Miyakogusa Predicted Gene
- Lj0g3v0233919.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0233919.1 tr|Q337H7|Q337H7_ORYSJ Os10g0495200 protein
OS=Oryza sativa subsp. japonica GN=Os10g0495200 PE=4
SV=,27.47,5e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptid,CUFF.15289.1
(242 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 3e-41
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 1e-34
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 2e-34
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 4e-34
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 4e-34
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 3e-33
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 137 5e-33
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 7e-33
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 7e-33
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 1e-32
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 1e-32
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 2e-32
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 5e-32
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 7e-32
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 1e-31
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 3e-31
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 3e-31
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 5e-31
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 2e-30
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 4e-30
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 4e-30
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 4e-30
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 5e-30
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 6e-30
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 127 7e-30
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 8e-30
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 2e-29
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 3e-29
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 4e-29
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 4e-29
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 6e-29
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 123 9e-29
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 1e-28
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 1e-28
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 122 2e-28
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 3e-28
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 5e-28
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 7e-28
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 1e-27
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 3e-27
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 5e-27
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 9e-27
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 116 1e-26
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 2e-26
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 2e-26
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 2e-26
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 2e-26
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 2e-26
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 2e-26
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 2e-26
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 3e-26
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 6e-26
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 6e-26
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 1e-25
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 1e-25
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 112 2e-25
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 2e-25
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 7e-25
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 7e-25
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 8e-25
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 110 1e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 110 1e-24
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 1e-24
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 1e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 3e-24
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 4e-24
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 6e-24
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 7e-24
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 1e-23
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 1e-23
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 1e-23
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 106 2e-23
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 106 2e-23
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 2e-23
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 3e-23
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 4e-23
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 5e-23
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 6e-23
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 6e-23
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 103 1e-22
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 3e-22
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 4e-22
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 100 1e-21
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 99 2e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 4e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 5e-21
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 5e-21
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 6e-21
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 6e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 97 7e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 97 8e-21
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 9e-21
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 9e-21
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 96 2e-20
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 96 2e-20
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 6e-20
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 7e-20
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 9e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 94 9e-20
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 92 4e-19
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 5e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 5e-19
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 6e-19
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 9e-19
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 2e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 89 4e-18
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 5e-18
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 6e-18
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 8e-18
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 2e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 3e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 3e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 4e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 7e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 7e-17
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 83 2e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 81 6e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 81 6e-16
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 80 1e-15
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 3e-15
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 78 5e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 5e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 78 7e-15
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 8e-15
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 9e-15
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 9e-15
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 2e-14
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-14
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 4e-14
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 75 5e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 74 7e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 5e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 68 5e-12
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 9e-12
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 2e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 66 2e-11
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-11
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 65 3e-11
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 64 1e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 64 1e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 64 1e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 1e-10
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-10
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 62 5e-10
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 61 6e-10
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 7e-10
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 8e-10
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 9e-10
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 9e-10
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 9e-10
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 60 1e-09
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-09
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 6e-09
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 8e-09
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 9e-09
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 9e-09
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 9e-09
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 57 1e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 57 1e-08
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 56 2e-08
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 56 3e-08
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 55 3e-08
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 55 4e-08
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 55 5e-08
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 5e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 54 7e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 7e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 7e-08
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 54 8e-08
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 54 1e-07
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 54 1e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 53 2e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 52 3e-07
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 52 4e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 52 4e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 6e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 51 6e-07
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 51 6e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 51 8e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 51 8e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 8e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 1e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 50 1e-06
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 1e-06
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 50 2e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 5e-06
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 5e-06
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 5e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 48 6e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 8e-06
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 47 9e-06
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 164 bits (416), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 133/230 (57%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ G G + EA+ L+ M G +P++ I+ R + G + KL
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
DMLRKG PS VTFN++I CR+ L +L MP+ GC P++ +YN L++ +C +
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K A+++L M+ GC P + T++T++ ALC++G V +A ++ +++ G +P Y
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
NT++DG KA + G+A L +EMR K + PD +T++ LVGG + G+ E
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 118/227 (51%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NT++R + G + +A++VL RM P + TIL R G KL
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M +G P VT+NV++ G C++ L L+ MP GC P+ T+NI++ + C
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ A L M++ G PS+ TF+ +++ LCR+G + A + +++ G PN+ Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
N L+ G+ K +++ +A E M +G PD VT+N ++ K G+
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 3/224 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N ++ G+ G I AL VL RM V P + + R L G ++
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
ML++ P +T+ ++I CR G+ LL M GC PD TYN+L+N C +
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ A+ +LN M +GC+P++ T + I+ ++C G ++A K+ + G +P+ +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
N L++ + +G+A + E+M G P+ +++N L+ G K
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 3/222 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N +R + G + E L M G P + T L R R+G K+ + +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P +T+NVMI G+C+ + + L ++ + PD TYN ++ + C GK
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEI---NNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
AM+ L+ M++ C P + T++ ++ A CR+ V A K+ D ++D G P+ YN L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
G K + +A +M G P+ +T NI++ GR
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 54 FRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGC 113
R ++R G+ +K ++M+ G P + +I GFCR +L ++ G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 114 DPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
PD TYN++I+ YC G+ + A+ L+ M P + T++TI+ +LC G + +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 174 VFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
V DR+ P+ Y L++ + +G A L +EMR +G +PD VT+N+LV G
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 234 KYGRNGE 240
K GR E
Sbjct: 286 KEGRLDE 292
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
N L+ G++ A+D+L +M G +P+ + L + + + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ +G P VT+N M+ C+ + +L+ + GC P TYN +I+ GKT
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A+ L+ M +P T+S+++ L REG V EA K F + MGI PN +N++
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
M G K+R+ +A M +G P+ ++ IL+ G
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 87/178 (48%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NT++ G + +A+++L+++ G P L + L + G G KL
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M K +P ++T++ ++ G R+ + H + G P+A T+N ++ C
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+T A+D+L M+ GC+P+ +++ ++ L EG EA ++ + + + G+ ++
Sbjct: 533 RQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ GF + A++ L RM G P + + L + G ++ +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P +T+N +I G + LL M PD TY+ L+ +GK
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ + + + G P+ TF++IM LC+ A + + G PN T Y L++
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 196 GYVKAREIGQANMLYEEMRGKGV 218
G +A L E+ KG+
Sbjct: 563 GLAYEGMAKEALELLNELCNKGL 585
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 122/229 (53%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E+D + NT++ G + +AL++ M + G+RP + + L L G + +
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L DM+ + P+ VTF+ +I F ++ LV E L M K DPD FTY+ LIN +C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + A +M+ C P++ T+ST++ C+ V E ++F + G+ NT
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y TL+ G+ +AR+ A M++++M GV P+ +T+NIL+ G K G+
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M+ +G+ L +I R + M++ G P VT + ++ G+C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ + +L+ M + G PD FT+ LI+ + K S A+ ++ M++ GC+P + T+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
T+++ LC+ G++ A + +++ I + IYNT++DG K + + A L+ EM
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
KG+ PD T++ L+ YGR
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGR 308
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE D L++L+ G+ + I +A+ ++ +M ++G +P T L L
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+++G +P VT+ ++ G C++ + + SLL M K + D YN +I+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C A++ M G P + T+S+++ LC G +A ++ + + I PN
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++ L+D +VK ++ +A LY+EM + + PD T++ L+ G + R E
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y+ D TL+ G EA+ ++ +M G +P L + L + GD
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L K M + V +N +I G C+ + + +L M G PD FTY+ LI+
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G+ S A L+ M++ P++ TFS ++ A +EG ++EA K++D + I P+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y++L++G+ + +A ++E M K P+ VT++ L+ G K R E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF DM++ P PS V FN ++ + + SL M G D +TY+I IN +C
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + S+A+ L MMK G EP + T S++++ C + +A + D++ +MG P+T
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ TL+ G + +A L ++M +G PD VT+ +V G K G
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+TL++GF + E +++ M G+ + T L + D + +FK M+
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P+ +T+N+++ G C+ L + + + +PD +TYNI+I C GK
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
+ + G P++ ++T++ CR+G+ EA + ++++ G PN+ YNTL+
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
++ + + L +EMR G + D T ++
Sbjct: 582 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 111/228 (48%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D ++L+ GF + EA + M P++ + L + + +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF++M ++G ++VT+ +I GF + + + + M G P+ TYNIL++ C
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK + AM + ++ EP + T++ ++ +C+ G V + ++F + G++PN
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
YNT++ G+ + +A+ L ++M+ G P+ T+N L+ + G
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G G + +A+ V ++ + P + I+ + + G W+LF ++
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P+ + +N MI GFCR+ +SLL M + G P++ TYN LI A G
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHAL 162
+ + + M G +T + + L
Sbjct: 592 SAELIKEMRSCGFAGDASTIGLVTNML 618
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 121/229 (52%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E+D + T++ N + +AL++ M + G+RP++ L R L G + +
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L DM+ + P+ VTF+ +I F ++ LV E L M K DPD FTY+ LIN +C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + A +M+ C P++ T++T++ C+ V E ++F + G+ NT
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YNTL+ G +A + A ++++M GV PD +T++IL+ G KYG+
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
EY+ + NTL+ G EA+ ++ RM G +P L + L + GD
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
L K M + V + +I C + + +L M G P+ TYN LI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
C G+ S A L+ M++ P++ TFS ++ A +EG ++EA K++D + I P+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y++L++G+ + +A ++E M K P+ VT+N L+ G K R E
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL++GF + E +++ M G+ + L + L + GD K+FK M+
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P +T+++++ G C+ L + + K +PD +TYNI+I C GK
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
D + G +P++ ++T++ CR+G EA +F +++ G PN+ YNTL+
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
++ + + L +EMR G D T ++++
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D T++ G G I AL +L +M + + T + L +
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF +M KG RP+ VT+N +I C LL M + +P+ T++ LI+A+
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+GK A + M+K +P + T+S++++ C + EA+ +F+ + PN
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
YNTL+ G+ KA+ + + L+ EM +G+ + VT+N L+ G ++ G
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 112/233 (48%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE D L++L+ G+ + I EA+ ++ +M + +P+ L L
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+ +G +P T+ ++ G C++ + + SLL M K + D Y +I+A
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C + A++ M G P++ T+++++ LC G +A ++ + + I PN
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++ L+D +VK ++ +A LY+EM + + PD T++ L+ G + R E
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
RM+++ + L + IL R + M++ G P VT + ++ G+C
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ + +L+ M P+ T+N LI+ + K S A+ ++ M+ GC+P + T+
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
T+++ LC+ G++ A + +++ I + IY T++D + + A L+ EM
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
KG+ P+ VT+N L+ YGR
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGR 305
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF +M++ P PS V FN ++ + + SL M D ++YNILIN +C
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + +A+ L MMK G EP + T S++++ C + EA + D++ M PNT
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+NTL+ G + +A L + M +G PD T+ +V G K G
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D ++L+ GF + EA + M P++ L + + +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF++M ++G ++VT+N +I G + + + + M G PD TY+IL++ C
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK A+ + K+ EP + T++ ++ +C+ G V + +F + G+ PN
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
IY T++ G+ + +A+ L+ EM+ G P+ T+N L+ + G
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ L+ F+ G + EA + M + P + + L +F+ M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ K P+ VT+N +I GFC+ + + G L M + G + TYN LI G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+A M+ +G P + T+S ++ LC+ G + +A VF+ +Q + P+ YN +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
++G KA ++ L+ + KGV P+ + + ++ G + G E +
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 4/185 (2%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL++G G A + +M GV P + +IL L + G +F+ + +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P T+N+MI G C+ + G L + G P+ Y +I+ +C KG
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT----IYN 191
A M ++G P+ T++T++ A R+G+ + ++ ++ G + + + N
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Query: 192 TLMDG 196
L DG
Sbjct: 614 MLHDG 618
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ G G + +AL V ++ + P + I+ + + G W LF
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ KG +P+ + + MI GFCR+ ++L M + G P++ TYN LI A
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
G + + + + M G +T S +++ L
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVINML 615
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 120/226 (53%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D V TL+ GF G I A + M + P + T + ++GD KLF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M KG P SVTF +I G+C+ + + + M + GC P+ TY LI+ C +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G A + L+ M K G +P++ T+++I++ LC+ GN+ EA K+ + G+ +T Y
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
TLMD Y K+ E+ +A + +EM GKG+ P VTFN+L+ G +G
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 1/230 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D L+ G+ G + +A V + M G P++ T L L + GD S +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L +M + G +P+ T+N ++ G C+ + L+ G + D TY L++AYC
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G+ A + L M+ G +P++ TF+ +M+ C G + + K+ + + GIAPN T
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
+N+L+ Y + A +Y++M +GV PD T+ LV GH K RN
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK-ARN 646
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y D +T++ G+ G + + ++ M+ G++P+ + LL R+
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ F +M+R+G P +V + +I GFC++ + + M PD TY +I+ +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G A + M G EP TF+ +++ C+ G++ +A +V + + G +PN
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y TL+DG K ++ AN L EM G+ P+ T+N +V G K G
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+++ G G I EA+ ++ G+ T L + G+ ++ K+ML
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG +P+ VTFNV++ GFC L GE LL+ M G P+A T+N L+ YCI+
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A M G P T+ ++ C+ N+ EA +F ++ G + + + Y+ L+
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
G++K ++ +A ++++MR +G++ D F+ YK R
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
TL+ G G + A ++LH M +G++P++ + L + G+ KL +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G +VT+ ++ +C+ + + +L M G P T+N+L+N +C+ G
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
LN M+ G P+ TF++++ C N+ A ++ + G+ P+ Y L+
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
G+ KAR + +A L++EM+GKG S T+++L+ G K
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N ++ +G I EA +L M G P + + + + R G+ VWKL + M R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG +P+S + +I CR L E M + G PD Y LI+ +C +G
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + M P + T++ I+ C+ G+++EA K+F + G+ P++ + L++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
GY KA + A ++ M G SP+ VT+ L+ G K G
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A+ V +VGV ++++ I+ + ++G L M KG P ++++ ++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G+CR L L+ +M + G P+++ Y +I C K + A + + M++ G P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
++T++ C+ G++ A K F + I P+ Y ++ G+ + ++ +A L+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYG 236
EM KG+ PD VTF L+ G+ K G
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAG 435
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 120/226 (53%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D V TL+ GF G I A + M + P + T + ++GD KLF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M KG P SVTF +I G+C+ + + + M + GC P+ TY LI+ C +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G A + L+ M K G +P++ T+++I++ LC+ GN+ EA K+ + G+ +T Y
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
TLMD Y K+ E+ +A + +EM GKG+ P VTFN+L+ G +G
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 1/230 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D L+ G+ G + +A V + M G P++ T L L + GD S +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L +M + G +P+ T+N ++ G C+ + L+ G + D TY L++AYC
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G+ A + L M+ G +P++ TF+ +M+ C G + + K+ + + GIAPN T
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
+N+L+ Y + A +Y++M +GV PD T+ LV GH K RN
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK-ARN 646
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y D +T++ G+ G + + ++ M+ G++P+ + LL R+
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ F +M+R+G P +V + +I GFC++ + + M PD TY +I+ +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G A + M G EP TF+ +++ C+ G++ +A +V + + G +PN
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y TL+DG K ++ AN L EM G+ P+ T+N +V G K G
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+++ G G I EA+ ++ G+ T L + G+ ++ K+ML
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG +P+ VTFNV++ GFC L GE LL+ M G P+A T+N L+ YCI+
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A M G P T+ ++ C+ N+ EA +F ++ G + + + Y+ L+
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
G++K ++ +A ++++MR +G++ D F+ YK R
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
TL+ G G + A ++LH M +G++P++ + L + G+ KL +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G +VT+ ++ +C+ + + +L M G P T+N+L+N +C+ G
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
LN M+ G P+ TF++++ C N+ A ++ + G+ P+ Y L+
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
G+ KAR + +A L++EM+GKG S T+++L+ G K
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N ++ +G I EA +L M G P + + + + R G+ VWKL + M R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG +P+S + +I CR L E M + G PD Y LI+ +C +G
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + M P + T++ I+ C+ G+++EA K+F + G+ P++ + L++
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
GY KA + A ++ M G SP+ VT+ L+ G K G
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A+ V +VGV ++++ I+ + ++G L M KG P ++++ ++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G+CR L L+ +M + G P+++ Y +I C K + A + + M++ G P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
++T++ C+ G++ A K F + I P+ Y ++ G+ + ++ +A L+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYG 236
EM KG+ PD VTF L+ G+ K G
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAG 435
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 120/229 (52%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E + NT++ N + +AL++ M + G+RP++ L R L G + +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L DM+ + P+ VTF+ +I F ++ LV E L M K DPD FTY+ LIN +C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + A +M+ C P++ T++T++ C+ V E ++F + G+ NT
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y TL+ G+ +ARE A +++++M GV PD +T++IL+ G G+
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 117/233 (50%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE D LN+L+ GF + I +A+ ++ +M ++G +P L L R
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+ KG +P VT+ +++ G C++ + + SLL M + +P YN +I+A
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C + A++ M G P++ T+++++ LC G +A ++ + + I PN
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++ L+D +VK ++ +A LY+EM + + PD T++ L+ G + R E
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M+++G+ +L +IL R + M++ G P VT N ++ GFC
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ SL+ M + G PD+FT+N LI+ + S A+ ++ M+ GC+P + T+
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+++ LC+ G++ A + +++ I P IYNT++D + + A L+ EM
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
KG+ P+ VT+N L+ YGR
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGR 306
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 111/233 (47%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y+ D NTL+ G EA+ ++ RM G +P L I+ L + GD
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L K M + P V +N +I C + + +L M G P+ TYN LI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G+ S A L+ M++ P++ TFS ++ A +EG ++EA K++D + I P+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y++L++G+ + +A ++E M K P+ VT+N L+ G K R E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 5/234 (2%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
+HN Y + L+ F + AL VL +M +G P + + L
Sbjct: 113 SHNLY-----TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
L M+ G +P S TFN +I G R +L+ M GC PD TY I+
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
+N C +G +A+ L M + EP + ++TI+ ALC NV +A +F + + GI
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
PN YN+L+ A+ L +M + ++P+ VTF+ L+ K G+
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+L+R N G +A +L M + + P++ + L ++ G KL+ +M++
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+ P T++ +I GFC L + + LM C P+ TYN LI +C +
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
M+ M + G + T++T++H + A+ VF ++ G+ P+ Y+ L+D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
G ++ A +++E ++ + PD T+NI++ G K G+
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF DM++ P PS V F+ ++ + + SL M G + +TY+ILIN +C
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC 127
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + S+A+ L MMK G EP + T +++++ C + +A + ++ +MG P++
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+NTL+ G + +A L + M KG PD VT+ I+V G K G
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D ++L+ GF + EA + M P++ L + + +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF++M ++G ++VT+ +I GF + + + + M G PD TY+IL++ C
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK A+ + ++ EP + T++ ++ +C+ G V + +F + G+ PN
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y T+M G+ + +A+ L+ EM+ +G PD T+N L+ H + G
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL++GF + E +++ M G+ + T L + + + +FK M+
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P +T+++++ G C + + + + +PD +TYNI+I C GK
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
D + G +P++ T++T+M CR+G EA +F +++ G P++ YNTL+
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+++ + + L EMR D T ++
Sbjct: 580 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVT 613
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ G N G + AL V ++ + P + I+ + + G W LF
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ KG +P+ VT+ M+ GFCR+ ++L M + G PD+ TYN LI A+
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 131 GKTSVAMDWLNMM 143
G + + + + M
Sbjct: 585 GDKAASAELIREM 597
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 116/222 (52%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y+ D N+++ G +G + EA++VL +M P+ L L +
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+L + + KG P TFN +I G C + V L M GC+PD FTYN+LI++
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C KGK A++ L M +GC S+ T++T++ C+ EA ++FD ++ G++ N+
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
YNTL+DG K+R + A L ++M +G PD T+N L+
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
N + + D NTL+ G G + A++++ M G P + + L ++G+
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
++ M+ + P++VT+N +I C++ + L ++ G PD T+N L
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
I C+ VAM+ M GCEP T++ ++ +LC +G + EA + +++ G
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
A + YNTL+DG+ KA + +A +++EM GVS + VT+N L+ G K R
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 1/231 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D T+M+G++ G + AL + +M + G S ++ ++ + G
Sbjct: 223 DEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 71 KDMLRK-GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
++M + G P TFN ++ G C+ + ++ +M + G DPD +TYN +I+ C
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G+ A++ L+ M+ C P+ T++T++ LC+E V EA ++ + GI P+
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+N+L+ G R A L+EEMR KG PD T+N+L+ G+ E
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 1/224 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D N L+ + G + EAL++L +M G S+ L + +
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+F +M G +SVT+N +I G C+ + + L+ M G PD +TYN L+ +C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G A D + M NGCEP + T+ T++ LC+ G V A K+ IQ GI
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKG-VSPDCVTFNILVGG 231
YN ++ G + R+ +A L+ EM + PD V++ I+ G
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRG 655
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ + EA ++ + G+ P + L + L ++ +LF++M
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P T+N++I C + L ++L M GC TYN LI+ +C KT
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + + M +G + T++T++ LC+ V +A ++ D++ G P+ YN+L+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ + +I +A + + M G PD VT+ L+ G K GR
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 8/228 (3%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRD-VGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
L+ + + E L V+ M D G++P + LL+ V M
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G +P TFNV+I CR L +L MP +G PD T+ ++ Y +G A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM----GIAPNTTIYNT 192
+ M++ GC S + + I+H C+EG V +A + IQ+M G P+ +NT
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA---LNFIQEMSNQDGFFPDQYTFNT 300
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
L++G KA + A + + M +G PD T+N ++ G K G E
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 44 RPSLSAITILFR-LLLRVGDYGS---VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLV 99
+P+ S L+ +LLR+G GS + K+ +DM + TF ++I + + +
Sbjct: 76 KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFE--- 132
Query: 100 VGESLLH----LMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN-GCEPSMAT 154
+ + +L ++ +FG PD YN ++N + G + ++ + M G +P ++T
Sbjct: 133 LQDEILSVVDWMIDEFGLKPDTHFYNRMLN-LLVDGNSLKLVEISHAKMSVWGIKPDVST 191
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
F+ ++ ALCR + A + + + G+ P+ + T+M GY++ ++ A + E+M
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 215 GKGVSPDCVTFNILVGGHYKYGR 237
G S V+ N++V G K GR
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGR 274
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 123/234 (52%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
++ E +S V ++L + F ++ A D +M+D G P++ + LL G
Sbjct: 160 SYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV 219
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+ +++M R P+ T N+++ G+CR L G LL M + G +YN L
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
I +C KG S A+ NMM K+G +P++ TF+T++H CR + EA KVF ++ + +
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
APNT YNTL++GY + + A YE+M G+ D +T+N L+ G K +
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 3/229 (1%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
LN +M G+ G + + +++L M +G R + + L G S KL M
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ G +P+ VTFN +I GFCR L + M P+ TYN LIN Y +G
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+A + M+ NG + + T++ ++ LC++ +A + + + PN++ ++ L
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
+ G + + LY+ M G P+ TFN+LV + RN +++
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA---FCRNEDFD 465
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N M L G + AL MR + P+ + ++ R G +L +DM R
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G R + V++N +I G C + L L ++M K G P+ T+N LI+ +C K
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A M P+ T++T+++ ++G+ A + ++ + GI + YN L+
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
G K + +A +E+ + + P+ TF+ L+ G
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
NTL+ GF + EA V M+ V V P+ L + GD+ ++ ++DM
Sbjct: 310 TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ G + +T+N +I G C+Q + + K P++ T++ LI C++
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ M+++GC P+ TF+ ++ A CR + A +V + I ++ + +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 194 MDGYVKAREIGQANMLYEEMRGK 216
+G + L +EM GK
Sbjct: 490 CNGLKHQGKDQLVKKLLQEMEGK 512
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 96/223 (43%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ G G++ AL + + M G++P++ L R K+F +M
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P++VT+N +I G+ +Q + M G D TYN LI C + KT
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A ++ + K P+ +TFS ++ C N +++ + G PN +N L+
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVS 456
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
+ + + A+ + EM + + D T + + G G++
Sbjct: 457 AFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 123/234 (52%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
++ E +S V ++L + F ++ A D +M+D G P++ + LL G
Sbjct: 160 SYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV 219
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+ +++M R P+ T N+++ G+CR L G LL M + G +YN L
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
I +C KG S A+ NMM K+G +P++ TF+T++H CR + EA KVF ++ + +
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
APNT YNTL++GY + + A YE+M G+ D +T+N L+ G K +
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 3/229 (1%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
LN +M G+ G + + +++L M +G R + + L G S KL M
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ G +P+ VTFN +I GFCR L + M P+ TYN LIN Y +G
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+A + M+ NG + + T++ ++ LC++ +A + + + PN++ ++ L
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
+ G + + LY+ M G P+ TFN+LV + RN +++
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA---FCRNEDFD 465
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N M L G + AL MR + P+ + ++ R G +L +DM R
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G R + V++N +I G C + L L ++M K G P+ T+N LI+ +C K
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A M P+ T++T+++ ++G+ A + ++ + GI + YN L+
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
G K + +A +E+ + + P+ TF+ L+ G
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
NTL+ GF + EA V M+ V V P+ L + GD+ ++ ++DM
Sbjct: 310 TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ G + +T+N +I G C+Q + + K P++ T++ LI C++
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ M+++GC P+ TF+ ++ A CR + A +V + I ++ + +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 194 MDGYVKAREIGQANMLYEEMRGK 216
+G + L +EM GK
Sbjct: 490 CNGLKHQGKDQLVKKLLQEMEGK 512
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 96/223 (43%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ G G++ AL + + M G++P++ L R K+F +M
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P++VT+N +I G+ +Q + M G D TYN LI C + KT
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A ++ + K P+ +TFS ++ C N +++ + G PN +N L+
Sbjct: 397 AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVS 456
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
+ + + A+ + EM + + D T + + G G++
Sbjct: 457 AFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKD 499
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 120/230 (52%), Gaps = 1/230 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGV-RPSLSAITILFRLLLRVGDYGSVW 67
E D NTL++GF + +A ++ ++ V P + T + + G
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L DMLR G P++VTFNV++ G+ + ++ E + M FGC PD T+ LI+ Y
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G+ S M G P+ T+S +++ALC E +++AR++ ++ I P
Sbjct: 358 CRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+YN ++DG+ KA ++ +AN++ EEM K PD +TF IL+ GH GR
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGR 467
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+L L+ F G + A +L ++ V + L L+++ KLF +
Sbjct: 140 LLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEH 197
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
LR + TFN++I G C LL +M FGC+PD TYN LI +C +
Sbjct: 198 LRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNEL 257
Query: 134 SVAMDWLNMMMKNG--CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
+ A + +K+G C P + T+++++ C+ G + EA + D + +GI P +N
Sbjct: 258 NKASEMFK-DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFN 316
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVS----PDCVTFNILVGGHYKYGR 237
L+DGY KA E+ A EE+RGK +S PD VTF L+ G+ + G+
Sbjct: 317 VLVDGYAKAGEMLTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D +L+ G+ VG + + + M G+ P+ +IL L +L
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ K P +N +I GFC+ + ++ M K C PD T+ ILI +C+K
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEA 171
G+ A+ + M+ GC P T S+++ L + G EA
Sbjct: 466 GRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 120/230 (52%), Gaps = 1/230 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGV-RPSLSAITILFRLLLRVGDYGSVW 67
E D NTL++GF + +A ++ ++ V P + T + + G
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L DMLR G P++VTFNV++ G+ + ++ E + M FGC PD T+ LI+ Y
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G+ S M G P+ T+S +++ALC E +++AR++ ++ I P
Sbjct: 358 CRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+YN ++DG+ KA ++ +AN++ EEM K PD +TF IL+ GH GR
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGR 467
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+L L+ F G + A +L ++ V + L L+++ KLF +
Sbjct: 140 LLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEH 197
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
LR + TFN++I G C LL +M FGC+PD TYN LI +C +
Sbjct: 198 LRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNEL 257
Query: 134 SVAMDWLNMMMKNG--CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
+ A + +K+G C P + T+++++ C+ G + EA + D + +GI P +N
Sbjct: 258 NKASEMFK-DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFN 316
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVS----PDCVTFNILVGGHYKYGR 237
L+DGY KA E+ A EE+RGK +S PD VTF L+ G+ + G+
Sbjct: 317 VLVDGYAKAGEMLTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D +L+ G+ VG + + + M G+ P+ +IL L +L
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ K P +N +I GFC+ + ++ M K C PD T+ ILI +C+K
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEA 171
G+ A+ + M+ GC P T S+++ L + G EA
Sbjct: 466 GRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 122/220 (55%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NT++RG GM+ A +++ + G P + + IL R LL G + KL
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M + P+ VT++++I CR + +LL LM + G PDA++Y+ LI A+C +
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ VA+++L M+ +GC P + ++T++ LC+ G +A ++F ++ ++G +PN++ Y
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
NT+ + + +A + EM G+ PD +T+N ++
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 111/231 (48%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
++ D N ++ + G + AL VL+++ +P++ TIL + G
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
KL +ML +G +P T+N +I G C++ + ++ + GC+PD +YNIL+ A
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRA 307
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
+GK + M C+P++ T+S ++ LCR+G + EA + +++ G+ P+
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y+ L+ + + + A E M G PD V +N ++ K G+
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D N L+R LN G E ++ +M P++ +IL L R G
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L K M KG P + +++ +I FCR+ L V L M GC PD YN ++ C
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 414
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK A++ + + GC P+ ++++T+ AL G+ I A + + GI P+
Sbjct: 415 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEI 474
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YN+++ + + +A L +MR P VT+NI++ G K R
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G E+L +L M G P + T L + + + ++ ++L K +P +
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAY 161
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
N +I GFC+ + +L M PD TYNI+I + C +GK +A+ LN ++
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
+ C+P++ T++ ++ A EG V EA K+ D + G+ P+ YNT++ G K + +
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
A + + KG PD +++NIL+ G+
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D N L+ GF + I +A VL RMR P I+ L G K
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ +L +P+ +T+ ++I + G+ L+ M G PD FTYN +I C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+G A + + + GCEP + +++ ++ AL +G E K+ ++ PN
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y+ L+ + +I +A L + M+ KG++PD +++ L+ + GR
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NT++ G +AL++ ++ +VG P+ S+ +F L GD + +M+
Sbjct: 407 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS 466
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCD--PDAFTYNILINAYCIKGKT 133
G P +T+N MI CR+ +V E+ L+ C+ P TYNI++ +C +
Sbjct: 467 NGIDPDEITYNSMISCLCREG--MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV 174
A++ L M+ NGC P+ T++ ++ + G EA ++
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
S NT+ + G AL ++ M G+ P + L R G ++L D
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
M PS VT+N+++ GFC+ + ++L M GC P+ TY +LI G
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGY 558
Query: 133 TSVAMDWLNMMMK 145
+ AM+ N +++
Sbjct: 559 RAEAMELANDLVR 571
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 123/226 (54%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+L+ G+ G++ AL+VLH MR+ G +P++ + TIL ++G + +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M G +P++V FN +I FC++ + + MP+ GC PD +T+N LI+ C
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ A+ L M+ G + T++T+++A R G + EARK+ + + G + Y
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N+L+ G +A E+ +A L+E+M G +P ++ NIL+ G + G
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRM-RDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ + + NTL+ GF+ G + +A VL M G+ P + L + G G
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++ DM KG +P+ ++ +++ GFC+ + ++L+ M G P+ +N LI+A+
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C + + A++ M + GC+P + TF++++ LC + A + + G+ NT
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YNTL++ +++ EI +A L EM +G D +T+N L+ G + G
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D N+L+ G V I AL +L M GV + L LR G+ K
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L +M+ +G +T+N +I G CR + SL M + G P + NILIN C
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G A+++ M+ G P + TF+++++ LCR G + + +F ++Q GI P+T
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+NTLM K + A +L +E G P+ T++IL+
Sbjct: 671 TFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+M+ F V I AL +L M G P+ L L + +L ++M
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G P + TFN +I G C+ + +++ M G PD TY L+N C G+ A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF-DRIQDMGIAPNTTIYNTLMD 195
D + K P + F+T++H G + +A+ V D + GI P+ YN+L+
Sbjct: 342 KDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
GY K +G A + +MR KG P+ ++ ILV G K G+ E
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 5/226 (2%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
S+ ++MR + G + ++ MR+V P+ + ++ +L+ + +F
Sbjct: 147 SLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY 206
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
DML + P+ TF V++ FC + SLL M K GC P++ Y LI++
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
+ + A+ L M GC P TF+ ++ LC+ + EA K+ +R+ G AP+ Y
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
LM+G K + A L+ + P+ V FN L+ G +GR
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGR 368
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 7/242 (2%)
Query: 1 MWQNHNEY--ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLL 58
M + N Y E F N ++ ++ A +V + M + P+L ++ +
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
V + S L +DM + G P+SV + +I + + LL M GC PDA
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
T+N +I C + + A +N M+ G P T+ +M+ LC+ G V A+ +F RI
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM-RGKGVSPDCVTFNILVGGHYKYGR 237
P I+NTL+ G+V + A + +M G+ PD T+N L+ G++K G
Sbjct: 349 P----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 238 NG 239
G
Sbjct: 405 VG 406
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ FL G I EA +++ M G L + L R G+ LF+ MLR
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G PS+++ N++I G CR + M G PD T+N LIN C G+
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
+ + G P TF+T+M LC+ G V +A + D + G PN ++ L+
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Query: 196 GYVKAREIGQ 205
+ + +
Sbjct: 713 SIIPQETLDR 722
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 5/228 (2%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ TL+ + EAL +L M +G P + L + K+ M
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L +G P +T+ ++ G C+ + + L + +PK P+ +N LI+ + G+
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRL 369
Query: 134 SVAMDWL-NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
A L +M+ G P + T++++++ +EG V A +V +++ G PN Y
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
L+DG+ K +I +A + EM G+ P+ V FN L+ K R E
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 16/188 (8%)
Query: 55 RLLLRVGDYGSVWK--LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG 112
RLL+++ D G V+K LF ++R + GF Q + +L + +
Sbjct: 132 RLLIQMKDEGIVFKESLFISIMRDYDK----------AGFPGQTTRL----MLEMRNVYS 177
Query: 113 CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEAR 172
C+P +YN+++ VA + M+ P++ TF +M A C + A
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 173 KVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+ + G PN+ IY TL+ K + +A L EEM G PD TFN ++ G
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 233 YKYGRNGE 240
K+ R E
Sbjct: 298 CKFDRINE 305
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 123/229 (53%), Gaps = 1/229 (0%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V + LM + GMI +++ V ++R G++P L A T+L L++ +VWK+FK M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
++ G + +NV++ + E LL M + G PD FTYN LI+ YC K
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A+ + M ++G P++ T+++ +H REG + EA ++F I+D + N Y TL
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTL 313
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
+DGY + +I +A L E M +G SP VT+N ++ + GR E N
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREAN 362
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 1/230 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL+ + M FEAL V RM GV P++ R G +LF
Sbjct: 237 DIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF 296
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++ ++ + VT+ +I G+CR + L +M G P TYN ++ C
Sbjct: 297 RE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCED 355
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ A L M EP T +T+++A C+ +++ A KV ++ + G+ + Y
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSY 415
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
L+ G+ K E+ A M KG SP T++ LV G Y + E
Sbjct: 416 KALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDE 465
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
TL+ G+ + I EAL + M G P + + R L G +L +M
Sbjct: 311 TTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG 370
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
K P ++T N +I +C+ + +V + M + G D ++Y LI+ +C +
Sbjct: 371 KKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELEN 430
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + L M++ G P AT+S ++ + E K+ + + G+ + +Y L+
Sbjct: 431 AKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIR 490
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
K ++ A +L+E M KG+ D V F + +++ G+ E
Sbjct: 491 RICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTE 535
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 1/225 (0%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
++ V N L+ G +A +L M + GV P + L + + + +
Sbjct: 201 ANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSV 260
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
M R G P+ VT+N I GF R +G + + L K + TY LI+ YC
Sbjct: 261 QDRMERSGVAPNIVTYNSFIHGFSR-EGRMREATRLFREIKDDVTANHVTYTTLIDGYCR 319
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
A+ +M G P + T+++I+ LC +G + EA ++ + I P+
Sbjct: 320 MNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNIT 379
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
NTL++ Y K ++ A + ++M G+ D ++ L+ G K
Sbjct: 380 CNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCK 424
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+++R G I EA +L M + P L ++ D S K+ K M+
Sbjct: 346 NSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIE 405
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G + ++ +I GFC+ L + L M + G P TY+ L++ + + K
Sbjct: 406 SGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDE 465
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
L K G +A + ++ +C+ V A+ +F+ ++ G+ ++ I+ T+
Sbjct: 466 ITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAY 525
Query: 196 GYVKAREIGQANMLYEEM 213
Y + ++ +A+ L++ M
Sbjct: 526 AYWRTGKVTEASALFDVM 543
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 76/189 (40%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D NTL+ + + + A+ V +M + G++ + + L +V + + +
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKE 433
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
M+ KG P T++ ++ GF Q LL K G D Y LI C
Sbjct: 434 ELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRIC 493
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ A M K G F+T+ +A R G V EA +FD + + + N
Sbjct: 494 KLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLK 553
Query: 189 IYNTLMDGY 197
+Y ++ Y
Sbjct: 554 LYKSISASY 562
