 CNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVI 235
G+ A +L M +GC D+ + N +++ + R G+ A ++FE IK P+ +
Sbjct: 526 KAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGV 585
Query: 236 SWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
++ TL+ ++ G + + REM + G + DA S +L
Sbjct: 586 TYNTLLGCFAHAGMFEEAARMMREMKDKGFEY-DAITYSSIL 626
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEM-RERDVF----SWNSMMSCYVCNGLSQRAVEVLESMR 195
NSV+ M + G E V+ EM E D F ++++++S Y G + A+ + + M+
Sbjct: 201 NSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK 260
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHG 251
+ +P T++ Y ++G V +A +FE++K P V ++T LI G GR
Sbjct: 261 DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVD 320
Query: 252 VSLGIFREMVNDGMVFPDAGALSGVL 277
+ G +++M+ DG+ PD L+ ++
Sbjct: 321 EAYGFYKDMLRDGLT-PDVVFLNNLM 345
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 14/233 (6%)
Query: 41 LIQIYADCDDLRSAHSLFRQLP----QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
LI Y SA LF ++ QP +T++L + + G + ++ + EM+ G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
SP Y + +++K + A ++ D+ N+++++ K G VE
Sbjct: 299 CSPTVYTYTELIKGLGK-AGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 157 ARVFDEMR----ERDVFSWNSMM-SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD 211
VF EM V S+N+++ + + + M+ D P T + ++D
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 212 AYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREM 260
YC+ V +A + E++ + P ++ +LI+ R+ + +F+E+
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 94/219 (42%), Gaps = 48/219 (21%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRH----GLARQCIETYAEMRFKG 96
LI +A+ LF++L + + + A +H G + ++ + EM+ +G
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
PD Y + N+++ K G + A
Sbjct: 510 SGPDVYAY------------------------------------NALMSGMVKAGMINEA 533
Query: 157 ARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDA 212
+ +M E D+ S N +++ + G+ +RA+E+ E+++ G +PD VT NT++
Sbjct: 534 NSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGC 593
Query: 213 YCRMGLVSEASKVFEQIKDP----NVISWTTLISGYSSV 247
+ G+ EA+++ ++KD + I++++++ +V
Sbjct: 594 FAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 128/296 (43%), Gaps = 15/296 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP- 62
NSL+ + A ++ H M G + T L+ + + A+++ ++
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 63 ---QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+PN F +++ + + +E + EM KG PD Y F ++ ++ ++
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE-IK 511
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEM----RERDVFSWNSMM 175
+ N++++ + + G+++ A ++ +EM D ++NS++
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI----KD 231
G +A + E M DG P ++ N +++ CR G+V EA + +++
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALA 287
P+++++ +LI+G GR L +FR++ +G+ P L+S C G
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI--PPDTVTFNTLMSWLCKGGFV 685
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 113/272 (41%), Gaps = 18/272 (6%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ-- 63
+++A A ++ A L M HG LI + C+ + A L ++
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 64 --PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P+ F ++ + + + M +G +PD + ++ ++ +
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV---- 338
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER-----DVFSWNSMMS 176
++ + N+++ + G ++ A V +M DV ++NS++
Sbjct: 339 -DAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DP 232
Y GL A+EVL MR GC+P+V + ++D +C++G + EA V ++ P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 233 NVISWTTLISGYSSVGRHGVSLGIFREMVNDG 264
N + + LIS + R ++ IFREM G
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 10/234 (4%)
Query: 41 LIQIYADCDDLRSAHSLFRQLPQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKG 96
+++ + +++ SA SL R + + PN + +++ S+ + ++ EM G
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 97 VSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGA 156
PD F V+ + + E D+ +++ K G V+ A
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY-GYLMNGLCKIGRVDAA 341
Query: 157 ARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVD-GCEPDVVTRNTVMDAYCR 215
+F + + ++ +N+++ +V +G A VL M G PDV T N+++ Y +
Sbjct: 342 KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 216 MGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
GLV A +V +++ PNV S+T L+ G+ +G+ + + EM DG+
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 148 SKCGDVEGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDV 203
SKC V A ++ +EM D ++N ++ A +++ M + G PD
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDD 322
Query: 204 VTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTTLISGYSSVGRHGVSLGIFREMVND 263
+T +M+ C++G V A +F +I P ++ + TLI G+ + GR + + +MV
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 264 GMVFPDA 270
+ PD
Sbjct: 383 YGIVPDV 389
