Miyakogusa Predicted Gene

Lj0g3v0234699.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0234699.1 tr|G7IVI5|G7IVI5_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_3g010870 PE=4
SV=1,36.5,9e-19,FBA_1,F-box associated domain, type 1; F_box_assoc_1:
F-box protein interaction domain,F-box associa,CUFF.15349.1
         (199 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction ...    53   2e-07
AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction ...    53   2e-07

>AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction
           domains-containing protein | chr4:7441815-7443157
           FORWARD LENGTH=413
          Length = 413

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 66/121 (54%), Gaps = 19/121 (15%)

Query: 37  GTFAYGTIYWI-----ASVVWDSKKRFIVCLDVGKESFQELRLPKLD-----DLNLTLGV 86
           G  A  +++W+       + ++     IV  D+  E F+ +R P+       D+ + +GV
Sbjct: 212 GVLAGNSLHWVLPRRPGLIAFN----LIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGV 267

Query: 87  LRDCLCVV-SHEQLFWDIWVIKEHG--KCWTKLFSI--PEDCSCFPLNQPHYISEDKEEL 141
           L  CLC++ +++Q + D+W++KE+     WTK+F++  P+    F   +P   S+DK+++
Sbjct: 268 LDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKV 327

Query: 142 L 142
           L
Sbjct: 328 L 328


>AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction
           domains-containing protein | chr4:7441815-7443157
           FORWARD LENGTH=413
          Length = 413

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 66/121 (54%), Gaps = 19/121 (15%)

Query: 37  GTFAYGTIYWI-----ASVVWDSKKRFIVCLDVGKESFQELRLPKLD-----DLNLTLGV 86
           G  A  +++W+       + ++     IV  D+  E F+ +R P+       D+ + +GV
Sbjct: 212 GVLAGNSLHWVLPRRPGLIAFN----LIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGV 267

Query: 87  LRDCLCVV-SHEQLFWDIWVIKEHG--KCWTKLFSI--PEDCSCFPLNQPHYISEDKEEL 141
           L  CLC++ +++Q + D+W++KE+     WTK+F++  P+    F   +P   S+DK+++
Sbjct: 268 LDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKKV 327

Query: 142 L 142
           L
Sbjct: 328 L 328