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 116/208 (55%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+AL++ M + GVRP++ + L L G + +L DM+ + P+ VTF+ +I
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
F ++ LV E L M K DP+ FTY+ LIN +C+ + A L +M++ C
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P++ T++T+++ C+ V + ++F + G+ NT Y TL+ G+ +AR+ A M+
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+++M GV P+ +T+NIL+ G K G+
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGK 478
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 115/222 (51%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
++L+ N G +A +L M + + P+L + L ++ G KL+++M++
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+ P+ T++ +I GFC L + +L LM + C P+ TYN LIN +C +
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
M+ M + G + T++T++H + + A+ VF ++ +G+ PN YN L+D
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
G K ++ +A +++E ++ + PD T+NI++ G K G+
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 115/233 (49%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE D LN+L+ GF + I +A+ ++ +M ++G +P T L L
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+++G +P VT+ ++ G C++ + +LL+ M + + Y+ +I++
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C A++ M G P++ T+S+++ LC G +A ++ + + I PN
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++ L+D +VK ++ +A LYEEM + + P+ T++ L+ G R GE
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M +G+ +L IL R L M++ G P VT N ++ GFC
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ +L+ M + G PD T+ LI+ + K S A+ ++ M++ GC+P + T+
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+++ LC+ G+ A + ++++ I N IY+T++D K R A L+ EM
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
KGV P+ +T++ L+ YGR
Sbjct: 282 KGVRPNVITYSSLISCLCNYGR 303
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 110/226 (48%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D ++ G G AL++L++M + ++ + + L +
Sbjct: 215 QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 274
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF +M KG RP+ +T++ +I C LL M + +P+ T++ LI+A+
Sbjct: 275 LFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFV 334
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
KGK A M+K +P++ T+S++++ C + EA+++ + + PN
Sbjct: 335 KKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
YNTL++G+ KA+ + + L+ EM +G+ + VT+ L+ G ++
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Query: 54 FRLLLRVG----DYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMP 109
+R +LR G + LF M + P PS + F+ ++ + + S M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 110 KFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVI 169
G + +TYNILIN +C + S+A+ L MMK G EP + T +++++ C +
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 170 EARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+A + D++ +MG P+T + TL+ G + +A L + M +G PD VT+ +V
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 230 GGHYKYG 236
G K G
Sbjct: 226 NGLCKRG 232
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 119/229 (51%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E+D + +T++ + +AL++ M + G+RP + + L L G + +
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L DML + P+ VTFN +I F ++ L+ E L M + DP+ TYN LIN +C
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + A +M+ C P + T++T+++ C+ V++ ++F + G+ NT
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y TL+ G+ +A + A M++++M GV P+ +T+N L+ G K G+
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 111/227 (48%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D ++L+ N G +A +L M + + P++ L + G KLF
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M+++ P+ VT+N +I GFC L + + LM C PD TYN LIN +C
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K M+ M + G + T++T++H + + A+ VF ++ G+ PN Y
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
NTL+DG K ++ +A +++E ++ + PD T+NI+ G K G+
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 35/262 (13%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y LN+L+ GF + I EA+ ++ +M ++G +P T L L +
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK----------------- 110
L + M+ KG +P VT+ +I G C++ + +LL+ M K
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 111 ------------------FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSM 152
G PD FTY+ LI+ C G+ S A L+ M++ P++
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
TF++++ A +EG +IEA K+FD + I PN YN+L++G+ + +A ++
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 213 MRGKGVSPDCVTFNILVGGHYK 234
M K PD VT+N L+ G K
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCK 392
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M +GV +L I+ L R + M++ G PS VT N ++ GFC
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ +L+ M + G PD T+ L++ K S A+ + M+ GC+P + T+
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+++ LC+ G A + ++++ I + IY+T++D K R + A L+ EM
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
KG+ PD T++ L+ YGR
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGR 290
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
N+L+ F G + EA + M + P++ L ++F M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ K P VT+N +I GFC+ + +V G L M + G + TY LI+ +
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A M+ +G P++ T++T++ LC+ G + +A VF+ +Q + P+ YN +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+G KA ++ L+ + KGV PD + +N ++ G K G E
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF +M++ P PS V F+ ++ + + + S M G + +TYNI+IN C
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + S A+ L MMK G PS+ T +++++ C + EA + D++ +MG P+T
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ TL+ G + + +A L E M KG PD VT+ ++ G K G
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+L+ GF + EA + M P + L + +LF+DM R
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G ++VT+ +I GF + + + M G P+ TYN L++ C GK
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
AM + K+ EP + T++ + +C+ G V + +F + G+ P+ YNT++
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
G+ K +A L+ +M+ G PD T+N L+ H + G
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL+ GF + + +++ M G+ + T L + D + +F
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K M+ G P+ +T+N ++ G C+ L + + K +PD +TYNI+ C
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK D + G +P + ++T++ C++G EA +F ++++ G P++ Y
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
NTL+ +++ + + L +EMR + D T+ ++
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVT 597
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
TL+ GF A V +M GV P++ L L + G +F+ + +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P T+N+M G C+ + G L + G PD YN +I+ +C KG
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A M ++G P T++T++ A R+G+ + ++ ++ A + + Y + D
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 112/208 (53%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+AL++ M + GVRP++ + L L + +L DM+ + P+ VTFN +I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
F ++ LV E L M K DPD FTY+ LIN +C+ + A +M+ C
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P++ T++T+++ C+ + E ++F + G+ NT Y TL+ G+ +AR+ A M+
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+++M GV P+ +T+N L+ G K G+
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M+ +G+ +L IL R L M++ G PS VT + ++ G+C
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ + +L+ M + G PD T+ LI+ + K S A+ ++ M++ GC+P++ T+
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+++ LC+ G++ A + ++++ I N IY+T++D K R A L+ EM
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
KGV P+ +T++ L+ Y R
Sbjct: 289 KGVRPNVITYSSLISCLCNYER 310
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 116/233 (49%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE L++L+ G+ + I +A+ ++ +M ++G RP T L L
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+++G +P+ VT+ V++ G C++ + + +LL+ M + + Y+ +I++
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C A++ M G P++ T+S+++ LC +A ++ + + I PN
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+N L+D +VK ++ +A LY+EM + + PD T++ L+ G + R E
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A +L M + + P++ L ++ G KL+ +M+++ P T++ +I
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
GFC L + + LM C P+ TYN LIN +C + ++ M + G
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
+ T++T++H + + A+ VF ++ G+ PN YNTL+DG K ++ +A ++
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+E ++ + P T+NI++ G K G+
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 109/218 (50%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
++ G G I A ++L++M + ++ + + L + LF +M K
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G RP+ +T++ +I C + LL M + +P+ T+N LI+A+ +GK A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ M+K +P + T+S++++ C + EA+ +F+ + PN YNTL++G
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+ KA+ I + L+ EM +G+ + VT+ L+ G ++
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 90/168 (53%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF M++ P PS FN ++ + + + SL M + G + +TYNILIN +C
Sbjct: 72 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + S+A+ L MMK G EPS+ T S++++ C + +A + D++ +MG P+T
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ TL+ G + +A L + M +G P+ VT+ ++V G K G
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 101/216 (46%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D ++L+ GF + EA + M P++ L + +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF++M ++G ++VT+ +I GF + + + + M G P+ TYN L++ C
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK AM + ++ EP++ T++ ++ +C+ G V + +F + G+ P+
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVT 224
IYNT++ G+ + +A+ L+ +MR G PD T
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 111/222 (50%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+ L+ G VG + EA + +M + G +PS T+L + L G + LF +M+
Sbjct: 270 SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP 329
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G +P+ T+ V+I G CR + + M K P TYN LIN YC G+
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP 389
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + L +M K C+P++ TF+ +M LCR G +A + R+ D G++P+ YN L+D
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
G + + A L M + PDC+TF ++ K G+
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 35/260 (13%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G+ G + A ++L M +P++ L L RVG L K ML
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P V++NV+I G CR+ + LL M F +PD T+ +INA+C +GK V
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREG------------------------NVI-- 169
A +L +M++ G T +T++ +C+ G NVI
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 170 ---------EARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
E + +I +G+ P+ Y TL+DG +++ +I + + E M+ G P
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 221 DCVTFNILVGGHYKYGRNGE 240
+ + I++ G ++GR E
Sbjct: 615 NVYPYTIIINGLCQFGRVEE 634
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
L++ + G+I +A ++ M G +P++ T+L L R G + + M++
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
PS +T+N +I G+C+ +V LL +M K C P+ T+N L+ C GK
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ L M+ NG P + +++ ++ LCREG++ A K+ + I P+ + +++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
+ K + A+ M KG+S D VT L+ G K G+
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 113/227 (49%), Gaps = 1/227 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRM-RDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
D + +L+ GF + +AL V M ++V P+ + +IL L VG + L
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL 288
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
M KG +PS+ T+ V+I C + + +L M GC P+ TY +LI+ C
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR 348
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
GK A M+K+ PS+ T++ +++ C++G V+ A ++ ++ PN
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+N LM+G + + +A L + M G+SPD V++N+L+ G + G
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%)
Query: 80 PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDW 139
P+SV+++++I G C L L M + GC P TY +LI A C +G A +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 140 LNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVK 199
+ M+ GC+P++ T++ ++ LCR+G + EA V ++ I P+ YN L++GY K
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 200 AREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ A L M + P+ TFN L+ G + G+
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 88 MICGFCRQQGLVVGESLLHLMPK-FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN 146
++ GFCR L + +M K C P++ +Y+ILI+ C G+ A + M +
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 147 GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQA 206
GC+PS T++ ++ ALC G + +A +FD + G PN Y L+DG + +I +A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 207 NMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
N + +M + P +T+N L+ G+ K GR
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 100/261 (38%), Gaps = 70/261 (26%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM-- 73
N LM G VG ++A+ +L RM D G+ P + + +L L R G + +KL M
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC 469
Query: 74 ---------------------------------LRKGPRPSSVTFNVMICGFCR------ 94
LRKG VT +I G C+
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRD 529
Query: 95 ---------------------------QQGLVVGESLLHL--MPKFGCDPDAFTYNILIN 125
+G V E L L + K G P TY L++
Sbjct: 530 ALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVD 589
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
G + + L +M +GC P++ ++ I++ LC+ G V EA K+ +QD G++P
Sbjct: 590 GLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649
Query: 186 NTTIYNTLMDGYVKAREIGQA 206
N Y ++ GYV ++ +A
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRA 670
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
TL+ G VG +AL +L + + + + ++ ++ +L + + + +
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G PS VT+ ++ G R + +L LM GC P+ + Y I+IN C G+
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A L+ M +G P+ T++ ++ G + A + + + G N IY++L+
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694
Query: 196 GYVKARE 202
G+V +++
Sbjct: 695 GFVLSQK 701
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 83 VTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNM 142
+ + ++ C+ E + + K G D+ L+ +C A+ ++
Sbjct: 196 IDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDV 255
Query: 143 MMKN-GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAR 201
M K C P+ ++S ++H LC G + EA + D++ + G P+T Y L+
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 202 EIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
I +A L++EM +G P+ T+ +L+ G + G+ E N
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 120/231 (51%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
S+ SV + L+R +L GMI ++L++ M G PS+ + +++ G+ SVW
Sbjct: 161 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
K+ML++ P TFN++I C + L+ M K G P TYN +++ YC
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
KG+ A++ L+ M G + + T++ ++H LCR + + + ++ I PN
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
YNTL++G+ ++ A+ L EM G+SP+ VTFN L+ GH G E
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y NT++ + G A+++L M+ GV + +L L R +
Sbjct: 264 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 323
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L +DM ++ P+ VT+N +I GF + +++ LL+ M FG P+ T+N LI+ +
Sbjct: 324 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+G A+ MM G PS ++ ++ LC+ AR + R++ G+
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y ++DG K + +A +L EM G+ PD VT++ L+ G K GR
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ GF N G + A +L+ M G+ P+ L + G++ K+F M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG PS V++ V++ G C+ + M + G TY +I+ C G
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ LN M K+G +P + T+S +++ C+ G A+++ RI +G++PN IY+TL+
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ + +A +YE M +G + D TFN+LV K G+ E
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D + L+ GF VG A +++ R+ VG+ P+ + L R+G +
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 534
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+++ M+ +G TFNV++ C+ + E + M G P+ +++ LIN Y
Sbjct: 535 IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 594
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G+ A + M K G P+ T+ +++ LC+ G++ EA K + + A +T
Sbjct: 595 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 654
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
+YNTL+ K+ + +A L+ EM + + PD T+ L+ G + G+
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 704
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + N L+ G ++ ++ +M G P++ + + G + + +L
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M KG T+N++I CR + G LL M K P+ TYN LIN + +
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 351
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK +A LN M+ G P+ TF+ ++ EGN EA K+F ++ G+ P+ Y
Sbjct: 352 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 411
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
L+DG K E A Y M+ GV +T+ ++ G K G
Sbjct: 412 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 1/236 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D N L+ G + EA + + M G+ P+ + L G+ +
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 603
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+F +M + G P+ T+ ++ G C+ L E L + D YN L+ A
Sbjct: 604 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG-IAPN 186
C G + A+ M++ P T+++++ LCR+G + A + G + PN
Sbjct: 664 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
+Y +DG KA + E+M G +PD VT N ++ G+ + G+ + N
Sbjct: 724 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D N ++ G+ +G I + D+L M + P+L+ IL + D + +
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L++ ++ G P +T + ++ G C L +G +L G + D +T+N+LI+
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 874
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G+ + A D + +M G T ++ L R E+R V + GI+P +
Sbjct: 875 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y L++G + +I A ++ EEM + P V + +V K G+ E
Sbjct: 935 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 987
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 10/228 (4%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D N L+ G I A D++ M +G+ + +L R +
Sbjct: 861 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 920
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCR----QQGLVVGESLL-HLMPKFGCDPDAFTYNIL 123
+ +M ++G P S + +I G CR + VV E ++ H + C P+ + +
Sbjct: 921 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI----CPPNV-AESAM 975
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
+ A GK A L M+K P++A+F+T+MH C+ GNVIEA ++ + + G+
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ YN L+ G ++ A LYEEM+G G + T+ L+ G
Sbjct: 1036 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 98/253 (38%), Gaps = 36/253 (14%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
+ L+ G+ N G +A V M VG P+ L + L + G K K +
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
+V +N ++ C+ L SL M + PD++TY LI+ C KGKT
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Query: 135 VAM------------------------------DW-----LNMMMKN-GCEPSMATFSTI 158
+A+ W M N G P + T + +
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ R G + + + + + PN T YN L+ GY K +++ + +LY + G+
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825
Query: 219 SPDCVTFNILVGG 231
PD +T + LV G
Sbjct: 826 LPDKLTCHSLVLG 838
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 2/217 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
++L+ G M+ L +L GV +L G+ + L K M
Sbjct: 833 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G T + M+ R +LH M K G P++ Y LIN C G
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 136 AMDWLNMMMKNG-CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A M+ + C P++A S ++ AL + G EA + + M + P + TLM
Sbjct: 953 AFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
K + +A L M G+ D V++N+L+ G
Sbjct: 1012 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITG 1048
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ G VG I A V M + P A + + R L + G L + ML+
Sbjct: 940 LINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 999
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P+ +F ++ C+ ++ L +M G D +YN+LI C KG ++A
Sbjct: 1000 LVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAF 1059
Query: 138 DWLNMMMKNGCEPSMATFSTIMHAL 162
+ M +G + T+ ++ L
Sbjct: 1060 ELYEEMKGDGFLANATTYKALIRGL 1084
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 122/230 (53%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE D +++L+ GF +F+A+D++ +M ++G RP + + ++G
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+LF M R G R +VT+N ++ G C L+ M P+ T+ +I+ +
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+GK S AM M + +P + T++++++ LC G V EA+++ D + G P+
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YNTL++G+ K++ + + L+ EM +G+ D +T+N ++ G+++ GR
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 3/224 (1%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D + NT++ G +G++ +A+++ RM GVR L L G +
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+L +DM+ + P+ +TF +I F ++ L M + DPD FTYN LIN
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C+ G+ A L++M+ GC P + T++T+++ C+ V E K+F + G+ +T
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
YNT++ GY +A A ++ M + P+ T++IL+ G
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYG 390
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 90/169 (53%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF M++ P PS V F+ ++ + + + SL H M G D ++YNI+IN C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ +A+ + MMK G EP + T S++++ C+ V +A + ++++MG P+
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
IYNT++DG K + A L++ M GV D VT+N LV G GR
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
+ + H M G+ L + I+ L R + + M++ G P VT + +I
Sbjct: 88 VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
GFC+ + L+ M + G PD YN +I+ C G + A++ + M ++G
Sbjct: 148 GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRA 207
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
T+++++ LC G +A ++ + I PN + ++D +VK + +A LY
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
EEM + V PD T+N L+ G +GR E
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 103/212 (48%), Gaps = 3/212 (1%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D N+L+ G G + EA +L M G P + L + K
Sbjct: 276 DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 335
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF++M ++G ++T+N +I G+ Q G ++ + + P+ TY+IL+ C
Sbjct: 336 LFREMAQRGLVGDTITYNTIIQGYF-QAGR--PDAAQEIFSRMDSRPNIRTYSILLYGLC 392
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + A+ M K+ E + T++ ++H +C+ GNV +A +F + G+ P+
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
Y T++ G+ + R+ ++++LY +M+ G+ P
Sbjct: 453 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 116/216 (53%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+ ++ G G I EAL + ++M+ G+ P L A +I+ L ++G + L+ +M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
K P+S T ++ G C++ L+ SLL + G D YNI+I+ Y G
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A++ ++++ G PS+ATF+++++ C+ N+ EARK+ D I+ G+AP+ Y TLMD
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
Y + L EM+ +G+ P VT++++ G
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
N + E D N L +GF +GMI A +V+ M D G+ P + TIL ++G+
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 64 GSVWKLFKDMLRKGPRPSSVT-FNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
L KDML +G +S+ +VM+ G C+ + SL + M G PD Y+I
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
+I+ C GK +A+ + M P+ T ++ LC++G ++EAR + D + G
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+ +YN ++DGY K+ I +A L++ + G++P TFN L+ G+ K
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 1/222 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G VG I EAL++ M GV P IL + +G W++ +DML
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFT-YNILINAYCIKGKTS 134
KG P +T+ +++CG C+ + +G LL M G + ++ +++++ C G+
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A+ N M +G P + +S ++H LC+ G A ++D + D I PN+ + L+
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
G + + +A L + + G + D V +NI++ G+ K G
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 482
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 12/232 (5%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
L+ G GM+ EA +L + G + I+ + G +LFK ++
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G PS TFN +I G+C+ Q + +L ++ +G P +Y L++AY G T
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCR-----EGNVIEARKVFDR----IQDM---GIA 184
+ M G P+ T+S I LCR N + ++F++ ++DM GI
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
P+ YNT++ + + + A + E M+ + + T+NIL+ YG
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 3/200 (1%)
Query: 39 RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGL 98
+D+G PS+ + + ++G F +L+ G PS + N++I G C +
Sbjct: 216 KDIG--PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 99 VVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
L M K G +PD+ TYNIL + + G S A + + M+ G P + T++ +
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTI-YNTLMDGYVKAREIGQANMLYEEMRGKG 217
+ C+ GN+ + + G N+ I + ++ G K I +A L+ +M+ G
Sbjct: 334 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 393
Query: 218 VSPDCVTFNILVGGHYKYGR 237
+SPD V ++I++ G K G+
Sbjct: 394 LSPDLVAYSIVIHGLCKLGK 413
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
+ N+L+ G+ I EA +L ++ G+ PS+ + T L G+ S+ +L ++
Sbjct: 504 ATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRRE 563
Query: 73 MLRKGPRPSSVTFNVMICGFCR-----QQGLVVGESL-------LHLMPKFGCDPDAFTY 120
M +G P++VT++V+ G CR V+ E + L M G PD TY
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITY 623
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
N +I C S A +L +M + S AT++ ++ +LC G + +A +Q+
Sbjct: 624 NTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE 683
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
++ + Y TL+ + + A L+ ++ +G
Sbjct: 684 QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 114 DPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
D + TY+ +++ C + K A+ +L PS+ +F++IM C+ G V A+
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 174 VFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
F + G+ P+ +N L++G I +A L +M GV PD VT+NIL G +
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 234 KYGR-NGEWN 242
G +G W
Sbjct: 304 LLGMISGAWE 313
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 16 NTLMRGFLNVGMIFEALDVLHR-MRDVGVRPSLSAITILFRLL------------LRVGD 62
TLM + N G +++D L R M+ G+ P+ +++F+ L LR
Sbjct: 542 TTLMDAYANCGNT-KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
+ + +DM +G P +T+N +I CR + L L +M D + TYNI
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNI 660
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
LI++ C+ G A ++ + + S ++T++ A C +G+ A K+F ++ G
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Query: 183 IAPNTTIYNTLMD 195
+ Y+ +++
Sbjct: 721 FNVSIRDYSAVIN 733
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 57/130 (43%)
Query: 35 LHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCR 94
L M G+ P + + L RV + + M + SS T+N++I C
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 95 QQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMAT 154
+ +S ++ + + F Y LI A+C+KG +A+ + ++ G S+
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 155 FSTIMHALCR 164
+S +++ LCR
Sbjct: 728 YSAVINRLCR 737
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 116/216 (53%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+ ++ G G I EAL + ++M+ G+ P L A +I+ L ++G + L+ +M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
K P+S T ++ G C++ L+ SLL + G D YNI+I+ Y G
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A++ ++++ G PS+ATF+++++ C+ N+ EARK+ D I+ G+AP+ Y TLMD
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
Y + L EM+ +G+ P VT++++ G
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
N + E D N L +GF +GMI A +V+ M D G+ P + TIL ++G+
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 64 GSVWKLFKDMLRKGPRPSSVT-FNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
L KDML +G +S+ +VM+ G C+ + SL + M G PD Y+I
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
+I+ C GK +A+ + M P+ T ++ LC++G ++EAR + D + G
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+ +YN ++DGY K+ I +A L++ + G++P TFN L+ G+ K
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 1/222 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G VG I EAL++ M GV P IL + +G W++ +DML
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFT-YNILINAYCIKGKTS 134
KG P +T+ +++CG C+ + +G LL M G + ++ +++++ C G+
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A+ N M +G P + +S ++H LC+ G A ++D + D I PN+ + L+
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
G + + +A L + + G + D V +NI++ G+ K G
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 482
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 12/232 (5%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
L+ G GM+ EA +L + G + I+ + G +LFK ++
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G PS TFN +I G+C+ Q + +L ++ +G P +Y L++AY G T
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCR-----EGNVIEARKVFDR----IQDM---GIA 184
+ M G P+ T+S I LCR N + ++F++ ++DM GI
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
P+ YNT++ + + + A + E M+ + + T+NIL+ YG
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 3/200 (1%)
Query: 39 RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGL 98
+D+G PS+ + + ++G F +L+ G PS + N++I G C +
Sbjct: 216 KDIG--PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 99 VVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
L M K G +PD+ TYNIL + + G S A + + M+ G P + T++ +
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTI-YNTLMDGYVKAREIGQANMLYEEMRGKG 217
+ C+ GN+ + + G N+ I + ++ G K I +A L+ +M+ G
Sbjct: 334 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 393
Query: 218 VSPDCVTFNILVGGHYKYGR 237
+SPD V ++I++ G K G+
Sbjct: 394 LSPDLVAYSIVIHGLCKLGK 413
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
+ N+L+ G+ I EA +L ++ G+ PS+ + T L G+ S+ +L ++
Sbjct: 504 ATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRRE 563
Query: 73 MLRKGPRPSSVTFNVMICGFCR-----QQGLVVGESL-------LHLMPKFGCDPDAFTY 120
M +G P++VT++V+ G CR V+ E + L M G PD TY
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITY 623
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
N +I C S A +L +M + S AT++ ++ +LC G + +A +Q+
Sbjct: 624 NTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE 683
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
++ + Y TL+ + + A L+ ++ +G
Sbjct: 684 QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 114 DPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
D + TY+ +++ C + K A+ +L PS+ +F++IM C+ G V A+
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 174 VFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
F + G+ P+ +N L++G I +A L +M GV PD VT+NIL G +
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 234 KYGR-NGEWN 242
G +G W
Sbjct: 304 LLGMISGAWE 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 16 NTLMRGFLNVGMIFEALDVLHR-MRDVGVRPSLSAITILFRLL------------LRVGD 62
TLM + N G +++D L R M+ G+ P+ +++F+ L LR
Sbjct: 542 TTLMDAYANCGNT-KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
+ + +DM +G P +T+N +I CR + L L +M D + TYNI
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNI 660
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
LI++ C+ G A ++ + + S ++T++ A C +G+ A K+F ++ G
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Query: 183 IAPNTTIYNTLMD 195
+ Y+ +++
Sbjct: 721 FNVSIRDYSAVIN 733
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 57/130 (43%)
Query: 35 LHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCR 94
L M G+ P + + L RV + + M + SS T+N++I C
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 95 QQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMAT 154
+ +S ++ + + F Y LI A+C+KG +A+ + ++ G S+
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 155 FSTIMHALCR 164
+S +++ LCR
Sbjct: 728 YSAVINRLCR 737
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E+D + NT++ + +AL++ M G+RP++ + L L G + +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L DM+ K P+ VTFN +I F ++ V E L M K DPD FTYN LIN +C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + A M+ C P + T++T++ C+ V + ++F + G+ +T
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y TL+ G + A ++++M GV PD +T++IL+ G G+
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 106/202 (52%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M+ +G+ +L IL R L M++ G PS VT + ++ G+C
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ + +L+ M + G PD T+ LI+ + K S A+ ++ M++ GC+P++ T+
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+++ LC+ G++ A + ++++ I + I+NT++D K R + A L++EM
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
KG+ P+ VT++ L+ YGR
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGR 235
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 115/230 (50%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE L++L+ G+ + I +A+ ++ +M ++G RP T L L
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+++G +P+ VT+ V++ G C++ + + +LL+ M + D +N +I++
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C A++ M G P++ T+S+++ LC G +A ++ + + I PN
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+N L+D +VK + +A L+++M + + PD T+N L+ G + R
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y D TL+ G EA+ ++ RM G +P+L ++ L + GD +
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M V FN +I C+ + + +L M G P+ TY+ LI+
Sbjct: 171 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G+ S A L+ M++ P++ TF+ ++ A +EG +EA K+ D + I P+
Sbjct: 231 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YN+L++G+ + +A ++E M K PD T+N L+ G K R
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%)
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
M++ P PS FN ++ + + + SL M + G + +TYNILIN +C + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
S+A+ L MMK G EPS+ T S++++ C + +A + D++ +MG P+T + T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
L+ G + +A L + M +G P+ VT+ ++V G K G
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 106/219 (48%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
++ G G I A ++L++M + + + L + LFK+M KG
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
RP+ VT++ +I C LL M + +P+ T+N LI+A+ +GK A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ M+K +P + T++++++ C + +A+++F+ + P+ YNTL+ G+
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
K++ + L+ EM +G+ D VT+ L+ G + G
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D N+L+ GF + +A + M P L L + + +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF++M +G +VT+ +I G + + M G PD TY+IL++ C
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK A++ + M K+ + + ++T++ +C+ G V + +F + G+ PN
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
YNT++ G R + +A L ++M+ G PD T+N L+ H + G
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL++GF + + ++ M G+ T L + L GD + K+F
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K M+ G P +T+++++ G C L + M K D + Y +I C
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK D + G +P++ T++T++ LC + + EA + ++++ G P++ Y
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 191 NTLMDGYVKAREIGQANMLYEEMRG 215
NTL+ +++ + + L EMR
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRS 528
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%)
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV 174
P F +N L++A K + + M + G ++ T++ +++ CR + A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 175 FDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
++ +G P+ ++L++GY + I A L ++M G PD +TF L+ G +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 235 YGRNGE 240
+ + E
Sbjct: 128 HNKASE 133
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 112/229 (48%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E+D + NT++ + +AL++ M G+RP++ + L L G + +
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L DM+ K P+ VTFN +I F ++ V E L M K DPD FTYN L+N +C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + A M+ C P + T++T++ C+ V + ++F + G+ +T
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y TL+ G + A ++++M GV PD +T++IL+ G G+
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 114/230 (49%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE L++L+ G+ + I +A+ ++ +M ++G RP T L L
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+++G +P+ VT+ V++ G C++ + +LL+ M + D +N +I++
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C A++ M G P++ T+S+++ LC G +A ++ + + I PN
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+N L+D +VK + +A LY++M + + PD T+N LV G + R
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y D TL+ G EA+ ++ RM G +P+L ++ L + GD
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M V FN +I C+ + + +L M G P+ TY+ LI+
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G+ S A L+ M++ P++ TF+ ++ A +EG +EA K++D + I P+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YN+L++G+ + +A ++E M K PD VT+N L+ G K R
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 103/202 (50%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M+ + + L IL R L M++ G PS VT + ++ G+C
Sbjct: 109 EKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ + +L+ M + G PD T+ LI+ + K S A+ ++ M++ GC+P++ T+
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+++ LC+ G+ A + ++++ I + I+NT++D K R + A L++EM
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
KG+ P+ VT++ L+ YGR
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGR 310
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF M++ P PS V FN ++ + + V SL M + +TYNILIN +C
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + S+A+ L MMK G EPS+ T S++++ C + +A + D++ +MG P+T
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ TL+ G + +A L + M +G P+ VT+ ++V G K G
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 35/251 (13%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
++L+ + G +A +L M + + P+L L ++ G + KL+ DM++
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK----- 130
+ P T+N ++ GFC L + + M C PD TYN LI +C
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 131 ------------------------------GKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
G A M+ +G P + T+S ++
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
LC G + +A +VFD +Q I + IY T+++G KA ++ L+ + KGV P
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 221 DCVTFNILVGG 231
+ VT+N ++ G
Sbjct: 539 NVVTYNTMISG 549
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
AL++L++M + + + L + LFK+M KG RP+ VT++ +I
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
C LL M + +P+ T+N LI+A+ +GK A + M+K +P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
+ T++++++ C + +A+++F+ + P+ YNTL+ G+ K++ + L+
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYG 236
EM +G+ D VT+ L+ G + G
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDG 449
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D N+L+ GF + +A + M P + L + + +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF++M +G +VT+ +I G + + M G PD TY+IL++ C
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK A++ + M K+ + + ++T++ +C+ G V + +F + G+ PN
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
YNT++ G R + +A L ++M+ G P+ T+N L+ H + G
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL++GF + + ++ M G+ T L + L GD + K+F
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K M+ G P +T+++++ G C L + M K D + Y +I C
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK D + G +P++ T++T++ LC + + EA + ++++ G PN+ Y
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
NTL+ +++ + + L EMR D T ++
Sbjct: 579 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 617
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
+H D TL++G + G A V +M GV P + +IL L G
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
++F M + + + MI G C+ + G L + G P+ TYN +
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGN 167
I+ C K A L M ++G P+ T++T++ A R+G+
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 116/227 (51%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D V + L++G+L +G++ E V + D G S+ L LL++ W+++
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M R G P++ TFN++ FC + L M + G +PD TYN L+++YC +
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ A +M + P + T+++++ LC++G V EA + F R+ D GI P+ Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
NTL+ Y K + Q+ L EM G V PD T ++V G + GR
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 1/234 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E D NTL+ + G + EA + M V P L T L + L + G
Sbjct: 267 FEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAH 326
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ F M+ +G +P +++N +I +C++ + + LLH M PD FT +++ +
Sbjct: 327 QTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR-IQDMGIAPN 186
+G+ A++++ + + + ++ +LC+EG A+ + DR I++ G
Sbjct: 387 VREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAK 446
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
YN L++ + I +A +L +++ + D T+ L+G + GRN E
Sbjct: 447 PETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNRE 500
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 117/222 (52%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+RGF G I AL + +M G P++ L ++ +KL + M
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P+ +++NV+I G CR+ + +L M + G D TYN LI YC +G
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ M+++G PS+ T+++++H++C+ GN+ A + D+++ G+ PN Y TL+D
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
G+ + + +A + EM G SP VT+N L+ GH G+
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
N N + N L+ G G + +A+ VL M++ G+ P + + + + R D
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
++ ++M+ KG +P ++T++ +I GFC Q+ L M + G PD FTY L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
INAYC++G A+ N M++ G P + T+S +++ L ++ EA+++ ++
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 184 APNTTIYNTLMD---------------GYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
P+ Y+TL++ G+ + +A+ ++E M GK PD +NI+
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 229 VGGHYKYG 236
+ GH + G
Sbjct: 647 IHGHCRAG 654
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
N Y D NTL++G+ G +AL + M G+ PS+ T L + + G+
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+ M +G P+ T+ ++ GF ++ + +L M G P TYN L
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
IN +C+ GK A+ L M + G P + ++ST++ CR +V EA +V + + GI
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
P+T Y++L+ G+ + R +A LYEEM G+ PD T+ L+ +
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 1/228 (0%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK- 68
S SV + +++ + + +I +AL ++H + G P + + + +R S +
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+FK+ML P+ T+N++I GFC + V +L M GC P+ TYN LI+ YC
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
K L M G EP++ +++ +++ LCREG + E V + G + +
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
YNTL+ GY K QA +++ EM G++P +T+ L+ K G
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
TL+ GF G + EA VL M D G PS+ L G + +DM K
Sbjct: 385 TLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK 444
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G P V+++ ++ GFCR + + M + G PD TY+ LI +C + +T A
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
D M++ G P T++ +++A C EG++ +A ++ + + + G+ P+ Y+ L++G
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
K +A L ++ + P VT++ L+
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 43/264 (16%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ G+ + I + +L M G+ P+L + ++ L R G V + +M R
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 76 KGPRPSSVTFNVMICGFCRQ----QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
+G VT+N +I G+C++ Q LV+ +L + G P TY LI++ C G
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML----RHGLTPSVITYTSLIHSMCKAG 359
Query: 132 KTSVAMDWLNMMM-----------------------------------KNGCEPSMATFS 156
+ AM++L+ M NG PS+ T++
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 157 TIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
+++ C G + +A V + +++ G++P+ Y+T++ G+ ++ ++ +A + EM K
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 217 GVSPDCVTFNILVGGHYKYGRNGE 240
G+ PD +T++ L+ G + R E
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKE 503
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 73/214 (34%), Gaps = 50/214 (23%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D ++L++GF EA D+ M VG+ P T L GD +L
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 71 KDMLRKGPRPSSVTFNVMI-------------------------------------C--- 90
+M+ KG P VT++V+I C
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 91 ----------GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL 140
GFC + + + + M PD YNI+I+ +C G A
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLY 663
Query: 141 NMMMKNGCEPSMATFSTIMHALCREGNVIEARKV 174
M+K+G T ++ AL +EG V E V
Sbjct: 664 KEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ GF VG + +AL + ++ G+ PSL IL R GD K+ K+M
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G +PS VT+ ++I F R + L M + G PD TY++LI+ +CIKG+ +
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A M++ CEP+ ++T++ C+EG+ A K+ +++ +APN Y +++
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
K R+ +A L E+M G+ P +++
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 4/239 (1%)
Query: 2 WQNHNEYES----DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLL 57
W NE +S D L++G G I ++ D+L + + G P++ T L
Sbjct: 149 WSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC 208
Query: 58 LRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDA 117
+ G+ LF +M + G + T+ V+I G + G + M + G P+
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 118 FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR 177
+TYN ++N C G+T A + M + G ++ T++T++ LCRE + EA KV D+
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
++ GI PN YNTL+DG+ ++G+A L +++ +G+SP VT+NILV G + G
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ G G+ + ++ +M++ GV P+L + L + G +++F +M +G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+ VT+N +I G CR+ L ++ M G +P+ TYN LI+ +C GK A+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ G PS+ T++ ++ CR+G+ A K+ +++ GI P+ Y L+D +
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++ + +A L M G+ PD T+++L+ G G+ E
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ G + EA V+ +M+ G+ P+L L VG G L +D+
Sbjct: 307 NTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G PS VT+N+++ GFCR+ ++ M + G P TY ILI+ +
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ M + G P + T+S ++H C +G + EA ++F + + PN IYNT++
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
GY K +A L +EM K ++P+ ++ ++
Sbjct: 487 GYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N +M G +A V MR+ GV ++ L L R K+ M
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P+ +T+N +I GFC L SL + G P TYNIL++ +C KG TS
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + M + G +PS T++ ++ R N+ +A ++ ++++G+ P+ Y+ L+
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
G+ ++ +A+ L++ M K P+ V +N ++ G+ K G +
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 99/189 (52%)
Query: 52 ILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF 111
IL + G+ + L ++ G P+ V + +I G C++ + + L M K
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 112 GCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEA 171
G + TY +LIN G + M ++G P++ T++ +M+ LC++G +A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 172 RKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+VFD +++ G++ N YNTL+ G + ++ +AN + ++M+ G++P+ +T+N L+ G
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 232 HYKYGRNGE 240
G+ G+
Sbjct: 348 FCGVGKLGK 356
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDP------DAFTYNIL 123
F +M+ G P S FN ++ VVG S + F + D +++ IL
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLT-------FVVGSSSFNQWWSFFNENKSKVVLDVYSFGIL 169
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
I C G+ + D L + + G P++ ++T++ C++G + +A+ +F + +G+
Sbjct: 170 IKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL 229
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
N Y L++G K Q +YE+M+ GV P+ T+N ++ K GR +
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKD 286
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A+ + M ++G+ P + ++L G +LFK M+ K P+ V +N MI
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
G+C++ LL M + P+ +Y +I C + K+ A + M+ +G +
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID 545
Query: 150 PSMATFSTIMHA 161
PS + S I A
Sbjct: 546 PSTSILSLISRA 557
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 116/229 (50%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+++ + NT++ + A+D+ M G+RP++ L L G + +
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L +ML K P+ VTFN +I F ++ LV E L M + DPD TYN+LIN +C
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + A M+ C P++ T++T+++ C+ V + ++F + G+ NT
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y T++ G+ +A + A M++++M V D +T++IL+ G YG+
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 118/233 (50%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE D L++L+ G+ + I +A+ ++ +M ++G +P T L L
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+++G +P VT+ ++ G C++ + + +LL+ M + +N +I++
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C VA+D M G P++ T++++++ LC G +A ++ + + I PN
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+N L+D + K ++ +A L+EEM + + PD +T+N+L+ G + R E
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 104/202 (51%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M+ +G+ L +I R + M++ G P VT + ++ G+C
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ + +L+ M + G PD FT+ LI+ + K S A+ ++ M++ GC+P + T+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
T+++ LC+ G++ A + ++++ I N I+NT++D K R + A L+ EM
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
KG+ P+ VT+N L+ YGR
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGR 308
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y+ D TL+ G EA+ ++ +M G +P L + L + GD
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M + + V FN +I C+ + + V L M G P+ TYN LIN
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G+ S A L+ M++ P++ TF+ ++ A +EG ++EA K+ + + I P+T
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YN L++G+ + +A +++ M K P+ T+N L+ G K R
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF DM++ P PS V FN ++ + + SL M G D +TY+I IN +C
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + S+A+ L MMK G EP + T S++++ C + +A + D++ +MG P+T
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ TL+ G + +A L ++M +G PD VT+ +V G K G
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 38/251 (15%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+L+ N G +A +L M + + P++ L + G KL ++M++
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI------ 129
+ P ++T+N++I GFC L + + M C P+ TYN LIN +C
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 130 -----------------------------KGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
G A M+ N + T+S ++H
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
LC G + A +F +Q + N IYNT+++G KA ++G+A L+ + + P
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKP 533
Query: 221 DCVTFNILVGG 231
D VT+N ++ G
Sbjct: 534 DVVTYNTMISG 544
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 3/214 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ GF + + +++ M G+ + T + + + GD S +FK M+
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+T+++++ G C L + + K + + F YN +I C GK
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A D + +P + T++T++ LC + + EA +F ++++ G PN+ YNTL+
Sbjct: 522 AWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
++ + + L +EMR G D T +++
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGDASTISLVT 612
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 38/256 (14%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
N L+ F G + EA + M + P +L ++FK M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG--------------------C 113
+ K P+ T+N +I GFC+ + + G L M + G C
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 114 DP---------------DAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
D D TY+IL++ C GK A+ + K+ E ++ ++T+
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ +C+ G V EA +D + I P+ YNT++ G R + +A+ L+ +M+ G
Sbjct: 510 IEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 219 SPDCVTFNILVGGHYK 234
P+ T+N L+ + +
Sbjct: 567 LPNSGTYNTLIRANLR 582
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 3/157 (1%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
N +D + L+ G + G + AL + ++ + ++ + + + G G
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
W LF + +P VT+N MI G C ++ L + L M + G P++ TYN LI
Sbjct: 522 AWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
A + + + + M +G +T S + + L
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 118/233 (50%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE + + NT++ G + ALDVL M+ +G+RP + L L G +G
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++ DM+R G P +TF+ +I + ++ L+ + + M + +P+ TYN LIN
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
CI G A LN+++ G P+ T++T+++ C+ V + K+ + G+ +T
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
YNTL GY +A + A + M GV PD TFNIL+ G +G+ G+
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGK 412
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E +L+ GF +V +EA+ ++ ++ +G P++ + L G +
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ K M + G RP VT+N +I V +L M + G PD T++ LI+ Y
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY 264
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+G+ A N M++ P++ T++++++ LC G + EA+KV + + G PN
Sbjct: 265 GKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNA 324
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YNTL++GY KA+ + + M GV D T+N L G+ + G+
Sbjct: 325 VTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ + G + EA + M V P++ L L G K+
Sbjct: 253 DVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL 312
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++ KG P++VT+N +I G+C+ + + G +L +M + G D D FTYN L YC
Sbjct: 313 NVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQA 372
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK S A L M+ G P M TF+ ++ LC G + +A + +Q Y
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
N ++ G KA ++ A L+ + KGVSPD +T+
Sbjct: 433 NIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D TL+ F + AL L +M +G PS+ L V + L
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++ G P+ V +N +I C + + +L M K G PD TYN LI
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G V+ L+ MM+ G P + TFS ++ +EG ++EA+K ++ + + PN Y
Sbjct: 233 GTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTY 292
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
N+L++G + +A + + KG P+ VT+N L+ G+ K R
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKR 339
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 1/204 (0%)
Query: 29 FEALDVLHR-MRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNV 87
+EA+ L R + +G+ L + T L R M++ G PS VTF
Sbjct: 95 YEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGS 154
Query: 88 MICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG 147
++ GFC SL+ + G +P+ YN +I++ C KG+ + A+D L M K G
Sbjct: 155 LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214
Query: 148 CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQAN 207
P + T+++++ L G + ++ + MGI+P+ ++ L+D Y K ++ +A