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Query: 83 RQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNS 142
R+ + E+ KG PD F + ++CA L +L E D ++ N
Sbjct: 218 RRLYKDAIELLDKGAMPDRECFVLLFESCANLKSL-EHSKKVHDHFLQSKFRGDPKLNNM 276
Query: 143 VLDMYSKCGDVEGAARVFDEMRERDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPD 202
V+ M+ +C + A RVFD M ++D+ SW+ MM Y NG+ A+ + E M G +P+
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 203 VVTRNTVMDAYCRMGLVSEASKVFEQIKDPNVISWTT 239
T TV A +G + EA F+ +K+ + IS T
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKT 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 90/227 (39%), Gaps = 7/227 (3%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPN 65
L ++C+ KSL +K++H + L P +I ++ +C + A +F + +
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
+ ++ ++ +S +G+ + + EM G+ P+ F V ACA + + E
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFD 361
Query: 126 XXXXXXXXXXDLRVCNSVLDMYSKCGD-VEGAARVFDEMRERDVFSWNSMMSCYVCNGLS 184
VL + KCG VE + D E W +M + +G
Sbjct: 362 SMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG-D 420
Query: 185 QRAVEVLESMRVDGCEPDVVTRNTV----MDAYCRMGLVSEASKVFE 227
+ +E + VD +P N + ++ +V+ S++ E
Sbjct: 421 IDLEDYMEELMVD-VDPSKAVINKIPTPPPKSFKETNMVTSKSRILE 466
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 118/261 (45%), Gaps = 49/261 (18%)
Query: 57 LFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAA 116
+ R P+V +TS++ + G + +E +MR +G+ P+
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE--------------- 380
Query: 117 LLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWN 172
R +++D +S+ G + A RV EM + V ++N
Sbjct: 381 ---------------------RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 173 SMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD- 231
++++ + G + A+ VLE M+ G PDVV+ +TV+ +CR V EA +V ++ +
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 232 ---PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL-GALA 287
P+ I++++LI G+ R + ++ EM+ G+ PD + L++ C+ G L
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP-PDEFTYTA-LINAYCMEGDLE 537
Query: 288 SGKEIHGYGLK--IMPGEIFY 306
++H ++ ++P + Y
Sbjct: 538 KALQLHNEMVEKGVLPDVVTY 558
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 111/278 (39%), Gaps = 49/278 (17%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+L++ + +QA +H ML HG T LI ++ A Q+
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
PN +T+++ S+ G + EM G SP +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY--------------- 418
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMM 175
N++++ + G +E A V ++M+E+ DV S+++++
Sbjct: 419 ---------------------NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI----KD 231
S + + A+ V M G +PD +T ++++ +C EA ++E++
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPD 269
P+ ++T LI+ Y G +L + EMV G V PD
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKG-VLPD 554
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 141 NSVLDMYSKCG-DVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMR 195
N+VLD + ++ A VF EM E +VF++N ++ + G A+ + + M
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 232
Query: 196 VDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHG 251
GC P+VVT NT++D YC++ + + K+ + +PN+IS+ +I+G GR
Sbjct: 233 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 292
Query: 252 VSLGIFREMVNDG 264
+ EM G
Sbjct: 293 EVSFVLTEMNRRG 305
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 107/257 (41%), Gaps = 48/257 (18%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ- 63
SL+ + + ++N+A + M + G T L+ ++ + A+ + R++
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 64 ---PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
P+V + +++ H G I +M+ KG+SPD + VL
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG---------- 459
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMS 176
+ + DV+ A RV EM E+ D +++S++
Sbjct: 460 --------------------------FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----P 232
+ ++ A ++ E M G PD T +++AYC G + +A ++ ++ + P
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 233 NVISWTTLISGYSSVGR 249
+V++++ LI+G + R
Sbjct: 554 DVVTYSVLINGLNKQSR 570
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 151 GDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTR 206
G+++ A +FD+M + +V ++N+++ Y ++L SM + G EP++++
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 207 NTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGIFREMVN 262
N V++ CR G + E S V ++ + +++ TLI GY G +L + EM+
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 263 DGMV 266
G+
Sbjct: 339 HGLT 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 99/228 (43%), Gaps = 26/228 (11%)
Query: 64 PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKA-CAQLAALLEXXX 122
P+V +++++L+ R + + EM KG+ PD + +++ C Q +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT--KEAC 505
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCY 178
D ++++ Y GD+E A ++ +EM E+ DV +++ +++
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMD---------------AYCRMGLVSEAS 223