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274
Query: 208 MLYEEMRGKGVSPDCVTFNILVGG 231
Y EM + V+P+ VT+N L+ G
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLING 298
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 54 FRLLLRVG----DYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMP 109
+R LR G + LF DM P PS V F+ ++ + SL +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 110 KFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVI 169
G D +++ LI+ +C + S+A+ L MMK G EPS+ TF ++++ C
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 170 EARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
EA + D+I +G PN IYNT++D + ++ A + + M+ G+ PD VT+N L+
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 230 GGHYKYGRNG 239
+ G G
Sbjct: 227 TRLFHSGTWG 236
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 3/211 (1%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+AL + M + PS+ + L + ++ Y +V LF+ + G +F +I
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
FCR L + S L M K G +P T+ L+N +C + AM ++ ++ G E
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P++ ++TI+ +LC +G V A V ++ MGI P+ YN+L+ + G + +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+M G+SPD +TF+ L+ YG+ G+
Sbjct: 242 LSDMMRMGISPDVITFSALID---VYGKEGQ 269
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 1/206 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+L+ G G++ EA VL+ + G P+ L + K+ M R
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR 352
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G + T+N + G+C+ E +L M G PD +T+NIL++ C GK
Sbjct: 353 DGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGK 412
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ L + K+ + T++ I+ LC+ V +A +F + G++P+ Y T+M
Sbjct: 413 ALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMI 472
Query: 196 GYVKAREIGQANMLYEEMRGK-GVSP 220
G + R +A+ LY +M+ + G+ P
Sbjct: 473 GLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 45/112 (40%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D NTL +G+ G A VL RM GV P + IL L G G
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
+D+ + +T+N++I G C+ + L + G PD TY
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 118/229 (51%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE D + +L+ GF + +A+ ++ +M ++G +P + A + L + +
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
FK++ RKG RP+ VT+ ++ G C LL M K P+ TY+ L++A+
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
GK A + M++ +P + T+S++++ LC + EA ++FD + G +
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
YNTL++G+ KA+ + L+ EM +G+ + VT+N L+ G ++ G
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y+ D N ++ + +A D + G+RP++ T L L +
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+L DM++K P+ +T++ ++ F + ++ + L M + DPD TY+ LIN
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C+ + A ++M+ GC + +++T+++ C+ V + K+F + G+ NT
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
YNTL+ G+ +A ++ +A + +M G+SPD T+NIL+GG
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF DM++ P PS V FN ++ + + V SL M G D +T+NI+IN +C
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ S+A+ L M+K G EP T ++++ CR V +A + D++ ++G P+
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
YN ++D K + + A ++E+ KG+ P+ VT+ LV G
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
+D N ++ F + AL +L +M +G P I L R L
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
M+ G +P V +N +I C+ + + + + G P+ TY L+N C
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
+ S A L+ M+K P++ T+S ++ A + G V+EA+++F+ + M I P+
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y++L++G I +AN +++ M KG D V++N L+ G K R
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M +G+R L I+ + ML+ G P VT ++ GFCR+
Sbjct: 109 KKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR 168
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ SL+ M + G PD YN +I++ C + + A D+ + + G P++ T+
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+ +++ LC +A ++ + I PN Y+ L+D +VK ++ +A L+EEM
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 216 KGVSPDCVTFNILVGGHYKYGRNGEWN 242
+ PD VT++ L+ G + R E N
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEAN 315
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
L+ G N +A +L M + P++ + L ++ G +LF++M+R
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P VT++ +I G C + + LM GC D +YN LIN +C +
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
M M + G + T++T++ + G+V +A++ F ++ GI+P+ YN L+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE-WN 242
G E+ +A +++E+M+ + + D VT+ ++ G K G+ E W+
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A+D+ M PS+ L ++++ Y V L K M G R TFN++I
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
FC + + S+L M K G +PD T L+N +C + + S A+ ++ M++ G +
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P + ++ I+ +LC+ V +A F I+ GI PN Y L++G + A L
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+M K ++P+ +T++ L+ K G+
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGK 275
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+ L+ F+ G + EA ++ M + + P + + L L ++F M+
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG V++N +I GFC+ + + G L M + G + TYN LI + G
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A ++ + M G P + T++ ++ LC G + +A +F+ +Q + + Y T++
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
G K ++ +A L+ + KG+ PD VT+ ++ G
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
KLF++M ++G ++VT+N +I GF + + + M FG PD +TYNIL+
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G+ A+ M K + + T++T++ +C+ G V EA +F + G+ P+
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGV-SPDC 222
Y T+M G + + LY +M+ +G+ DC
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 19/234 (8%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
N+L+R + N G+ E++ + M+ +G+ PS+ L +LL+ G G LF +M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 75 RK-GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
R G P S TFN +I GFC+ + + M + C+PD TYN +I+ C GK
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 134 SVAMDWLNMMMKNGCE--PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
+A + L+ M+K + P++ +++T++ C + + EA VF + G+ PN YN
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 192 TLMDGYVKAREIGQANMLYEEMRG---------KGVSPDCVTFNILVGGHYKYG 236
TL+ G +A Y+E++ +PD TFNIL+ H G
Sbjct: 321 TLIKGLSEAHR-------YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAG 367
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 18/233 (7%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
TL+RG+ I EA+ V H M G++P+ L + L Y + KD+L
Sbjct: 286 TLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEI----KDILIG 341
Query: 77 GP------RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
G P + TFN++I C L + M PD+ +Y++LI C++
Sbjct: 342 GNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMR 401
Query: 131 GKTSVAMDWLN-------MMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
+ A N ++ K+ C+P A ++ + LC G +A KVF ++ G+
Sbjct: 402 NEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV 461
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ Y TL+ G+ + + A L M + PD T+ +L+ G K G
Sbjct: 462 QDPPS-YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG 513
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 16/240 (6%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRM--RDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
D NT++ G G + A +VL M + V P++ + T L R +
Sbjct: 243 DVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVL 302
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLL----HLMPKFGCDPDAFTYNILI 124
+F DML +G +P++VT+N +I G + +L F PDA T+NILI
Sbjct: 303 VFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA--PDACTFNILI 360
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI- 183
A+C G AM M+ P A++S ++ LC A +F+ + + +
Sbjct: 361 KAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Query: 184 ------APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
P YN + + + QA ++ ++ +GV D ++ L+ GH + G+
Sbjct: 421 LGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGK 479
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 53/230 (23%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL+ GF M+ EA +++F
Sbjct: 208 DSYTFNTLINGFCKNSMVDEA-----------------------------------FRIF 232
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCD--PDAFTYNILINAYC 128
KDM P VT+N +I G CR + + ++L M K D P+ +Y L+ YC
Sbjct: 233 KDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYC 292
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI----- 183
+K + A+ + M+ G +P+ T++T++ L EA + +D I+D+ I
Sbjct: 293 MKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS------EAHR-YDEIKDILIGGNDA 345
Query: 184 ----APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
AP+ +N L+ + A + A +++EM + PD ++++L+
Sbjct: 346 FTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLI 395
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 90/224 (40%), Gaps = 10/224 (4%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRD--VGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
NTL++G E D+L D P IL + G + K+F++M
Sbjct: 320 NTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEM 379
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLH-------LMPKFGCDPDAFTYNILINA 126
L P S +++V+I C + E+L + L+ K C P A YN +
Sbjct: 380 LNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEY 439
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
C GKT A +MK G + ++ T++ CREG A ++ + P+
Sbjct: 440 LCANGKTKQAEKVFRQLMKRGVQDP-PSYKTLITGHCREGKFKPAYELLVLMLRREFVPD 498
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
Y L+DG +K E A+ + M P TF+ ++
Sbjct: 499 LETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLA 542
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 120 YNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ 179
+N LI +Y G ++ M + G PS+ TF++++ L + G A +FD ++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 180 -DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
G+ P++ +NTL++G+ K + +A ++++M +PD VT+N ++ G + G+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 82/201 (40%), Gaps = 8/201 (3%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D N L++ + G + A+ V M ++ + P ++ ++L R L ++
Sbjct: 349 FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Query: 68 KLFKDMLRKGP-------RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
LF ++ K +P + +N M C E + + K G D +Y
Sbjct: 409 TLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSY 467
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
LI +C +GK A + L +M++ P + T+ ++ L + G + A R+
Sbjct: 468 KTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLR 527
Query: 181 MGIAPNTTIYNTLMDGYVKAR 201
P T +++++ K +
Sbjct: 528 SSYLPVATTFHSVLAELAKRK 548
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 113/215 (52%), Gaps = 1/215 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL++G N GMI EA + + M + G+ P + IL L ++G L K M+
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P TFN++I G+ Q + +L +M G DPD +TYN L+N C K
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
M+ M++ GC P++ TF+ ++ +LCR + EA + + +++ + P+ + TL+D
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 196 GYVKAREIGQANMLYEEM-RGKGVSPDCVTFNILV 229
G+ K ++ A L+ +M VS T+NI++
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 109/225 (48%)
Query: 12 FSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
S N L+R G + E +L ++ GV P+L + + L + G+ ++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
++ +GP+P +T+N +I G C+ E L M G +PD++TYN LI YC G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
+A + + NG P T+ +++ LC EG A +F+ GI PN +YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
TL+ G I +A L EM KG+ P+ TFNILV G K G
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
N + D +L+ G + G AL + + G++P++ L + L G
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
+L +M KG P TFN+++ G C+ + + L+ +M G PD FT+NILI+
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
Y + K A++ L++M+ NG +P + T++++++ LC+ + + + + + G AP
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N +N L++ + R++ +A L EEM+ K V+PD VTF L+ G K G
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
T++ GF E ++ +M GV LS L R+L + GD KL ++++
Sbjct: 186 TVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G P+ T+N+ I G C++ L ++ + + G PD TYN LI C K A
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+L M+ G EP T++T++ C+ G V A ++ G P+ Y +L+DG
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
E +A L+ E GKG+ P+ + +N L+ G
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 1/219 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y D N L+ G+ + AL++L M D GV P + L L + + V
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ +K M+ KG P+ TFN+++ CR + L LL M +PDA T+ LI+ +
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 128 CIKGKTSVAMDWLNMMMKN-GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
C G A M + S T++ I+HA + NV A K+F + D + P+
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
Y ++DG+ K + EM G P T
Sbjct: 637 GYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 675
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 9/212 (4%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
N L+ + EAL +L M++ V P L + GD + LF+ M
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Query: 75 RKGPRPSSV-TFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
SS T+N++I F + + + E L M PD +TY ++++ +C G
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
++ +L MM+NG PS+ T +++ LC E V EA + R+ G+ P NT+
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTI 711
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
D V +E+ ++ E++ K C+T+
Sbjct: 712 CD--VDKKEVAAPKLVLEDLLKK----SCITY 737
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N +M ++ G +A V RMRD G+ P + + TI + + + +L +M
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSS 174
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G + V + ++ GF + G L M G T+N L+ C KG
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKE 234
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
L+ ++K G P++ T++ + LC+ G + A ++ + + G P+ YN L+
Sbjct: 235 CEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIY 294
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
G K + +A + +M +G+ PD T+N L+ G+ K G
Sbjct: 295 GLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 100/213 (46%)
Query: 19 MRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGP 78
M+ + G + EA++V RM P++ + + +L+ G + K++ M +G
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 79 RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD 138
P +F + + FC+ LL+ M GC+ + Y ++ + + + +
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 139 WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYV 198
M+ +G ++TF+ ++ LC++G+V E K+ D++ G+ PN YN + G
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 199 KAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ E+ A + + +G PD +T+N L+ G
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYG 295
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
Y KGK A++ M CEP++ +++ IM L G +A KV+ R++D GI P+
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ M + K A L M +G + V + +VGG Y+ E
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAE 199
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EA + M+ GV P+L + + + G+ + L+K++L P+ V F ++
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLV 311
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
GFC+ + LV SL M KFG DP+ + YN LI+ +C G A+ L+ M
Sbjct: 312 DGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLS 371
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P + T++ +++ LC E V EA ++F ++++ I P++ YN+L+ GY K + QA L
Sbjct: 372 PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Query: 210 YEEMRGKGVSPDCVTFNILVGGH 232
EM GV P+ +TF+ L+ G+
Sbjct: 432 CSEMTASGVEPNIITFSTLIDGY 454
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 7/225 (3%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V + L+ FL +G+ EAL V R++ P A + L+R + SVW ++ M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWV---SREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 74 LRKGPRPS-SVTFNVMICGFCRQQGLVVG-ESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
+ +G P + F + C C +QGL E LL M G P+ + Y I I C
Sbjct: 191 ISRGLVPDVHIYFVLFQC--CFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDN 248
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
K A +M K+G P++ T+S ++ C+ GNV +A ++ I + PN ++
Sbjct: 249 KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
TL+DG+ KARE+ A L+ M GV P+ +N L+ GH K G
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSG 353
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%)
Query: 42 GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVG 101
G+ P + +LF+ + G Y KL +M G +P+ + + I CR +
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 102 ESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHA 161
E + LM K G P+ +TY+ +I+ YC G A ++ P++ F T++
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313
Query: 162 LCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
C+ ++ AR +F + G+ PN +YN L+ G+ K+ + +A L EM +SPD
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 222 CVTFNILVGG 231
T+ IL+ G
Sbjct: 374 VFTYTILING 383
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V TL+ GF + A + M GV P+L L + G+ L +M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
P T+ ++I G C + + L M P + TYN LI+ YC +
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A+D + M +G EP++ TFST++ C ++ A ++ + GI P+ Y L
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+D + K + +A LY +M G+ P+ TF LV G +K GR
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ + V N L+ G G + EA+ +L M + + P + TIL L +
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF+ M + PSS T+N +I G+C++ + L M G +P+ T++ LI+ YC
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
AM M G P + T++ ++ A +E N+ EA +++ + + GI PN
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ L+DG+ K + A Y+E + + V F L+ G
Sbjct: 516 TFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEG 558
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 101/214 (47%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+L+ G+ + +ALD+ M GV P++ + L V D + L+ +M
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P VT+ +I ++ + L M + G P+ T+ L++ + +G+ SV
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSV 532
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+D+ + + F+ ++ LC+ G ++ A + F ++ GI P+ Y +++
Sbjct: 533 AIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLK 592
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
G+++ + I ML +M G+ P+ + +L
Sbjct: 593 GHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLA 626
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 97/227 (42%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D L+ G + EA + +M++ + PS + L + + L
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M G P+ +TF+ +I G+C + + L M G PD TY LI+A+ +
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
A+ + M++ G P+ TF+ ++ +EG + A + N +
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGF 552
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
L++G + I +A+ + +MR G++PD ++ ++ GH + R
Sbjct: 553 TCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKR 599
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ NT++ G + +AL++ M G+RP++ + L L G + +L DM
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ + P TF+ +I F ++ LV E L M K DP TY+ LIN +C+ +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A M+ C P + T++T++ C+ V E +VF + G+ NT YN L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ G +A + A +++EM GV P+ +T+N L+ G K G+
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y+ + NTL+ G EA+ ++ RM G +P L ++ L + GD +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M + P + +N +I G C+ + + +L M G P+ TY+ LI+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G+ S A L+ M++ P + TFS ++ A +EG ++EA K++D + I P+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y++L++G+ + +A ++E M K PD VT+N L+ G KY R E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL++GF + E ++V M G+ + IL + L + GD ++F
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K+M+ G P+ +T+N ++ G C+ L + + + +P +TYNI+I C
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK D + G +P + ++T++ CR+G+ EA +F +++ G PN+ Y
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
NTL+ ++ + + L +EMR G + D T ++
Sbjct: 575 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 613
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 105/202 (51%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M+++G+ + +IL R + M++ G P+ VT + ++ G+C
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ + +L+ M G P+ T+N LI+ + K S AM ++ M+ GC+P + T+
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+++ LC+ G+ A + ++++ + P IYNT++DG K + + A L++EM
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
KG+ P+ VT++ L+ YGR
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGR 306
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D ++ G G A ++L++M + P + + L +
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LFK+M KG RP+ VT++ +I C LL M + +PD FT++ LI+A+
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+GK A + M+K +PS+ T+S++++ C + EA+++F+ + P+
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
YNTL+ G+ K + + + ++ EM +G+ + VT+NIL+ G ++ G
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ F+ G + EA + M + PS+ + L ++F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ M+ K P VT+N +I GFC+ + + G + M + G + TYNILI
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G +A + M+ +G P++ T++T++ LC+ G + +A VF+ +Q + P Y
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
N +++G KA ++ L+ + KGV PD V +N ++ G + G E +
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF +M++ P PS + F+ ++ + V SL M G + +TY+ILIN +C
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + +A+ L MMK G EP++ T S++++ C + EA + D++ G PNT
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+NTL+ G + +A L + M KG PD VT+ ++V G K G
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ G G + +A+ V ++ + P++ I+ + + G W LF ++
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG +P V +N MI GFCR+ ++L M + G P++ YN LI A G
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHAL 162
+ + + M G +T + + L
Sbjct: 590 SAELIKEMRSCGFAGDASTIGLVTNML 616
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
+ +E D V L+RG+ G I EA V M+ G+ P++ +I+ L R G
Sbjct: 249 DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISR 308
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
+F DML G P+++TFN ++ + + + M K GC+PD TYN LI
Sbjct: 309 AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
A+C A+ LN M+K CE + +TF+TI + ++ +V A +++ ++ + P
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEP 428
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
NT YN LM +V ++ + +EM K V P+ T+ +LV + G WN
Sbjct: 429 NTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVT---MFCGMGHWN 482
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 1/195 (0%)
Query: 38 MRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQG 97
M+ V S+ TIL R +R G F M G P + F+++I R++
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR 236
Query: 98 LVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFST 157
+S + K +PD Y L+ +C G+ S A M G EP++ T+S
Sbjct: 237 ASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSI 295
Query: 158 IMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
++ ALCR G + A VF + D G APN +N LM +VKA + +Y +M+ G
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
Query: 218 VSPDCVTFNILVGGH 232
PD +T+N L+ H
Sbjct: 356 CEPDTITYNFLIEAH 370
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E L+R ++ G+ EA+ +RM D G P A +I+ L R
Sbjct: 183 EISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQS 242
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
F D L+ P + + ++ G+CR + E + M G +P+ +TY+I+I+A C
Sbjct: 243 FF-DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALC 301
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G+ S A D M+ +GC P+ TF+ +M + G + +V+++++ +G P+T
Sbjct: 302 RCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTI 361
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
YN L++ + + + A + M K + TFN +
Sbjct: 362 TYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTI 401
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
+V + W L M + S TF ++I + R + M +GC PD
Sbjct: 163 KVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKI 222
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
++I+I+ K + S A + + + K+ EP + ++ ++ CR G + EA KVF +
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEM 281
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ GI PN Y+ ++D + +I +A+ ++ +M G +P+ +TFN L+ H K GR
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 121/254 (47%), Gaps = 36/254 (14%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+L ++ RG+ V F++L V H+M+D PS A + +L+ +K +K+M
Sbjct: 88 ILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNM 147
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLV-VGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
G P+ + NV+I CR G V G + MPK GCDPD++TY LI+ C G+
Sbjct: 148 REIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGR 207
Query: 133 -----------------------TSV------------AMDWLNMMMKNGCEPSMATFST 157
TS+ AM +L M G EP++ T+S+
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 158 IMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
+M LC++G ++A ++F+ + G PN Y TL+ G K ++I +A L + M +G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 218 VSPDCVTFNILVGG 231
+ PD + ++ G
Sbjct: 328 LKPDAGLYGKVISG 341
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Query: 15 LNTLMRGFL-NVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
LN L++ N G + L + M G P L L R G KLF +M
Sbjct: 159 LNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM 218
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ K P+ VT+ +I G C + + L M G +P+ FTY+ L++ C G++
Sbjct: 219 VEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS 278
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
AM+ MMM GC P+M T++T++ LC+E + EA ++ DR+ G+ P+ +Y +
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ G+ + +A +EM G++P+ +T+NI V
Sbjct: 339 ISGFCAISKFREAANFLDEMILGGITPNRLTWNIHV 374
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 94/239 (39%), Gaps = 14/239 (5%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D TL+ G G I EA + M + P++ T L L + +
Sbjct: 189 DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR 248
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
++M KG P+ T++ ++ G C+ + L +M GC P+ TY LI C
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ K A++ L+ M G +P + ++ C EA D + GI PN
Sbjct: 309 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRL 368
Query: 189 IYNTLMDGYVK----------AREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+N +VK A +A LY MR +G+S + T LV K G
Sbjct: 369 TWNI----HVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGE 423
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 117/229 (51%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
++D +T++ G I A+ + M G++ S+ L R L + G +
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L KDM+ + P+ +TFNV++ F ++ L L M G P+ TYN L++ YC
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
++ + S A + L++M++N C P + TF++++ C V + KVF I G+ N
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y+ L+ G+ ++ +I A L++EM GV PD +T+ IL+ G G+
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 107/230 (46%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE D + NTL++G G + EA+ ++ RM + G +P + + + R GD
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L + M + + T++ +I CR + SL M G TYN L+
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C GK + L M+ P++ TF+ ++ +EG + EA +++ + GI+PN
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YNTLMDGY + +AN + + M SPD VTF L+ G+ R
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 5/238 (2%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
HN Y LN ++ F A VL ++ +G P + L + L G
Sbjct: 121 HNIY-----TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS 175
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
L M+ G +P VT+N ++ G CR + LL M + D FTY+ +I
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
++ C G A+ M G + S+ T+++++ LC+ G + + + I
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
PN +N L+D +VK ++ +AN LY+EM +G+SP+ +T+N L+ G+ R E N
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
LD ++ G+ ++ + I+ R + + +++ G P + TFN +I
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G + + L+ M + GC PD TYN ++N C G TS+A+D L M + +
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
+ T+STI+ +LCR+G + A +F ++ GI + YN+L+ G KA + +L
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
++M + + P+ +TFN+L+ K G+ E N
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 110/221 (49%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTLM G+ + EA ++L M P + T L + V K+F+++ +
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G ++VT+++++ GFC+ + + E L M G PD TY IL++ C GK
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A++ + K+ + + ++TI+ +C+ G V +A +F + G+ PN Y ++
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
G K + +AN+L +M G +P+ T+N L+ H + G
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 118/241 (48%), Gaps = 10/241 (4%)
Query: 9 ESDFSVL---NTLMRGFLNVGMIF----EALDVLHRMRDVGVRPSLSAITILFRLLLRVG 61
E DFS + N R L G++ +A+ + M PSL + F + R
Sbjct: 43 ERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTK 102
Query: 62 DYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYN 121
+ V K + G + T N+MI FCR S+L + K G +PD T+N
Sbjct: 103 QFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFN 162
Query: 122 ILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
LI ++GK S A+ ++ M++NGC+P + T+++I++ +CR G+ A + ++++
Sbjct: 163 TLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER 222
Query: 182 GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEW 241
+ + Y+T++D + I A L++EM KG+ VT+N LV G K G+ W
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK---W 279
Query: 242 N 242
N
Sbjct: 280 N 280
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 121/269 (44%), Gaps = 35/269 (13%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+S N+L+RG G + +L M + P++ +L + ++ G +
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPD------------ 116
L+K+M+ +G P+ +T+N ++ G+C Q L ++L LM + C PD
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 117 -----------------------AFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMA 153
A TY+IL+ +C GK +A + M+ +G P +
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 154 TFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM 213
T+ ++ LC G + +A ++F+ +Q + +Y T+++G K ++ A L+ +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 214 RGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
KGV P+ +T+ +++ G K G E N
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L++GF G I A ++ M GV P + IL L G ++F+D+ +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
V + +I G C+ + +L +P G P+ TY ++I+ C KG S A
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
L M ++G P+ T++T++ A R+G++ + K+ + ++ G + + + ++D
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Query: 198 VKA 200
+ A
Sbjct: 589 LSA 591
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 115/224 (51%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
LNTL+ G G + +A+ ++ RM + G +P+ + ++ + G +L + M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ + +V ++++I G C+ L +L + M G D TYN LI +C G+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
L M+K P++ TFS ++ + +EG + EA ++ + GIAPNT YN+L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+DG+ K + +A + + M KG PD +TFNIL+ G+ K R
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 114/216 (52%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+ ++ G G + A ++ + M G + + L G + KL +DM++
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+ P+ VTF+V+I F ++ L + LL M + G P+ TYN LI+ +C + +
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ +++M+ GC+P + TF+ +++ C+ + + ++F + G+ NT YNTL+
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
G+ ++ ++ A L++EM + V PD V++ IL+ G
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 113/224 (50%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+++D NTL+ GF N G + +L M + P++ ++L ++ G
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+L K+M+++G P+++T+N +I GFC++ L ++ LM GCDPD T+NILIN Y
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C + ++ M G + T++T++ C+ G + A+K+F + + P+
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
Y L+DG E+ +A ++ ++ + D + I++ G
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 114/233 (48%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE D + NTL+ G + EAL+++ RM ++G +P+L + L L G
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+ G +P+ VT+ ++ C+ + LL M + DA Y+I+I+
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G A + N M G + + T++T++ C G + K+ + I+PN
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++ L+D +VK ++ +A+ L +EM +G++P+ +T+N L+ G K R E
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%), Gaps = 4/224 (1%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
VLN + + G A+++L +M + ++ +I+ L + G + + LF +M
Sbjct: 234 VLNVMCKS----GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
KG + +T+N +I GFC G LL M K P+ T+++LI+++ +GK
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A L MM+ G P+ T+++++ C+E + EA ++ D + G P+ +N L
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++GY KA I L+ EM +GV + VT+N LV G + G+
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 4/231 (1%)
Query: 10 SDFSVLNTLMRGFLNVGMI-FEALDVLHRMRD-VGVRPSLSAITI--LFRLLLRVGDYGS 65
S FS N R L+ G++ +A D + RD + RP + I LF + + Y
Sbjct: 47 STFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYEL 106
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
V L K M KG S T ++MI FCR + L S + + K G +PD +N L+N
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
C++ + S A++ ++ M++ G +P++ T +T+++ LC G V +A + DR+ + G P
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N Y +++ K+ + A L +M + + D V ++I++ G K G
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 105/217 (48%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+L+ GF + EA+ ++ M G P + IL + +LF++M
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G ++VT+N ++ GFC+ L V + L M PD +Y IL++ C G+
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A++ + K+ E + + I+H +C V +A +F + G+ + YN ++
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+ + +A++L+ +M +G +PD +T+NIL+ H
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A + ++ +G P L L +L M+ G +P+ +T N ++
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G C + L+ M + G P+ TY ++N C G+T++AM+ L M + +
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
+S I+ LC++G++ A +F+ ++ G + YNTL+ G+ A L
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
+M + +SP+ VTF++L+ K G+ E +
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF+DM++ P P+ + FN + + + + +L M G +T +I+IN +C
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
K S A + +MK G EP F+T+++ LC E V EA ++ DR+ +MG P
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
NTL++G ++ A +L + M G P+ VT+ ++ K G+
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D N L+ G+ I + L++ M GV + L + + G K
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF++M+ + RP V++ +++ G C L + + K + D Y I+I+ C
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
K A D + G + ++ ++ LCR+ ++ +A +F ++ + G AP+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
YN L+ ++ + A L EEM+ G D T +++
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D L+ G + G + +AL++ ++ + + I+ + W LF
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ KG + + +N+MI CR+ L + L M + G PD TYNILI A+
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
+ A + + M +G ++T +++ L
Sbjct: 592 DDATTAAELIEEMKSSGFPADVSTVKMVINML 623
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 112/211 (53%), Gaps = 1/211 (0%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EAL+++ M + G++P++ T+L L + +L ML KG P+ +T+N +I
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
G+C++ + ++ LM P+ TYN LI YC K AM LN M++
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVL 459
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P + T+++++ CR GN A ++ + D G+ P+ Y +++D K++ + +A L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++ + KGV+P+ V + L+ G+ K G+ E
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 119/246 (48%), Gaps = 19/246 (7%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
N L+ G G + EA + +M +G++P++S TIL LL+ GD+ + F+ M
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L G +P + T+ I +CR+ L+ E ++ M + G PD FTY+ LI Y G+T
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 134 SVAMDWLNMMMKNGCEPSMATF-STIMH--------------ALCREGNVIEARKVFDRI 178
+ A D L M GCEPS TF S I H LC N++E V + +
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 179 QDM---GIAPNTTIYNTLMDGYVKAREIGQANMLYEEM-RGKGVSPDCVTFNILVGGHYK 234
+ M + PN Y L+ G + + A +++ M R +G+SP + FN L+ K
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 235 YGRNGE 240
++ E
Sbjct: 809 LKKHNE 814
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 111/219 (50%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N ++ G+ +G + EA + ++ + G+ P T L + D S +K+F +M
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG R + V + +I G C + + L M C P TY +LI + C + S
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A++ + M + G +P++ T++ ++ +LC + +AR++ ++ + G+ PN YN L++
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
GY K I A + E M + +SP+ T+N L+ G+ K
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 3/232 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+L+ G G A +L M D G+ P T + L + LF
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ +KG P+ V + +I G+C+ + +L M C P++ T+N LI+ C
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK A M+K G +P+++T + ++H L ++G+ A F ++ G P+ Y
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
T + Y + + A + +MR GVSPD T++ L+ G YG G+ N
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG---YGDLGQTN 689
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L++G+ + +A+ VL++M + V P + L R G++ S ++L M
Sbjct: 432 NELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G P T+ MI C+ + + L + + G +P+ Y LI+ YC GK
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A L M+ C P+ TF+ ++H LC +G + EA + +++ +G+ P + L+
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+K + A +++M G PD T+ + + + GR
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ G++ E V M + V P++ + ++G+ + ++
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P T+ +I G+C+++ L + + MP GC + Y LI+ C+ +
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
AMD M + C P++ T++ ++ +LC EA + +++ GI PN Y L+D
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ +A L +M KG+ P+ +T+N L+ G+ K G
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 8/216 (3%)
Query: 28 IFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNV 87
+ EA D+ + GV P++ T L + G + + ML K P+S+TFN
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 88 MICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG 147
+I G C L L M K G P T ILI+ G A M+ +G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 148 CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQAN 207
+P T++T + CREG +++A + ++++ G++P+ Y++L+ GY ++GQ N
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY---GDLGQTN 689
Query: 208 MLYE---EMRGKGVSPDCVTFNILVGG--HYKYGRN 238
++ MR G P TF L+ KYG+
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 19/246 (7%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVG--- 61
N D ++L++G+ ++G A DVL RMRD G PS L + LL +
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 62 ---------------DYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLL- 105
++ +V +L + M+ P++ ++ +I G C L V E +
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 106 HLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCRE 165
H+ G P +N L++ C K + A ++ M+ G P + + ++ L ++
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKK 844
Query: 166 GNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
G VF + G + + ++DG K + L+ M G T+
Sbjct: 845 GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
Query: 226 NILVGG 231
++L+ G
Sbjct: 905 SLLIEG 910
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 104/230 (45%), Gaps = 22/230 (9%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D T ++ + G + +A D++ +MR+ GV P L + L + +G + +
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLM--PKFGCDPDAFTYNILINAYC 128
K M G PS TF +I + LL + + G +P+ + ++
Sbjct: 696 KRMRDTGCEPSQHTFLSLI------------KHLLEMKYGKQKGSEPELCAMSNMM---- 739
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ-DMGIAPNT 187
+ ++ L M+++ P+ ++ ++ +C GN+ A KVFD +Q + GI+P+
Sbjct: 740 ---EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++N L+ K ++ +A + ++M G P + +L+ G YK G
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 114/232 (49%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
+ + E +LM G+ + G I +AL + H M G+ PS+ T L L R G
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIR 524
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
KLF +M +P+ VT+NVMI G+C + + L M + G PD ++Y LI
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
+ C+ G+ S A +++ + K CE + ++ ++H CREG + EA V + G+
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ Y L+DG +K ++ L +EM +G+ PD V + ++ K G
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 118/224 (52%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
+ +++L+ G G I EAL+++ R+ D GV P+L L L + + LF
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
M + G RP+ VT++++I FCR+ L S L M G + YN LIN +C G
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
S A ++ M+ EP++ T++++M C +G + +A +++ + GIAP+ + T
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
L+ G +A I A L+ EM V P+ VT+N+++ G+ + G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
+ + D TL+ G V L+++ M + PS +A++ L L + G
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE 350
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
L K ++ G P+ +N +I C+ + E L M K G P+ TY+ILI+
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
+C +GK A+ +L M+ G + S+ ++++++ C+ G++ A + + + P
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y +LM GY +I +A LY EM GKG++P TF L+ G ++ G
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+L+ G G I A + M + + P++ T L G +L+ +M
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG PS TF ++ G R + L + M ++ P+ TYN++I YC +G S
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A ++L M + G P ++ ++H LC G EA+ D + N Y L+
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
G+ + ++ +A + +EM +GV D V + +L+ G K+
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 35/232 (15%)
Query: 41 VGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVV 100
V + P + ++ L L++ +G +LF DM+ G RP + +I C + L
Sbjct: 186 VSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSR 245
Query: 101 GESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
+ ++ M GCD + YN+LI+ C K K A+ + +P + T+ T+++
Sbjct: 246 AKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVY 305
Query: 161 ALC-----------------------------------REGNVIEARKVFDRIQDMGIAP 185
LC + G + EA + R+ D G++P
Sbjct: 306 GLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 365
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
N +YN L+D K R+ +A +L++ M G+ P+ VT++IL+ + G+
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 35/223 (15%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
+L M D G++P T + + GD+ + ++ M+ +G P+ VT+ +I G C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 94 RQQGLVVGESLLHLMP---------KFGCDPDAFT------------------------- 119
+ + E L M +GC D T
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788
Query: 120 -YNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
YN+LI +C +G+ A + + M+ +G P T++T+++ LCR +V +A ++++ +
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
+ GI P+ YNTL+ G A E+G+A L EM +G+ P+
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G ++EA+ + + ++P + L L +V ++ ++ +ML
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
PS + ++ G ++ + +L+ + FG P+ F YN LI++ C K
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + M K G P+ T+S ++ CR G + A + D G+ + YN+L++
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
G+ K +I A EM K + P VT+ L+GG+ G+
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 72/285 (25%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N ++ G+ G + +A + L M + G+ P + L L G S K+F D L
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ-ASEAKVFVDGLH 604
Query: 76 KGP-RPSSVTFNVMICGFCRQ------------------------QGLVVGESLLHLMPK 110
KG + + + ++ GFCR+ G+++ SL H K
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 111 F-----------GCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIM 159
G PD Y +I+A G A ++M+ GC P+ T++ ++
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 160 HALCREGNVIEARKVFDRIQ-----------------------DM------------GIA 184
+ LC+ G V EA + ++Q DM G+
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL 784
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
NT YN L+ G+ + I +A+ L M G GVSPDC+T+ ++
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVG-DYGSVWKLFKDML 74
++ G G + EA + +M+ V P+ +L + D +L +L
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
KG ++ T+N++I GFCRQ + L+ M G PD TY +IN C +
Sbjct: 781 -KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
A++ N M + G P ++T++H C G + +A ++ + + G+ PN T
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Query: 85 FNVMICGFCRQQGLVVGESLLHLM-PKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMM 143
F+++I + R + ++ G + +M K P+ T + L++ +AM+ N M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 144 MKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREI 203
+ G P + ++ ++ +LC ++ A+++ ++ G N YN L+DG K +++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 204 GQANMLYEEMRGKGVSPDCVTFNILVGG 231
+A + +++ GK + PD VT+ LV G
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYG 306
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 69 LFKDMLRK-GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+FK M+ K P T + ++ G + + + L + M G PD + Y +I +
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C S A + + M GC+ ++ ++ ++ LC++ V EA + + + P+
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y TL+ G K +E + +EM SP + LV G K G+ E
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE 350
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D ++TL+ G G + EAL ++ RM + G +P + L + G+ LF
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ M + + S V ++++I C+ SL + M G D TY+ LI C
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK L M+ P + TFS ++ +EG ++EA+++++ + GIAP+T Y
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
N+L+DG+ K + +AN +++ M KG PD VT++IL+ + K R
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+L+ GF + EA + M G P + +IL + +LF
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+++ KG P+++T+N ++ GFC+ L + L M G P TY IL++ C
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ + A++ M K+ + ++ I+H +C V +A +F + D G+ P+ Y
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
N ++ G K + +A+ML+ +M+ G +PD T+NIL+ H
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 35/269 (13%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
++D ++L+ G N G + +L M + P + + L + ++ G +
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L+ +M+ +G P ++T+N +I GFC++ L + LM GC+PD TY+ILIN+YC
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 129 I-----------------------------------KGKTSVAMDWLNMMMKNGCEPSMA 153
GK + A + M+ G PS+
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 154 TFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM 213
T+ ++ LC G + +A ++F+++Q + IYN ++ G A ++ A L+ +
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 516
Query: 214 RGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
KGV PD VT+N+++GG K G E +
Sbjct: 517 SDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G +AL + + M G++ + + L L G + K+ ++M+ + P VTF
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
+ +I F ++ L+ + L + M G PD TYN LI+ +C + A ++M+
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
GCEP + T+S ++++ C+ V + ++F I G+ PNT YNTL+ G+ ++ ++
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
A L++EM +GV P VT+ IL+ G NGE N
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDG---LCDNGELN 472
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
ALD+ +M + ++ S+ +I+ L + G + LF +M KG + VT++ +I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G C G +L M PD T++ LI+ + +GK A + N M+ G P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
T+++++ C+E + EA ++FD + G P+ Y+ L++ Y KA+ + L+
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGR 237
E+ KG+ P+ +T+N LV G + G+
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGK 435
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE D +TL+ GF G + EA+ ++ RM ++ RP L ++ L L G
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+ G +P VT+ ++ C+ + L M + Y+I+I++
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G A+ N M G + + T+S+++ LC +G + K+ + I P+
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
++ L+D +VK ++ +A LY EM +G++PD +T+N L+ G K
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 10/188 (5%)
Query: 55 RLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCD 114
+LL G WKL G P ++TF+ ++ GFC + + +L+ M +
Sbjct: 120 KLLFAFSVLGRAWKL-------GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV 174
PD T + LIN C+KG+ S A+ ++ M++ G +P T+ +++ LC+ GN A +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 175 FDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
F ++++ I + Y+ ++D K A L+ EM KG+ D VT++ L+GG
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG--- 289
Query: 235 YGRNGEWN 242
+G+W+
Sbjct: 290 LCNDGKWD 297
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 103/232 (44%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
N E D + ++ + + A VL R +G P + L G
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
L M+ RP VT + +I G C + + L+ M ++G PD TY ++N
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
C G +++A+D M + + S+ +S ++ +LC++G+ +A +F+ ++ GI
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ Y++L+ G + + EM G+ + PD VTF+ L+ K G+
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E+ S L G +++ + +A+D+ M P+ L + R Y V
Sbjct: 33 EAKLSYKERLRNGIVDIK-VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLG 91
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
K M G T +MI +CR++ L+ S+L K G +PD T++ L+N +C
Sbjct: 92 FCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC 151
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
++G+ S A+ ++ M++ P + T ST+++ LC +G V EA + DR+ + G P+
Sbjct: 152 LEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 211
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y +++ K+ A L+ +M + + V ++I++ K G
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ GF G + A ++ M GV PS+ IL L G+ ++F+ M +
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+N++I G C + SL + G PD TYN++I C KG S
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A M ++GC P T++ ++ A +I + ++ + ++ G + +++ ++D
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 102 ESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHA 161
ES++ P P +N L +A + + + + M NG E M T + +++
Sbjct: 59 ESMIQSRPL----PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 114
Query: 162 LCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
CR+ ++ A V R +G P+T ++TL++G+ + +A L + M PD
Sbjct: 115 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 222 CVTFNILVGGHYKYGRNGE 240
VT + L+ G GR E
Sbjct: 175 LVTVSTLINGLCLKGRVSE 193
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 121/230 (52%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E D +L+ GF + EA+ ++++M ++G++P + T + L + G
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
LF M G RP V + ++ G C +SLL M K PD T+N LI+A+
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+GK A + N M++ P++ T++++++ C EG V EAR++F ++ G P+
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y +L++G+ K +++ A ++ EM KG++ + +T+ L+ G + G+
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 112/220 (50%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
++R L+ EALD+ M + PS+ T L ++ ++ + V L + G
Sbjct: 43 ILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
T N+++ FC+ + S L M K G +PD T+ LIN +C+ + AM
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+N M++ G +P + ++TI+ +LC+ G+V A +FD++++ GI P+ +Y +L++G
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ A+ L M + + PD +TFN L+ K G+
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D + T++ G + AL + +M + G+RP + T L L G +
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L + M ++ +P +TFN +I F ++ + E L + M + P+ FTY LIN +C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
++G A +M GC P + ++++++ C+ V +A K+F + G+ NT
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
Y TL+ G+ + + A ++ M +GV P+ T+N+L+
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 3/224 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + +L+ G N G +A +L M ++P + L ++ G + +L+
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELY 270
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M+R P+ T+ +I GFC + + + +LM GC PD Y LIN +C
Sbjct: 271 NEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K AM M + G + T++T++ + G A++VF + G+ PN Y
Sbjct: 331 KKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGK---GVSPDCVTFNILVGG 231
N L+ ++ +A M++E+M+ + GV+P+ T+N+L+ G
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D N L+ F+ G +A ++ + M + + P++ T L G +
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+F M KG P V + +I GFC+ + + + + M + G + TY LI +
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM---GIAP 185
GK +VA + + M+ G P++ T++ ++H LC G V +A +F+ +Q G+AP
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMR------------------------------- 214
N YN L+ G ++ +A M++E+MR
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 215 ----GKGVSPDCVTFNILVGGHYKYGRNGE 240
KGV P+ VT+ ++ G ++ G E
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHE 513
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 4/214 (1%)
Query: 22 FLNVGMIFEALDVLHRMRD----VGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
LNV + DV+ + D +GV L +L + M++ G
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P VTF +I GFC + S+++ M + G PD Y +I++ C G + A+
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ M G P + ++++++ LC G +A + + I P+ +N L+D +
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
VK + A LY EM ++P+ T+ L+ G
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 3/212 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D +L+ GF + +A+ + + M G+ + T L + +VG ++F
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF---GCDPDAFTYNILINAY 127
M+ +G P+ T+NV++ C + + M K G P+ +TYN+L++
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C GK A+ M K + + T++ I+ +C+ G V A +F + G+ PN
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
Y T++ G + +A++L+ +M+ GVS
Sbjct: 496 VTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 118/224 (52%), Gaps = 3/224 (1%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
++ D N ++ N G A +VL M+++G+ P + IL R GD +
Sbjct: 291 FQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+M+++G P+ T+N +I G + + E L+ + + G D+ TYNILIN Y
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G A + MM +G +P+ T++++++ LCR+ EA ++F+++ G+ P+
Sbjct: 408 CQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ NTLMDG+ + +A L +EM ++PD VT+N L+ G
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 39/268 (14%)
Query: 5 HNEYESDFSVL-NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
H+ E+ ++L + L+R + M+ EA++ + M++ G P + LL R+
Sbjct: 147 HDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRI 206
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+ W + DM R + + TFN+MI C++ L + L +M FG P TYN L
Sbjct: 207 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTL 266
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
+ + ++G+ A ++ M G +P M T++ I+ +C EG A +V ++++G+
Sbjct: 267 VQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGL 323
Query: 184 APNTT-----------------------------------IYNTLMDGYVKAREIGQANM 208
P++ YNTL+ G +I A +
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEI 383
Query: 209 LYEEMRGKGVSPDCVTFNILVGGHYKYG 236
L E+R KG+ D VT+NIL+ G+ ++G
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHG 411
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 1/229 (0%)
Query: 12 FSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
F NTL+ G I A ++ +R+ G+ IL + GD + L
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
+M+ G +P+ T+ +I CR+ + L + G PD N L++ +C G
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
A L M P T++ +M LC EG EAR++ ++ GI P+ YN
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
TL+ GY K + A M+ +EM G +P +T+N L+ G K + GE
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK-NQEGE 589
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+RG N G + A M G+ P+ L L + L +++
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG SVT+N++I G+C+ +L M G P FTY LI C K KT
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + ++ G +P + +T+M C GN+ A + + M I P+ YN LM
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
G + +A L EM+ +G+ PD +++N L+ G+ K G
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ G+ G +A + M G++P+ T L +L R +LF
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ ++ KG +P V N ++ G C + SLL M +PD TYN L+ C +
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK A + + M + G +P +++T++ ++G+ A V D + +G P Y
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
N L+ G K +E A L EM+ +G+ P+ +F
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 3/221 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL++GF G I A ++ M+ G +P + + + G V + K++
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI-- 321
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P SV++N++I G L + + M K G P +TYN LI+ ++ K
Sbjct: 322 -GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + + + G T++ +++ C+ G+ +A + D + GI P Y +L+
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ + +A+ L+E++ GKG+ PD V N L+ GH G
Sbjct: 441 VLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EA ++ ++ G++P L + L +G+ + L K+M P VT+N ++
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
G C + L+ M + G PD +YN LI+ Y KG T A + M+ G
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
P++ T++ ++ L + A ++ ++ GI PN + + ++++
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 5/214 (2%)
Query: 32 LDVLHRMRDVGVRPSLSAITILFRLLLRV--GDYGSVWKLFKDMLRKGPR---PSSVTFN 86
LD + + V LS+ + +LL V S+ LF +++ R S++ F+
Sbjct: 100 LDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFD 159
Query: 87 VMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN 146
+++ C+ + + +LM + G P T N ++ + A + M +
Sbjct: 160 LLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRM 219
Query: 147 GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQA 206
+ ++ TF+ +++ LC+EG + +A+ ++ GI P YNTL+ G+ I A
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 207 NMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++ EM+ KG PD T+N ++ GR E
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE 313
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
+W N F V + L +++GM+ EA+ +M+ V P + L ++
Sbjct: 181 LWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKL 240
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLH------LMPK---- 110
G V + FKDM+ G RP+ T+N+MI C++ + L L+P
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300
Query: 111 ------FG-------------------CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
FG C+PD TYN LIN +C GK + +++ M
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
NG +P++ ++ST++ A C+EG + +A K + ++ +G+ PN Y +L+D K +
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGG 231
A L EM GV + VT+ L+ G
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDG 446
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+TL+ F GM+ +A+ MR VG+ P+ T L ++G+ ++L +ML+
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G + VT+ +I G C + + E L M G P+ +YN LI+ +
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A++ LN + G +P + + T + LC + A+ V + +++ GI N+ IY TLMD
Sbjct: 491 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 550
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
Y K+ + L +EM+ + VTF +L+ G K
Sbjct: 551 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 108/222 (48%), Gaps = 1/222 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
L+ G + + EA ++ +M GV P+L++ L ++ + +L ++
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G +P + + I G C + + + +++ M + G ++ Y L++AY G +
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ-DMGIAPNTTIYNTLM 194
+ L+ M + E ++ TF ++ LC+ V +A F+RI D G+ N I+ ++
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
DG K ++ A L+E+M KG+ PD + L+ G++K G
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 35/254 (13%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ F +G + M G RP++ I+ + + GD + LF++M
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 76 KGPRPSSVTFNVM-----------------------------------ICGFCRQQGLVV 100
+G P +VT+N M I FC+ L +
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 101 GESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
G M G P+ +Y+ L++A+C +G A+ + M + G P+ T+++++
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
A C+ GN+ +A ++ + + +G+ N Y L+DG A + +A L+ +M GV P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 221 DCVTFNILVGGHYK 234
+ ++N L+ G K
Sbjct: 471 NLASYNALIHGFVK 484
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D N L+ F G + L+ M+ G++P++ + + L + G K
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ DM R G P+ T+ +I C+ L L + M + G + + TY LI+ C
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ A + M G P++A+++ ++H + N+ A ++ + ++ GI P+
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+Y T + G +I A ++ EM+ G+ + + + L+ ++K G E
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D + T + G ++ I A V++ M++ G++ + T L + G+
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK-FGCDPDAFTYNILINAY 127
L +M + VTF V+I G C+ + + + + FG +A + +I+
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C + A M++ G P ++++M ++GNV+EA + D++ ++G+ +
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 683
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y +L+ G ++ +A EEM G+G+ PD V ++ HY+ G
Sbjct: 684 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELG 732
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 71/130 (54%)
Query: 108 MPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGN 167
M +F P + N L++ + GKT + M+ G P++ T++ ++ +C+EG+
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 168 VIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
V AR +F+ ++ G+ P+T YN+++DG+ K + +EEM+ PD +T+N
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 228 LVGGHYKYGR 237
L+ K+G+
Sbjct: 338 LINCFCKFGK 347
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 113 CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEAR 172
C P ++ L + G A+ + M + P + + ++H + G + +
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 173 KVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+ F + G P YN ++D K ++ A L+EEM+ +G+ PD VT+N ++ G
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 233 YKYGR 237
K GR
Sbjct: 308 GKVGR 312
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 4/227 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D TLM G G + +AL ++ RM + G +P + I L ++ GD S L
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKM----GDTESALNLL 64
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M + V +N +I C+ + ++L M G PD TY+ +I+++C
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ + A L M++ P + TFS +++AL +EG V EA +++ + GI P T Y
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
N+++DG+ K + A + + M K SPD VTF+ L+ G+ K R
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 113/220 (51%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
T++ G +G AL++L +M + ++ + + L + G + LF +M K
Sbjct: 46 TIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK 105
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G P +T++ MI FCR E LL M + +PD T++ LINA +GK S A
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ M++ G P+ T+++++ C++ + +A+++ D + +P+ ++TL++G
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y KA+ + ++ EM +G+ + VT+ L+ G + G
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 103/204 (50%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + ++ F G +A +L M + + P + + L L++ G +++
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY 169
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
DMLR+G P+++T+N MI GFC+Q L + +L M C PD T++ LIN YC
Sbjct: 170 GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ M+ M + G + T++T++H C+ G++ A+ + + + G+APN +
Sbjct: 230 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITF 289
Query: 191 NTLMDGYVKAREIGQANMLYEEMR 214
+++ +E+ +A + E+++
Sbjct: 290 QSMLASLCSKKELRKAFAILEDLQ 313
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ N ++ G A ++ M D G+ P + + + R G + +L +DM
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ + P VTF+ +I ++ + E + M + G P TYN +I+ +C + +
Sbjct: 138 IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ A L+ M C P + TFST+++ C+ V ++F + GI NT Y TL
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ G+ + ++ A L M GV+P+ +TF ++
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
M+ G RP VTF ++ G C + ++ +L+ M + G P Y +IN C G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
T A++ L+ M + + + ++ I+ LC++G+ I A+ +F + D GI P+ Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++D + ++ A L +M + ++PD VTF+ L+ K G+ E
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSE 164
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+++ GF + +A +L M P + + L + + ++F +M R
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G ++VT+ +I GFC+ L + LL++M G P+ T+ ++ + C K +
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRK 304
Query: 136 AMDWLNMMMKN 146
A L + K+
Sbjct: 305 AFAILEDLQKS 315
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 117/230 (50%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
++ D +NTL+ G G EA+ ++ +M + G +P+ + ++ + G
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+L + M + + +V ++++I G C+ L +L + M G + TYNILI +
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G+ L M+K P++ TFS ++ + +EG + EA ++ + GIAP+T
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y +L+DG+ K + +AN + + M KG P+ TFNIL+ G+ K R
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 112/216 (51%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+ ++ G G + A ++ + M G+ ++ IL G + KL +DM++
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+ P+ VTF+V+I F ++ L E L M G PD TY LI+ +C +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A +++M+ GC+P++ TF+ +++ C+ + + ++F ++ G+ +T YNTL+
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
G+ + ++ A L++EM + V P+ VT+ IL+ G
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 35/256 (13%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ GF N G + +L M + P++ ++L ++ G +L K+M+
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK----- 130
+G P ++T+ +I GFC++ L ++ LM GCDP+ T+NILIN YC
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 131 ------------------------------GKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
GK +VA + M+ P++ T+ ++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
LC G +A ++F++I+ + + IYN ++ G A ++ A L+ + KGV P
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 221 DCVTFNILVGGHYKYG 236
T+NI++GG K G
Sbjct: 542 GVKTYNIMIGGLCKKG 557
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 115/224 (51%), Gaps = 4/224 (1%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
VLN + + G A+++L +M + ++ +I+ L + G + + LF +M
Sbjct: 234 VLNVMCKS----GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
KG + +T+N++I GFC G LL M K +P+ T+++LI+++ +GK
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A + M+ G P T+++++ C+E ++ +A ++ D + G PN +N L
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++GY KA I L+ +M +GV D VT+N L+ G + G+
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 107/207 (51%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
L + +M G+ +L ++I+ R + +++ G P+++TF+ +I
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN 166
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G C + + L+ M + G PD T N L+N C+ GK + AM ++ M++ GC+P
Sbjct: 167 GLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP 226
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
+ T+ +++ +C+ G A ++ ++++ I + Y+ ++DG K + A L+
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGR 237
EM KG++ + +T+NIL+GG GR
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGR 313
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 118/231 (51%), Gaps = 4/231 (1%)
Query: 10 SDFSVLNTLMRGFLNVGMI-FEALDVLHRMRD-VGVRPSLSAITI--LFRLLLRVGDYGS 65
S FS N R L G++ +A D + RD + RP + I LF + + Y
Sbjct: 47 SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
V L K M KG + T ++MI FCR + L + S + + K G +P+ T++ LIN
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN 166
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
C++G+ S A++ ++ M++ G +P + T +T+++ LC G EA + D++ + G P
Sbjct: 167 GLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQP 226
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N Y +++ K+ + A L +M + + D V ++I++ G K+G
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE + +TL+ G G + EAL+++ RM ++G +P L I L L G
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+ G +P++VT+ ++ C+ + LL M + DA Y+I+I+
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G A + N M G ++ T++ ++ C G + K+ + I PN
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
++ L+D +VK ++ +A L++EM +G++PD +T+ L+ G K
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
H D +L+ GF + +A ++ M G P++ IL +
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+LF+ M +G +VT+N +I GFC L V + L M P+ TY IL+
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
+ C G++ A++ + K+ E + ++ I+H +C V +A +F + G+
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
P YN ++ G K + +A +L+ +M G +PD T+NIL+ H G
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF+DM+ P P+ + F+ + + + + +L M G + +T +I+IN +C
Sbjct: 75 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
K +A + ++K G EP+ TFST+++ LC EG V EA ++ DR+ +MG P+
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
NTL++G + + +A +L ++M G P+ VT+ ++ K G+
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 102/221 (46%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ + N L+ G+ I + L++ +M GV L + +G +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF++M+ + P+ VT+ +++ G C + + K + D YNI+I+ C
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
K A D + G +P + T++ ++ LC++G + EA +F ++++ G AP+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
YN L+ ++ + ++ L EE++ G S D T +++
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
+D NTL++GF +G + A ++ M V P++ IL L G+ ++
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
F+ + + +N++I G C + L +P G P TYNI+I C
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT- 188
KG S A M ++G P T++ ++ A +G+ ++ K+ + ++ G + + +
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 615
Query: 189 ---IYNTLMDGYVK 199
+ + L DG +K
Sbjct: 616 IKMVIDMLSDGRLK 629
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 112/205 (54%)
Query: 32 LDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICG 91
L++ RM D GV+ ++ ++TI+ L R G+ KL K+ KG +P + T+N +I
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 92 FCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPS 151
+ +Q+ E +L +M K G + TY +L+ GK S A + M + G E
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 152 MATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYE 211
+ +++++ CR+GN+ A +FD + + G++P++ Y L+DG K E+G A +L
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMN 388
Query: 212 EMRGKGVSPDCVTFNILVGGHYKYG 236
EM+ KGV+ V FN L+ G+ + G
Sbjct: 389 EMQSKGVNITQVVFNTLIDGYCRKG 413
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 2/225 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
ESD V +L+ G + A + + + G+ PS L + +VG+ G+
Sbjct: 326 ESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEI 385
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLH-LMPKFGCDPDAFTYNILINAY 127
L +M KG + V FN +I G+CR+ G+V S+++ +M + G D FT N + + +
Sbjct: 386 LMNEMQSKGVNITQVVFNTLIDGYCRK-GMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+ A WL MM+ G + S +++ ++ C+EGNV EA+++F + G+ PN
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
YN ++ Y K +I +A L M G+ PD T+ L+ G
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGE 549
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V NTL+ G+ GM+ EA + M G + + + R+ Y + M
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ G + S+V++ +I +C++ + + L M G P+A TYN++I AYC +GK
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A M NG +P T+++++H C NV EA ++F + G+ N+ Y +
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
+ G KA + +A LY+EM+ KG + D + L+G +
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
LM + G + +A + MR+ G+ + T L R G+ + LF ++ KG
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
PSS T+ +I G C+ + E L++ M G + +N LI+ YC KG A
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
++M + G + + T +TI R EA++ R+ + G+ +T Y L+D Y
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
K + +A L+ EM KGV P+ +T+N+++ + K G+ E
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+++D NT+ F + EA L RM + GV+ S + T L + + G+
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAK 489
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+LF +M KG +P+++T+NVMI +C+Q + L M G DPD++TY LI+
Sbjct: 490 RLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGE 549
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
CI AM + M G + + T++ ++ L + G EA ++D ++ G +
Sbjct: 550 CIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDN 609
Query: 188 TIYNTLM 194
+Y L+
Sbjct: 610 KVYTALI 616
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
+D NTL+ G N G +A +L M + P++ T L ++ G+ L
Sbjct: 217 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 276
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
+K+M+R+ P+ T+N +I GFC L + + LM GC PD TYN LI +C
Sbjct: 277 YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
+ M M G T++T++H C+ G + A+KVF+R+ D G++P+
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
YN L+D +I +A ++ E+++ + D +T+NI++ G
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ NT++ G + AL+V + M G+R L L G + +L +DM
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+++ P+ + F +I F ++ L+ +L M + P+ FTYN LIN +CI G
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A ++M+ GC P + T++T++ C+ V + K+F + G+ + YNTL
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ GY +A ++ A ++ M GVSPD VT+NIL+
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
L+ F+ G + EA ++ M V P++ L G G +F M+
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
KG P VT+N +I GFC+ + + G L M G DAFTYN LI+ YC GK +
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
VA N M+ G P + T++ ++ LC G + +A + + +Q + + YN ++
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
G + ++ +A L+ + KGV PD + + ++ G + G E +
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%)
Query: 37 RMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQ 96
+M +G RPS+ + L + + L M G P+ V +N +I G C+ +
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 97 GLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFS 156
L + + M K G DA TYN LI+ G+ + A L M+K +P++ F+
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 157 TIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
++ +EGN++EAR ++ + + PN YN+L++G+ +G A +++ M K
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 217 GVSPDCVTFNILVGGHYKYGR 237
G PD VT+N L+ G K R
Sbjct: 319 GCFPDVVTYNTLITGFCKSKR 339
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 109/230 (47%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ L +L+ GF EA+ ++ M G P++ + L + D +
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++F M +KG R +VT+N +I G LL M K DP+ + LI+ +
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+G A + M++ P++ T++++++ C G + +A+ +FD + G P+
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YNTL+ G+ K++ + L+ EM +G+ D T+N L+ G+ + G+
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%)
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
+ + LF +ML+ P PS V F ++ + + L H M G D +++ I
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
LI+ +C + S+A+ L MMK G PS+ T ++++ C+ EA + D + G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
PN IYNT+++G K R++ A ++ M KG+ D VT+N L+ G GR
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+L+ GF G + +A + M G P + L + KLF +M
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G + T+N +I G+C+ L V + + + M G PD TYNIL++ C GK
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ + + K+ + + T++ I+ LCR + EA +F + G+ P+ Y T++
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
G + +A+ L M+ G P ++ + HY
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 1/189 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL+ GF + + + + M G+ L + G K+F
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M+ G P VT+N+++ C + ++ + K D D TYNI+I C
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K A + + G +P + T++ LCR+G EA K+ R+++ G P+ IY
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Query: 191 N-TLMDGYV 198
+ TL D Y
Sbjct: 503 DETLRDHYT 511
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%)
Query: 45 PSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESL 104
PS+ T + ++ ++ + V L+ M G +F ++I FCR L + +L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 105 LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR 164
L M K G P T L+N +C + A+ ++ M G P++ ++T+++ LC+
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 165 EGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVT 224
++ A +VF ++ GI + YNTL+ G + A L +M + + P+ +
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 225 FNILVGGHYKYG 236
F L+ K G
Sbjct: 257 FTALIDTFVKEG 268
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 115/232 (49%), Gaps = 1/232 (0%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
N+ + + N L+ GF + ++ V M D V+P++ + L L G
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+ M+ G +P+ +T+N +I GFC+ L + + G P YN+LI
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
+AYC GK M + G P + T++ ++ LCR GN+ A+K+FD++ G+
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL- 467
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
P+ ++ LM+GY + E +A ML +EM G+ P +T+NI++ G+ K G
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 2/214 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ GF M+ EALD+ ++ G P+ +L ++G + L ++M R
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G P T+N +I G CR + + L + G PD T++IL+ YC KG++
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRK 488
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ-DMGIAPNTTIYNTLM 194
A L M K G +P T++ +M C+EGN+ A + +++ + + N YN L+
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
GY + ++ ANML EM KG+ P+ +T+ I+
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 7/228 (3%)
Query: 16 NTLMRGFLNVG---MIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
NTL+ G+ +G +++A VL M + V P+L+ IL + + K+FK+
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 321
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
ML + +P+ +++N +I G C + S+ M G P+ TYN LIN +C
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
A+D + G P+ ++ ++ A C+ G + + + + ++ GI P+ YN
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
L+ G + I A L++++ KG+ PD VTF+IL+ G Y R GE
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEG---YCRKGE 485
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 5/193 (2%)
Query: 47 LSAITI--LFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESL 104
LSA++ L LL+ V ++K+M+R+ +P+ TFNV+I C+ + +
Sbjct: 186 LSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245
Query: 105 LHLMPKFGCDPDAFTYNILINAYCI---KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHA 161
+ M +GC P+ +YN LI+ YC GK A L M++N P++ TF+ ++
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305
Query: 162 LCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
++ N+ + KVF + D + PN YN+L++G +I +A + ++M GV P+
Sbjct: 306 FWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPN 365
Query: 222 CVTFNILVGGHYK 234
+T+N L+ G K
Sbjct: 366 LITYNALINGFCK 378
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 102/198 (51%), Gaps = 3/198 (1%)
Query: 43 VRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQG---LV 99
++P++ ++ L + G + +DM G P+ V++N +I G+C+ G +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 100 VGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIM 159
+++L M + P+ T+NILI+ + +M M+ +P++ ++++++
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 160 HALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
+ LC G + EA + D++ G+ PN YN L++G+ K + +A ++ ++G+G
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 220 PDCVTFNILVGGHYKYGR 237
P +N+L+ + K G+
Sbjct: 399 PTTRMYNMLIDAYCKLGK 416
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 115/236 (48%), Gaps = 10/236 (4%)
Query: 12 FSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL-- 69
+S + + + GF+ G + + H + + ++ +I+ +L+ S ++L
Sbjct: 117 YSKIRSFLDGFVRNGSDHQVHSIFHA---ISMCDNVCVNSIIADMLVLAYANNSRFELGF 173
Query: 70 --FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
FK G + S+++ ++ ++ E + M + P+ FT+N++INA
Sbjct: 174 EAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINAL 233
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR---EGNVIEARKVFDRIQDMGIA 184
C GK + A D + M GC P++ +++T++ C+ G + +A V + + ++
Sbjct: 234 CKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVS 293
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
PN T +N L+DG+ K + + +++EM + V P+ +++N L+ G G+ E
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISE 349
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ G G I A + ++ G+ P L IL R G+ L
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK-FGCDPDAFTYNILINAYCI 129
K+M + G +P +T+N+++ G+C++ L ++ M K + +YN+L+ Y
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNV 168
KGK A LN M++ G P+ T+ + + +G V
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 119/229 (51%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D ++L+ GF I +A+ V +M +G++ + TIL L + +
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ K M +G P+ VT++ +I G C+ L E LH M +P+ T++ LI+AY
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+GK S MM++ +P++ T+S++++ LC V EA K+ D + G PN
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y+TL +G+ K+ + L ++M +GV+ + V+ N L+ G+++ G+
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 112/211 (53%)
Query: 27 MIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFN 86
++ AL+VL RM+D G+ P++ + L L + G + +M K P+ +TF+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 87 VMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN 146
+I + ++ L +S+ +M + DP+ FTY+ LI C+ + A+ L++M+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 147 GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQA 206
GC P++ T+ST+ + + V + K+ D + G+A NT NTL+ GY +A +I A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 207 NMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++ M G+ P+ ++NI++ G + G
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGE 273
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%)
Query: 108 MPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGN 167
M K G +PD T + L+N +C+ A+ M K G + + + ++ LC+
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 168 VIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
V+ A +V R++D GI+PN Y++L+ G K+ + A EM K ++P+ +TF+
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 228 LVGGHYKYGR 237
L+ + K G+
Sbjct: 124 LIDAYAKRGK 133
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
++L+ G G + +A LH M + P++ + L + G V ++K M++
Sbjct: 87 SSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQ 146
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P+ T++ +I G C + +L LM GC P+ TY+ L N + +
Sbjct: 147 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
+ L+ M + G + + +T++ + G + A VF + G+ PN YN ++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
G E+ +A +E M+ D +T+ I++ G K
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCK 305
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%)
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
M++ G P VT + ++ GFC + + M K G D ILI+ C
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
A++ L M G P++ T+S+++ LC+ G + +A + + I PN ++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
L+D Y K ++ + + +Y+ M + P+ T++ L+ G + R E
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDE 171
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
+ L+ + G + + V M + + P++ + L L K+ M+
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
KG P+ VT++ + GF + + G LL MP+ G + + N LI Y GK
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
+A+ M NG P++ +++ ++ L G V +A F+ +Q + Y ++
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
G KA + +A L+ +++ K V PD + I++ + G E +
Sbjct: 301 HGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEAD 348
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 2/209 (0%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG-PRPSSVTFN-VMICG 91
+L+ ++G++P+ IL + + GD + + ++M R G P+S+T++ +M C
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 92 FCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPS 151
F + E ++ K G PD T+N++IN +C G+ A L+ M KNGC P+
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 152 MATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYE 211
+ +S +M+ C+ G + EA++ FD ++ G+ +T Y TLM+ + + E +A L
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 212 EMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
EM+ D +T+N+++ G GR+ E
Sbjct: 363 EMKASRCRADTLTYNVILRGLSSEGRSEE 391
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 3/234 (1%)
Query: 1 MWQNHN-EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVR-PSLSAITILFRLLL 58
++ HN + + + N L++ G I A V+ M+ G+ P+ + L L
Sbjct: 184 LYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLF 243
Query: 59 RVGDYGSVWKLFKDMLRK-GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDA 117
+LF+DM+ K G P VTFNVMI GFCR + + +L M K GC+P+
Sbjct: 244 AHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNV 303
Query: 118 FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR 177
+ Y+ L+N +C GK A + + K G + ++T+M+ CR G EA K+
Sbjct: 304 YNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGE 363
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
++ +T YN ++ G +A + ++ +GV + ++ I++
Sbjct: 364 MKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNA 417
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N ++ GF G + A +L M+ G P++ + L +VG + F
Sbjct: 267 DPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTF 326
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++ + G + +V + ++ FCR LL M C D TYN+++ +
Sbjct: 327 DEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSE 386
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G++ A+ L+ G + ++ I++ALC G + +A K + + GI P+ +
Sbjct: 387 GRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATW 446
Query: 191 NTLM 194
N L+
Sbjct: 447 NELV 450
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 6/191 (3%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+ LM GF VG I EA ++ G++ T L R G+ KL +M
Sbjct: 307 SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKA 366
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDP---DAFTYNILINAYCIKGK 132
R ++T+NV++ G + E L ++ ++G + + +Y I++NA C G+
Sbjct: 367 SRCRADTLTYNVILRGLSSEGR---SEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGE 423
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
A+ +L++M + G P AT++ ++ LC G +V +G+ P +
Sbjct: 424 LEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGA 483
Query: 193 LMDGYVKAREI 203
+++ K R++
Sbjct: 484 VVESICKERKL 494
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 56 LLLRVGDYGSVWKLF-KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCD 114
L+ R D V +F K +KG ++ T++V++ R + + +++LH M C
Sbjct: 62 LMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCR 121
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG-CEPSMATFSTIMHALCREGNVIEARK 173
+ L+ + M+ N++ +PS+ ST ++ L G V +RK
Sbjct: 122 FQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRK 181
Query: 174 VFDRIQ-DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS-PDCVTFNILVGG 231
+ + ++G+ PNT I+N L+ + K +I A ++ EEM+ G+S P+ +T++ L+
Sbjct: 182 LLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDC 241
Query: 232 HYKYGRNGE 240
+ + R+ E
Sbjct: 242 LFAHSRSKE 250
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 121/261 (46%), Gaps = 35/261 (13%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL+ + + G++ EA ++++ M G P + + L + G Y ++F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLH------LMPKFGC----------- 113
+MLR G P S T+ ++ C++ +V E + ++P C
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 114 ------------------DPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
PD Y ILI YC KG SVAM+ N M++ GC + T+
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+TI+H LC+ + EA K+F+ + + + P++ L+DG+ K + A L+++M+
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 216 KGVSPDCVTFNILVGGHYKYG 236
K + D VT+N L+ G K G
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVG 529
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 116/227 (51%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
S+ SV + L+R ++ + EA + +R G S+ A L L+R+G W +
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
++++ R G + T N+M+ C+ + + L + + G PD TYN LI+AY
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
KG A + +N M G P + T++T+++ LC+ G A++VF + G++P++T
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y +L+ K ++ + ++ +MR + V PD V F+ ++ + G
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 107/213 (50%), Gaps = 2/213 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL+ GF VG I A ++ M + P+ + +IL L G ++++
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M+ K +P+ + N MI G+CR GES L M G PD +YN LI + +
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 131 GKTSVAMDWLNMMMKN--GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
S A + M + G P + T+++I+H CR+ + EA V ++ + G+ P+ +
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
Y +++G+V + +A +++EM +G SPD
Sbjct: 694 TYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 108/221 (48%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ + +G + A V + GV ++ + I+ L + G V +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P VT+N +I + + + L++ MP G P +TYN +IN C GK
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + M+++G P T+ +++ C++G+V+E KVF ++ + P+ ++++M
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ ++ + +A M + ++ G+ PD V + IL+ G+ + G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L++G+ GMI A+++ + M G + + L + G KLF
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M + P S T ++I G C+ L L M + D TYN L++ +
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 131 GKTSVAMD-WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G A + W +M+ K P+ ++S +++ALC +G++ EA +V+D + I P I
Sbjct: 529 GDIDTAKEIWADMVSKE-ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
N+++ GY ++ E+M +G PDC+++N L+ G
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D L L+ G +G + A+++ +M++ +R + L +VGD + +++
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
DM+ K P+ +++++++ C + L + M P N +I YC
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM--GIAPNTT 188
G S +L M+ G P +++T+++ RE N+ +A + ++++ G+ P+
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
YN+++ G+ + ++ +A ++ +M +GV+PD T+ ++ G
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
LN ++ G + + L ++++ GV P + L G ++L M
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
KG P T+N +I G C+ + + M + G PD+ TY L+ C KG
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ M P + FS++M R GN+ +A F+ +++ G+ P+ IY L
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
+ GY + I A L EM +G + D VT+N ++ G K GE +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%)
Query: 85 FNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMM 144
F+++I + + + L L+ G N LI + G +A +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 145 KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIG 204
++G ++ T + +++ALC++G + + ++Q+ G+ P+ YNTL+ Y +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 205 QANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+A L M GKG SP T+N ++ G K+G+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 111/213 (52%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ G L V + +AL++ M +GV+P+ + + GD S + F+ M
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P+ V N + + + + + + G PD+ TYN+++ Y G+
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ L+ MM+NGCEP + +++++ L + V EA K+F R+++M + P YNTL+
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
G K +I +A L+E M KG P+ +TFN L
Sbjct: 582 GLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%)
Query: 37 RMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQ 96
M G P + TIL L + G++G + M +G P+ T+N +ICG R
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 97 GLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFS 156
L L M G P A+TY + I+ Y G + A++ M G P++ +
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 157 TIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
+++L + G EA+++F ++D+G+ P++ YN +M Y K EI +A L EM
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 217 GVSPDCVTFNILVGGHYKYGRNGE 240
G PD + N L+ YK R E
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDE 556
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 3/233 (1%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ ++LM G I + +L M +G++P++ TI R+L R G +
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++ K M +G P VT+ V+I C + L + + M PD TY L++ +
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+ + M K+G P + TF+ ++ ALC+ GN EA D ++D GI PN
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
YNTL+ G ++ + A L+ M GV P T+ + + YG++G+
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFID---YYGKSGD 448
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 2/221 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + N L+ + G I E ++ M + I+ L++ G+ L+
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 71 KDMLR-KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
D++ + P++ T+ +I G + L + L M +GC P+ YNILIN +
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G+ A M+K G P + T+S ++ LC G V E F +++ G+ P+
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 190 YNTLMDGYVKAREIGQANMLYEEMR-GKGVSPDCVTFNILV 229
YN +++G K+ + +A +L+ EM+ +G++PD T+N L+
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
T+ + G + +A L +MR+ G + + L LLL+ ++++ M+ +
Sbjct: 158 TIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE 217
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G RPS T++ ++ G +++ + LL M G P+ +T+ I I GK + A
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ L M GC P + T++ ++ ALC + A++VF++++ P+ Y TL+D
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ R++ + EM G PD VTF ILV K G GE
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 381
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%)
Query: 25 VGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVT 84
G I EA ++L RM D G P + T+L L ++F+ M +P VT
Sbjct: 271 AGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVT 330
Query: 85 FNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMM 144
+ ++ F + L + M K G PD T+ IL++A C G A D L++M
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMR 390
Query: 145 KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIG 204
G P++ T++T++ L R + +A ++F ++ +G+ P Y +D Y K+ +
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV 450
Query: 205 QANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
A +E+M+ KG++P+ V N + K GR+ E
Sbjct: 451 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N +M+ + VG I EA+ +L M + G P + + L L + WK+F
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M +P+ VT+N ++ G + + L M + GC P+ T+N L + C
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ ++A+ L MM GC P + T++TI+ L + G V EA F +++ + + P+
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTL 680
Query: 191 NTLMDGYVKAREIGQA-----NMLY 210
TL+ G VKA I A N LY
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFLY 705
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 116/234 (49%), Gaps = 2/234 (0%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHR-MRDVGVRPSLSAITILFRLLLRVGDYG 64
+E E++ N ++ G + G + +ALD+ + M D P+ L L + G
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+LF+ ML G RP+ +N++I GF + +L M K G PD TY++L+
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ-DMGI 183
+ C+ G+ + + + ++G P + ++ I++ L + + EA +F+ ++ GI
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
P+ YN+L+ A + +A +Y E++ G+ P+ TFN L+ G+ G+
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ G G ++EA + M D G RP+ + IL + G+ + LFK M+++G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
RP T++V++ C + G + + G +PD YN++IN + A+
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 138 DWLN-MMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
N M G P + T+++++ L G V EA K+++ IQ G+ PN +N L+ G
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
Y + + A +Y+ M G SP+ T+ L
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Query: 39 RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGL 98
+D+GV+P L +L LL +F + G P T+N ++ + + +
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 99 VVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD-WLNMMMKNGCEPSMATFST 157
L M C+ + T+NI+I+ G A+D + ++M P+ T+
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 158 IMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
++ L + G + EA+++F+ + D G PN IYN L++G+ KA E A L++ M +G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 218 VSPDCVTFNILVGGHYKYGRNGE 240
V PD T+++LV GR E
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDE 979
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 1/223 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G L MI A DV +++ G P ++ L + G +++L+K+M
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLH-LMPKFGCDPDAFTYNILINAYCIKGKTS 134
+++T N++I G + + L + LM P A TY LI+ G+
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A M+ GC P+ A ++ +++ + G A +F R+ G+ P+ Y+ L+
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
D + + ++E++ G++PD V +N+++ G K R
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 2/218 (0%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
N E D V+N+L+ + EA + RM+++ ++P++ L L + G
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+LF+ M++KG P+++TFN + C+ + + +L M GC PD FTYN +I
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR-IQDMGI 183
G+ AM + + MK P T T++ + + + +A K+ + +
Sbjct: 651 FGLVKNGQVKEAMCFFH-QMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCAD 709
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
P + L+ + I A E + G+ D
Sbjct: 710 QPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD 747
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 4/200 (2%)
Query: 44 RPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK-GPRPSSVTFNVMICGFCRQQGLVVGE 102
+P LS+ + R L D S + FK + ++ T N M+ L
Sbjct: 79 KPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMA 138
Query: 103 SLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
+ LM K D TY + + +KG A L M + G + +++ ++H L
Sbjct: 139 YVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLL 198
Query: 163 CREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDC 222
+ EA +V+ R+ G P+ Y++LM G K R+I L +EM G+ P+
Sbjct: 199 LKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNV 258
Query: 223 VTFNILVGGHYKYGRNGEWN 242
TF I + GR G+ N
Sbjct: 259 YTFTICI---RVLGRAGKIN 275
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 118/230 (51%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E D +L+ G+ + I +A+ + ++ +G +P++ T L R L +
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+LF M G RP+ VT+N ++ G C LL M K +P+ T+ LI+A+
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
GK A + N+M++ P + T+ ++++ LC G + EAR++F ++ G PN
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
IY TL+ G+ K++ + ++ EM KGV + +T+ +L+ G+ GR
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
++ + TL+R + A+++ ++M G RP++ L L +G +G
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L +DM+++ P+ +TF +I F + L+ + L ++M + PD FTY LIN
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C+ G A +M +NGC P+ ++T++H C+ V + K+F + G+ NT
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
Y L+ GY A ++ +M + PD T+N+L+ G
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E + L+ F+ VG + EA ++ + M + V P + L L G +
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+F M R G P+ V + +I GFC+ + + G + + M + G + TY +LI YC
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ G+ VA + N M P + T++ ++ LC G V +A +F+ ++ + N
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y ++ G K ++ A L+ + KG+ P+ +T+ ++ G + G
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%)
Query: 12 FSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
FS ++R L+ +ALD+ RM PS+ T L ++ ++ Y V LF+
Sbjct: 48 FSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFE 107
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
M G P T N+++ C L M K G +PD T+ L+N YC
Sbjct: 108 QMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN 167
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
+ A+ + ++ G +P++ T++T++ LC+ ++ A ++F+++ G PN YN
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
L+ G + G A L +M + + P+ +TF L+ K G+
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 54 FRLLLRVG----DYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMP 109
+R +LR G + LF M+ P PS + F ++ + V SL M
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 110 KFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVI 169
G P T NI+++ C+ + A +L MMK G EP + TF+++++ C +
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 170 EARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+A +FD+I MG PN Y TL+ K R + A L+ +M G P+ VT+N LV
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 230 GGHYKYGRNGE 240
G + GR G+
Sbjct: 231 TGLCEIGRWGD 241
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D +L+ G G++ EA + + M G P+ T L + K+F
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M +KG +++T+ V+I G+C V + + + M PD TYN+L++ C
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK A+ M K + ++ T++ I+ +C+ G V +A +F + G+ PN Y
Sbjct: 412 GKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITY 471
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
T++ G+ + I +A+ L+++M+ G P+
Sbjct: 472 TTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
+ + +M+ +G+ P L I+ + M++ G P VTF ++
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN 161
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G+C + +L + G P+ TY LI C + A++ N M NG P
Sbjct: 162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRP 221
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
++ T++ ++ LC G +A + + I PN + L+D +VK ++ +A LY
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYG 236
M V PD T+ L+ G YG
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYG 307
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ TL+ GF + + + + + M GV + T+L + VG ++F M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ P T+NV++ G C + + M K D + TY I+I C GK
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
A D + G +P++ T++T++ CR G + EA +F ++++ G PN ++Y
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ G G + +AL + MR + ++ TI+ + + ++G + LF
Sbjct: 397 DIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYN 121
+ KG +P+ +T+ MI GFCR+ + +SL M + G P+ Y
Sbjct: 457 CSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 114/230 (49%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NT+++G+ G +A++ L M G + + D+GS L+
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++M KG + F+++I G C++ L G ++ M + G P+ Y +LI+ Y
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G A+ L+ M+ G +P + T+S +++ LC+ G V EA F + G+A N+ Y
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++L+DG KA + +A L+EEM KG + D +N L+ K+ + E
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDE 485
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 107/234 (45%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
E+ S N L++ F +GM+ E L V +M++ G+ P+L L L+ S
Sbjct: 182 EFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA 241
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
++F+ M +P VT+N MI G+C+ L M G + D TY +I A
Sbjct: 242 ERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQA 301
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
+ M + G + FS ++ LC+EG + E VF+ + G PN
Sbjct: 302 CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPN 361
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
IY L+DGY K+ + A L M +G PD VT++++V G K GR E
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
M + G++ A +++ L + G + +F++M+RKG +P+ + V+I G+ +
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ LLH M G PD TY++++N C G+ A+D+ + +G + +
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM-R 214
S+++ L + G V EA ++F+ + + G ++ YN L+D + K R++ +A L++ M
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Query: 215 GKGVSPDCVTFNILVGGHYKYGRNGE 240
+G T+ IL+ G +K RN E
Sbjct: 496 EEGCDQTVYTYTILLSGMFKEHRNEE 521
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 1/219 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
+ ++ L+ G+ G + +A+ +LHRM D G +P + +++ L + G F
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
G +S+ ++ +I G + + E L M + GC D++ YN LI+A+
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480
Query: 131 GKTSVAMDWLNMM-MKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
K A+ M + GC+ ++ T++ ++ + +E EA K++D + D GI P
Sbjct: 481 RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAAC 540
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
+ L G + ++ +A + +E+ GV D +++
Sbjct: 541 FRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI 579
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
++ D + ++ G G + EALD H R G+ + + L L + G
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF-GCDPDAFTYNILINA 126
+LF++M KG S +N +I F + + + +L M + GCD +TY IL++
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
+ + A+ +MM+ G P+ A F + LC G V A K+ D + MG+ +
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
+ +++ KA I +A L + + +G
Sbjct: 573 AACED-MINTLCKAGRIKEACKLADGITERG 602
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E + V N L+ G + + EA L M G RP++ + IL L + G +G
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
K+ML G +P T+++++CG CR + + + L H + G + D +NILI+ C
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK AM + M C ++ T++T+M + G+ A ++ + MG+ P+
Sbjct: 581 SVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDII 640
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
YNT+M G R + A +++ R G+ P T+NILV
Sbjct: 641 SYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EA +++ M GV + L L+R G ++M + G RP+ V++N++I
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILI 506
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
CG C+ + + M + G PD TY+IL+ C K +A++ + +++G E
Sbjct: 507 CGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLE 566
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
+ + ++H LC G + +A V ++ N YNTLM+G+ K + +A ++
Sbjct: 567 TDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVI 626
Query: 210 YEEMRGKGVSPDCVTFNILVGG 231
+ M G+ PD +++N ++ G
Sbjct: 627 WGYMYKMGLQPDIISYNTIMKG 648
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 89/162 (54%), Gaps = 1/162 (0%)
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G P+ ++N ++ F + V ESL G P+ TYN+LI C K + A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+L+ M K G +P + ++ST+++ L + G + +A ++FD + + G+AP+ T YN L+DG
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 197 YVKAREIGQANMLYEE-MRGKGVSPDCVTFNILVGGHYKYGR 237
++K ++ A L++ + V P+ T NI++ G K GR
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGR 270
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 2/228 (0%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLLRVGDYG 64
E + D V ++++ + M +ALDV RMR++ G P++ + L + +
Sbjct: 72 QECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWV 131
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
V LF G P+ T+NV+I C+++ L M K G PD F+Y+ +I
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVI 191
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR-IQDMGI 183
N GK A++ + M + G P + ++ ++ +E + A +++DR ++D +
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
PN +N ++ G K + ++E M+ D T++ L+ G
Sbjct: 252 YPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 3/242 (1%)
Query: 1 MWQ--NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLL 58
+W+ NE E D ++L+ G + G + +A V + + + + +
Sbjct: 277 IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC 336
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
R G +L++ M K + V++N++I G + + LMP G D
Sbjct: 337 RCGKIKESLELWRIMEHKNS-VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKT 395
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
TY I I+ C+ G + A+ + + +G + +++I+ LC++ + EA + +
Sbjct: 396 TYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
G+ N+ + N L+ G ++ +G+A+ EM G P V++NIL+ G K G+
Sbjct: 456 SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKF 515
Query: 239 GE 240
GE
Sbjct: 516 GE 517
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y +D + + G G + +AL V+ + G + A + L +
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEAS 449
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L K+M + G +S N +I G R L L M K GC P +YNILI
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGL 509
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C GK A ++ M++NG +P + T+S ++ LCR+ + A +++ + G+ +
Sbjct: 510 CKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDV 569
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
++N L+ G ++ A + M + + + VT+N L+ G +K G
Sbjct: 570 MMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Query: 42 GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVG 101
G +P + + + + L + G +LF +M +G P +N++I GF +++
Sbjct: 179 GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA 238
Query: 102 ESLL-HLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
L L+ P+ T+NI+I+ G+ + M +N E + T+S+++H
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
LC GNV +A VF+ + + + + YNT++ G+ + +I ++ L+ M K S
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SV 357
Query: 221 DCVTFNILVGGHYKYGRNGE 240
+ V++NIL+ G + G+ E
Sbjct: 358 NIVSYNILIKGLLENGKIDE 377
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L++G L G I EA + M G + I L G + +++
Sbjct: 363 NILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G + +I C+++ L +L+ M K G + ++ N LI +
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A +L M KNGC P++ +++ ++ LC+ G EA + + G P+ Y+ L+
Sbjct: 483 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 542
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
G + R+I A L+ + G+ D + NIL+ G G+
Sbjct: 543 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 104/265 (39%), Gaps = 35/265 (13%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRM-RDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
D + N L+ GFL A+++ R+ D V P++ I+ L + G K+