++ A +L + + P VT +T+++ +C G+++EA
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 224 KVFEQI----KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVF 267
+VFE + P+ ++ +I G+ G + +++EMV G +
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 33 RKPFFTTKLIQIYADCDDLRSAHSLFRQLPQPNVFAFTSILAFHSRHGLARQCIETYAEM 92
R P +I + D A ++P V ++T+I+ ++R ++ I ++ M
Sbjct: 187 RNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRM 246
Query: 93 RF-KGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCG 151
+ P+ +L A L L D+RV NS++D Y+KCG
Sbjct: 247 VACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCG 306
Query: 152 DVEGAARVFDEMRE--RDVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTV 209
++ A + F E+ +++ SW +M+S + +G+ + AV + + M G +P+ VT +V
Sbjct: 307 CIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISV 366
Query: 210 MDAYCRMGLVSEA------SKVFEQIKDPNVISWTTLISGYSSVGR 249
++A GL E + V E P+V + L+ GR
Sbjct: 367 LNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGR 412
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 124/279 (44%), Gaps = 14/279 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
N+++ A + + + + M G T L+++ + A LF ++ +
Sbjct: 263 NTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE 322
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
+V +TS+++++ R G ++ + E+ KG+SP Y + ++ ++ +
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA 382
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMM 175
+ V N+++D Y + G V+ A+ ++D M ++ DVF+ N++
Sbjct: 383 AEILMNEMQSKGVNITQV-VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----D 231
SC+ A + L M G + V+ ++D YC+ G V EA ++F ++
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQ 501
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDA 270
PN I++ +I Y G+ + + M +GM PD+
Sbjct: 502 PNAITYNVMIYAYCKQGKIKEARKLRANMEANGMD-PDS 539
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 68 AFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXX 127
F +++ + R G+ + Y M KG D + + +L E
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 128 XXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDV----FSWNSMMSCYVCNGL 183
+ N ++D+Y K G+VE A R+F EM + V ++N M+ Y G
Sbjct: 461 MEGGVKLSTVSYTN-LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 184 SQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTT 239
+ A ++ +M +G +PD T +++ C V EA ++F ++ D N +++T
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 240 LISGYSSVGRHGVSLGIFREMVNDG 264
+ISG S G+ + G++ EM G
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 19/196 (9%)
Query: 66 VFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXX 125
V++ T ++ R G + + E KG+ P+ Y + ++ A ++
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIIN------AYVKQRDFSG 277
Query: 126 XXXXXXXXXXDLRVCNSV-----LDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMS 176
D V N V +++ K G + A ++FDEMRER DV + S++S
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 177 CYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDPNV-- 234
G +RA + + + G P T ++D C++G + A + +++ V
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397
Query: 235 --ISWTTLISGYSSVG 248
+ + TLI GY G
Sbjct: 398 TQVVFNTLIDGYCRKG 413
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 14/260 (5%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTT--KLIQIYADCDDLRSAHSLFRQL 61
NSL Q + +++A+++ ML G KP T +I Y L A L+ +
Sbjct: 554 NSLFQMLAGVDLVDEAQRILAEMLDSGC--KPGCKTYAAMIASYVRLGLLSDAVDLYEAM 611
Query: 62 PQ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
+ PN + S++ + G+ + I+ + M GV + V ++KA +++ L
Sbjct: 612 EKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCL 671
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER---DVFSWNSM 174
E D+ NS+L + + G V A +F+ +RE+ DV S+ +M
Sbjct: 672 -EEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATM 730
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQ--IKDP 232
M Y G+ A+EV E MR G D + N VM Y G +SE ++F + ++
Sbjct: 731 MYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERK 790
Query: 233 NVISWTTLISGYSSVGRHGV 252
++ W T + ++ + + GV
Sbjct: 791 LLLDWGTFKTLFTLLKKGGV 810
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 102/266 (38%), Gaps = 19/266 (7%)
Query: 20 KQLHHYMLLHGSHRKPFFTTK---LIQIYADCDDLRSAHSLFRQLPQPNV----FAFTSI 72
K LH S RKP T+ LI +Y L A +LF ++ + V F ++
Sbjct: 287 KSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTM 346
Query: 73 LAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXXXXXXXXXXXX 132
+ HG + +M KG+SPD + +L A A +E
Sbjct: 347 IHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHAD-AGDIEAALEYYRKIRKVG 405
Query: 133 XXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAV 188
D +VL + + V V EM D S +M YV GL +A
Sbjct: 406 LFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAK 465
Query: 189 EVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-----PNVISWTTLISG 243
+ E ++D C T V+D Y GL EA VF ++ +V+ + +I
Sbjct: 466 ALFERFQLD-CVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKA 524