Sbjct: 218 DVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
++ M + T++ +I G C + ES+ + + + D TYN ++ +C
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 130 KGKTSVAMD-WLNMMMKN---------------------------------GCEPSMATF 155
GK +++ W M KN G T+
Sbjct: 338 CGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTY 397
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+H LC G V +A V ++ G + Y +++D K + + +A+ L +EM
Sbjct: 398 GIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSK 457
Query: 216 KGVSPDCVTFNILVGGHYKYGRNGE 240
GV + N L+GG + R GE
Sbjct: 458 HGVELNSHVCNALIGGLIRDSRLGE 482
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E+D + N L+ G +VG + +A+ V+ M +L L +VGD
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATV 625
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
++ M + G +P +++N ++ G C +G+ G P +T+NIL+ A
Sbjct: 626 IWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Query: 39 RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGL 98
R G + T + L R +G++ KL +M+R G +P++VT+N +I + R L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 99 VVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
++ + M + GC PD TY LI+ + G +AMD M G P T+S I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
++ L + G++ A K+F + D G PN YN +MD + KAR A LY +M+ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 219 SPDCVTFNIL--VGGHYKYGRNGE 240
PD VT++I+ V GH Y E
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAE 559
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ + + EA++V ++M++ G +P L + + G +++ M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P + T++V+I + L L M GC P+ TYNI+++ +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ M G EP T+S +M L G + EA VF +Q P+ +Y L+D
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ KA + +A Y+ M G+ P+ T N L+
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 5/209 (2%)
Query: 21 GFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRP 80
GFL++ A+D+ RM+ G+ P +++ L + G + KLF +M+ +G P
Sbjct: 448 GFLDI-----AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 81 SSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL 140
+ VT+N+M+ + + L M G +PD TY+I++ G A
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 141 NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKA 200
M + P + ++ + GNV +A + + + G+ PN N+L+ +++
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 201 REIGQANMLYEEMRGKGVSPDCVTFNILV 229
+I +A L + M G+ P T+ +L+
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 4/218 (1%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E D + +M + G + EA V M+ P +L L + G+ W
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ ++ ML G RP+ T N ++ F R + LL M G P TY +L++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC- 653
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVI--EARKVFDRIQDMGIAP 185
C G++ + M + +M + P+ F M A +G + A D +
Sbjct: 654 CTDGRSKLDMGFCGQLMASTGHPAH-MFLLKMPAAGPDGENVRNHANNFLDLMHSEDRES 712
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCV 223
+ + ++D K+ + +A ++E K V PD +
Sbjct: 713 KRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Query: 39 RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGL 98
R G + T + L R +G++ KL +M+R G +P++VT+N +I + R L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 99 VVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
++ + M + GC PD TY LI+ + G +AMD M G P T+S I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
++ L + G++ A K+F + D G PN YN +MD + KAR A LY +M+ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 219 SPDCVTFNIL--VGGHYKYGRNGE 240
PD VT++I+ V GH Y E
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAE 559
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ + + EA++V ++M++ G +P L + + G +++ M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P + T++V+I + L L M GC P+ TYNI+++ +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ M G EP T+S +M L G + EA VF +Q P+ +Y L+D
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ KA + +A Y+ M G+ P+ T N L+
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 5/209 (2%)
Query: 21 GFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRP 80
GFL++ A+D+ RM+ G+ P +++ L + G + KLF +M+ +G P
Sbjct: 448 GFLDI-----AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 81 SSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL 140
+ VT+N+M+ + + L M G +PD TY+I++ G A
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 141 NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKA 200
M + P + ++ + GNV +A + + + G+ PN N+L+ +++
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 201 REIGQANMLYEEMRGKGVSPDCVTFNILV 229
+I +A L + M G+ P T+ +L+
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 4/218 (1%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E D + +M + G + EA V M+ P +L L + G+ W
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ ++ ML G RP+ T N ++ F R + LL M G P TY +L++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC- 653
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVI--EARKVFDRIQDMGIAP 185
C G++ + M + +M + P+ F M A +G + A D +
Sbjct: 654 CTDGRSKLDMGFCGQLMASTGHPAH-MFLLKMPAAGPDGENVRNHANNFLDLMHSEDRES 712
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCV 223
+ + ++D K+ + +A ++E K V PD +
Sbjct: 713 KRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Query: 39 RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGL 98
R G + T + L R +G++ KL +M+R G +P++VT+N +I + R L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 99 VVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
++ + M + GC PD TY LI+ + G +AMD M G P T+S I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
++ L + G++ A K+F + D G PN YN +MD + KAR A LY +M+ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 219 SPDCVTFNIL--VGGHYKYGRNGE 240
PD VT++I+ V GH Y E
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAE 559
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ + + EA++V ++M++ G +P L + + G +++ M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P + T++V+I + L L M GC P+ TYNI+++ +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ M G EP T+S +M L G + EA VF +Q P+ +Y L+D
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ KA + +A Y+ M G+ P+ T N L+ + + E
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 5/209 (2%)
Query: 21 GFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRP 80
GFL++ A+D+ RM+ G+ P +++ L + G + KLF +M+ +G P
Sbjct: 448 GFLDI-----AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 81 SSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL 140
+ VT+N+M+ + + L M G +PD TY+I++ G A
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 141 NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKA 200
M + P + ++ + GNV +A + + + G+ PN N+L+ +++
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 201 REIGQANMLYEEMRGKGVSPDCVTFNILV 229
+I +A L + M G+ P T+ +L+
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 4/218 (1%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E D + +M + G + EA V M+ P +L L + G+ W
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ ++ ML G RP+ T N ++ F R + LL M G P TY +L++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC- 653
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVI--EARKVFDRIQDMGIAP 185
C G++ + M + +M + P+ F M A +G + A D +
Sbjct: 654 CTDGRSKLDMGFCGQLMASTGHPAH-MFLLKMPAAGPDGENVRNHANNFLDLMHSEDRES 712
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCV 223
+ + ++D K+ + +A ++E K V PD +
Sbjct: 713 KRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 35/270 (12%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+++D + TL+RGF G + +L M + P + A + L ++ G
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+L K+M+++G P +VT+ +I GFC++ L +L LM GC P+ T+NILIN Y
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 128 CIK-----------------------------------GKTSVAMDWLNMMMKNGCEPSM 152
C GK VA + M+ P +
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
++ ++ LC G +A ++F++I+ + + IYN ++ G A ++ A L+
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Query: 213 MRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
+ KGV PD T+NI++GG K G E +
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 110/216 (50%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+ ++ G G + A ++ + M G + + T L R G + KL +DM++
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+ P V F+ +I F ++ L E L M + G PD TY LI+ +C + +
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A L++M+ GC P++ TF+ +++ C+ + + ++F ++ G+ +T YNTL+
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
G+ + ++ A L++EM + V PD V++ IL+ G
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
LN L+ G G + +A+ ++ RM + G +P+ + +++ + G +L + M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ + +V ++++I G C+ L +L + M G D Y LI +C G+
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
L M+K P + FS ++ +EG + EA ++ + GI+P+T Y +L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+DG+ K ++ +AN + + M KG P+ TFNIL+ G+ K
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A+D+ M RP L + LF ++ R Y V L K M KG + T ++MI
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
CR + L + S + + K G +PD T++ LIN C++G+ S A++ ++ M++ G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P++ T + +++ LC G V +A + DR+ + G PN Y ++ K+ + A L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYG 236
+M + + D V ++I++ G K G
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDG 261
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 112/235 (47%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE D +TL+ G G + EAL+++ RM ++G +P+L + L L G
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+ G +P+ VT+ ++ C+ + LL M + DA Y+I+I+
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G A + N M G + + ++T++ C G + K+ + I P+
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
++ L+D +VK ++ +A L++EM +G+SPD VT+ L+ G K + + N
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D +L+ GF + +A +L M G P++ IL + +LF
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ M +G +VT+N +I GFC L V + L M PD +Y IL++ C
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ A++ + K+ E + ++ I+H +C V +A +F + G+ P+ Y
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N ++ G K + +A++L+ +M G SP+ T+NIL+ H G
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A+++L +M + ++ +I+ L + G + + LF +M KG + + + +I
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
GFC G LL M K PD ++ LI+ + +GK A + M++ G P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
T+++++ C+E + +A + D + G PN +N L++GY KA I L+
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGR 237
+M +GV D VT+N L+ G + G+
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGK 437
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
LD+ +M G+ +L ++I+ R + +++ G P +VTF+ +I
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G C + + L+ M + G P T N L+N C+ GK S A+ ++ M++ G +P
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
+ T+ ++ +C+ G A ++ ++++ I + Y+ ++DG K + A L+
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGR 237
EM KG D + + L+ G GR
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGR 297
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A + ++ +G P + L L G +L M+ G +P+ +T N ++
Sbjct: 126 AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN 185
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G C + L+ M + G P+ TY ++ C G+T++AM+ L M + +
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
+S I+ LC++G++ A +F+ ++ G + IY TL+ G+ A L
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGR 237
+M + ++PD V F+ L+ K G+
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGK 332
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
+ N L+ G+ +I + L++ +M GV L + +G +LF
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++M+ + RP V++ +++ G C + + K + D YNI+I+ C
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K A D + G +P + T++ ++ LC++G++ EA +F ++++ G +PN Y
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
N L+ ++ + ++ L EE++ G S D T ++V
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
+D NTL++GF +G + A ++ M VRP + + IL L G+ ++
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
F+ + + +N++I G C + L +P G PD TYNI+I C
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT- 188
KG S A M ++G P+ T++ ++ A EG+ ++ K+ + I+ G + + +
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Query: 189 ---IYNTLMDGYVK 199
+ + L DG +K
Sbjct: 600 VKMVVDMLSDGRLK 613
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 112/220 (50%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
T+++G + G + A +++ M G RP++ T L + L+ +G ++ K+M +
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G P +N +I G + + + S L M + G P+AFTY I+ Y + + A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
++ M + G P+ + +++ C++G VIEA + + D GI + Y LM+G
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
K ++ A ++ EMRGKG++PD ++ +L+ G K G
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 1/221 (0%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ + G + EA M D G+ T+L L + ++F++M KG
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P ++ V+I GF + + S+ M + G P+ YN+L+ +C G+ A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ L+ M G P+ T+ TI+ C+ G++ EA ++FD ++ G+ P++ +Y TL+DG
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
+ ++ +A ++ + KG + FN L+ +K+G+
Sbjct: 743 CRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKT 782
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+ G++ A + MR+ GV P+ T L + G ++ M+ +
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G + T+ V++ G + + E + M G PD F+Y +LIN + G A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ M++ G P++ ++ ++ CR G + +A+++ D + G+ PN Y T++DG
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
Y K+ ++ +A L++EM+ KG+ PD + LV G
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+L+ G + EA L M + G++P+ + ++ S K
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K+M G P+ V +I +C++ ++ S M G DA TY +L+N
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K A + M G P + ++ +++ + GN+ +A +FD + + G+ PN IY
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
N L+ G+ ++ EI +A L +EM KG+ P+ VT+ ++ G+ K G E
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 5/227 (2%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ N L+ GF G I +A ++L M G+ P+ + + GD ++LF +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
KG P S + ++ G CR + ++ K GC +N LIN GKT
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKT 782
Query: 134 SVAMDWLNMMMKNGCE----PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
+ + LN +M + P+ T++ ++ LC+EGN+ A+++F ++Q+ + P
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y +L++GY K + +++E G+ PD + +++++ K G
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 38/268 (14%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D LM G + +A ++ MR G+ P + + +L ++G+ +F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M+ +G P+ + +N+++ GFCR + + LL M G P+A TY +I+ YC
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF--------------- 175
G + A + M G P ++T++ CR +V A +F
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFN 770
Query: 176 -------------------DRIQDMGI----APNTTIYNTLMDGYVKAREIGQANMLYEE 212
+R+ D PN YN ++D K + A L+ +
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 213 MRGKGVSPDCVTFNILVGGHYKYGRNGE 240
M+ + P +T+ L+ G+ K GR E
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAE 858
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 81/164 (49%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF M+ G P + + +I G+CR++ + G LL M K +TY ++ C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G A + + M+ +GC P++ ++T++ + +A +V +++ GIAP+
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
YN+L+ G KA+ + +A EM G+ P+ T+ + G+
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+ L+ G + + +A +L M +GV ++L LL+ + + L +M+
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G ++ IC ++ + ++L M G P A Y LI YC +
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
+ L M K S T+ T++ +C G++ A + + G PN IY TL+
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+++ G A + +EM+ +G++PD +N L+ G K R E
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G++ +A + M G+ P A L R + ++L +M ++ S T+
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
++ G C L +++ M GC P+ Y LI + + AM L M +
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
G P + +++++ L + + EAR + + G+ PN Y + GY++A E
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
A+ +EMR GV P+ V L+ + K G+
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
KL + M+ KG P T++V+I G C+ + L +SLL M G D TY++LI+
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322
Query: 128 CIKGKTSVAMDWL-NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
+KG+ + A L + M+ +G + + + +EG + +A+ +FD + G+ P
Sbjct: 323 -LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR-NGEWN 242
Y +L++GY + + + Q L EM+ + + T+ +V G G +G +N
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 79 RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD 138
+P+ VT+N+MI C++ L + L H M P TY L+N Y G+ +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 139 WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI-----QDMGIAPNTTIYNTL 193
+ + G EP +S I++A +EG +A + D++ D G + + L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVT 224
+ G+ K E+ A + E M PD T
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 9 ESDFSVL-NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+SD VL L G++ G I EA+ V + + P LS +L LLR W
Sbjct: 147 KSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFW 206
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++K M+ + T++++I CR + +G+ +L F + + T + ++
Sbjct: 207 DVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL-----FKTEKEFRTATLNVDG- 260
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
A+ M+ G P T+ ++ LC+ + +A+ + + +G++ +
Sbjct: 261 --------ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDN 312
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
Y+ L+DG +K R A L EM G++
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGIN 344
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE +L+ GF V I +A ++ M G P++ L L + G+
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIAL 196
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+L +M +KG VT+N ++ G C +L M K +PD T+ LI+ +
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+G A + M+++ +P+ T+++I++ LC G + +A+K FD + G PN
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YNTL+ G+ K R + + L++ M +G + D T+N L+ G+ + G+
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D L+ F + AL VL +M +G PS+ L V G + L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M++ G P+ V +N +I G C+ L + LL+ M K G D TYN L+ C
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ S A L MMK P + TF+ ++ ++GN+ EA++++ + + PN Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
N++++G + A ++ M KG P+ VT+N L+ G K+
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE + V NTL+ G G + AL++L+ M G+ + L L G +
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++ +DM+++ P VTF +I F +Q L + L M + DP+ TYN +IN
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C+ G+ A ++M GC P++ T++T++ C+ V E K+F R+ G +
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
YNTL+ GY + ++ A ++ M + V+PD +T IL+ G
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M G+ L + TIL R + M++ G PS VTF ++ GFC
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ SL+ LM K G +P+ YN LI+ C G+ ++A++ LN M K G + T+
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+T++ LC G +A ++ + I P+ + L+D +VK + +A LY+EM
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
V P+ VT+N ++ G +GR
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGR 296
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
+D NTL+ G G +A +L M + P + T L + ++ G+ +L
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDP-------------- 115
+K+M++ P++VT+N +I G C L + LM GC P
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 116 ---------------------DAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMAT 154
D FTYN LI+ YC GK VA+D M+ P + T
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
++H LC G + A FD +++ YN ++ G KA ++ +A L+ +
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Query: 215 GKGVSPDCVTFNILVGGHYKYGRNGEWN 242
+GV PD T+ I++ G K G E +
Sbjct: 449 VEGVKPDARTYTIMILGLCKNGPRREAD 476
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L GFL+ +A + M PS+ T L + Y +V + M G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+F ++I FCR L S+L M K G +P T+ L++ +C+ + A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ +M+K+G EP++ ++T++ LC+ G + A ++ + ++ G+ + YNTL+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ A + +M + ++PD VTF L+ K G E
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+++ G G +++A M G P++ L + KLF+ M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G T+N +I G+C+ L V + M PD T+ IL++ C+ G+
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ + M ++ + ++ ++H LC+ V +A ++F R+ G+ P+ Y ++
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 196 GYVKAREIGQANMLYEEMRGKGV 218
G K +A+ L M+ +G+
Sbjct: 465 GLCKNGPRREADELIRRMKEEGI 487
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 59/140 (42%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ +D NTL+ G+ VG + ALD+ M V P + IL L G+ S
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
F DM V +N+MI G C+ + L +P G PDA TY I+I
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 128 CIKGKTSVAMDWLNMMMKNG 147
C G A + + M + G
Sbjct: 467 CKNGPRREADELIRRMKEEG 486
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 2/222 (0%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ F G + EA+ L M+ +G+ L T L R G+ LF ++L +G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P ++T+N +I GFC+ L + M + G P+ +TY LI+ C GKT A+
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
LN+M++ EP+ T++ I++ LC++G V +A ++ + ++ P+ YN L+ G
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 198 VKAREIGQAN-MLYEEMRGKG-VSPDCVTFNILVGGHYKYGR 237
++ +A+ +LY ++ PD +++N L+ G K R
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 116/223 (52%), Gaps = 2/223 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+RGF +G + EA ++ M + GVRP++ T L L VG +L M+
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
K P++VT+N++I C+ + ++ LM K PD TYNIL+ C KG
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 136 AMDWLNMMMKNGC--EPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A L +M+K+ +P + +++ ++H LC+E + +A ++D + + A + N L
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
++ +KA ++ +A L++++ + + T+ ++ G K G
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
+F L+ L+ ++ + A VL M G ++ IL + L R + G L
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++M R P ++N +I GFC + L L + M GC T+ ILI+A+C
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK AM +L M G E + +++++ C G + + +FD + + G +P Y
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
NTL+ G+ K ++ +A+ ++E M +GV P+ T+ L+ G G+ E
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
N D NT++RGF + +AL++ + M+ G SL IL + G
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
K+M G V + +I GFC L G++L + + G P A TYN LI
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
+C G+ A + M++ G P++ T++ ++ LC G EA ++ + + +
Sbjct: 290 RGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
PN YN +++ K + A + E M+ + PD +T+NIL+GG
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
++ GF GM+ A +L +MR ++PS+ L L + G W+LF++M R
Sbjct: 499 AMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD 558
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
P V+FN+MI G + + ESLL M + G PD FTY+ LIN + G A
Sbjct: 559 NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEA 618
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
+ + + M+ +G EP +++ +G + ++ ++ D I + + T+MD
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMD 677
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 37/269 (13%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
+ E + N ++ G++ +A++++ M+ RP IL L GD
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 65 SVWKLFKDMLRKGP--RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
KL ML+ P +++N +I G C++ L + L+ + D T NI
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 123 LINA-----------------------------------YCIKGKTSVAMDWLNMMMKNG 147
L+N+ +C G +VA L M +
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 148 CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQAN 207
+PS+ ++ ++ +LC+EG++ +A ++F+ +Q P+ +N ++DG +KA +I A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 208 MLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
L M G+SPD T++ L+ K G
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLG 613
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 97/221 (43%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
M ++ + + D N L+ G + +ALD+ + + IL L+
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
GD +L+K + +S T+ MI GFC+ L V + LL M P F Y
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
N L+++ C +G A M ++ P + +F+ ++ + G++ A + +
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
G++P+ Y+ L++ ++K + +A +++M G PD
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 88/211 (41%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ L G + +A+++ ++ D + + T + + G L
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M +PS +N ++ C++ L L M + PD ++NI+I+
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G A L M + G P + T+S +++ + G + EA FD++ D G P+ I
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
++++ + E + L +++ K + D
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVDKDIVLD 668
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 1/234 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y LN+L+ GF + I EA+ ++ +M ++G +P T L L +
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L + M+ KG +P VT+ +I G C++ + +LL+ M K + D YN +I+
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C A D N M G +P + T++ ++ LC G +A ++ + + I P+
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEM-RGKGVSPDCVTFNILVGGHYKYGRNGE 240
+N L+D +VK ++ +A LY+EM + K PD V +N L+ G KY R E
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 1/230 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E+D + NT++ G + +A D+ ++M G++P + L L G + +
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG-CDPDAFTYNILINAY 127
L DML K P V FN +I F ++ LV E L M K C PD YN LI +
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C + M+ M + G + T++T++H + + A+ VF ++ G+ P+
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YN L+DG + A +++E M+ + + D VT+ ++ K G+
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M+++G+ +L +I R + M++ G PS VT N ++ GFC
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ +L+ M + G PD T+ L++ K S A+ + M+ GC+P + T+
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+++ LC+ G A + ++++ I + IYNT++DG K + + A L+ +M
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 216 KGVSPDCVTFNILVGGHYKYGR 237
KG+ PD T+N L+ YGR
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGR 300
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL++GF + E ++V M G+ + T L + D + +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K M+ G P +T+N+++ G C + + M K D TY +I A C
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK D + G +P++ T++T+M CR+G EA +F +++ G PN+ Y
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
NTL+ ++ + + L +EMR G + D TF ++
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVT 573
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF DM++ P PS V F+ ++ + + SL M G + +TY+I IN +C
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + S+A+ L MMK G PS+ T +++++ C + EA + D++ +MG P+T
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ TL+ G + + +A L E M KG PD VT+ ++ G K G
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRM-RDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
D N L+ F+ G + EA + M + P + A L + + ++
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
F++M ++G ++VT+ +I GF + + + + M G PD TYNIL++ C
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G A+ M K + + T++T++ ALC+ G V + +F + G+ PN
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y T+M G+ + +A+ L+ EM+ G P+ T+N L+ + G
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ G N G + AL V M+ ++ + T + L + G W LF
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ KG +P+ VT+ M+ GFCR+ ++L M + G P++ TYN LI A
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
G + + + + M G +TF + + L
Sbjct: 545 GDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 2/219 (0%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
LMR F + M+ +A++VL M G+ P L L + G K+F+DM K
Sbjct: 172 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK 231
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
P P+ F ++ G+CR+ L+ + +L M + G +PD + L++ Y GK + A
Sbjct: 232 FP-PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADA 290
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCR-EGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
D +N M K G EP++ ++ ++ ALCR E + EA +VF ++ G + Y L+
Sbjct: 291 YDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALIS 350
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
G+ K I + + ++MR KGV P VT+ ++ H K
Sbjct: 351 GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEK 389
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 1/233 (0%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
++ + +L+ G+ G + EA +VL +M++ G+ P + T L G
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCR-QQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+ L DM ++G P+ + V+I CR ++ + + M ++GC+ D TY L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
I+ +C G L+ M K G PS T+ IM A ++ E ++ ++++ G
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
P+ IYN ++ K E+ +A L+ EM G+SP TF I++ G G
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 107/211 (50%), Gaps = 1/211 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD-YGSVW 67
E D V L+ G+ + G + +A D+++ MR G P+++ T+L + L R
Sbjct: 268 EPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAM 327
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++F +M R G VT+ +I GFC+ + G S+L M K G P TY ++ A+
Sbjct: 328 RVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH 387
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
K + ++ + M + GC P + ++ ++ C+ G V EA ++++ ++ G++P
Sbjct: 388 EKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGV 447
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ +++G+ + +A ++EM +G+
Sbjct: 448 DTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
Query: 56 LLLRVGDYGSVWKLFKDMLRKGPR-PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCD 114
+L ++ +G+VW L ++M + P F V++ F + +L MPK+G +
Sbjct: 140 ILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLE 199
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV 174
PD + + L++A C G A M + P++ F+++++ CREG ++EA++V
Sbjct: 200 PDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEV 258
Query: 175 FDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
++++ G+ P+ ++ L+ GY A ++ A L +MR +G P+ + +L+
Sbjct: 259 LVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 41 VGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGP----RPSSVTFNVMICGFCRQQ 96
+ +RP L + R+L R GD G++ F K P VMI RQ
Sbjct: 93 IDLRPGL-----IIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQF 147
Query: 97 GLVVG--ESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMAT 154
G V G E + P+ +P+ F +L+ + A++ L+ M K G EP
Sbjct: 148 GAVWGLIEEMRKTNPEL-IEPELFV--VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYV 204
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
F ++ ALC+ G+V EA KVF+ +++ PN + +L+ G+ + ++ +A + +M+
Sbjct: 205 FGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMK 263
Query: 215 GKGVSPDCVTFNILVGGHYKYGR 237
G+ PD V F L+ G+ G+
Sbjct: 264 EAGLEPDIVVFTNLLSGYAHAGK 286
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
E L+++ +M+ G P L ++ RL ++G+ +L+ +M G P TF +MI
Sbjct: 395 ECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMI 454
Query: 90 CGFCRQQGLVVGESLLHLMPKFG--CDPDAFTYNILINAYCIKGKTSVAMD-WLNMMMK- 145
GF Q L+ + M G P T L+N K +A D W + K
Sbjct: 455 NGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKT 514
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVK 199
+ CE +++ ++ +HAL +G+V EA + +M + P Y LM G K
Sbjct: 515 SSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 35/258 (13%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSL---SAIT-------------------- 51
NTL+ G+ VG + E + H+M RP + SA+
Sbjct: 278 FNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC 337
Query: 52 --------ILFRLLL----RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLV 99
++F L+ R G+ + + ++ ML KG +P V +N ++ GFC+ LV
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 100 VGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIM 159
+++ M + G PD TY LI+ +C G A++ M +NG E FS ++
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 160 HALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
+C+EG VI+A + + GI P+ Y +MD + K + L +EM+ G
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Query: 220 PDCVTFNILVGGHYKYGR 237
P VT+N+L+ G K G+
Sbjct: 518 PSVVTYNVLLNGLCKLGQ 535
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ TL+ G G I + +M G++P + L + GD + + M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+R+G RP +T+ +I GFCR + + M + G + D ++ L+ C +G+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A L M++ G +P T++ +M A C++G+ K+ +Q G P+ YN L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++G K ++ A+ML + M GV PD +T+N L+ GH+++ + +
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 102/197 (51%)
Query: 40 DVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLV 99
D G ++ IL + G+ K+F ++ ++ +P+ V+FN +I G+C+ L
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 100 VGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIM 159
G L H M K PD FTY+ LINA C + K A + M K G P+ F+T++
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 160 HALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
H R G + ++ + ++ G+ P+ +YNTL++G+ K ++ A + + M +G+
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412
Query: 220 PDCVTFNILVGGHYKYG 236
PD +T+ L+ G + G
Sbjct: 413 PDKITYTTLIDGFCRGG 429
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 10/206 (4%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D + NTL+ GF G + A +++ M G+RP T L R GD + +
Sbjct: 377 QPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALE 436
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ K+M + G V F+ ++CG C++ ++ E L M + G PD TY ++++A+C
Sbjct: 437 IRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC 496
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
KG L M +G PS+ T++ +++ LC+ G + A + D + ++G+ P+
Sbjct: 497 KKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDI 556
Query: 189 IYNTLMDG----------YVKAREIG 204
YNTL++G Y++ EIG
Sbjct: 557 TYNTLLEGHHRHANSSKRYIQKPEIG 582
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+++ LM + ++G I +A+ R + L ++++ G++W + ++
Sbjct: 172 LVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEI 231
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L G + FN+++ FC++ + + + + K P ++N LIN YC G
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ M K+ P + T+S +++ALC+E + A +FD + G+ PN I+ TL
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ G+ + EI Y++M KG+ PD V +N LV G K G
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNG 394
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V N LM F G I +A V + ++P++ + L +VG+ ++L M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ RP T++ +I C++ + L M K G P+ + LI+ + G+
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ + M+ G +P + ++T+++ C+ G+++ AR + D + G+ P+ Y TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+DG+ + ++ A + +EM G+ D V F+ LV G K GR
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
+ N E D + L+ G G + +A L M G++P T++ + GD
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDA 501
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+ +KL K+M G PS VT+NV++ G C+ + + LL M G PD TYN L
Sbjct: 502 QTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561
Query: 124 INAY 127
+ +
Sbjct: 562 LEGH 565
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 120/233 (51%), Gaps = 2/233 (0%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
N + D + N ++ G + +A+ + +M++ G +P+ S L + ++G
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 66 VWKLFKDMLR-KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+L MLR + +P+ T N+++ +C Q+ + ++++ M +G PD T+N L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 125 NAYCIKGKTSVAMDW-LNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
AY G T A D + M+ N +P++ T TI++ C EG + EA + F R++++G+
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
PN ++N+L+ G++ ++ + + M GV PD VTF+ L+ G
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 1/233 (0%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
HN+ + + T++ G+ G + EAL +RM+++GV P+L L + L + D
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
V ++ M G +P VTF+ ++ + + E + M + G DPD ++IL
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM-GI 183
Y G+ A LN M K G P++ ++ I+ C G + +A +V+ ++ + G+
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGL 703
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+PN T Y TL+ G+ +A++ +A L ++M GK V P T ++ G G
Sbjct: 704 SPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALD-VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D NTL + + +G A D ++ RM V+P++ + G
Sbjct: 492 KPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEAL 551
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLV-VGESLLHLMPKFGCDPDAFTYNILINA 126
+ F M G P+ FN +I GF + VGE ++ LM +FG PD T++ L+NA
Sbjct: 552 RFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE-VVDLMEEFGVKPDVVTFSTLMNA 610
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
+ G + M++ G +P + FS + R G +A ++ ++++ G+ PN
Sbjct: 611 WSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRG-KGVSPDCVTFNILVGG 231
IY ++ G+ A E+ +A +Y++M G G+SP+ T+ L+ G
Sbjct: 671 VVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWG 716
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 51 TILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK 110
T L L+ G +F ++ +G +PS +T+ ++ RQ+ SL+ + K
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 111 FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIE 170
G PD +N +INA G AM M ++GC+P+ +TF+T++ + G + E
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 171 ARKVFD-RIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ ++ D ++D + PN N L+ + R+I +A + +M+ GV PD VTFN L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 230 GGHYKYG 236
+ + G
Sbjct: 503 KAYARIG 509
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 2/232 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D LM G + G EA + + + + G +PSL T L L R + S+ L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ + G +P ++ FN +I L + M + GC P A T+N LI Y
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 131 GKTSVAMDWLNMMMKNG-CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
GK + L+MM+++ +P+ T + ++ A C + + EA + ++Q G+ P+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 190 YNTLMDGYVKAREIGQA-NMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+NTL Y + A +M+ M V P+ T +V G+ + G+ E
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEE 549
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRM-RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
S NTL++G+ +G + E+ +L M RD ++P+ IL + W +
Sbjct: 425 STFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVY 484
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF---GCDPDAFTYNILINAYC 128
M G +P VTFN + + R E ++ +P+ P+ T ++N YC
Sbjct: 485 KMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVRTCGTIVNGYC 542
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+GK A+ + M + G P++ F++++ ++ +V D +++ G+ P+
Sbjct: 543 EEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVV 602
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++TLM+ + ++ + +Y +M G+ PD F+IL G Y R GE
Sbjct: 603 TFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG---YARAGE 651
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 6/243 (2%)
Query: 3 QNHNEYESDF--SVLNTLMRGFLN-VGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLR 59
QNH+ +V N + G + G EA+DV RM+ +P+ ++ L +
Sbjct: 239 QNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 298
Query: 60 VGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFT 119
WKL+ +M +P+ T+ ++ F R+ E + + + G +PD +
Sbjct: 299 ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 358
Query: 120 YNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ 179
YN L+ +Y G A + ++M GCEP A+++ ++ A R G +A VF+ ++
Sbjct: 359 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Query: 180 DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
+GIAP + L+ Y KAR++ + + +EM GV PD N ++ YGR G
Sbjct: 419 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN---LYGRLG 475
Query: 240 EWN 242
++
Sbjct: 476 QFT 478
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%)
Query: 37 RMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQ 96
MR +P++ T L R G ++F+ + G P +N ++ + R
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Query: 97 GLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFS 156
+ LM GC+PD +YNI+++AY G S A M + G P+M +
Sbjct: 371 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 430
Query: 157 TIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
++ A + +V + + + + G+ P+T + N++++ Y + + + + EM
Sbjct: 431 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 490
Query: 217 GVSPDCVTFNILVGGHYKYG 236
+ D T+NIL+ + K G
Sbjct: 491 PCTADISTYNILINIYGKAG 510
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D V N LM + G + A ++ M+ +G P ++ I+ R G +
Sbjct: 353 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 412
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+F++M R G P+ + +++ + + + + E+++ M + G +PD F N ++N Y
Sbjct: 413 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 472
Query: 129 IKGKTSVAMDWLNMMMKNG-CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
G+ + M+ + M+NG C ++T++ +++ + G + ++F +++ P+
Sbjct: 473 RLGQFT-KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDV 531
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ + + Y + + + ++EEM G +PD T +L+
Sbjct: 532 VTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVG-DYGSVWKLFKDML 74
L+ F G+ +A ++ ++++ G+ P + L R G YG+ ++F M
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA-EIFSLMQ 383
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
G P ++N+M+ + R E++ M + G P ++ +L++AY +
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
+ M +NG EP +++++ R G + K+ +++ + + YN L+
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 503
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+ Y KA + + L+ E++ K PD VT+ +G +
Sbjct: 504 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 541
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 1/216 (0%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
H E D + N ++ + G+ +A V M+ +G+ P++ + +L + D
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+ K+M G P + N M+ + R E +L M C D TYNIL
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 502
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
IN Y G + + + P + T+++ + A R+ ++ +VF+ + D G
Sbjct: 503 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 562
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
AP+ L+ ++ Q + M KGV+
Sbjct: 563 APDGGTAKVLLSACSSEEQVEQVTSVLRTMH-KGVT 597
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 107 LMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREG 166
++ K PD +N+LI+AY K + A ++++ P+ T++ ++ A C G
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 226
Query: 167 NVIEARKVFDRIQDMGIAPNT---TIYNTLMDGYVKAR-EIGQANMLYEEMRGKGVSPDC 222
+ A V +Q+ ++P T T+YN ++G +K + +A +++ M+ P
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 223 VTFNILVGGHYKYGRN 238
T+N+++ + K ++
Sbjct: 287 ETYNLMINLYGKASKS 302
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 6/243 (2%)
Query: 3 QNHNEYESDF--SVLNTLMRGFLN-VGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLR 59
QNH+ +V N + G + G EA+DV RM+ +P+ ++ L +
Sbjct: 217 QNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 276
Query: 60 VGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFT 119
WKL+ +M +P+ T+ ++ F R+ E + + + G +PD +
Sbjct: 277 ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 336
Query: 120 YNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ 179
YN L+ +Y G A + ++M GCEP A+++ ++ A R G +A VF+ ++
Sbjct: 337 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 396
Query: 180 DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
+GIAP + L+ Y KAR++ + + +EM GV PD N ++ YGR G
Sbjct: 397 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN---LYGRLG 453
Query: 240 EWN 242
++
Sbjct: 454 QFT 456
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%)
Query: 37 RMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQ 96
MR +P++ T L R G ++F+ + G P +N ++ + R
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 97 GLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFS 156
+ LM GC+PD +YNI+++AY G S A M + G P+M +
Sbjct: 349 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 408
Query: 157 TIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
++ A + +V + + + + G+ P+T + N++++ Y + + + + EM
Sbjct: 409 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 468
Query: 217 GVSPDCVTFNILVGGHYKYG 236
+ D T+NIL+ + K G
Sbjct: 469 PCTADISTYNILINIYGKAG 488
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D V N LM + G + A ++ M+ +G P ++ I+ R G +
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 390
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+F++M R G P+ + +++ + + + + E+++ M + G +PD F N ++N Y
Sbjct: 391 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 450
Query: 129 IKGKTSVAMDWLNMMMKNG-CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
G+ + M+ + M+NG C ++T++ +++ + G + ++F +++ P+
Sbjct: 451 RLGQFT-KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDV 509
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ + + Y + + + ++EEM G +PD T +L+
Sbjct: 510 VTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 100/220 (45%), Gaps = 2/220 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVG-DYGSVWKLFKDML 74
L+ F G+ +A ++ ++++ G+ P + L R G YG+ ++F M
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA-EIFSLMQ 361
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
G P ++N+M+ + R E++ M + G P ++ +L++AY +
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
+ M +NG EP +++++ R G + K+ +++ + + YN L+
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 481
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+ Y KA + + L+ E++ K PD VT+ +G + +
Sbjct: 482 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 521
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 1/216 (0%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
H E D + N ++ + G+ +A V M+ +G+ P++ + +L + D
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+ K+M G P + N M+ + R E +L M C D TYNIL
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
IN Y G + + + P + T+++ + A R+ ++ +VF+ + D G
Sbjct: 481 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 540
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
AP+ L+ ++ Q + M KGV+
Sbjct: 541 APDGGTAKVLLSACSSEEQVEQVTSVLRTMH-KGVT 575
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 107 LMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREG 166
++ K PD +N+LI+AY K + A ++++ P+ T++ ++ A C G
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204
Query: 167 NVIEARKVFDRIQDMGIAPNT---TIYNTLMDGYVKAR-EIGQANMLYEEMRGKGVSPDC 222
+ A V +Q+ ++P T T+YN ++G +K + +A +++ M+ P
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 223 VTFNILVGGHYKYGRN 238
T+N+++ + K ++
Sbjct: 265 ETYNLMINLYGKASKS 280
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 23/248 (9%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N +++GF VG++ +A + +R+ SL + I + L+R G + + K M
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG PS ++N+++ G C+ L ++++ LM + G PDA TY L++ YC GK
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A L MM+N C P+ T + ++H+L + G + EA ++ ++ + G +T N ++D
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 196 GYVKAREIGQANMLYEEMRGKGVS-----------------------PDCVTFNILVGGH 232
G + E+ +A + + MR G + PD +T++ L+ G
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 233 YKYGRNGE 240
K GR E
Sbjct: 535 CKAGRFAE 542
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 104/200 (52%), Gaps = 4/200 (2%)
Query: 42 GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVG 101
G+ P +L R L + +LF +M KG +P+ TF +++ G+C+ G
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 102 ESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHA 161
LL+ M FG P+ YN +++++C +G+ + + M + G P + TF++ + A
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 162 LCREGNVIEARKVFDRI---QDMGIA-PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
LC+EG V++A ++F + + +G+ PN+ YN ++ G+ K + A L+E +R
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 218 VSPDCVTFNILVGGHYKYGR 237
++NI + G ++G+
Sbjct: 322 DLASLQSYNIWLQGLVRHGK 341
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 4/206 (1%)
Query: 35 LHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCR 94
L R R +PS+ +L ++ V L+KDM+ G P + TFN++I C
Sbjct: 100 LVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD 159
Query: 95 QQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMAT 154
+ L MP+ GC P+ FT+ IL+ YC G T ++ LN M G P+
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
++TI+ + CREG ++ K+ +++++ G+ P+ +N+ + K ++ A+ ++ +M
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 215 GKGV----SPDCVTFNILVGGHYKYG 236
P+ +T+N+++ G K G
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVG 305
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+RG+ G+ + L++L+ M GV P+ + R G K+ + M +G
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGE---SLLHLMPKFGCD-PDAFTYNILINAYCIKGKT 133
P VTFN I C++ ++ S + L G P++ TYN+++ +C G
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A + +N S+ +++ + L R G IEA V ++ D GI P+ YN L
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
MDG K + A + M+ GV PD VT+ L+ G+ G+
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 39/257 (15%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ NT++ F G ++ ++ +MR+ G+ P + L + G ++F DM
Sbjct: 219 IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Query: 74 LRKG----PRPSSVTFNVMICGFCR-----------------------------QQGLV- 99
PRP+S+T+N+M+ GFC+ QGLV
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338
Query: 100 -----VGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMAT 154
E++L M G P ++YNIL++ C G S A + +M +NG P T
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
+ ++H C G V A+ + + PN N L+ K I +A L +M
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 215 GKGVSPDCVTFNILVGG 231
KG D VT NI+V G
Sbjct: 459 EKGYGLDTVTCNIIVDG 475
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 23/237 (9%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ +G I EA ++L +M + G I+ L G+ ++ K M
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
Query: 76 KGPR-----------------------PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG 112
G P +T++ ++ G C+ ++L M
Sbjct: 495 HGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK 554
Query: 113 CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEAR 172
PD+ YNI I+ +C +GK S A L M K GC S+ T+++++ L + + E
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 173 KVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ D +++ GI+PN YNT + + ++ A L +EM K ++P+ +F L+
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 23/239 (9%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N LM G +GM+ +A ++ M+ GV P L VG + L ++M+R
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P++ T N+++ + + E LL M + G D T NI+++ C G+
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Query: 136 AMDWL-----------------------NMMMKNGCEPSMATFSTIMHALCREGNVIEAR 172
A++ + + +++N C P + T+ST+++ LC+ G EA+
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544
Query: 173 KVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+F + + P++ YN + + K +I A + ++M KG T+N L+ G
Sbjct: 545 NLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%)
Query: 45 PSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESL 104
P L + L L + G + LF +M+ + +P SV +N+ I FC+Q + +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 105 LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR 164
L M K GC TYN LI IK + ++ M + G P++ T++T + LC
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 165 EGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYE 211
V +A + D + IAPN + L++ + K + A ++E
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWL-NMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
P + YN+L+ + CIK + + WL M+ G P TF+ ++ ALC V AR+
Sbjct: 110 PSVYLYNLLLES-CIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 174 VFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
+FD + + G PN + L+ GY KA + L M GV P+ V +N +V
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 234 KYGRNGE 240
+ GRN +
Sbjct: 229 REGRNDD 235
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 89/227 (39%), Gaps = 4/227 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+L+ G IFE ++ M++ G+ P++ + L L +M++
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
K P+ +F +I FC+ + + + C Y+++ N G+
Sbjct: 658 KNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLK 716
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + L ++ G E + ++ +LC++ + A + ++ D G + ++D
Sbjct: 717 ATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVID 776
Query: 196 GYVKAREIGQANMLYE---EMRGKGVSPDCVTFNILVGGHYKYGRNG 239
G K +AN + EM G + V N K+ +NG
Sbjct: 777 GLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARDIHQKKHNKNG 823
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 1/233 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+L+ G + G +A ++ M + P + L ++ G + +
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++M+R+ P VT++++I G C L E + M GC PD TY+ILIN YC
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K M M + G + T++ ++ CR G + A ++F R+ G+ PN Y
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE-WN 242
N L+ G +I +A ++ +M+ G+ D VT+NI++ G K G + W+
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y+ + + NT++ G + ALD+L+RM G+ P + L L G +
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++ M ++ P TFN +I ++ + E M + DPD TY++LI
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C+ + A + M+ GC P + T+S +++ C+ V K+F + G+ NT
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y L+ GY +A ++ A ++ M GV P+ +T+N+L+ G G+
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 114/230 (49%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E +L+ GF +++AL + +M +G +P++ + L + +
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M + G P VT+N +I G C ++ M K PD FT+N LI+A
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+G+ S A ++ M++ +P + T+S +++ LC + EA ++F + G P+
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y+ L++GY K++++ L+ EM +GV + VT+ IL+ G+ + G+
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 91/169 (53%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF M++ P PS F+ ++ + + V L M G + T NIL+N +C
Sbjct: 68 LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ S+A+ +L M+K G EPS+ TF ++++ CR V +A +FD++ MG PN
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVV 187
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
IYNT++DG K++++ A L M G+ PD VT+N L+ G GR
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
+M+ +G+ +L IL R M++ G PS VTF ++ GFCR
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ + M G P+ YN +I+ C + A+D LN M K+G P + T+
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
++++ LC G +A ++ + I P+ +N L+D VK + +A YEEM
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 216 KGVSPDCVTFNILVGGHYKYGRNGE 240
+ + PD VT+++L+ G Y R E
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDE 309
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
E D N L+ + G + EA + M + P + ++L L
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
++F M+ KG P VT++++I G+C+ + + G L M + G + TY ILI
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQG 370
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
YC GK +VA + M+ G P++ T++ ++H LC G + +A + +Q G+ +
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD 430
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
YN ++ G KA E+ A +Y + +G+ PD T+ ++ G YK G E
Sbjct: 431 IVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRRE 484
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D + L+ G + EA ++ M G P + +IL + K
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF +M ++G ++VT+ ++I G+CR L V E + M G P+ TYN+L++ C
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK A+ L M KNG + + T++ I+ +C+ G V +A ++ + G+ P+
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
Y T+M G K +A+ L+ +M+ G+ P+
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
++LD+ M PS++ + L + ++ Y V L++ M G + T N+++
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
FCR L + S L M K G +P T+ L+N +C + A+ + M+ G +
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P++ ++TI+ LC+ V A + +R++ GI P+ YN+L+ G + A +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
M + + PD TFN L+ K GR E
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 119/247 (48%), Gaps = 11/247 (4%)
Query: 1 MWQ-----NHNEYESDFSVLNTL---MRGFLNVGMIFEALDVLHRM-RDVGVRPSLSAIT 51
MW+ N NE ES L+T+ MR G +A+D M + GV+ A+
Sbjct: 185 MWELVNEMNKNE-ESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMN 243
Query: 52 ILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF 111
L L++ ++F + +P + TFN++I GFC+ + +++ LM
Sbjct: 244 SLMDALVKENSIEHAHEVFLKLF-DTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVT 302
Query: 112 GCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEA 171
PD TY + AYC +G + L M +NGC P++ T++ +MH+L + V EA
Sbjct: 303 EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEA 362
Query: 172 RKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
V++++++ G P+ Y++L+ K A ++E+M +GV D + +N ++
Sbjct: 363 LGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
Query: 232 HYKYGRN 238
+ R+
Sbjct: 423 ALHHSRD 429
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 3/224 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ GF +A ++ M+ P + T + GD+ V ++
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++M G P+ VT+ +++ + + + + M + GC PDA Y+ LI+
Sbjct: 332 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 391
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD---MGIAPNT 187
G+ A + M G + ++T++ A A ++ R++D +PN
Sbjct: 392 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 451
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
Y L+ +++ +L M VS D T+ +L+ G
Sbjct: 452 ETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRG 495
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 9/200 (4%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
+M + EAL V +M++ G P + L +L + G + ++F+DM +G
Sbjct: 349 VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF---GCDPDAFTYNILINAYCIKGKTS 134
R + +N MI + LL M C P+ TY L+ C K K
Sbjct: 409 VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMK 468
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
+ L+ M+KN ++T+ ++ LC G V EA F+ G+ P + L+
Sbjct: 469 LLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLV 528
Query: 195 DGYVKAREIGQANMLYEEMR 214
D E+ + NM +++
Sbjct: 529 D------ELEKKNMAEAKLK 542
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 117/264 (44%), Gaps = 39/264 (14%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
++L+ G +A ++ M ++P + TIL + L + G KL M
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P + +N +I C + L G SL M + PDA T+ ILI + C G
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ---------------- 179
A + + K+GC PS+ATF+ ++ LC+ G + EAR + +++
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 180 -----------------------DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
D G +P+ YN L++G+ +A +I A L ++ K
Sbjct: 487 RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLK 546
Query: 217 GVSPDCVTFNILVGGHYKYGRNGE 240
G+SPD VT+N L+ G ++ GR E
Sbjct: 547 GLSPDSVTYNTLINGLHRVGREEE 570
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 39/260 (15%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ GF +G + EA ++L G L + L L R Y ++L+ +ML+
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
K +P + + ++I G + + LL MP G PD + YN +I A C +G
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
M + P T + ++ ++CR G V EA ++F I+ G +P+ +N L+D
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 196 GYVKAREIGQANMLYEEMR---------------------------------------GK 216
G K+ E+ +A +L +M
Sbjct: 452 GLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADT 511
Query: 217 GVSPDCVTFNILVGGHYKYG 236
G SPD V++N+L+ G + G
Sbjct: 512 GSSPDIVSYNVLINGFCRAG 531
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 6/242 (2%)
Query: 2 WQNHNEYES-----DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRL 56
WQ E +S D L+ + +GM +A++ RM++ RP + ++ R+
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171
Query: 57 LLRVGDYGSV-WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDP 115
++R + + + ++ +ML+ P+ TF +++ G ++ + + M G P
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 116 DAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF 175
+ TY ILI+ C +G A M +G P + ++ C+ G ++EA ++
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 176 DRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
+ G Y++L+DG +AR QA LY M K + PD + + IL+ G K
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKA 351
Query: 236 GR 237
G+
Sbjct: 352 GK 353
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFE-ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
D N ++R + + F A V + M P+L IL L + G K+
Sbjct: 161 DVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKM 220
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
F DM +G P+ VT+ ++I G C++ L + M G PD+ +N L++ +C
Sbjct: 221 FDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCK 280
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G+ A + L + K+G + +S+++ L R +A +++ + I P+ +
Sbjct: 281 LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIIL 340
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
Y L+ G KA +I A L M KG+SPD +N ++
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 88/227 (38%), Gaps = 41/227 (18%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N +++ G++ E + M + P TIL + R G ++F ++ +
Sbjct: 377 NAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEK 436
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLM--------------------------- 108
G PS TFN +I G C+ L LLH M
Sbjct: 437 SGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESG 496
Query: 109 ------------PKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFS 156
G PD +YN+LIN +C G A+ LN++ G P T++
Sbjct: 497 SILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYN 556
Query: 157 TIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREI 203
T+++ L R G EA K+F D +P +Y +LM + R++
Sbjct: 557 TLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRSLMTWSCRKRKV 601
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 11/200 (5%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ GF G I AL +L+ ++ G+ P L L RVG +KLF
Sbjct: 516 DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Query: 71 --KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESL-LHLMPKFGCDPDAFTYNILINAY 127
KD R P + ++ CR++ ++V +L + + K C D I
Sbjct: 576 YAKDDFRHSP----AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEI---EQ 628
Query: 128 CIK-GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
C K G+T A+ L + E ++ ++ + LC+ G EA VF +++ I
Sbjct: 629 CFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVT 688
Query: 187 TTIYNTLMDGYVKAREIGQA 206
L+ G K ++ A
Sbjct: 689 PPSCVKLIHGLCKREQLDAA 708
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 36/260 (13%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L++ I A VL + +G+ P+L T + + GD S ++ ++ML
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G P + T+ V++ G+C+ +++ M K +P+ TY ++I A C + K+
Sbjct: 255 RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE 314
Query: 136 AMDWLN-----------------------------------MMMKNGCEPSMATFSTIMH 160
A + + M+KN C P A ST++H
Sbjct: 315 ARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIH 374
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
LC+EG V EARK+FD + G P+ YNTL+ G + E+ +A L+++M + P
Sbjct: 375 WLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433
Query: 221 DCVTFNILVGGHYKYGRNGE 240
+ T+N+L+ G K G E
Sbjct: 434 NAFTYNVLIEGLSKNGNVKE 453
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 9/231 (3%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRM-----RDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
LNTL LNV + + D++H M G+ P++ +L + L + D S +K+
Sbjct: 158 LNTL----LNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKV 213
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
++ G P+ VT+ ++ G+ + + + +L M G PDA TY +L++ YC
Sbjct: 214 LDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCK 273
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G+ S A ++ M KN EP+ T+ ++ ALC+E EAR +FD + + P++++
Sbjct: 274 LGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++D + ++ +A L+ +M PD + L+ K GR E
Sbjct: 334 CCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTE 384
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 107/259 (41%), Gaps = 34/259 (13%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
T++ G++ G + A VL M D G P + T+L ++G + + DM +
Sbjct: 230 TTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 289
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P+ VT+ VMI C+++ ++ M + PD+ +I+A C K
Sbjct: 290 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 349
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA----------- 184
A M+KN C P A ST++H LC+EG V EARK+FD + I
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAG 409
Query: 185 -----------------------PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
PN YN L++G K + + + EEM G P+
Sbjct: 410 MCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPN 469
Query: 222 CVTFNILVGGHYKYGRNGE 240
TF IL G K G+ +
Sbjct: 470 KTTFLILFEGLQKLGKEED 488
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 5/229 (2%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK- 76
L+R + G ++ + R+ D GV+ S+ ++ L +L++ + V +FK+
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G P+ T N+++ C++ + +L +P G P+ TY ++ Y +G A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
L M+ G P T++ +M C+ G EA V D ++ I PN Y ++
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 197 YVKAREIGQANMLYEEMRGKGVSPD----CVTFNILVGGHYKYGRNGEW 241
K ++ G+A +++EM + PD C + L H G W
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLW 354
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EA + +M P + ++ L L + G KLF D KG PS +T+N +I
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF-DEFEKGSIPSLLTYNTLI 407
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
G C + L L M + C P+AFTYN+LI G + L M++ GC
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF 467
Query: 150 PSMATFSTIMHALCREGNVIEARKV 174
P+ TF + L + G +A K+
Sbjct: 468 PNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D ++L+TL+ G + EA + + G PSL L + G+ +L+
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
DM + +P++ T+NV+I G + + G +L M + GC P+ T+ IL
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKL 483
Query: 131 GKTSVAMDWLNMMMKNG 147
GK AM ++M + NG
Sbjct: 484 GKEEDAMKIVSMAVMNG 500
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 114/259 (44%), Gaps = 35/259 (13%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
TLM G I EA+ +L M+ G PS +L L + GD V KL +M K
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA---------- 126
G P+ VT+N +I G C + L SLL M C P+ TY LIN
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 127 ------------------YCI-------KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHA 161
Y + +GK AM M + GC+P++ +S ++
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 162 LCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
LCREG EA+++ +R+ G PN Y++LM G+ K +A +++EM G S +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 222 CVTFNILVGGHYKYGRNGE 240
+++L+ G GR E
Sbjct: 467 KFCYSVLIDGLCGVGRVKE 485
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
N +++ + + A++V M + P L L + L +M
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
+G PS V +NV+I G C++ L L+ M GC P+ TYN LI+ C+KGK
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A+ L M+ + C P+ T+ T+++ L ++ +A ++ +++ G N IY+ L+
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLI 369
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
G K + +A L+ +M KG P+ V +++LV G + G+ E
Sbjct: 370 SGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 116/241 (48%), Gaps = 6/241 (2%)
Query: 6 NEYESDFSV--LNTLMRGFLNVGMIFEALD----VLHRMRDVGVRPSLSAITILFRLLLR 59
+E+ SV N+++ +N G+ L+ V++ ++ + P+ + ++ + L +
Sbjct: 140 DEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCK 199
Query: 60 VGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFT 119
+ ++F+ M + P T+ ++ G C+++ + LL M GC P
Sbjct: 200 LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVI 259
Query: 120 YNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ 179
YN+LI+ C KG + ++ M GC P+ T++T++H LC +G + +A + +R+
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 180 DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
PN Y TL++G VK R A L M +G + +++L+ G +K G+
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 240 E 240
E
Sbjct: 380 E 380
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
TL+ G + +A+ +L M + G + ++L L + G L++ M K
Sbjct: 332 TLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK 391
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G +P+ V ++V++ G CR+ + +L+ M GC P+A+TY+ L+ + G A
Sbjct: 392 GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ M K GC + +S ++ LC G V EA V+ ++ +GI P+T Y++++ G
Sbjct: 452 VQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKG 511
Query: 197 YVKAREIGQANMLYEEM---RGKGVSPDCVTFNILVGG 231
+ A LY EM PD VT+NIL+ G
Sbjct: 512 LCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 21/219 (9%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
++LM+GF G+ EA+ V M G + ++L L VG ++ ML
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLM-----PKFGCDPDAFTYNILINAYCIK 130
G +P +V ++ +I G C + L H M PK PD TYNIL++ C++
Sbjct: 496 IGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPK--SQPDVVTYNILLDGLCMQ 553
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
S A+D LN M+ GC+P + T +T ++ L + N + + F
Sbjct: 554 KDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF--------------L 599
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
L+ +K + + A + E M GK ++P T+ ++V
Sbjct: 600 EELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIV 638
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVG-DYGSVWKLFKD 72
+ L+ + G+ EA+ V + M++ G+RP+L + + G ++ V K F +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGL-VVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
M R G +P +TFN ++ C + GL +L M + D F+YN L++A C G
Sbjct: 330 MQRNGVQPDRITFNSLLA-VCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
+ +A + L M P++ ++ST++ + G EA +F ++ +GIA + YN
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
TL+ Y K +A + EM G+ D VT+N L+GG+ K G+ E
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 3/231 (1%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D NTL+ G + A ++L +M + P++ + + + + G +
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF +M G V++N ++ + + +L M G D TYN L+ Y
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+GK M + P++ T+ST++ + G EA ++F + G+ +
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
+Y+ L+D K +G A L +EM +G+SP+ VT+N ++ +GR+
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA---FGRSA 598
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
N + D N+L+ G+ A ++ M + + + + L + + G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+++ M K P+ V+++ +I GF + +L M G D +YN L
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
++ Y G++ A+D L M G + + T++ ++ ++G E +KVF ++ +
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV 510
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
PN Y+TL+DGY K +A ++ E + G+ D V ++ L+ K G
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 99/259 (38%), Gaps = 64/259 (24%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ + VG EALD+L M VG++ + L + G Y V K+F +M R
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 76 KGPRPSSVTFNVMICGFCR----------------------------------QQGLV-V 100
+ P+ +T++ +I G+ + + GLV
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 101 GESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP-SMATFSTIM 159
SL+ M K G P+ TYN +I+A+ + D+ N G P S + S +
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN----GGSLPFSSSALSALT 623
Query: 160 HA-----------LCREGNVIEAR-------------KVFDRIQDMGIAPNTTIYNTLMD 195
L E N + +VF ++ + I PN ++ +++
Sbjct: 624 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 683
Query: 196 GYVKAREIGQANMLYEEMR 214
+ A+ML EE+R
Sbjct: 684 ACSRCNSFEDASMLLEELR 702
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK ++A G ++ FS ++ A R G EA VF+ +++ G+ PN Y
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 191 NTLMDGYVK-AREIGQANMLYEEMRGKGVSPDCVTFNILV-----GGHYKYGRN 238
N ++D K E Q ++EM+ GV PD +TFN L+ GG ++ RN
Sbjct: 307 NAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 360
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 3/224 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ G + EA L M G++P +IL L + + + D R
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P T++VMI G C+ + G+ M P+ YN LI AYC G+ S+
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A++ M G P+ AT+++++ + V EA+ +F+ ++ G+ PN Y L+D
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
GY K ++ + L EM K V P+ +T+ +++GG Y R+G
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG---YARDG 764
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+L TL+ G G +AL++ + + G L L G +++ K++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L +G V++N +I G C ++ L L M K G PD +TY+ILI K
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A+ + + +NG P + T+S ++ C+ E ++ FD + + PNT +YN L
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ Y ++ + A L E+M+ KG+SP+ T+ L+ G
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
ALDV + + G+ PS + IL L+R ++ + F D++ KG P F I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
FC+ + L M + G P+ T+N +I+ + G+ A + M++ G EP
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
++ T+S ++ L R + +A V + G PN +YN L+D +++A + +A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ M KG+S T+N L+ G+ K G+
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ G G + EA + + G + L +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M+++G +P + T++++ICG + + G PD +TY+++I+ C
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+T ++ + MM +P+ ++ ++ A CR G + A ++ + ++ GI+PN+ Y
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+L+ G + +A +L+EEMR +G+ P+ + L+ G+ K G+
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 10/232 (4%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V N L+ F+ G + +A+++ M G+ + S L + + G + +L K+M
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGL-----VVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L G + +F +IC C VGE LL M P LI+ C
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM-----SPGGGLLTTLISGLC 481
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK S A++ + G T + ++H LC G + EA ++ I G +
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
YNTL+ G +++ +A M +EM +G+ PD T++IL+ G + + E
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 104/230 (45%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + T + F G + EA+ + +M + GV P++ + L G Y +
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ M+ +G P+ +T+++++ G R + + +L M K G P+ YN LI+++
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G + A++ ++M+ G + +T++T++ C+ G A ++ + +G N +
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+++ A EM + +SP L+ G K+G++ +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
C ++ G + + ++ G P T NIL+ + + + +++ K G
Sbjct: 199 CTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVS 257
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P + F+T ++A C+ G V EA K+F ++++ G+APN +NT++DG +A M
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
E+M +G+ P +T++ILV G + R G+
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
H + + +L++G + + EA + MR G+ P++ T L ++G
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
V L ++M K P+ +T+ VMI G+ R + LL+ M + G PD+ TY
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 124 INAYCIKG 131
I Y +G
Sbjct: 792 IYGYLKQG 799
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 3/224 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ G + EA L M G++P +IL L + + + D R
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P T++VMI G C+ + G+ M P+ YN LI AYC G+ S+
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A++ M G P+ AT+++++ + V EA+ +F+ ++ G+ PN Y L+D
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
GY K ++ + L EM K V P+ +T+ +++GG Y R+G
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG---YARDG 764
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+L TL+ G G +AL++ + + G L L G +++ K++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L +G V++N +I G C ++ L L M K G PD +TY+ILI K
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A+ + + +NG P + T+S ++ C+ E ++ FD + + PNT +YN L
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ Y ++ + A L E+M+ KG+SP+ T+ L+ G
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
ALDV + + G+ PS + IL L+R ++ + F D++ KG P F I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
FC+ + L M + G P+ T+N +I+ + G+ A + M++ G EP
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
++ T+S ++ L R + +A V + G PN +YN L+D +++A + +A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ M KG+S T+N L+ G+ K G+
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ G G + EA + + G + L +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M+++G +P + T++++ICG + + G PD +TY+++I+ C
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+T ++ + MM +P+ ++ ++ A CR G + A ++ + ++ GI+PN+ Y
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+L+ G + +A +L+EEMR +G+ P+ + L+ G+ K G+
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 10/232 (4%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V N L+ F+ G + +A+++ M G+ + S L + + G + +L K+M
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGL-----VVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L G + +F +IC C VGE LL M P LI+ C
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM-----SPGGGLLTTLISGLC 481
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK S A++ + G T + ++H LC G + EA ++ I G +
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 541
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
YNTL+ G +++ +A M +EM +G+ PD T++IL+ G + + E
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 104/230 (45%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + T + F G + EA+ + +M + GV P++ + L G Y +
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ M+ +G P+ +T+++++ G R + + +L M K G P+ YN LI+++
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G + A++ ++M+ G + +T++T++ C+ G A ++ + +G N +
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+++ A EM + +SP L+ G K+G++ +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
C ++ G + + ++ G P T NIL+ + + + +++ K G
Sbjct: 199 CTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVS 257
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P + F+T ++A C+ G V EA K+F ++++ G+APN +NT++DG +A M
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
E+M +G+ P +T++ILV G + R G+
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
H + + +L++G + + EA + MR G+ P++ T L ++G
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
V L ++M K P+ +T+ VMI G+ R + LL+ M + G PD+ TY
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 124 INAYCIKG 131
I Y +G
Sbjct: 792 IYGYLKQG 799
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+R F +G + A +++M+ GV PS+ IL R ++ + +
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K+M G P+ V++ +I C+ L+ + + M G P YN+LI+ C K
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK A + M+K G E ++ T++T++ L G + EA + I G+ P+ Y
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N+L+ GY A + + LYEEM+ G+ P T+++L+ K G
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
H+ + N L+ G + +A + M + PSL L + G+
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+K+ + M PS +TFN ++ G + + E++L M G PDAFT++IL
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSIL 325
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
+ Y K A+ + +G + + T S +++ALC+EG + +A ++ R G+
Sbjct: 326 FDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL 385
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
PN IYNT++DGY + ++ A M E M +G+ PD + +N L+
Sbjct: 386 VPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 119/302 (39%), Gaps = 70/302 (23%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILF-------------- 54
E NTL++G GM+ +A +VL M+D+G P +ILF
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340
Query: 55 ---------------------RLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
L + G ++ + KG P+ V +N MI G+C
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 94 RQQGLVVGESLLHLMPKFGCDPDAF----------------------------------- 118
R+ LV + M K G PD
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
TYNILI Y K + D L M NG P++ ++ T+++ LC+ ++EA+ V +
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
+D G++P IYN L+DG +I A +EM KG+ + VT+N L+ G G+
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 239 GE 240
E
Sbjct: 581 SE 582
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 3/223 (1%)
Query: 11 DFSVLNTLMRGFLNVG-MIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
DFS L L+ LN MI EA D+ +R+ G+ PS ++T+L L++ + +
Sbjct: 109 DFSYL--LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINV 166
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
F ++L RPS + I + + G L + M P F YN+LI+ C
Sbjct: 167 FLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCK 226
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
+ + A + M+ PS+ T++T++ C+ GN ++ KV +R++ I P+
Sbjct: 227 GKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT 286
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+NTL+ G KA + A + +EM+ G PD TF+IL G+
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 8/225 (3%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
+++N L +G + EA V M D GV P + +L G ++ K+
Sbjct: 499 TLINCLCKG----SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
ML+KG + VT+N +I G L E LL + + G PD FTYN LI+ Y G
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
+ M ++G +P++ T+ ++ +EG + R +M + P+ +YN
Sbjct: 615 VQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTER----LFGEMSLKPDLLVYNG 670
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++ Y ++ +A L ++M K + D T+N L+ G K G+
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 4/232 (1%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E + NTL+ G G + EA D+L + G++P + L G+
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L+++M R G +P+ T++++I C ++G+ + E L M PD YN +++ Y
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYA 676
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ G A + M++ T+++++ + G + E R + D + + P
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD 736
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
YN ++ G+ + ++ A + Y EM+ KG D N LV G + R+ E
Sbjct: 737 TYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKE 788
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
M Q+H ++D + ++ G A ++ M + G+ P++ +
Sbjct: 1 MGQSH--IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHS 58
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
G + +L + M+ K P VTF+ +I F +++ + E + M ++ P TY
Sbjct: 59 GRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
N +I+ +C + + A L+ M GC P + TFST+++ C+ V ++F +
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
GI NT Y TL+ G+ + ++ A L EM GV+PD +TF+ ++ G
Sbjct: 179 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 229
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 102/199 (51%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N ++ F + G +A +L M + + P + + L ++ +++K+MLR
Sbjct: 49 NCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR 108
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P+++T+N MI GFC+Q + + +L M GC PD T++ LIN YC +
Sbjct: 109 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 168
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
M+ M + G + T++T++H C+ G++ A+ + + + G+AP+ ++ ++
Sbjct: 169 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 228
Query: 196 GYVKAREIGQANMLYEEMR 214
G +E+ +A + E+++
Sbjct: 229 GLCSKKELRKAFAILEDLQ 247
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 102/194 (52%)
Query: 43 VRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGE 102
++ + T + L + G++ + LF +M KG P+ +T+N MI FC +
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 103 SLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
LL M + +PD T++ LINA+ + K S A + M++ P+ T+++++
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 163 CREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDC 222
C++ V +A+++ D + G +P+ ++TL++GY KA+ + ++ EM +G+ +
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 223 VTFNILVGGHYKYG 236
VT+ L+ G + G
Sbjct: 186 VTYTTLIHGFCQVG 199
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%)
Query: 92 FCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPS 151
C+ + ++L M + G P+ TYN +I+++C G+ S A L M++ P
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 152 MATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYE 211
+ TFS +++A +E V EA +++ + I P T YN+++DG+ K + A + +
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 212 EMRGKGVSPDCVTFNILVGGHYKYGR 237
M KG SPD VTF+ L+ G+ K R
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKR 165
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 60/123 (48%)
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV 174
D +++ C G A + M + G P++ T++ ++ + C G +A ++
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 175 FDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+ + I P+ ++ L++ +VK R++ +A +Y+EM + P +T+N ++ G K
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 235 YGR 237
R
Sbjct: 128 QDR 130
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+++ GF + +A +L M G P + + L + + ++F +M R
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G ++VT+ +I GFC+ L + LL+ M G PD T++ ++ C K +
Sbjct: 179 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 238
Query: 136 AMDWLNMMMKN 146
A L + K+
Sbjct: 239 AFAILEDLQKS 249
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
LM + G EA V + + G RPSL + T L + YGS+ + ++ + G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+ S+ FN +I F + L M + G +P TYN LI Y I GK +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 138 DWLNMMMKNG---CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
+ L++M++ G P++ TF+ ++ A C++ V EA +V ++++ G+ P+T YNT+
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 195 DGYVKAREI--GQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YV+ E ++ ++ + + + P+ T I+VGG+ + GR
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGR 275
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 111/231 (48%), Gaps = 5/231 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N ++ F G + +A+ L +M+++G+ P+ S L + G +L
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELL 173
Query: 71 KDMLRKGPR---PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
ML +G P+ TFNV++ +C+++ + ++ M + G PD TYN + Y
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY 233
Query: 128 CIKGKTSVAMDWL--NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
KG+T A + M+MK +P+ T ++ CREG V + + R+++M +
Sbjct: 234 VQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N ++N+L++G+V+ + + + M+ V D +T++ ++ G
Sbjct: 294 NLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 21 GFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRP 80
G+ G + + L + RM+++ V +L L + V D + ++ M +
Sbjct: 269 GYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKA 328
Query: 81 SSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL 140
+T++ ++ + + + M K G PDA Y+IL Y + A + L
Sbjct: 329 DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 388
Query: 141 NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKA 200
++ P++ F+T++ C G++ +A +VF+++ G++PN + TLM GY++
Sbjct: 389 ETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEV 447
Query: 201 REIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
++ +A + + MRG GV P+ TF +L G E N
Sbjct: 448 KQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESN 489
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Query: 51 TILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK 110
T L +L+ G +FK + G RPS +++ ++ Q+ S++ + +
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 111 FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIE 170
G D+ +N +INA+ G A+ L M + G P+ +T++T++ G
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 171 ARKVFDRIQDMG---IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
+ ++ D + + G + PN +N L+ + K +++ +A + ++M GV PD VT+N
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 228 LVGGHYKYGRN 238
+ + + G
Sbjct: 229 IATCYVQKGET 239
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALD-VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
E++ V N+L+ GF+ V M + +D VL M++ V+ + + + G
Sbjct: 292 EANLVVFNSLINGFVEV-MDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAA 350
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++FK+M++ G +P + ++++ G+ R + E LL + P+ + +I+ +
Sbjct: 351 QVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGW 409
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G AM N M K G P++ TF T+M +A +V ++ G+ P
Sbjct: 410 CSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPEN 469
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ + L + + A ++N ++ K +
Sbjct: 470 STFLLLAEAWRVAGLTDESNKAINALKCKDI 500
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
LM + G EA V + + G RPSL + T L + YGS+ + ++ + G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+ S+ FN +I F + L M + G +P TYN LI Y I GK +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 138 DWLNMMMKNG---CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
+ L++M++ G P++ TF+ ++ A C++ V EA +V ++++ G+ P+T YNT+
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 195 DGYVKAREI--GQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YV+ E ++ ++ + + + P+ T I+VGG+ + GR
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGR 275
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 5/194 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N ++ F G + +A+ L +M+++G+ P+ S L + G +L
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELL 173
Query: 71 KDMLRKGPR---PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
ML +G P+ TFNV++ +C+++ + ++ M + G PD TYN + Y
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY 233
Query: 128 CIKGKTSVAMDWL--NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
KG+T A + M+MK +P+ T ++ CREG V + + R+++M +
Sbjct: 234 VQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 186 NTTIYNTLMDGYVK 199
N ++N+L++G+V+
Sbjct: 294 NLVVFNSLINGFVE 307
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 13/235 (5%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLR-VGDYGSVW 67
E++ V N+L+ GF+ E +D RD +L+ + + F + VG+
Sbjct: 292 EANLVVFNSLINGFV------EVMD-----RDGIDEVTLTLLLMSFNEEVELVGNQKMKV 340
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++ M + +T++ ++ + + + M K G PDA Y+IL Y
Sbjct: 341 QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+ A + L ++ P++ F+T++ C G++ +A +VF+++ G++PN
Sbjct: 401 VRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 459
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
+ TLM GY++ ++ +A + + MRG GV P+ TF +L G E N
Sbjct: 460 KTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESN 514
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Query: 51 TILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK 110
T L +L+ G +FK + G RPS +++ ++ Q+ S++ + +
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 111 FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIE 170
G D+ +N +INA+ G A+ L M + G P+ +T++T++ G
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 171 ARKVFDRIQDMG---IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
+ ++ D + + G + PN +N L+ + K +++ +A + ++M GV PD VT+N
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 228 LVGGHYKYGRN 238
+ + + G
Sbjct: 229 IATCYVQKGET 239
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 81/187 (43%), Gaps = 1/187 (0%)
Query: 32 LDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICG 91
+ VL M++ V+ + + + G ++FK+M++ G +P + ++++ G
Sbjct: 340 VQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 399
Query: 92 FCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPS 151
+ R + E LL + P+ + +I+ +C G AM N M K G P+
Sbjct: 400 YVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 458
Query: 152 MATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYE 211
+ TF T+M +A +V ++ G+ P + + L + + A ++N
Sbjct: 459 IKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAIN 518
Query: 212 EMRGKGV 218
++ K +
Sbjct: 519 ALKCKDI 525
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 112/221 (50%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+++ GF G + A+ M G+ P++ T L L + ++ +M
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG + + +I GFC++ + +L + + G +P YN LI+ + G
Sbjct: 648 KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVA 707
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+D M+K+G + T++T++ L ++GN+I A +++ +Q +G+ P+ IY +++
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN 767
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
G K + + ++EEM+ V+P+ + +N ++ GHY+ G
Sbjct: 768 GLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+LM G + +AL++ M++ GV+ + A L + + S LF ++L +
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G PS +N +I GF +V L M K G D TY LI+ G +A
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ M G P ++ I++ L ++G ++ K+F+ ++ + PN IYN ++ G
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+ + + +A L++EM KG+ PD TF+ILV G
Sbjct: 804 HYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQ 839
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 115/224 (51%), Gaps = 2/224 (0%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
++T+++G+L EAL + + G+ TIL L + G +L M
Sbjct: 412 VHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTIL-SWLCKQGKTDEATELLSKME 470
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
+G P+ V++N ++ G CRQ+ + + + + + G P+ +TY+ILI+
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQ 530
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF-DRIQDMGIAPNTTIYNTL 193
A++ +N M + E + + TI++ LC+ G +AR++ + I++ + + YN++
Sbjct: 531 NALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSI 590
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+DG+ K E+ A YEEM G G+SP+ +T+ L+ G K R
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G + +A+ + M G+ ++ A T L + D S LF M ++GP P+SVTF
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF 377
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
+V+I F + + M G P F + +I + K A+ + +
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
G ++ +TI+ LC++G EA ++ +++ GI PN YN +M G+ + + +
Sbjct: 438 TGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
A +++ + KG+ P+ T++IL+ G ++
Sbjct: 497 ARIVFSNILEKGLKPNNYTYSILIDGCFR 525
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 112/231 (48%), Gaps = 1/231 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E + N L+ + A+D++++M ++ V P + L++
Sbjct: 159 FEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAK 218
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+L+ M+ G +VT +++ R++ +L + G +PD+ Y++ + A
Sbjct: 219 ELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQAC 278
Query: 128 CIKGKTSVAMDWL-NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
C ++A L M K C PS T+++++ A ++GN+ +A ++ D + GI+ N
Sbjct: 279 CKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMN 338
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+L+ G+ K ++ A +L+++M +G SP+ VTF++L+ K G
Sbjct: 339 VVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 107/230 (46%), Gaps = 1/230 (0%)
Query: 12 FSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
F +N + + + EA ++ RM +GV +L R LR ++
Sbjct: 198 FPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLS 257
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLM-PKFGCDPDAFTYNILINAYCIK 130
+ +G P S+ +++ + C+ L + SLL M K C P TY +I A +
Sbjct: 258 RAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G A+ + M+ +G ++ ++++ C+ +++ A +FD+++ G +PN+ +
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF 377
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ L++ + K E+ +A Y++M G++P + ++ G K ++ E
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 36/259 (13%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V NT++ G EA ++L +M G+ P++ + + R + +F ++
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L KG +P++ T++++I G R +++ M + + Y +IN C G+T
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 134 SVAMDWLNMMMK------------------------------------NGCEPSMATFST 157
S A + L M++ NG P++ T+++
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 158 IMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
+M+ LC+ + +A ++ D +++ G+ + Y L+DG+ K + A+ L+ E+ +G
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 218 VSPDCVTFNILVGGHYKYG 236
++P +N L+ G G
Sbjct: 685 LNPSQPIYNSLISGFRNLG 703
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D L+ GF + A + + + G+ PS L +G+ + L+
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K ML+ G R T+ +I G + L++ L M G PD Y +++N K
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ + M KN P++ ++ ++ REGN+ EA ++ D + D GI P+ +
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Query: 191 NTLMDGYV 198
+ L+ G V
Sbjct: 833 DILVSGQV 840
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 63/131 (48%)
Query: 99 VVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
V+ L+ FG + ++ +N L+NAY +T A+D +N M++ P +
Sbjct: 145 VLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRT 204
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ AL + ++ EA++++ R+ +G+ + LM ++ + +A + +G
Sbjct: 205 LSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGA 264
Query: 219 SPDCVTFNILV 229
PD + +++ V
Sbjct: 265 EPDSLLYSLAV 275
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 110/217 (50%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
LNTL+ ++ G + +A +D+ +RP+ + IL + L D+ + K+F +ML
Sbjct: 154 LNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEML 213
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
+PS VT+N +I CR + +SLL M K P+A T+ +L+ C KG+ +
Sbjct: 214 EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYN 273
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A + M GC+P + + +M L + G + EA+ + ++ I P+ IYN L+
Sbjct: 274 EAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILV 333
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ + +A + EM+ KG P+ T+ +++ G
Sbjct: 334 NHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDG 370
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
N L++GFL+ A V M ++ V+PS+ L L R D G L +DM+
Sbjct: 189 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMI 248
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
+K RP++VTF +++ G C + + L+ M GC P Y IL++ +G+
Sbjct: 249 KKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRID 308
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A L M K +P + ++ +++ LC E V EA +V +Q G PN Y ++
Sbjct: 309 EAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
DG+ + + + M P TF +V G K G
Sbjct: 369 DGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGG 410
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
S+ L++ + G + +A+DV H++ ++ ++ L +L+ G+ F
Sbjct: 117 SLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG 176
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
RP+SV+FN++I GF + + M + P TYN LI C
Sbjct: 177 AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDD 236
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
A L M+K P+ TF +M LC +G EA+K+ ++ G P Y
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
LM K I +A +L EM+ + + PD V +NILV
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILV 333
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 93/202 (46%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EAL + H+ +++G R + + L L + ++ +V ++ + + + R F +I
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
+ + + + H + F C + N LIN G+ A + +
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P+ +F+ ++ + + A KVFD + +M + P+ YN+L+ + ++G+A L
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 210 YEEMRGKGVSPDCVTFNILVGG 231
E+M K + P+ VTF +L+ G
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKG 265
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 13/219 (5%)
Query: 29 FEALDVLHRM---RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSV-- 83
F+A+D + R+ R+V R SL L+ G GSV K D+ K V
Sbjct: 97 FDAVDQILRLVRYRNVRCRESL-----FMGLIQHYGKAGSVDKAI-DVFHKITSFDCVRT 150
Query: 84 --TFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLN 141
+ N +I L +S P++ ++NILI + K A +
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFD 210
Query: 142 MMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAR 201
M++ +PS+ T+++++ LCR ++ +A+ + + + I PN + LM G
Sbjct: 211 EMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKG 270
Query: 202 EIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
E +A L +M +G P V + IL+ K GR E
Sbjct: 271 EYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
LM+G G EA ++ M G +P L IL L + G L +M ++
Sbjct: 262 LMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRR 321
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+P V +N+++ C + + +L M GC P+A TY ++I+ +C +
Sbjct: 322 IKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGL 381
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEA 171
+ LN M+ + P+ ATF ++ L + GN+ A
Sbjct: 382 NVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 415
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V L+ GF +G +VLH M PS+ + + L + +FK++
Sbjct: 250 VYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNL 309
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
KG P V + MI GFC + L L M K G P+ F YN++I+ + +G+
Sbjct: 310 KDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEI 369
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
S+ + N M++NG +M + +T++ C G EA ++F + + G+ PN YN L
Sbjct: 370 SLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNAL 429
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ G+ K ++ + LY+E++ G+ P + + LV
Sbjct: 430 IKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 2/230 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
++ + ++L ++ G++ EA++V + ++D+G+ S+ + L+ W
Sbjct: 141 FKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFW 200
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+L K+M+ S +I C + G LL K G DP + Y LI+ +
Sbjct: 201 ELHKEMVE--SEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGF 258
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G + + L+ M+ PSM + I+ LC +EA +F ++D G AP+
Sbjct: 259 CEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDR 318
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+Y T++ G+ + +G A L+ EM KG+ P+ +N+++ GH+K G
Sbjct: 319 VVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGE 368
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y D V T++RGF G + A + M G+RP+ A ++ + G+ V
Sbjct: 314 YAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVE 373
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ +MLR G + ++ N MI GFC + M + G P+A TYN LI +
Sbjct: 374 AFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGF 433
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
C + K + + G +PS ++ ++ L
Sbjct: 434 CKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 20/230 (8%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
++ D NTL+ G I EAL + M + G +++
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA------------------- 212
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
LF M+ G P +TFN +I G C + ++ +L++ M G D TY ++N
Sbjct: 213 -LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G T A++ L+ M + +P + +S I+ LC++G+ +A+ +F + + GIAPN
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YN ++DG+ A L +M + ++PD +TFN L+ K G+
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NT++ + + E + +L + G+ + + L V + + LF
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++M+ G P ++T N+++ GFC + L L ++ D D YNI+I+ C
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K A D + +G EP + T++ ++ C + + +A +F +++D G P+ + Y
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
NTL+ G +KA EI ++ L EMR G S D T +
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 4/227 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+++ GF D M D+ P + + + R +L
Sbjct: 400 DTVTYNSMIYGFCK----HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+++ R+G ++ T+N +I GFC L + L M G PD T NIL+ +C
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K A++ ++ + + ++ I+H +C+ V EA +F + G+ P+ Y
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
N ++ G+ I AN+L+ +M+ G PD T+N L+ G K G
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 4/227 (1%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
NTL+ G G + EA ++++M G+ + + + ++GD S L M
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+P V ++ +I C+ + L M + G P+ FTYN +I+ +C G+
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
S A L M++ P + TF+ ++ A +EG + EA K+ D + I P+T YN++
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ G+ K A +++ M SPD VTFN ++ + + R E
Sbjct: 408 IYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDE 450
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 37 RMRDVGVR--PSLSAITIL-FRLLLRVGDY-----GSVWKLFKDMLRKGPRPSSVTFNVM 88
R+ + G + PSL+ +T L L+ G + F M+R P ++V N +
Sbjct: 53 RVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKV 112
Query: 89 ICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC 148
I F R V SL M + +++NILI +C K S ++ + K G
Sbjct: 113 IGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF 172
Query: 149 EPSMATFSTIMHALCREGNV---------------IEARKVFDRIQDMGIAPNTTIYNTL 193
+P + TF+T++H LC E + +EA +FD++ ++G+ P +NTL
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
++G + +A L +M GKG+ D VT+ +V G K G
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 56/261 (21%)
Query: 30 EALDVLHRMRDVGVRPSLSAITI--LFRLLLRVGDYGSVWKLFKDM-LRKGPRPSSVTFN 86
+A+D M V RP +A+ + + +R+ L++ M +R+ P + +FN
Sbjct: 89 DAIDFFDYM--VRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL-NIYSFN 145
Query: 87 VMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN 146
++I FC L S + K G PD T+N L++ C++ + S A+ M++
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 147 G---------------CEPSMATFSTIMHALCREGNVIEAR------------------- 172
G P + TF+T+++ LC EG V+EA
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 173 ----------------KVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
+ ++++ I P+ IY+ ++D K A L+ EM K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 217 GVSPDCVTFNILVGGHYKYGR 237
G++P+ T+N ++ G +GR
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGR 346
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 63/154 (40%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ GF + EAL++ ++ + A I+ + + W LF
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ G P T+NVMI GFC + + L H M G +PD TYN LI
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR 164
G+ +++ ++ M NG T +CR
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 20/230 (8%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
++ D NTL+ G I EAL + M + G +++
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA------------------- 212
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
LF M+ G P +TFN +I G C + ++ +L++ M G D TY ++N
Sbjct: 213 -LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G T A++ L+ M + +P + +S I+ LC++G+ +A+ +F + + GIAPN
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YN ++DG+ A L +M + ++PD +TFN L+ K G+
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NT++ + + E + +L + G+ + + L V + + LF
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++M+ G P ++T N+++ GFC + L L ++ D D YNI+I+ C
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K A D + +G EP + T++ ++ C + + +A +F +++D G P+ + Y
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
NTL+ G +KA EI ++ L EMR G S D T ++
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVA 649
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 4/227 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+++ GF D M D+ P + + + R +L
Sbjct: 400 DTVTYNSMIYGFCK----HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+++ R+G ++ T+N +I GFC L + L M G PD T NIL+ +C
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K A++ ++ + + ++ I+H +C+ V EA +F + G+ P+ Y
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
N ++ G+ I AN+L+ +M+ G PD T+N L+ G K G
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 4/227 (1%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
NTL+ G G + EA ++++M G+ + + + ++GD S L M
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+P V ++ +I C+ + L M + G P+ FTYN +I+ +C G+
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
S A L M++ P + TF+ ++ A +EG + EA K+ D + I P+T YN++
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ G+ K A +++ M SPD VTFN ++ + + R E
Sbjct: 408 IYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDE 450
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 37 RMRDVGVR--PSLSAITIL-FRLLLRVGDY-----GSVWKLFKDMLRKGPRPSSVTFNVM 88
R+ + G + PSL+ +T L L+ G + F M+R P ++V N +
Sbjct: 53 RVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKV 112
Query: 89 ICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC 148
I F R V SL M + +++NILI +C K S ++ + K G
Sbjct: 113 IGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGF 172
Query: 149 EPSMATFSTIMHALCREGNV---------------IEARKVFDRIQDMGIAPNTTIYNTL 193
+P + TF+T++H LC E + +EA +FD++ ++G+ P +NTL
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
++G + +A L +M GKG+ D VT+ +V G K G
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 56/261 (21%)
Query: 30 EALDVLHRMRDVGVRPSLSAITI--LFRLLLRVGDYGSVWKLFKDM-LRKGPRPSSVTFN 86
+A+D M V RP +A+ + + +R+ L++ M +R+ P + +FN
Sbjct: 89 DAIDFFDYM--VRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL-NIYSFN 145
Query: 87 VMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL------ 140
++I FC L S + K G PD T+N L++ C++ + S A+
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 141 ---------NMMMKNGCEPSMATFSTIMHALCREGNVIEAR------------------- 172
+ M++ G P + TF+T+++ LC EG V+EA
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 173 ----------------KVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
+ ++++ I P+ IY+ ++D K A L+ EM K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 217 GVSPDCVTFNILVGGHYKYGR 237
G++P+ T+N ++ G +GR
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGR 346
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 129/273 (47%), Gaps = 36/273 (13%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRM-RDVGVRPSLSAITILFRLLLRVGD 62
N + +E++ + NT++ G VG +A ++L + ++ S ++ + ++VGD
Sbjct: 546 NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGD 605
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLM-------------- 108