Query: 244 YSSVGRHGVSLGIFREMVNDGMVFPD 269
Y H +L +F+ M N G +PD
Sbjct: 525 YGKAKLHEKALSLFKGMKNQG-TWPD 549
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 119/309 (38%), Gaps = 46/309 (14%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
N+++ C L++A+ L M G L+ ++AD D+ +A +R++
Sbjct: 343 FNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIR 402
Query: 63 Q----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLK--------- 109
+ P+ ++L + + + AEM + D + P +++
Sbjct: 403 KVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVV 462
Query: 110 ---------------ACAQLAALL----------EXXXXXXXXXXXXXXXXDLRVCNSVL 144
+ LAA++ E D+ N ++
Sbjct: 463 QAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMI 522
Query: 145 DMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCE 200
Y K E A +F M+ + D ++NS+ L A +L M GC+
Sbjct: 523 KAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCK 582
Query: 201 PDVVTRNTVMDAYCRMGLVSEASKVFEQIK----DPNVISWTTLISGYSSVGRHGVSLGI 256
P T ++ +Y R+GL+S+A ++E ++ PN + + +LI+G++ G ++
Sbjct: 583 PGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQY 642
Query: 257 FREMVNDGM 265
FR M G+
Sbjct: 643 FRMMEEHGV 651
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 109/274 (39%), Gaps = 48/274 (17%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP- 62
N+LL+ + L A+ + M G + LI Y + SA + +++
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 63 ---QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
QPN F F+ +LA G ++ + EM+ GV PD +
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY--------------- 447
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMM 175
N V+D + K ++ A FD M E D +WN+++
Sbjct: 448 ---------------------NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD---- 231
C+ +G A E+ E+M GC P T N ++++Y + ++ ++K
Sbjct: 487 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
PNV++ TTL+ Y GR ++ EM + G+
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 580
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 141 NSVLDMYSKCGDVEGAARVFDEMR----ERDVFSWNSMMSCYVCNGLSQRAVEVLESMRV 196
+++D+Y K G A +EM+ + +N++++ Y GLS++AV M
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS 612
Query: 197 DGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGV 252
DG +P ++ N++++A+ +EA V + +K+ P+V+++TTL+ V +
Sbjct: 613 DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Query: 253 SLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
++ EM+ G PD A S + + R +
Sbjct: 673 VPVVYEEMIMSG-CKPDRKARSMLRSALRYM 702
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 129/307 (42%), Gaps = 49/307 (15%)
Query: 4 NSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ 63
NSL+ S +K +++A+ M+ +G F I Y + + SA +++ +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 64 ----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLE 119
PN T ++ + + G KV++AC+ ++++
Sbjct: 551 CGVLPNKVLCTGLINEYCKKG-------------------------KVIEACSAYRSMVD 585
Query: 120 XXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMM 175
D + +++ K V+ A +F EMR + DVFS+ ++
Sbjct: 586 QGILG-----------DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 176 SCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIK----D 231
+ + G Q+A + + M +G P+V+ N ++ +CR G + +A ++ +++
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 232 PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCLGALASGKE 291
PN +++ T+I GY G + +F EM G+V PD+ + ++ C L +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV-PDSFVYTTLVDGCCRLNDVERAIT 753
Query: 292 IHGYGLK 298
I G K
Sbjct: 754 IFGTNKK 760
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 112/273 (41%), Gaps = 13/273 (4%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLPQ-- 63
L+ ++ + AK L H M+ HG + KP+ I + + + A +LF +
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 64 --PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
P A+ S++ + R RQ E EM+ + + Y + V+K + L+
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS-SGDLDGA 436
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSC 177
++ + +++ + + A RV EM+E+ D+F +NS++
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 178 YVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PN 233
A L M +G +P+ T + Y + A K +++++ PN
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 234 VISWTTLISGYSSVGRHGVSLGIFREMVNDGMV 266
+ T LI+ Y G+ + +R MV+ G++
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 119/276 (43%), Gaps = 19/276 (6%)
Query: 5 SLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP-- 62
SL++ K++ Q +L M P+ +++ DL A+++ +++
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 63 --QPNVFAFTSILAF---HSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAAL 117
+PNV +T+++ +SR G A + ++ EM+ +G++PD + + ++ ++ A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLK---EMKEQGIAPDIFCYNSLIIGLSK-AKR 502
Query: 118 LEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRERDVFS----WNS 173
++ + + + Y + + A + EMRE V
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 174 MMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD-- 231
+++ Y G A SM G D T +M+ + V +A ++F +++
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 232 --PNVISWTTLISGYSSVGRHGVSLGIFREMVNDGM 265
P+V S+ LI+G+S +G + IF EMV +G+
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 119/295 (40%), Gaps = 23/295 (7%)
Query: 6 LLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP--- 62
L+ S ++ +A + M+ G L+ + ++ A L ++
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 63 -QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXX 121
PN + +I+ + + G + + EM+ KG+ PD +V+ ++ C +L +
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV--ER 750
Query: 122 XXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARV--------FDEMRERDVFSWNS 173
N++++ K G E V FD + + ++N
Sbjct: 751 AITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 174 MMSCYVCN-GLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQI--- 229
M+ Y+C G + A E+ M+ P V+T ++++ Y +MG +E VF++
Sbjct: 811 MID-YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869
Query: 230 -KDPNVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVLVSCRCL 283
+P+ I ++ +I+ + G +L + +M V D LS + +CR L
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV-DDGCKLS--ISTCRAL 921
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
Query: 142 SVLDMYSKCGDVEGAARVFDEMRERDV----FSWNSMMSCYVCNGLSQRAVEVLESMRVD 197
S+++ Y + +V + EM++R++ +++ +++ +G A +++ M
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 198 GCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD----PNVISWTTLISGYSSVGRHGVS 253
GC P+VV T++ + + +A +V +++K+ P++ + +LI G S R +
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 254 LGIFREMVNDGM---VFPDAGALSGVLVSCRCLGALASGKEIHGYGLKIMPGEIF 305
EMV +G+ F +SG + + A KE+ G ++P ++
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG--VLPNKVL 559
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 117/258 (45%), Gaps = 14/258 (5%)
Query: 50 DLRSAHSLFRQLP----QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFP 105
D+ A +L ++ + +V F +I+ ++ + + EM KG+ P+ +
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 106 KVLKACAQLAALLEXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRE 165
++ +C +L N+++D + K G A ++ D+M +
Sbjct: 225 SLI-SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 166 R----DVFSWNSMMSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSE 221
R D+F++NS+++ + + +A ++ E M C PD+ T NT++ +C+ V +
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 222 ASKVFEQIKDP----NVISWTTLISGYSSVGRHGVSLGIFREMVNDGMVFPDAGALSGVL 277
+++F ++ + +++TTLI G G + +F++MV+DG V PD S +L
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDIMTYSILL 402
Query: 278 VSCRCLGALASGKEIHGY 295
G L E+ Y
Sbjct: 403 DGLCNNGKLEKALEVFDY 420
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 109/270 (40%), Gaps = 13/270 (4%)
Query: 3 LNSLLQACSASKSLNQAKQLHHYMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQLP 62
N+L+ A +A++LH M+ F LI + D L A +F +
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 63 Q----PNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALL 118
P++ + +++ + E + EM +G+ D + +++
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC- 376
Query: 119 EXXXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSM 174
+ D+ + +LD G +E A VFD M++ D++ + +M
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 175 MSCYVCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKD--- 231
+ G ++ S+ + G +P+VVT NT++ C L+ EA + +++K+
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 232 -PNVISWTTLISGYSSVGRHGVSLGIFREM 260
P+ ++ TLI + G S + REM
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 63 QPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEXXX 122
PN+ F +++ + G + + + +M + + PD + + ++ + L+
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC-MHDRLDKAK 310
Query: 123 XXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMRER----DVFSWNSMMSCY 178
DL N+++ + K VE +F EM R D ++ +++
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 179 VCNGLSQRAVEVLESMRVDGCEPDVVTRNTVMDAYCRMGLVSEASKVFEQIKDP----NV 234
+G A +V + M DG PD++T + ++D C G + +A +VF+ ++ ++
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 235 ISWTTLISGYSSVGR 249
+TT+I G G+
Sbjct: 431 YIYTTMIEGMCKAGK 445
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 3/199 (1%)
Query: 3 LNSLLQACSASKSLNQAKQLHH--YMLLHGSHRKPFFTTKLIQIYADCDDLRSAHSLFRQ 60
L +L+AC+ + KQ+H + L + + LI+ Y + L A+ + Q
Sbjct: 196 LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQ 255
Query: 61 LPQPNVFAFTSILAFHSRHGLARQCIETYAEMRFKGVSPDGYVFPKVLKACAQLAALLEX 120
L N A+ + + R G ++ I + EM G+ + VF VLKAC+ ++
Sbjct: 256 LSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRS 315
Query: 121 XXXXXXXXXXXXXXXDLRVCNSVLDMYSKCGDVEGAARVFDEMR-ERDVFSWNSMMSCYV 179
D + +++MY K G V+ A +VF + E V WN+M++ Y+
Sbjct: 316 GQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYM 375
Query: 180 CNGLSQRAVEVLESMRVDG 198
NG+ A+++L M+ G
Sbjct: 376 QNGIYIEAIKLLYQMKATG 394