S + +++M G P+ VTF +I GFC+ + + + H M
Sbjct: 606 TDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGA 665
Query: 109 ---------------------PKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG 147
P+ G P+ YN LI+ + GK A+D M+ +G
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Query: 148 CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQAN 207
+ T++T++ L ++GN+ A ++ + D+GI P+ ++ L++G K + +A+
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKAS 785
Query: 208 MLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ EEM+ K V+P+ + ++ ++ GH++ G E
Sbjct: 786 KMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNE 818
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Query: 53 LFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG 112
+F L + G + K M +KG P+ V +N M+ CR + + + S+ M + G
Sbjct: 455 IFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG 514
Query: 113 CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEAR 172
+P+ FTY+ILI+ + A D +N M + E + ++TI++ LC+ G +A+
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 173 KVFDR-IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
++ I++ + + T YN+++DG+VK + A Y EM G SP+ VTF L+ G
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Query: 232 HYKYGR 237
K R
Sbjct: 635 FCKSNR 640
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+L+ GF + AL++ H M+ + ++ L A L + D + + LF ++
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G P+ +N +I GF + L M G D FTY +I+ G ++A
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
D + ++ G P +++ L ++G ++A K+ + ++ + PN +Y+T++ G
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ + + +A L++EM KG+ D FN+LV G
Sbjct: 810 HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 36/259 (13%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+++ F+ G + EA+ V+ M G+ S+ A T L + + G LF M +
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374
Query: 77 GPRPSSVTFNVMICGFC-------------RQQGLVVGES--LLHLMPKFGC----DPDA 117
G P V F+VM+ FC R + + + S L+H M + GC P+A
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ-GCLKAESPEA 433
Query: 118 ----------------FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHA 161
F N + +C +GK A +L MM + G EP++ ++ +M A
Sbjct: 434 ALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLA 493
Query: 162 LCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
CR N+ AR +F + + G+ PN Y+ L+DG+ K ++ A + +M +
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEAN 553
Query: 222 CVTFNILVGGHYKYGRNGE 240
V +N ++ G K G+ +
Sbjct: 554 EVIYNTIINGLCKVGQTSK 572
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 1/223 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E N L+ ++ + A+D M D V P + + + L+R
Sbjct: 165 FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 224
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+++ M+ G +VT +++ R++ + + G +PD +++ + A
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAA 284
Query: 128 CIKGKTSVAMDWLNMMM-KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
C +A+D L M K G S T+++++ A +EGN+ EA +V D + GI +
Sbjct: 285 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMS 344
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+L++GY K E+G+A L+ M +G++PD V F+++V
Sbjct: 345 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
+N ++ + +I EA ++ ++M +GV +L R LR K+F+ ++
Sbjct: 207 VNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVM 266
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMP-KFGCDPDAFTYNILINAYCIKGKT 133
+G P + F++ + C+ LV+ LL M K G TY +I A+ +G
Sbjct: 267 SRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNM 326
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A+ ++ M+ G S+ +++++ C+ + +A +F+R+++ G+AP+ +++ +
Sbjct: 327 EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVM 386
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
++ + K E+ +A Y M+ ++P V + ++ G K
Sbjct: 387 VEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLK 427
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A + M + G+ P+ +IL + D + W + M + V +N +I
Sbjct: 503 ARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIIN 562
Query: 91 GFCRQ-QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
G C+ Q E L +L+ + +YN +I+ + G T A++ M +NG
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS 622
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P++ TF+++++ C+ + A ++ ++ M + + Y L+DG+ K ++ A L
Sbjct: 623 PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ E+ G+ P+ +N L+ G G+
Sbjct: 683 FSELPELGLMPNVSVYNSLISGFRNLGK 710
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 2/211 (0%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
E + D L+ GF + A + + ++G+ P++S L +G +
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
L+K M+ G T+ MI G + + + L + G PD + +L+N
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
KG+ A L M K P++ +ST++ REGN+ EA ++ D + + GI +
Sbjct: 775 LSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHD 834
Query: 187 TTIYNTLMDGYVKAREIGQ--ANMLYEEMRG 215
T++N L+ G V+ +++ EMR
Sbjct: 835 DTVFNLLVSGRVEKPPAASKISSLASPEMRS 865
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 35/239 (14%)
Query: 31 ALDVLHRMR-DVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
ALD+L MR +GV S T + ++ G+ ++ +M+ G S + ++
Sbjct: 293 ALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLV 352
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMM------ 143
G+C+ L L + M + G PD +++++ +C + A+++ M
Sbjct: 353 NGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIA 412
Query: 144 --------MKNGC------EPSMATF-----STIMHA---------LCREGNVIEARKVF 175
M GC E ++ F S I H C++G V A
Sbjct: 413 PSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFL 472
Query: 176 DRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
++ GI PN YN +M + + + + A ++ EM KG+ P+ T++IL+ G +K
Sbjct: 473 KMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFK 531
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 111 FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIE 170
F P AF Y L+NAY + A+D +M+ P + + ++ +L R + E
Sbjct: 165 FELTPRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDE 222
Query: 171 ARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
A+++++++ +G+A + LM ++ R+ +A ++ + +G PD + F++ V
Sbjct: 223 AKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQ 282
Query: 231 GHYK 234
K
Sbjct: 283 AACK 286
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G + +A ++ R GV P+ + +L + D ++LF ML + P ++
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
++I GFCR+ + LL M G PD +Y L+N+ C K + A L M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
GC P + ++T++ CRE ++ARKV D + G +PN+ Y TL+ G +
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
EEM KG SP N LV G +G+ E
Sbjct: 349 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAIT-ILFRLLLRVGDYGSVWKLFKD 72
+ L++ + + + L ++M + P + IL L+ G ++LFK
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
G P++ ++N+++ FC L + L M + PD +Y ILI +C KG+
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
+ AM+ L+ M+ G P +++T++++LCR+ + EA K+ R++ G P+ YNT
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
++ G+ + A + ++M G SP+ V++ L+GG
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N LM+ F + A + +M + V P + + IL + R G +L DML
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P +++ ++ CR+ L LL M GC+PD YN +I +C + +
Sbjct: 254 KGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMD 313
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A L+ M+ NGC P+ ++ T++ LC +G E +K + + G +P+ ++ N L+
Sbjct: 314 ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVK 373
Query: 196 GYVKAREIGQA 206
G+ ++ +A
Sbjct: 374 GFCSFGKVEEA 384
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D L++GF G + A+++L M + G P + T L L R +KL
Sbjct: 224 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M KG P V +N MI GFCR+ + +L M GC P++ +Y LI C +
Sbjct: 284 CRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQ 343
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G +L M+ G P + + ++ C G V EA V + + G ++ +
Sbjct: 344 GMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTW 403
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
++ E + + E+ + ++ D ++ +G
Sbjct: 404 EMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIG 443
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 79/199 (39%), Gaps = 13/199 (6%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
TL+ + EA +L RM+ G P L + R K+ DML
Sbjct: 264 TTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLS 323
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P+SV++ +I G C Q G+ L M G P N L+ +C GK
Sbjct: 324 NGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF------------DRIQDMGI 183
A D + ++MKNG T+ ++ +C E E K+F RI D+GI
Sbjct: 384 ACDVVEVVMKNGETLHSDTWEMVIPLICNEDES-EKIKLFLEDAVKEEITGDTRIVDVGI 442
Query: 184 APNTTIYNTLMDGYVKARE 202
+ + + L ARE
Sbjct: 443 GLGSYLSSKLQMKRKNARE 461
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 113/235 (48%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
++ E D ++N ++ GF G +AL +L + G+ + + + L G
Sbjct: 261 ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRT 320
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
LF+++ + G +P + +N ++ G+ + L ES++ M K G PD TY++L
Sbjct: 321 LEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLL 380
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
I+AY G+ A L M +P+ FS ++ G + +V ++ +G+
Sbjct: 381 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 440
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
P+ YN ++D + K + A ++ M +G+ PD VT+N L+ H K+GR+
Sbjct: 441 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 495
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 3/227 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L++G++ G + +A ++ M GV P ++L + G + S + K+M
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+P+S F+ ++ GF + +L M G PD YN++I+ +
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
AM + M+ G EP T++T++ C+ G I A ++F+ ++ G P T YN +++
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
Y L +M+ +G+ P+ VT LV YG++G +N
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD---VYGKSGRFN 566
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 35/253 (13%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V + L+ GF + G + VL M+ +GV+P ++ + F M
Sbjct: 411 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L +G P VT+N +I C+ +V E + M + GC P A TYNI+IN+Y + +
Sbjct: 471 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERW 530
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
L M G P++ T +T++ + G +A + + ++ +G+ P++T+YN L
Sbjct: 531 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 590
Query: 194 MDGYVKA-----------------------------------REIGQANMLYEEMRGKGV 218
++ Y + R +A + + M+ GV
Sbjct: 591 INAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 650
Query: 219 SPDCVTFNILVGG 231
PD VT+ L+
Sbjct: 651 KPDVVTYTTLMKA 663
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 104/226 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ ++N G A VL M V+P+ + L G++ +++
Sbjct: 373 DEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVL 432
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K+M G +P +NV+I F + L + M G +PD T+N LI+ +C
Sbjct: 433 KEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKH 492
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ VA + M + GC P T++ ++++ + + +++ +++ GI PN +
Sbjct: 493 GRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH 552
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
TL+D Y K+ A EEM+ G+ P +N L+ + + G
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG 598
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
+L +M+ G+ P++ T L + + G + + ++M G +PSS +N +I +
Sbjct: 536 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYA 595
Query: 94 RQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMA 153
++ + +M G P N LINA+ + + A L M +NG +P +
Sbjct: 596 QRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVV 655
Query: 154 TFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
T++T+M AL R + V++ + G P+
Sbjct: 656 TYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 60/147 (40%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
TL+ + G +A++ L M+ VG++PS + L + G F+ M
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS 612
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G +PS + N +I F + ++L M + G PD TY L+ A K
Sbjct: 613 DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHAL 162
M+ +GC+P S + AL
Sbjct: 673 VPVVYEEMIMSGCKPDRKARSMLRSAL 699
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D ++ N LM G G A + M D + P L +R GD+ K+F
Sbjct: 449 DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF 508
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ KG + V N MI GFCR L + ++ M + PD FTY+ +I+ Y +
Sbjct: 509 SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQ 568
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ A+ M KN C+P++ T++++++ C +G+ A + F +Q + PN Y
Sbjct: 569 QDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTY 628
Query: 191 NTLMDGYVK-AREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
TL+ K + + +A +E M P+ VTFN L+ G K
Sbjct: 629 TTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%)
Query: 44 RPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGES 103
+P ++ IL L + G + +KG P+++++ +I +C+ + +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 104 LLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALC 163
LL M + GC PD TY ILI+ + G A++ ++ G P A ++ +M LC
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 164 REGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCV 223
+ G + A+ +F + D I P+ +Y TL+DG++++ + +A ++ KGV D V
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 224 TFNILVGGHYKYG 236
N ++ G + G
Sbjct: 522 HHNAMIKGFCRSG 534
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L++G N G + ++ G P++ + ++GD + + +FK++ KG
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P+ TF MI GFC++ V + LL + + G + N +I+A G
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ + ++ N C+P +AT++ +++ LC+EG A D G+ PN Y L+ Y
Sbjct: 331 ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
K++E A+ L +M +G PD VT+ IL+ G
Sbjct: 391 CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG 424
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 15/241 (6%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N +++GF GM+ EAL ++RM + + P + + ++ D + K+F+ M +
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT-S 134
+P+ VT+ +I GFC Q + E M P+ TY LI + + T
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCRE--GNVIEA------------RKVFDRIQD 180
A+ + +MM N C P+ TF+ ++ ++ G V+ + F R++
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKS 703
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
G + + YN+ + + A M ++M KG SPD V+F ++ G G + +
Sbjct: 704 DGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Query: 241 W 241
W
Sbjct: 764 W 764
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D L+ G + G + +A+++ ++ D GV P + +L L + G +
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF +ML + P + + +I GF R + L + G D +N +I +C
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G A+ +N M + P T+STI+ ++ ++ A K+F ++ PN
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
Y +L++G+ + A ++EM+ + + P+ VT+ L+
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A +L +M + G +P + IL L+ G + ++ +G P + +N+++
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G C+ + + L M PDA+ Y LI+ + G A ++ ++ G +
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
+ + ++ CR G + EA +R+ + + P+ Y+T++DGYVK +++ A ++
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 211 EEMRGKGVSPDCVTFNILVGG 231
M P+ VT+ L+ G
Sbjct: 579 RYMEKNKCKPNVVTYTSLING 599
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 103/227 (45%), Gaps = 3/227 (1%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
L+ ++ + G + +A+++ + ++ P + A L LL++ G K++
Sbjct: 135 EALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYD 194
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
+M +G + + +++ G C + + VG L+ GC P+ YN +I YC G
Sbjct: 195 EMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLG 254
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
A + G P++ TF T+++ C+EG+ + + ++ +++ G+ + N
Sbjct: 255 DIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLN 314
Query: 192 TLMDG-YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++D Y ++ A + + PD T+NIL+ K G+
Sbjct: 315 NIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCKEGK 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 97/241 (40%), Gaps = 23/241 (9%)
Query: 2 WQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVG 61
+ N+ + + +L+ GF G A + M+ + P++ T L R L +
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 62 DYGS----VWKLFKDMLRKGPRPSSVTFNVMICGFCRQ-QGLVVGE-------------S 103
W+L M+ P+ VTFN ++ GF ++ G V+ E
Sbjct: 640 STLEKAVYYWEL---MMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSE 696
Query: 104 LLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALC 163
H M G A YN + C+ G A + + M+K G P +F+ I+H C
Sbjct: 697 FFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756
Query: 164 REGNVIEARKV-FDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDC 222
GN + R + F + + G+ Y+ +++ ++ I +A+ + M K + +
Sbjct: 757 VVGNSKQWRNMDFCNLGEKGLEVAVR-YSQVLEQHLPQPVICEASTILHAMVEKADTKEP 815
Query: 223 V 223
V
Sbjct: 816 V 816
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 2/204 (0%)
Query: 39 RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGL 98
R G + T + L R +G + KL +M+R G +P++VT+N +I + R L
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 99 VVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
++ + M + GC+PD TY LI+ + G +AMD M + G P T+S I
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
++ L + G++ A ++F + G PN +N ++ + KAR A LY +M+ G
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 219 SPDCVTFNIL--VGGHYKYGRNGE 240
PD VT++I+ V GH + E
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAE 554
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 55 RLLLRVGDYGSVWKLFKDMLRK-GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGC 113
++L ++ +Y + F + R+ G + T+ M+ R + LL M + GC
Sbjct: 331 QVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGC 390
Query: 114 DPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
P+ TYN LI++Y AM+ N M + GCEP T+ T++ + G + A
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMD 450
Query: 174 VFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
++ R+Q+ G++P+T Y+ +++ KA + A+ L+ EM G+G +P+ VTFNI++ H
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
Query: 234 KYGRNGE 240
K RN E
Sbjct: 511 K-ARNYE 516
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ + + EA++V ++M++ G P L + + G +++ M
Sbjct: 398 NRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQE 457
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P + T++V+I + L L M GC P+ T+NI+I +
Sbjct: 458 AGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYET 517
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ M G +P T+S +M L G + EA VF +Q P+ +Y L+D
Sbjct: 518 ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 577
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ KA + +A Y+ M G+ P+ T N L+ + R E
Sbjct: 578 LWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSE 622
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 97/221 (43%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D TL+ G + A+D+ RM++ G+ P +++ L + G + +
Sbjct: 426 EPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHR 485
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF +M+ +G P+ VTFN+MI + + L M G PD TY+I++
Sbjct: 486 LFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLG 545
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G A M + P + ++ + GNV +A + + + G+ PN
Sbjct: 546 HCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVP 605
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
N+L+ +++ + +A L + M G+ P T+ +L+
Sbjct: 606 TCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 89/223 (39%), Gaps = 14/223 (6%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
++ D + +M + G + EA V M+ P +L L + G+ W
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ ++ ML+ G RP+ T N ++ F R + +LL M G P TY +L++
Sbjct: 590 QWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSC- 648
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ---DMGIA 184
C +++ M + +M P+ M L + +KV D + D +
Sbjct: 649 CTDARSNFDMGFCGQLMAVSGHPAH------MFLLKMPPAGPDGQKVRDHVSNFLDFMHS 702
Query: 185 PNTTIYNTLMDGYV----KAREIGQANMLYEEMRGKGVSPDCV 223
+ LMD V K+ +A ++E GK V PD +
Sbjct: 703 EDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDAL 745
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 35/262 (13%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V N+L+ G+ + EAL V M G++P ++ T + R+ + G LF M
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK-----------------FGC--- 113
+ G P ++ + +I FC+ +G L LM + F C
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 617
Query: 114 ---------------DPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
+PD TYN +I YC + A ++ P+ T + +
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+H LC+ ++ A ++F + + G PN Y LMD + K+ +I + L+EEM+ KG+
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 219 SPDCVTFNILVGGHYKYGRNGE 240
SP V+++I++ G K GR E
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDE 759
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 100/224 (44%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
TL+ GF G + A D+ M G+ P L A + L + G G KLF L K
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G + V F+ I + + L + M G P+ TY ILI C G+ A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
++K G EPS+ T+S+++ C+ GN+ +++ + MG P+ IY L+DG
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
K + A +M G+ + + V FN L+ G + R E
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N +++G L+V I A +L + D G P++ L + G+ + LFK M +
Sbjct: 256 NKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ 314
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G P + ++ +I G+ + L +G L G D ++ I+ Y G +
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A M+ G P++ T++ ++ LC++G + EA ++ +I G+ P+ Y++L+D
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
G+ K + LYE+M G PD V + +LV G K G
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 3/209 (1%)
Query: 29 FEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVM 88
+ D++ R + + ++ ++ LL + K F +++ P VT+N M
Sbjct: 586 LQLFDLMQRNK---ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 89 ICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC 148
ICG+C + L E + L+ P+ T ILI+ C A+ ++M + G
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 149 EPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANM 208
+P+ T+ +M + ++ + K+F+ +Q+ GI+P+ Y+ ++DG K + +A
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 209 LYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++ + + PD V + IL+ G+ K GR
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGR 791
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 6/230 (2%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPS-LSAITILFRLLLRVGDYGSVW 67
+S + +LN+L+ G V +I + D L R G+ PS +SA + L G+
Sbjct: 182 DSVYRMLNSLI-GSDRVDLIADHFDKLCRG---GIEPSGVSAHGFVLDALFCKGEVTKAL 237
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ ++ +G R V+ N ++ G Q + V LL L+ G P+ T+ LIN +
Sbjct: 238 DFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGF 296
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C +G+ A D +M + G EP + +ST++ + G + K+F + G+ +
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++++ +D YVK+ ++ A+++Y+ M +G+SP+ VT+ IL+ G + GR
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 108/231 (46%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
H + D V ++ + ++ G + A V RM G+ P++ TIL + L + G
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+ ++ +L++G PS VT++ +I GFC+ L G +L M K G PD Y +L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
+ +G AM + M+ ++ F++++ CR EA KVF + GI
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
P+ + T+M + + +A L+ M G+ PD + + L+ K+
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 70/282 (24%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L++G G I+EA + ++ G+ PS+ + L + G+ S + L++DM++ G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 78 PRP-----------------------------------SSVTFNVMICGFCR----QQGL 98
P + V FN +I G+CR + L
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 99 VVG----------------------------ESLLHL---MPKFGCDPDAFTYNILINAY 127
V E L L M K G +PDA Y LI+A+
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C K ++ + ++M +N +A + ++H L + + +A K F+ + + + P+
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 636
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
YNT++ GY R + +A ++E ++ P+ VT IL+
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 87/185 (47%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D NT++ G+ ++ + EA + ++ P+ +TIL +L + D +
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+F M KG +P++VT+ ++ F + + L M + G P +Y+I+I+ C
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+G+ A + + + P + ++ ++ C+ G ++EA +++ + G+ P+
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Query: 189 IYNTL 193
+ L
Sbjct: 813 LQRAL 817
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Query: 112 GCDPDAFT-YNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIE 170
G +P + + +++A KG+ + A+D+ ++M+ G + + + ++ L + +
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269
Query: 171 ARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
A ++ + D G APN + TL++G+ K E+ +A L++ M +G+ PD + ++ L+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 231 GHYKYGRNG 239
G++K G G
Sbjct: 330 GYFKAGMLG 338
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL+ G+ +G + EA + + G P T R + + +K+F
Sbjct: 154 DIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVF 213
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K+M + G + V++ +I G + + SLL M C P+ TY +LI+A C
Sbjct: 214 KEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGS 273
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ S AM+ M ++G +P ++ ++ + C + EA + + + + G+ PN Y
Sbjct: 274 GQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITY 333
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N L+ G+ K + + +A L +M + + PD +T+N L+ G G
Sbjct: 334 NALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 53 LFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG 112
L L R G + +L+ +ML P TFN ++ G+C+ +V + + + + G
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 113 CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE----------------------- 149
CDPD FTY I +C + + A M +NGC
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 150 ------------PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
P++ T++ ++ ALC G EA +F ++ + GI P+ +Y L+ +
Sbjct: 246 SLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSF 305
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+ +A+ L E M G+ P+ +T+N L+ G K
Sbjct: 306 CSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK 342
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ G I EAL +L +M+D P++ T+L L G LFK M G
Sbjct: 231 LIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG 290
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+P + V+I FC L LL M + G P+ TYN LI +C K AM
Sbjct: 291 IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAM 349
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
L+ M++ P + T++T++ C GN+ A ++ +++ G+ PN
Sbjct: 350 GLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%)
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV 174
PD +T+N L+N YC G A ++ +++ GC+P T+++ + CR V A KV
Sbjct: 153 PDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKV 212
Query: 175 FDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
F + G N Y L+ G +A++I +A L +M+ P+ T+ +L+
Sbjct: 213 FKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 235 YGRNGE 240
G+ E
Sbjct: 273 SGQKSE 278
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ G EA+++ +M + G++P T+L + L + ML G
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENG 325
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P+ +T+N +I GFC++ + LL M + PD TYN LI C G A
Sbjct: 326 LMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAY 384
Query: 138 DWLNMMMKNGCEPSMAT 154
L++M ++G P+ T
Sbjct: 385 RLLSLMEESGLVPNQRT 401
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 53/98 (54%)
Query: 143 MMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKARE 202
M+++ P + TF+T+++ C+ G V+EA++ + G P+ Y + + G+ + +E
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKE 205
Query: 203 IGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ A +++EM G + V++ L+ G ++ + E
Sbjct: 206 VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDE 243
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 16/242 (6%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
+++ R + G +A V+ M G P S + + L + LF++M
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
R G T+ +M+ FC+ + + M + GC P+ TY LI+AY K S
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI---------------- 178
A + M+ GC P++ T+S ++ C+ G V +A ++F+R+
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQY 630
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
D PN Y L+DG+ K+ + +A L + M +G P+ + ++ L+ G K G+
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690
Query: 239 GE 240
E
Sbjct: 691 DE 692
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 41/263 (15%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+TL+ G LN + VL+ M G PS L GD+ +KL K M++
Sbjct: 341 STLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400
Query: 76 KGPRPSSVTFNVMICGFCRQQ---------------------GLVVGE------------ 102
G P V +N++I C + G+V+ +
Sbjct: 401 CGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460
Query: 103 --------SLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMAT 154
S++ M G PD TY+ ++N C K +A M + G + T
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
++ ++ + C+ G + +ARK F+ ++++G PN Y L+ Y+KA+++ AN L+E M
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 215 GKGVSPDCVTFNILVGGHYKYGR 237
+G P+ VT++ L+ GH K G+
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQ 603
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%)
Query: 23 LNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSS 82
LN ++ A M GV + ++ R L G Y + + ++M+ +G P +
Sbjct: 424 LNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDT 483
Query: 83 VTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNM 142
T++ ++ C + + L M + G D +TY I+++++C G A W N
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 143 MMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKARE 202
M + GC P++ T++ ++HA + V A ++F+ + G PN Y+ L+DG+ KA +
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 203 IGQANMLYEEMRGKGVSPD 221
+ +A ++E M G PD
Sbjct: 604 VEKACQIFERMCGSKDVPD 622
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 109/247 (44%), Gaps = 16/247 (6%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
+D ++ F G+I +A + MR+VG P++ T L L+ +L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCR----QQGLVVGESLLHLMPKFGCD----------- 114
F+ ML +G P+ VT++ +I G C+ ++ + E + D
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 115 -PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
P+ TY L++ +C + A L+ M GCEP+ + ++ LC+ G + EA++
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 174 VFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
V + + G Y++L+D Y K + A+ + +M +P+ V + ++ G
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 234 KYGRNGE 240
K G+ E
Sbjct: 756 KVGKTDE 762
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 31/263 (11%)
Query: 7 EYESDFSVLNTLM-RGFL--------------NVGMIFEALDVLHRMRDVGVRPSLSAIT 51
+YE FSV+ ++ +GF+ N + A + M+ G+ + T
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 52 ILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF 111
I+ + G K F +M G P+ VT+ +I + + + + L M
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 112 GCDPDAFTYNILINAYCIKGKTSVAMDWLNMMM----------------KNGCEPSMATF 155
GC P+ TY+ LI+ +C G+ A M N P++ T+
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
++ C+ V EARK+ D + G PN +Y+ L+DG K ++ +A + EM
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 216 KGVSPDCVTFNILVGGHYKYGRN 238
G T++ L+ ++K R
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQ 725
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 7/219 (3%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
LN L+R G AL+ L R++D RPS S L + L+ S + ++M
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGE--SLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
R T C+ VG+ L L+ PD Y LI+ C
Sbjct: 263 LANLRMDGFTLRCFAYSLCK-----VGKWREALTLVETENFVPDTVFYTKLISGLCEASL 317
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
AMD+LN M C P++ T+ST++ + + ++V + + G P+ I+N+
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
L+ Y + + A L ++M G P V +NIL+G
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
L+ GF + EA +L M G P+ L L +VG ++ +M
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G + T++ +I + + + + +L M + C P+ Y +I+ C GKT A
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ MM + GC+P++ T++ ++ G + ++ +R+ G+APN Y L+D
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 823
Query: 197 YVKAREIGQANMLYEEMR 214
K + A+ L EEM+
Sbjct: 824 CCKNGALDVAHNLLEEMK 841
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 2/224 (0%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V + L+ G VG + EA +V M + G +L + L +V K+ M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L P+ V + MI G C+ L+ +M + GC P+ TY +I+ + + GK
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
++ L M G P+ T+ ++ C+ G + A + + ++ +T Y +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++G+ K E ++ L +E+ +P + +L+ K R
Sbjct: 856 IEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQR 897
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 41/198 (20%)
Query: 80 PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDW 139
P+ VT++ ++CG ++ L + +L++M GC P +N L++AYC G S A
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394
Query: 140 LNMMMKNGCEPSMATFSTIMHALCREGNVIEA---------------------------- 171
L M+K G P ++ ++ ++C + + +
Sbjct: 395 LKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454
Query: 172 ----------RKVFDRIQDM---GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
K F I++M G P+T+ Y+ +++ A ++ A +L+EEM+ G+
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 514
Query: 219 SPDCVTFNILVGGHYKYG 236
D T+ I+V K G
Sbjct: 515 VADVYTYTIMVDSFCKAG 532
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 3/204 (1%)
Query: 33 DVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGF 92
+ L ++RD + +L R R G + + + RPS T+N +I F
Sbjct: 186 EFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAF 245
Query: 93 CRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSM 152
+ L + M D FT + C GK A L ++ P
Sbjct: 246 LKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA---LTLVETENFVPDT 302
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
++ ++ LC EA +R++ PN Y+TL+ G + +++G+ +
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 362
Query: 213 MRGKGVSPDCVTFNILVGGHYKYG 236
M +G P FN LV + G
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSG 386
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 1/227 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ + G++ E++ + +M+D+GV ++ + LF+++LR G Y + F
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M+ +G P+ T+N+M+ GF L M G PD T+N +IN +C
Sbjct: 244 NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRF 303
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K A M N PS+ +++T++ V + ++F+ ++ GI PN T Y
Sbjct: 304 KKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY 363
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSP-DCVTFNILVGGHYKYG 236
+TL+ G A ++ +A + + M K ++P D F L+ K G
Sbjct: 364 STLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAG 410
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 79/166 (47%)
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
DM KG F V+I + + + + M G + +YN L +G
Sbjct: 175 DMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRG 234
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
+ +A + N M+ G EP+ T++ ++ + A + F+ ++ GI+P+ +N
Sbjct: 235 RYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFN 294
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
T+++G+ + +++ +A L+ EM+G + P V++ ++ G+ R
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 68/133 (51%)
Query: 108 MPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGN 167
MP+ G D + +LI +Y G ++ M G E ++ +++++ + R G
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 168 VIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
+ A++ F+++ G+ P YN ++ G+ + + A +E+M+ +G+SPD TFN
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 228 LVGGHYKYGRNGE 240
++ G ++ + E
Sbjct: 296 MINGFCRFKKMDE 308
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 18/242 (7%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLL---RVGDYGS 65
E + + +TL+ G + G + EA ++L M + P + +I +LL+ + GD +
Sbjct: 357 EPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDN--SIFLKLLVSQSKAGDMAA 414
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQG----------LVVGESLLHLMPKFGCDP 115
++ K M + + V+I C+ L+ E +L +P
Sbjct: 415 ATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP 474
Query: 116 DAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF 175
A YN +I C G+T+ A +MK G + A + ++ +EGN + ++
Sbjct: 475 SA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDA-LNNLIRGHAKEGNPDSSYEIL 531
Query: 176 DRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
+ G+ + Y L+ Y+ E G A + M G PD F ++ ++
Sbjct: 532 KIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFED 591
Query: 236 GR 237
GR
Sbjct: 592 GR 593
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 1/228 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ G N G + E L+++ M+ + ++P + L +G KL
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGL-VVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
+ M G + + VT N+ + C+++ V + L+ G PD TY+ LI AY
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G S A++ + M + G + + T +TI+ ALC+E + EA + + G +
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y TL+ G+ + ++ +A +++EM+ ++P TFN L+GG +G+
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK 536
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 119/232 (51%), Gaps = 4/232 (1%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD---YGSVWKL 69
++ + + +L+ G AL + +M + ++P+L L L+R S ++
Sbjct: 132 ALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREV 191
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLM-PKFGCDPDAFTYNILINAYC 128
F DM++ G + TFNV++ G+C + L +L M +F +PD TYN ++ A
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS 251
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
KG+ S + L M KNG P+ T++ +++ C+ G++ EA ++ + ++ + P+
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
YN L++G A + + L + M+ + PD VT+N L+ G ++ G + E
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 36/264 (13%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVR------------------------ 44
+ D NTL+ G +G+ EA ++ +M + GV+
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTR 401
Query: 45 ------------PSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGF 92
P + L + L+VGD ++ ++M +KG + +++T N ++
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Query: 93 CRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSM 152
C+++ L +LL+ K G D TY LI + + K A++ + M K P++
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
+TF++++ LC G A + FD + + G+ P+ + +N+++ GY K + +A Y E
Sbjct: 522 STFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Query: 213 MRGKGVSPDCVTFNILVGGHYKYG 236
PD T NIL+ G K G
Sbjct: 582 SIKHSFKPDNYTCNILLNGLCKEG 605
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 4/202 (1%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
+LH + PS + I L G ++F+ M+R +P+ +T N ++ G
Sbjct: 118 LLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177
Query: 94 RQQ---GLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN-GCE 149
R + + M K G + T+N+L+N YC++GK A+ L M+
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVN 237
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P T++TI+ A+ ++G + + +++ ++ G+ PN YN L+ GY K + +A +
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 210 YEEMRGKGVSPDCVTFNILVGG 231
E M+ V PD T+NIL+ G
Sbjct: 298 VELMKQTNVLPDLCTYNILING 319
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 34/269 (12%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D +TL++ +L VG + AL+++ M G++ + + + L +
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L ++G VT+ +I GF R++ + + M K P T+N LI
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP-- 185
C GKT +AM+ + + ++G P +TF++I+ C+EG V +A + ++ P
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 186 --------------------------------NTTIYNTLMDGYVKAREIGQANMLYEEM 213
+T YNT++ + K +++ +A L EM
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651
Query: 214 RGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
KG+ PD T+N + + G+ E +
Sbjct: 652 EEKGLEPDRFTYNSFISLLMEDGKLSETD 680
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
TL+ GF + +AL++ M+ V + P++S L L G + F ++
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES 550
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G P TFN +I G+C++ + + K PD +T NIL+N C +G T A
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+++ N +++ E T++T++ A C++ + EA + +++ G+ P+ YN+ +
Sbjct: 611 LNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Query: 197 YVKAREIGQANMLYEEMRGK 216
++ ++ + + L ++ GK
Sbjct: 670 LMEDGKLSETDELLKKFSGK 689
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 3/218 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NT+++ G + + ++L M+ G+ P+ L ++G +++ + M +
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P T+N++I G C + G L+ M PD TYN LI+ G +
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEA--RKVFDRIQDMGIAPNTTIYNTL 193
A + M +G + + T + + LC+E EA RKV + + G +P+ Y+TL
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKR-EAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ Y+K ++ A + EM KG+ + +T N ++
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 97 GLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFS 156
L + SLLH P ++I ++AY +GK VA+ M++ +P++ T +
Sbjct: 111 SLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCN 170
Query: 157 TIMHALCR---EGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM 213
T++ L R ++ AR+VFD + +G++ N +N L++GY ++ A + E M
Sbjct: 171 TLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERM 230
Query: 214 RGK-GVSPDCVTFNILVGGHYKYGR 237
+ V+PD VT+N ++ K GR
Sbjct: 231 VSEFKVNPDNVTYNTILKAMSKKGR 255
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 3/229 (1%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
+N E D + +R G + EA D++ + + P L + L + D
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 65 SVWKLFKDMLRKG--PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
V++ F D +R +P V+F ++I C + L L+ + G PD F YN
Sbjct: 212 VVYE-FVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNT 270
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
++ +C K S A+ M + G EP T++T++ L + G V EAR + D G
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
P+T Y +LM+G + E A L EEM +G +P+ T+N L+ G
Sbjct: 331 YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 24 NVGMIFEALDVLHRMRD-VGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSS 82
++ +++E +D MRD V+P L + TIL + + L + G +P
Sbjct: 209 DLHVVYEFVD---EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 83 VTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNM 142
+N ++ GFC + M + G +PD TYN LI G+ A +L
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 143 MMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKARE 202
M+ G EP AT++++M+ +CR+G + A + + ++ G APN YNTL+ G KAR
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL 385
Query: 203 IGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ + LYE M+ GV + + LV K G+ E
Sbjct: 386 MDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAE 423
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 112/235 (47%), Gaps = 5/235 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRM--RDVGVRPSLSAITILFRLLLRVGDYG--SV 66
D N++++ + ++ ++ + + + + RP S IL R D +V
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
++ M+ G P VT ++ + C + + L+ + + PD +TYN L+
Sbjct: 144 HRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKH 203
Query: 127 YCIKGKTSVAMDWLNMMMKN-GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
C V ++++ M + +P + +F+ ++ +C N+ EA + ++ + G P
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ +YNT+M G+ + +A +Y++M+ +GV PD +T+N L+ G K GR E
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEE 318
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
++ D + NT+M+GF + EA+ V +M++ GV P L L + G
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
K M+ G P + T+ ++ G CR+ + SLL M GC P+ TYN L++
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C M+ MM +G + ++T++ +L + G V EA +VFD D +
Sbjct: 381 CKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDA 440
Query: 188 TIYNTL---MDGYVKAREIG 204
+ Y+TL + KA+E G
Sbjct: 441 SAYSTLETTLKWLKKAKEQG 460
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Query: 6 NEYESDFSV------LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLR 59
+E DF V L+ N + EA+ ++ ++ + G +P + +
Sbjct: 218 DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCT 277
Query: 60 VGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFT 119
+ ++K M +G P +T+N +I G + + L M G +PD T
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 120 YNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ 179
Y L+N C KG++ A+ L M GC P+ T++T++H LC+ + + ++++ ++
Sbjct: 338 YTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMK 397
Query: 180 DMGIAPNTTIYNTLMDGYVKAREIGQANMLYE 211
G+ + Y TL+ VK+ ++ +A +++
Sbjct: 398 SSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ G+ V + EA + + M D G++P + A ++ LLR KLF M KG
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG 363
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P P+ ++ +MI FC+Q + M G PDA Y LI + + K
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ L M + G P T++ ++ + + A ++++++ I P+ +N +M Y
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
AR ++EEM KG+ PD ++ +L+ G G++ E
Sbjct: 484 FMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSRE 526
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N ++ G L +A+ + H M+ G P++ + TI+ R + + + F
Sbjct: 332 DIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF 391
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
DM+ G +P + + +I GF Q+ L LL M + G PD TYN LI +
Sbjct: 392 DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
A N M++N EPS+ TF+ IM + N R V++ + GI P+ Y
Sbjct: 452 KMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSY 511
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
L+ G + + +A EEM KG+ + +N ++ G+
Sbjct: 512 TVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 19 MRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGP 78
M+ F +A+ + M+ + + I L L R G ++ D L++
Sbjct: 236 MKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKLKERF 294
Query: 79 RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD 138
P+ +T+ V++ G+CR + L+ + + M G PD +N+++ K S A+
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK 354
Query: 139 WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYV 198
++M G P++ +++ ++ C++ ++ A + FD + D G+ P+ +Y L+ G+
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 199 KAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+++ L +EM+ KG PD T+N L+
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 45 PSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESL 104
P++ T+L RV + +++ DM+ +G +P V NVM+ G R + L
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 105 LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR 164
H+M G P+ +Y I+I +C + A+++ + M+ +G +P A ++ ++
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 165 EGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVT 224
+ + ++ +Q+ G P+ YN L+ + A +Y +M + P T
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 225 FNILVGGHYKYGRNGE 240
FN+++ ++ RN E
Sbjct: 476 FNMIMKSYF-MARNYE 490
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+++ G EA+++L ++ + GV +F L ++ + LF+ M +
Sbjct: 412 SMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
GP P T+N++I F R + ++ + + C PD +YN LIN G A
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
M + G P + T+ST+M + V A +F+ + G PN YN L+D
Sbjct: 532 HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC 591
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
K +A LY +M+ +G++PD +T+ +L
Sbjct: 592 LEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 67/292 (22%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLL----------------- 58
NTLM+ M+ +A+ V RM + G RP+ ++L LL+
Sbjct: 309 NTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR 368
Query: 59 ---------------RVGDYGSVWKLFKDMLR---KGPRPSSVTFNVMICGFCR------ 94
++G +LF DM KG R S ++ +CG +
Sbjct: 369 YMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIE 428
Query: 95 ------QQGLVVG--------------------ESLLHLMPKFGCDPDAFTYNILINAYC 128
++G+V L M K G PD FTYNILI ++
Sbjct: 429 MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G+ A++ + ++ C+P + +++++++ L + G+V EA F +Q+ G+ P+
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y+TLM+ + K + A L+EEM KG P+ VT+NIL+ K GR E
Sbjct: 549 TYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 35/243 (14%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A V M+ R TI+ R + R+G LF +M+ +G + V +N ++
Sbjct: 253 KACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLM 312
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN------------------------ 125
+ + + + M + GC P+ +TY++L+N
Sbjct: 313 QVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQ 372
Query: 126 ---AYCIK-----GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR 177
+Y ++ G S A M + ++ +++ +LC G IEA ++ +
Sbjct: 373 GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
I + G+ +T +YNT+ K ++I + L+E+M+ G SPD T+NIL+ +GR
Sbjct: 433 IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIAS---FGR 489
Query: 238 NGE 240
GE
Sbjct: 490 VGE 492
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ F VG + EA+++ + +P + + L L + GD F
Sbjct: 476 DIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRF 535
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K+M KG P VT++ ++ F + + + + SL M GC P+ TYNIL++
Sbjct: 536 KEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKN 595
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTI 158
G+T+ A+D + M + G P T++ +
Sbjct: 596 GRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 53 LFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG 112
L + LR DY + ++ ++ R G + +N+++ + + + M K
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKAC---QVFEDMKKRH 265
Query: 113 CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEAR 172
C D +TY I+I GK A+ N M+ G ++ ++T+M L + V +A
Sbjct: 266 CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 173 KVFDRIQDMGIAPNTTIYNTLMD 195
+VF R+ + G PN Y+ L++
Sbjct: 326 QVFSRMVETGCRPNEYTYSLLLN 348
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 2/227 (0%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRM-RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
L++L++G G F+ALD+ ++M R G++P++ A L + G+ +F M
Sbjct: 319 LSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
G P+ T+ +I GF ++ L + + M GC P+ Y ++ A C K
Sbjct: 379 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI-QDMGIAPNTTIYNT 192
A + +M K C PS+ TF+ + LC G + A KVF ++ Q PN YN
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNE 498
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
L+DG KA I +A L E+ +GV T+N L+ G G G
Sbjct: 499 LLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL++GF + G I +A+ V M ++G P++ L + G ++ ML
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P+ V + M+ CR ESL+ +M K C P T+N I C G+
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR--- 472
Query: 136 AMDWL-----NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+DW M ++ C P++ T++ ++ L + + EA + I G+ +++ Y
Sbjct: 473 -LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTY 531
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
NTL+ G A G A L +M G SPD +T N+++ + K G+
Sbjct: 532 NTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 2/227 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+TL+ N G I A L +M G P++ ++ L + G L+ M+R
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 76 K-GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
G +P+ V +N ++ GFC +V S+ M + GC P+ TY LIN + +G
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A+ N M+ +GC P++ ++ ++ ALCR EA + + + AP+ +N +
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464
Query: 195 DGYVKAREIGQANMLYEEMRGKG-VSPDCVTFNILVGGHYKYGRNGE 240
G A + A ++ +M + P+ VT+N L+ G K R E
Sbjct: 465 KGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 10/232 (4%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E + N L++ + A +L M + G P + T + + VG
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG------ 230
Query: 68 KLFKDMLRKGPR--PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
L K+ R P +N +I G C++ L+ M + G P+ +Y+ LIN
Sbjct: 231 -LVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR-IQDMGIA 184
C G+ +A +L M+K GC P++ T S+++ G +A ++++ I+ G+
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
PN YNTL+ G+ I +A ++ M G SP+ T+ L+ G K G
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 109/220 (49%), Gaps = 5/220 (2%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+++ + VG+ A+++ +R+++ G PS+ + LL ++ +++DM R
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 175
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G P+ T+NV++ C+ + + LL M GC PDA +Y +I++ C G
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ + EP ++ ++ +++ LC+E + A ++ + + GI+PN Y+TL++
Sbjct: 236 RE-----LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ +I A +M +G P+ T + LV G + G
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG 330
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 96/251 (38%), Gaps = 38/251 (15%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+L+ GF G + A+ + ++M G P++ T + L R + L + M ++
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK-FGCDPD------------------- 116
PS TFN I G C L E + M + C P+
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 117 ----------------AFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
+ TYN L++ C G +A+ + MM +G P T + I+
Sbjct: 512 AYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIIL 571
Query: 161 ALCREGNVIEARKVFDRIQ--DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
A C++G A ++ D + P+ Y ++ G ++ +L E M G+
Sbjct: 572 AYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGI 631
Query: 219 SPDCVTFNILV 229
P T+++L+
Sbjct: 632 VPSIATWSVLI 642
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVG-VRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
N ++G + G + A V +M P++ L L + + L +++
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+G SS T+N ++ G C + L+ M G PD T N++I AYC +GK
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKA 579
Query: 134 SVAMDWLNMMM--KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
A L+++ + P + +++ ++ LCR + + +R+ GI P+ ++
Sbjct: 580 ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639
Query: 192 TLMDGYV 198
L++ ++
Sbjct: 640 VLINCFI 646
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 4/160 (2%)
Query: 79 RPSSVTFNVMICGFCRQQGLVVGESLLHLMP--KFGCDPDAFTYNILINAYCIKGKTSVA 136
+ + +TF VMI + + LL M F C D F +I+ Y G A
Sbjct: 73 KHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS--VISVYRQVGLAERA 130
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
++ + + GC+PS+ ++ ++ L E + V+ ++ G PN YN L+
Sbjct: 131 VEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKA 190
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
K ++ A L EM KG PD V++ ++ + G
Sbjct: 191 LCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 100/224 (44%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
TL+ GF G + A D+ M G+ P L A + L + G G KLF L K
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G + V F+ I + + L + M G P+ TY ILI C G+ A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
++K G EPS+ T+S+++ C+ GN+ +++ + MG P+ IY L+DG
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
K + A +M G+ + + V FN L+ G + R E
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N +++G L+V I A +L + D G P++ L + G+ + LFK M +
Sbjct: 256 NKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ 314
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G P + ++ +I G+ + L +G L G D ++ I+ Y G +
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A M+ G P++ T++ ++ LC++G + EA ++ +I G+ P+ Y++L+D
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
G+ K + LYE+M G PD V + +LV G K G
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 3/209 (1%)
Query: 29 FEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVM 88
+ D++ R + + ++ ++ LL + K F +++ P VT+N M
Sbjct: 557 LQLFDLMQRNK---ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 613
Query: 89 ICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC 148
ICG+C + L E + L+ P+ T ILI+ C A+ ++M + G
Sbjct: 614 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 673
Query: 149 EPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANM 208
+P+ T+ +M + ++ + K+F+ +Q+ GI+P+ Y+ ++DG K + +A
Sbjct: 674 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 733
Query: 209 LYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++ + + PD V + IL+ G+ K GR
Sbjct: 734 IFHQAIDAKLLPDVVAYAILIRGYCKVGR 762
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 6/230 (2%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPS-LSAITILFRLLLRVGDYGSVW 67
+S + +LN+L+ G V +I + D L R G+ PS +SA + L G+
Sbjct: 182 DSVYRMLNSLI-GSDRVDLIADHFDKLCRG---GIEPSGVSAHGFVLDALFCKGEVTKAL 237
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ ++ +G R V+ N ++ G Q + V LL L+ G P+ T+ LIN +
Sbjct: 238 DFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGF 296
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C +G+ A D +M + G EP + +ST++ + G + K+F + G+ +
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++++ +D YVK+ ++ A+++Y+ M +G+SP+ VT+ IL+ G + GR
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK----- 68
V N+L+ G+ + EAL V M G++P ++ T + R+ + + K
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL 557
Query: 69 -LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
LF M R NV+I + + + + + +PD TYN +I Y
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C + A ++ P+ T + ++H LC+ ++ A ++F + + G PN
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y LMD + K+ +I + L+EEM+ KG+SP V+++I++ G K GR E
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 730
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
H + D V ++ + ++ G + A V RM G+ P++ TIL + L + G
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+ ++ +L++G PS VT++ +I GFC+ L G +L M K G PD Y +L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
+ +G AM + M+ ++ F++++ CR EA KVF + GI
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 185 PNTTIYNTLM------DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
P+ + T+M D + K + L++ M+ +S D N+++ +K R
Sbjct: 529 PDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 587
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 87/185 (47%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D NT++ G+ ++ + EA + ++ P+ +TIL +L + D +
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+F M KG +P++VT+ ++ F + + L M + G P +Y+I+I+ C
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+G+ A + + + P + ++ ++ C+ G ++EA +++ + G+ P+
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Query: 189 IYNTL 193
+ L
Sbjct: 784 LQRAL 788
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Query: 112 GCDPDAFT-YNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIE 170
G +P + + +++A KG+ + A+D+ ++M+ G + + + ++ L + +
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269
Query: 171 ARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
A ++ + D G APN + TL++G+ K E+ +A L++ M +G+ PD + ++ L+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 231 GHYKYGRNG 239
G++K G G
Sbjct: 330 GYFKAGMLG 338
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%)
Query: 21 GFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRP 80
G + + E DV+ MR RP+ SA T L V + LF+ M G P
Sbjct: 142 GCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEP 201
Query: 81 SSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL 140
+ F +I GF ++ + SLL M D D YN+ I+++ GK +A +
Sbjct: 202 TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF 261
Query: 141 NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKA 200
+ + NG +P T+++++ LC+ + EA ++F+ ++ P T YNT++ GY A
Sbjct: 262 HEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSA 321
Query: 201 REIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ +A L E R KG P + +N ++ K G+ E
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 1 MWQNHNE--YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLL 58
++Q E YE + TL+RGF G + AL +L M+ SL A +L+ + +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS----SSLDADIVLYNVCI 245
Query: 59 ----RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCD 114
+VG WK F ++ G +P VT+ MI C+ L + + K
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV 174
P + YN +I Y GK A L G PS+ ++ I+ L + G V EA KV
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV 365
Query: 175 FDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
F+ ++ APN + YN L+D +A ++ A L + M+ G+ P+ T NI+V
Sbjct: 366 FEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V +L++ F N G + + M + P L + + + G+ +F+++
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ P + +++++I G + L + M + GC D YNI+I+ +C GK
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ A L M G EP++ T+ +++ L + + EA +F+ + I N IY++L
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+DG+ K I +A ++ EE+ KG++P+ T+N L+ K
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 1/225 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N ++ +G + EAL V M+ P+LS IL +L R G + ++L M +
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P+ T N+M+ C+ Q L ++ M C PD T+ LI+ G+
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A M+ + C + +++++ G + K++ + + +P+ + NT MD
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
KA E + ++EE++ + PD +++IL+ G K G E
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 106/230 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ G + G E ++ + M++ G A I+ + G ++L
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++M KG P+ VT+ +I G + L L + + Y+ LI+ +
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ A L +M+ G P++ T+++++ AL + + EA F ++++ PN Y
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
L++G K R+ +A + ++EM+ +G+ P +++ ++ G K G E
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 35/243 (14%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPS----------------LSAITILF 54
D N ++ GF G + +A +L M+ G P+ L +LF
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 55 ------RLLLRVGDYGSV-------------WKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
R+ L V Y S+ + + +++++KG P+ T+N ++ +
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ + M + C P+ TY ILIN C K + A + M K G +PS ++
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+T++ L + GN+ EA +FDR + G P++ YN +++G A L+EE R
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 216 KGV 218
+G+
Sbjct: 826 RGL 828
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 2/225 (0%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+L+ G VG + +A V +M D R + T L + G K++KDM+ +
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 77 GPRPSSVTFNV-MICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P N M C F + G ++ + PDA +Y+ILI+ G +
Sbjct: 512 NCSPDLQLLNTYMDCMF-KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
+ M + GC ++ ++ C+ G V +A ++ + ++ G P Y +++D
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
G K + +A ML+EE + K + + V ++ L+ G K GR E
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 1/223 (0%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
++ FS TL+ F V L + +M+++G P++ T L R + G S
Sbjct: 163 KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
L +M V +NV I F + + + H + G PD TY +I
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
C + A++ + KN P ++T++ G EA + +R + G P+
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
YN ++ K ++ +A ++EEM+ K +P+ T+NIL+
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILI 384
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%)
Query: 53 LFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG 112
L ++ R ++ ++ ++ +M G PS T M+ G + L G ++ +M KF
Sbjct: 104 LLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFK 163
Query: 113 CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEAR 172
P Y LI A+ + + + M + G EP++ F+T++ +EG V A
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 173 KVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+ D ++ + + +YN +D + K ++ A + E+ G+ PD VT+ ++G
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 233 YKYGRNGE 240
K R E
Sbjct: 284 CKANRLDE 291
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 36/222 (16%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NT++ G+ + G EA +L R R G PS+ A + L ++G K+F++M +
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P+ TYNILI+ C GK
Sbjct: 372 DAA------------------------------------PNLSTYNILIDMLCRAGKLDT 395
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + + M K G P++ T + ++ LC+ + EA +F+ + P+ + +L+D
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
G K + A +YE+M + + + L+ + +GR
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%), Gaps = 3/184 (1%)
Query: 56 LLLRVGDYGSVWKLFKDMLRKGPRPS-SVTFNVMICGFCRQQGLVVGESLLHLMPKFGCD 114
+L R+ D + F+ R+ P ++N ++ R + + +L M G
Sbjct: 71 VLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFG 130
Query: 115 PDAFTYNILINAYCIKG-KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
P T I + C+K K D + MM K P+ + ++T++ A +
Sbjct: 131 PSVNTC-IEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189
Query: 174 VFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
+F ++Q++G P ++ TL+ G+ K + A L +EM+ + D V +N+ +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 234 KYGR 237
K G+
Sbjct: 250 KVGK 253
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
+L+ G+ VG + EA VL +M + G P + T L G + L +DM
Sbjct: 255 FTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMR 314
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
R+G P++ + V+I C+ + + M ++ C+ D TY L++ +C GK
Sbjct: 315 RRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKID 374
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
L+ M+K G PS T+ IM A ++ + E ++ ++++ + P+ IYN ++
Sbjct: 375 KCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVI 434
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
K E+ +A L+ EM G+SP TF I++ G
Sbjct: 435 RLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 471
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 1/218 (0%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
L++ F + M+ +A++VL M G P L L + G KLF+DM +
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR 247
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
P + F ++ G+CR ++ + +L M + G +PD Y L++ Y GK + A
Sbjct: 248 FP-VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
D L M + G EP+ ++ ++ ALC+ + EA KVF ++ + Y L+ G
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+ K +I + ++ ++M KG+ P +T+ ++ H K
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 4/197 (2%)
Query: 46 SLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPR-PSSVTFNVMICGFCRQQGLVVGESL 104
S+ + ++L ++ +G+VW L ++M ++ P+ F V++ F + +
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 105 LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL-NMMMKNGCEPSMATFSTIMHALC 163
L MPKFG +PD + + L++A C G A +M M+ ++ F+++++ C
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV--NLRYFTSLLYGWC 263
Query: 164 REGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCV 223
R G ++EA+ V ++ + G P+ Y L+ GY A ++ A L +MR +G P+
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN 323
Query: 224 TFNILVGGHYKYGRNGE 240
+ +L+ K R E
Sbjct: 324 CYTVLIQALCKVDRMEE 340
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
N +E D L+ G+ N G + +A D+L MR G P+ + T+L + L +V
Sbjct: 279 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 338
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
K+F +M R VT+ ++ GFC+ + +L M K G P TY +
Sbjct: 339 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHI 398
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
+ A+ K ++ + M + P + ++ ++ C+ G V EA ++++ +++ G+
Sbjct: 399 MVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGL 458
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+P + +++G + +A+ ++EM +G+
Sbjct: 459 SPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 3/188 (1%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
E L+++ +MR + P + ++ RL ++G+ +L+ +M G P TF +MI
Sbjct: 410 ECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Query: 90 CGFCRQQGLVVGESLLHLMPKFG--CDPDAFTYNILINAYCIKGKTSVAMD-WLNMMMKN 146
G Q L+ M G T +L+N K +A D W + K
Sbjct: 470 NGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKG 529
Query: 147 GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQA 206
CE ++ +++ +HAL +G EA + +M P + LM G K A
Sbjct: 530 ACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFA 589
Query: 207 NMLYEEMR 214
+ E++R
Sbjct: 590 GEITEKVR 597
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 111/221 (50%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
T++ G+ N+G +A + G PSL+ TIL R G +F++M
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G + VT+N ++ G+ + L L+ M G PD TYNILI++ ++G
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE 531
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + ++ +++ G PS F+ ++ + G+ EA ++ + D+ + P+ + L+
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
GY KA+ + +A +L+ ++ G+ PD V +N L+ G+ G
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 3/242 (1%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
M H D + G + EA VL +++ G+ +++ + +V
Sbjct: 295 MGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKV 354
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
G KL RP+ ++ + C ++ ++ + + G PD Y
Sbjct: 355 GKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCY 411
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
+I+ YC G+T A + ++K+G PS+ T + ++ A R G++ +A VF ++
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
G+ + YN LM GY K ++ + L +EMR G+SPD T+NIL+ G E
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE 531
Query: 241 WN 242
N
Sbjct: 532 AN 533
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 3/220 (1%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+L++ L V + A + + M G + + +++ R G + W+L M
Sbjct: 241 SLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY 300
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G RP V F V I C+ L S+L + FG D+ + + +I+ +C GK A
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ ++ P++ +S+ + +C G+++ A +F I ++G+ P+ Y T++DG
Sbjct: 361 IKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y +A + + G P T IL+G ++G
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFG 457
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N LM G+ + + +++ MR G+ P ++ IL ++ G ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+++R+G PS++ F +I GF ++ L M PD T + L++ YC
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ A+ N ++ G +P + ++T++H C G++ +A ++ + G+ PN + +
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 191 NTLMDGYVKAREIG---QANMLYEEM 213
+ L+ G R + A+ML EE+
Sbjct: 657 HALVLGLEGKRFVNSETHASMLLEEI 682
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V ++ + + G + A + + ++G+ P T + +G ++ F +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L+ G PS T ++I R + ES+ M G D TYN L++ Y +
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ + ++ M G P +AT++ ++H++ G + EA ++ + G P+T + +
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ G+ K + +A +L+ M + PD VT + L+ G+ K R
Sbjct: 555 IGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
AL + +++ G+ PS L + +LRV + + ML +G ++ ++ I
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
+C G LL M +G PD + + I+ C G A L + G
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
+ S+++ C+ G EA K+ I + PN +Y++ + ++ +A+ ++
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+E+ G+ PDCV + ++ G+ GR +
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 111/221 (50%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
T++ G+ N+G +A + G PSL+ TIL R G +F++M
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G + VT+N ++ G+ + L L+ M G PD TYNILI++ ++G
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE 531
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + ++ +++ G PS F+ ++ + G+ EA ++ + D+ + P+ + L+
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
GY KA+ + +A +L+ ++ G+ PD V +N L+ G+ G
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 3/242 (1%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
M H D + G + EA VL +++ G+ +++ + +V
Sbjct: 295 MGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKV 354
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
G KL RP+ ++ + C ++ ++ + + G PD Y
Sbjct: 355 GKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCY 411
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
+I+ YC G+T A + ++K+G PS+ T + ++ A R G++ +A VF ++
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
G+ + YN LM GY K ++ + L +EMR G+SPD T+NIL+ G E
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE 531
Query: 241 WN 242
N
Sbjct: 532 AN 533
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 3/220 (1%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+L++ L V + A + + M G + + +++ R G + W+L M
Sbjct: 241 SLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY 300
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G RP V F V I C+ L S+L + FG D+ + + +I+ +C GK A
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ ++ P++ +S+ + +C G+++ A +F I ++G+ P+ Y T++DG
Sbjct: 361 IKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y +A + + G P T IL+G ++G
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFG 457
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N LM G+ + + +++ MR G+ P ++ IL ++ G ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+++R+G PS++ F +I GF ++ L M PD T + L++ YC
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ A+ N ++ G +P + ++T++H C G++ +A ++ + G+ PN + +
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 191 NTLMDGYVKAREIG---QANMLYEEM 213
+ L+ G R + A+ML EE+
Sbjct: 657 HALVLGLEGKRFVNSETHASMLLEEI 682
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V ++ + + G + A + + ++G+ P T + +G ++ F +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L+ G PS T ++I R + ES+ M G D TYN L++ Y +
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ + ++ M G P +AT++ ++H++ G + EA ++ + G P+T + +
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ G+ K + +A +L+ M + PD VT + L+ G+ K R
Sbjct: 555 IGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
AL + +++ G+ PS L + +LRV + + ML +G ++ ++ I
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
+C G LL M +G PD + + I+ C G A L + G
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
+ S+++ C+ G EA K+ I + PN +Y++ + ++ +A+ ++
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+E+ G+ PDCV + ++ G+ GR +
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 113/220 (51%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ + VG I +AL+V M++ GV+ +L +++ +++ D+ + + +F+DM+++G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+P + +N +I FC + + M K P T+ +I+ Y G ++
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ +MM + GC P++ TF+ +++ L + + +A ++ D + G++ N Y +M GY
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ G+A + ++ +G+ D T+ L+ K GR
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 116/232 (50%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
++ ++ +T+M G+ V + L V R+++ G P++ L L +VG +
Sbjct: 446 DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALE 505
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ + M +G + + T+++MI GF + + ++ M K G PD YN +I+A+C
Sbjct: 506 VSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFC 565
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G A+ + M K P+ TF I+H + G++ + +VFD ++ G P
Sbjct: 566 GMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVH 625
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+N L++G V+ R++ +A + +EM GVS + T+ ++ G+ G G+
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK 677
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 103/216 (47%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
N L+ G + + +A+++L M GV + T + + VGD G ++ F +
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+G T+ ++ C+ + ++ M ++F YNILI+ + +G
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A D + M K G +P + T+++ + A + G++ A + + ++ +G+ PN Y TL
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ G+ +A +A YEEM+ G+ PD ++ L+
Sbjct: 806 IKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + N ++ F +G + A+ + M+ + RP+ + + GD ++F
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M R G P+ TFN +I G ++ + +L M G + TY ++ Y
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASV 672
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G T A ++ + G + + T+ ++ A C+ G + A V + I N+ +Y
Sbjct: 673 GDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVY 732
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N L+DG+ + ++ +A L ++M+ +GV PD T+ + K G
Sbjct: 733 NILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 89/189 (47%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
+M+G+ +VG +A + R+++ G+ + L + + G S + K+M +
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+S +N++I G+ R+ + L+ M K G PD TY I+A G + A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ M G +P++ T++T++ R +A ++ ++ MGI P+ +Y+ L+
Sbjct: 785 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Query: 198 VKAREIGQA 206
+ I +A
Sbjct: 845 LSRASIAEA 853
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 90/194 (46%)
Query: 44 RPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGES 103
+PS + ++ + R GD + F+ M +G P+S + +I + + + S
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 104 LLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALC 163
+ M + G + TY++++ + G A W + + + + + I++A C
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 164 REGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCV 223
+ N+ A + +++ GI IY+T+MDGY + + ++++ ++ G +P V
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 224 TFNILVGGHYKYGR 237
T+ L+ + K G+
Sbjct: 486 TYGCLINLYTKVGK 499
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 96/202 (47%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EAL + +M++ G+ SL +++ + G + F + R ++ + +I
Sbjct: 362 EALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
C+ + E+L+ M + G D Y+ +++ Y + + + + G
Sbjct: 422 YAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFT 481
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P++ T+ +++ + G + +A +V +++ G+ N Y+ +++G+VK ++ A +
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 210 YEEMRGKGVSPDCVTFNILVGG 231
+E+M +G+ PD + +N ++
Sbjct: 542 FEDMVKEGMKPDVILYNNIISA 563
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 86/209 (41%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G + A + RMR G+ P+ T L D + M +G S VT+
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
+V++ GF + + + +A Y +I A+C A + M +
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
G + +A + T+M + + VF R+++ G P Y L++ Y K +I +
Sbjct: 443 EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 502
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
A + M+ +GV + T+++++ G K
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 10/197 (5%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
H+ R+ G R SL R+L GD W+ K +PS F +M+ + R+
Sbjct: 273 HQERE-GSRKSLQ------RILDTNGDN---WQAVISAFEKISKPSRTEFGLMVKFYGRR 322
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ M G P + Y LI+AY + A+ + M + G E S+ T+
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
S I+ + G+ A FD + + N +IY ++ + + + +A L EM
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 216 KGVSPDCVTFNILVGGH 232
+G+ ++ ++ G+
Sbjct: 443 EGIDAPIAIYHTMMDGY 459
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFC----RQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
L ++M +G ++ M+ G+ ++GLVV + L + G P TY LI
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL----KECGFTPTVVTYGCLI 491
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
N Y GK S A++ +M + G + ++ T+S +++ + + A VF+ + G+
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
P+ +YN ++ + + +A +EM+ P TF ++ G+ K G
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 57/130 (43%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V N L+ G+ G ++EA D++ +M+ GV+P + T + GD + ++M
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
G +P+ T+ +I G+ R S M G PD Y+ L+ + +
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Query: 134 SVAMDWLNMM 143
+ A + +M
Sbjct: 851 AEAYIYSGVM 860
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N ++ G I AL +L M G P + + R + G+ + +
Sbjct: 173 DTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFW 232
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
KD L+ G P +T+ V++ CR G +L M GC PD TYN L+N C +
Sbjct: 233 KDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRR 292
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G + ++ +G E + T++T++H+LC E ++ + + P Y
Sbjct: 293 GNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITY 352
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N L++G KAR + +A + +M + PD VT+N ++G K G
Sbjct: 353 NILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEG 398
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A++VL M G P + L R G+ V + + +L G ++VT+N ++
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
C + E +L++M + P TYNILIN C S A+D+ M++ C P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
+ T++T++ A+ +EG V +A ++ +++ P YN+++DG K + +A LY
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELY 442
Query: 211 EEMRGKGVSPDCVTFNILVGG 231
+M G+ PD +T L+ G
Sbjct: 443 HQMLDAGIFPDDITRRSLIYG 463
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E+D N ++ + G + +A ++ M P + + L R L R+
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ + M+ G P ++T+N++I C++ + LL M G PD TYN +I
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G A+ + ++NGC P M T++ ++ +CR A +V + + G P+
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
YN+L++ + + + + + + G+ + VT+N L+
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 103/221 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+L+ G + E V+ + G+ + L L + V ++
Sbjct: 278 DIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL 337
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M + P+ +T+N++I G C+ + L + M + C PD TYN ++ A +
Sbjct: 338 NIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKE 397
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G A++ L ++ C P + T+++++ L ++G + +A +++ ++ D GI P+
Sbjct: 398 GMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITR 457
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+L+ G+ +A + +A + +E +G T+ +++ G
Sbjct: 458 RSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQG 498
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 2/226 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ + E ++L+ M P++ IL L + F ML
Sbjct: 318 NTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLE 377
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGE-SLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
+ P VT+N ++ G ++G+V LL L+ C P TYN +I+ KG
Sbjct: 378 QKCLPDIVTYNTVL-GAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMK 436
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A++ + M+ G P T ++++ CR V EA +V + G + Y ++
Sbjct: 437 KALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVI 496
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
G K +EI A + E M G PD + +V G + G E
Sbjct: 497 QGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSE 542
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
G KL + M R P + + ++ G R L +L +M G PD TY
Sbjct: 118 GKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITY 177
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF-DRIQ 179
N++I C KG A+ L M +G P + T++T++ + GN +A + + D++Q
Sbjct: 178 NMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQ 237
Query: 180 DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ G P Y L++ + +A + E+M +G PD VT+N LV + + G
Sbjct: 238 N-GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRG 293
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NT++ GM+ +A+++L +++ P L + L + G +L+
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELY 442
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
ML G P +T +I GFCR + +L G TY ++I C K
Sbjct: 443 HQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKK 502
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
+ +A++ + +M+ GC+P ++ I+ +
Sbjct: 503 KEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 116 DAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF 175
D T N +++ C GK + A + +M ++ P + S ++ L R + +A +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 176 DRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
+ G P+T YN ++ K I A +L E+M G PD +T+N ++ + Y
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 236 G 236
G
Sbjct: 223 G 223
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N +++ + M+ +A V M + G+ P++ + + GD V K++ +M R
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+ S VT+N++I GF + + M + G +++N LI YC +G
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + M+ G P+ +T++ + ALC G + +AR++ + AP+ YNTLM
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMH 382
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
GY+K + +A++L++++R + P VT+N L+ G
Sbjct: 383 GYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG 418
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 6/238 (2%)
Query: 1 MWQNHNEYESDFS--VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLL 58
+W +FS N L+ GF G + EA MR G + + L
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 319
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
+ G + W + +ML G P++ T+N+ IC C + LL M PD
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVV 375
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
+YN L++ Y GK A + + PS+ T++T++ LC GN+ A+++ + +
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
I P+ Y TL+ G+VK + A +Y+EM KG+ PD + G + G
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLG 493
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 1/221 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D TL++GF+ G + A +V M G++P A T LR+GD ++L
Sbjct: 443 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH 502
Query: 71 KDMLRKGPR-PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
++M+ P +NV I G C+ LV + + G PD TY +I Y
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 562
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G+ +A + + M++ PS+ T+ +++ + G + +A + ++ G+ PN
Sbjct: 563 NGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
+N L+ G KA I +A +M +G+ P+ ++ +L+
Sbjct: 623 HNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 105/266 (39%), Gaps = 36/266 (13%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTLM G++ +G EA + +R + PS+ L L G+ +L
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY---------- 120
++M + P +T+ ++ GF + L + + M + G PD + Y
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 121 --------------------------NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMAT 154
N+ I+ C G A+++ + + G P T
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
++T++ G AR ++D + + P+ Y L+ G+ KA + QA EM+
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
Query: 215 GKGVSPDCVTFNILVGGHYKYGRNGE 240
+GV P+ +T N L+ G K G E
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDE 638
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 5/223 (2%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
N L+ G+ G+ +A V M + G+ P+ S I L G +L M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM- 369
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
P V++N ++ G+ + V L + P TYN LI+ C G
Sbjct: 370 ---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A M P + T++T++ + GN+ A +V+D + GI P+ Y T
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 195 DGYVKAREIGQANMLYEEMRGKG-VSPDCVTFNILVGGHYKYG 236
G ++ + +A L+EEM +PD +N+ + G K G
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
+ + D ++ N + G VG + +A++ ++ VG+ P T + R L G +
Sbjct: 509 DHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKM 568
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
L+ +MLRK PS +T+ V+I G + L M K G P+ T+N L+
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
C G A +L M + G P+ +++ ++ C E K++ + D I P
Sbjct: 629 GMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Query: 186 NTTIYNTLMDGYVKAREIGQANML 209
+ + L K E + L
Sbjct: 689 DGYTHRALFKHLEKDHESREVEFL 712
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
F+ M+RKG PS N+++ + + ++ M + G P T+N ++++ C
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDS-CF 249
Query: 130 KGKTSVAMD--WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
K +D WL M +N E S T++ +++ + G + EAR+ ++ G A
Sbjct: 250 KAGDLERVDKIWLEMKRRN-IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP 308
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+N L++GY K A + +EM G+ P T+NI + +GR
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 132 KTSVAMDWL---NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
K S+A +L M++ G PS+ + ++ L + +A V++ + + GI P
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+NT++D KA ++ + + ++ EM+ + + VT+NIL+ G K G+ E
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEE 291
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ G+ V + EA + + M D G++P + A ++ LLR KLF M KG
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P P+ ++ +MI FC+Q + M G PDA Y LI + + K
Sbjct: 363 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 422
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ L M + G P T++ ++ + + ++++++ I P+ +N +M Y
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 482
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
AR +++EM KG+ PD ++ +L+ G G++ E
Sbjct: 483 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 525
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N ++ G L +A+ + H M+ G P++ + TI+ R + + + F
Sbjct: 331 DIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF 390
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
DM+ G +P + + +I GF Q+ L LL M + G PD TYN LI +
Sbjct: 391 DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 450
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
N M++N EPS+ TF+ IM + N R V+D + GI P+ Y
Sbjct: 451 KMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSY 510
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
L+ G + + +A EEM KG+ + +N ++ G+
Sbjct: 511 TVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 19 MRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGP 78
M+ F +A+ + M+ + + I L L R G ++ D L++
Sbjct: 235 MKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKLKERF 293
Query: 79 RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD 138
P+ +T+ V++ G+CR + L+ + + M G PD +N+++ K S A+
Sbjct: 294 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 353
Query: 139 WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYV 198
++M G P++ +++ ++ C++ ++ A + FD + D G+ P+ +Y L+ G+
Sbjct: 354 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 413
Query: 199 KAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+++ L +EM+ KG PD T+N L+
Sbjct: 414 TQKKLDTVYELLKEMQEKGHPPDGKTYNALI 444
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 1/196 (0%)
Query: 45 PSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESL 104
P++ T+L RV + +++ DM+ G +P V NVM+ G R L
Sbjct: 295 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 354
Query: 105 LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR 164
H+M G P+ +Y I+I +C + A+++ + M+ +G +P A ++ ++
Sbjct: 355 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 414
Query: 165 EGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVT 224
+ + ++ +Q+ G P+ YN L+ + +Y +M + P T
Sbjct: 415 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 474
Query: 225 FNILVGGHYKYGRNGE 240
FN+++ ++ RN E
Sbjct: 475 FNMIMKSYF-VARNYE 489
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ G+ V + EA + + M D G++P + A ++ LLR KLF M KG
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 363
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P P+ ++ +MI FC+Q + M G PDA Y LI + + K
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ L M + G P T++ ++ + + ++++++ I P+ +N +M Y
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
AR +++EM KG+ PD ++ +L+ G G++ E
Sbjct: 484 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 526
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N ++ G L +A+ + H M+ G P++ + TI+ R + + + F
Sbjct: 332 DIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF 391
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
DM+ G +P + + +I GF Q+ L LL M + G PD TYN LI +
Sbjct: 392 DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
N M++N EPS+ TF+ IM + N R V+D + GI P+ Y
Sbjct: 452 KMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSY 511
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
L+ G + + +A EEM KG+ + +N ++ G+
Sbjct: 512 TVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 19 MRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGP 78
M+ F +A+ + M+ + + I L L R G ++ D L++
Sbjct: 236 MKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKLKERF 294
Query: 79 RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD 138
P+ +T+ V++ G+CR + L+ + + M G PD +N+++ K S A+
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 354
Query: 139 WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYV 198
++M G P++ +++ ++ C++ ++ A + FD + D G+ P+ +Y L+ G+
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 199 KAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+++ L +EM+ KG PD T+N L+
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 1/196 (0%)
Query: 45 PSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESL 104
P++ T+L RV + +++ DM+ G +P V NVM+ G R L
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 355
Query: 105 LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR 164
H+M G P+ +Y I+I +C + A+++ + M+ +G +P A ++ ++
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 165 EGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVT 224
+ + ++ +Q+ G P+ YN L+ + +Y +M + P T
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 475
Query: 225 FNILVGGHYKYGRNGE 240
FN+++ ++ RN E
Sbjct: 476 FNMIMKSYF-VARNYE 490
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 108/233 (46%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D N ++ G+ + +AL+VL M + G+ P+L+ + + R G W
Sbjct: 191 FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ F +M ++ VT+ ++ GF + ++ M + G P TYN +I
Sbjct: 251 EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVL 310
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C K A+ M++ G EP++ T++ ++ L G ++ R+++ G PN
Sbjct: 311 CKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF 370
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
YN ++ Y + E+ +A L+E+M P+ T+NIL+ G + R+ +
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 105/215 (48%), Gaps = 1/215 (0%)
Query: 22 FLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPS 81
+ + G +A+ + M + G L++ + +L + ++LF+ LR
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR-ALRGRFSVD 194
Query: 82 SVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLN 141
+VT+NV++ G+C + +L M + G +P+ TYN ++ + G+ A ++
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFL 254
Query: 142 MMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAR 201
M K CE + T++T++H G + AR VFD + G+ P+ YN ++ K
Sbjct: 255 EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 314
Query: 202 EIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ A +++EEM +G P+ T+N+L+ G + G
Sbjct: 315 NVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D T++ GF G I A +V M GV PS++ + ++L + + +
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+F++M+R+G P+ T+NV+I G GE L+ M GC+P+ TYN++I Y
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ A+ M C P++ T++ ++ + V R +DM +A N
Sbjct: 382 ECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF----------VRKRSEDMVVAGNQA 431
Query: 189 IYNTLM 194
++
Sbjct: 432 FAKEIL 437
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 103 SLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
SL+H M P T+ I+ Y GK A+ M ++GC +A+F+TI+ L
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 163 CREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDC 222
C+ V +A ++F ++ + +T YN +++G+ + +A + +EM +G++P+
Sbjct: 172 CKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 223 VTFNILVGGHYKYGR 237
T+N ++ G ++ G+
Sbjct: 231 TTYNTMLKGFFRAGQ 245
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
+ R + + EA+ H+M + G + S + L + + G K+F M +K
Sbjct: 168 ISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKR 227
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P ++ +++ G+ ++ L+ + + M G +PD Y I+INA+C K A+
Sbjct: 228 FEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAI 287
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ N M + C+PS F ++++ L E + +A + F+R + G YN L+ Y
Sbjct: 288 RFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAY 347
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++ + A +EMR KGV P+ T++I++ + R+ E
Sbjct: 348 CWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 390
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 3/224 (1%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E D L+ G+ + +V M+D G P + A I+ + Y
Sbjct: 228 FEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAI 287
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ F +M ++ +PS F +I G ++ L G +A TYN L+ AY
Sbjct: 288 RFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAY 347
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C + A ++ M G P+ T+ I+H L R EA +V+ Q M P
Sbjct: 348 CWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVY---QTMSCEPTV 404
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ Y ++ + + A +++EM+GKGV P F+ L+
Sbjct: 405 STYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA 448
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGV---RPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+L+ G + + +AL+ R + G P+ +A+ + R+ D +K +M
Sbjct: 307 SLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMED---AYKTVDEM 363
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
KG P++ T+++++ R Q + M C+P TY I++ +C K +
Sbjct: 364 RLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERL 420
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+A+ + M G P M FS+++ ALC E + EA + F+ + D+GI P +++ L
Sbjct: 421 DMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 95/220 (43%), Gaps = 4/220 (1%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
+++ +++ N G++ AL V + G + + S L L ++ + +W L
Sbjct: 95 ALIEEVLKKLSNAGVL--ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVD 152
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
DM K S TF ++ + R + + H M +FG ++ +N +++
Sbjct: 153 DMKAK-KLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSR 211
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
A + M K EP + +++ ++ +E N++ +V ++D G P+ Y
Sbjct: 212 NVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYG 271
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+++ + KA++ +A + EM + P F L+ G
Sbjct: 272 IIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLING 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 61/122 (50%)
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
T+ ++ Y K A+ + M + G + + F+ ++ L + NV +A+KVFD++
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
+ P+ Y L++G+ + + + + + EM+ +G PD V + I++ H K +
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 239 GE 240
E
Sbjct: 284 EE 285
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A + MR GV P+ I+ L+R+ +++++ M P+ T+ +M+
Sbjct: 355 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMV 411
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
FC ++ L + + M G P ++ LI A C + K A ++ N M+ G
Sbjct: 412 RMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIR 471
Query: 150 PSMATFSTIMHALCREG 166
P FS + L EG
Sbjct: 472 PPGHMFSRLKQTLLDEG 488
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 39/261 (14%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS---------- 65
NTL++G +V + +AL + + M G+RP+ I+ L + G G+
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 66 -----------------------------VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQ 96
+++K+M +K SV +NV+I G C
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314
Query: 97 GLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFS 156
+V + M K G +PD FTYN LI+A C +GK A D M G P ++
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYK 374
Query: 157 TIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
I+ LC G+V A + + + P ++N ++DGY + + A + M
Sbjct: 375 VIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSY 434
Query: 217 GVSPDCVTFNILVGGHYKYGR 237
GV P+ T N L+ G+ K GR
Sbjct: 435 GVKPNVYTNNALIHGYVKGGR 455
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 106/228 (46%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
+D V N ++RG + G + A + M GV P + L L + G + L
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
M G P +++ V+I G C + L M K P+ +N++I+ Y
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G TS A+ LN+M+ G +P++ T + ++H + G +I+A V + ++ I P+TT
Sbjct: 418 YGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT 477
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YN L+ + A LY+EM +G PD +T+ LV G GR
Sbjct: 478 YNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGR 525
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
+Y+ S+ +++MR G + AL + +M GV P L L L + G
Sbjct: 116 DYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKA 175
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
L ++M GP P+ V++N +I G C + L + M K+G P+ T NI+++A
Sbjct: 176 DGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHA 235
Query: 127 YCIKG-----KTSVAMDWLNMMMKNGCEPSMATFSTIMHALC-REGNVIEARKVFDRIQD 180
C KG + + L+ N P TI+ C + GNV++A +V+ +
Sbjct: 236 LCQKGVIGNNNKKLLEEILDSSQANA--PLDIVICTILMDSCFKNGNVVQALEVWKEMSQ 293
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ ++ +YN ++ G + + A +M +GV+PD T+N L+ K G+ E
Sbjct: 294 KNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
R GD S + ML G +P+ T N +I G+ + L+ + + M PD
Sbjct: 417 RYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTT 476
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
TYN+L+ A C G +A + M++ GC+P + T++ ++ LC +G + +A + RI
Sbjct: 477 TYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE---MRGKGVS 219
Q GI + + L Y + + G+A ++Y++ R +GVS
Sbjct: 537 QATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGVS 580
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 2/231 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL+ G EA D+ M++ GV P + ++ + L GD +
Sbjct: 334 DVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFL 393
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
ML+ P + +NV+I G+ R S+L+LM +G P+ +T N LI+ Y +K
Sbjct: 394 LSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY-VK 452
Query: 131 GKTSVAMDWL-NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G + W+ N M P T++ ++ A C G++ A +++D + G P+
Sbjct: 453 GGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIIT 512
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y L+ G + +A L ++ G++ D V F IL + + R GE
Sbjct: 513 YTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGE 563
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 6/234 (2%)
Query: 2 WQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVG 61
+ + E+ F+VL+ +++ L+ + + + + + LS + + R L G
Sbjct: 78 YDQKEDPEAIFNVLDYILKSSLD--RLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQG 135
Query: 62 DYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYN 121
+ L K M+ G P +T N ++ G C+ + + L+ M + G P+ +YN
Sbjct: 136 KLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYN 195
Query: 122 ILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNV-IEARKVFDRIQD 180
LI C A+ N M K G P+ T + I+HALC++G + +K+ + I D
Sbjct: 196 TLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILD 255
Query: 181 --MGIAP-NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
AP + I LMD K + QA +++EM K V D V +N+++ G
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRG 309
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 9/233 (3%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL-FKD 72
V N +M + G +A +++ MR G P L + L L+ G + D
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 73 MLR-KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
M+R G RP ++T+N ++ R L + M C PD +TYN +I+ Y G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVY---G 343
Query: 132 KTSVAMDWLNMMMK---NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ +A + + M+ G P T++++++A RE N + ++V+ ++Q MG +
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRG-KGVSPDCVTFNILVGGHYKYGRNGE 240
YNT++ Y K ++ A LY++M+G G +PD +T+ +L+ K R E
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL+ + A+ V M +P L + + R G +LF
Sbjct: 296 DAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++ KG P +VT+N ++ F R++ + + M K G D TYN +I+ Y +
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQ 415
Query: 131 GKTSVAMD-WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G+ +A+ + +M +G P T++ ++ +L + +EA + + D+GI P
Sbjct: 416 GQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQT 475
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
Y+ L+ GY KA + +A + M G PD + +++++
Sbjct: 476 YSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
++ + ++ N++++ + + + + V R+++ G+ P + L + R +
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L + M G P T+ +I F +Q+ L E L + G D Y+ ++
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
G S A L MM G EP++AT +M + GN EA KV ++D + T
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTT 1102
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
Y++++D Y+++++ EM+ +G+ PD
Sbjct: 1103 LPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 1/233 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D N ++ + G+ EA + + G P L R + V +
Sbjct: 329 QPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE 388
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF-GCDPDAFTYNILINAY 127
+++ M + G +T+N +I + +Q L + L M G +PDA TY +LI++
Sbjct: 389 VYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+T A ++ M+ G +P++ T+S ++ + G EA F + G P+
Sbjct: 449 GKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDN 508
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y+ ++D ++ E +A LY +M G +P + +++ G K R+ +
Sbjct: 509 LAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDD 561
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 95/207 (45%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
+N L+ G + E V+ ++D+G + S S+I ++ R G+ V K++ M
Sbjct: 825 INILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMK 884
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
G P+ + +MI C+ + + E ++ M + + +N ++ Y
Sbjct: 885 AAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYK 944
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
+ + + G EP T++T++ CR+ E + +++++G+ P Y +L+
Sbjct: 945 KTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLI 1004
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPD 221
+ K + + QA L+EE+ KG+ D
Sbjct: 1005 SAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPR-PSSVTFNVM 88
EA V +R G S S + + ++G + ++ KG S + +
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDI 758
Query: 89 ICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC 148
I + +Q+ ES++ + + G PD T+N L++AY G A N MM++G
Sbjct: 759 IEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGP 818
Query: 149 EPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANM 208
P++ + + ++HALC +G + E V + +QDMG + + ++D + +A I +
Sbjct: 819 SPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKK 878
Query: 209 LYEEMRGKGVSPDCVTFNILV 229
+Y M+ G P + +++
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMI 899
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/200 (19%), Positives = 83/200 (41%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A V+ +R G P L L + G Y +F M+R GP P+ + N+++
Sbjct: 770 KAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILL 829
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
C L ++ + G + ++++A+ G + M G
Sbjct: 830 HALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL 889
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P++ + ++ LC+ V +A + +++ I+N+++ Y + + +
Sbjct: 890 PTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQV 949
Query: 210 YEEMRGKGVSPDCVTFNILV 229
Y+ ++ G+ PD T+N L+
Sbjct: 950 YQRIKETGLEPDETTYNTLI 969
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 2/177 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLLRVGDYGSVWKL 69
D NT++ + G + AL + M+ + G P T+L L + L
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
+ML G +P+ T++ +ICG+ + E M + G PD Y+++++
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM-GIAP 185
+T A M+ +G PS + ++ L +E + +K ++++ G+ P
Sbjct: 521 GNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 107/225 (47%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+T + F G + AL H M+ + P++ T L + GD L+K+M R
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+ VT+ +I GFC++ + E + M + +P++ Y +I+ + +G +
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
AM +L M+ G + + I+ LC G + EA ++ + ++ + P+ I+ T+M+
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y K+ + A +Y ++ +G PD V + ++ G K G+ E
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 105/248 (42%), Gaps = 37/248 (14%)
Query: 27 MIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFN 86
M+ EAL L R+R P L+ K ++ +G P +FN
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 87 VMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG---KTSVAMDWLNM- 142
++ C+ + E ++H MP+FGC+PD +YN LI+ +C G S+ ++ L
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 143 ---------------------------------MMKNGCEPSMATFSTIMHALCREGNVI 169
+M C P++ T+ST + C+ G +
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 170 EARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
A K F ++ ++PN + L+DGY KA ++ A LY+EMR +S + VT+ L+
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 230 GGHYKYGR 237
G K G
Sbjct: 241 DGFCKKGE 248
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 6/233 (2%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y S N+++ +G + A D++H M G P + + L R GD S
Sbjct: 52 YTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA- 110
Query: 68 KLFKDMLRKGP----RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
L + LR +P V+FN + GF + + L + +M K C P+ TY+
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTW 169
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
I+ +C G+ +A+ + M ++ P++ TF+ ++ C+ G++ A ++ ++ + +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ N Y L+DG+ K E+ +A +Y M V P+ + + ++ G ++ G
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRG 282
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 100/208 (48%), Gaps = 5/208 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + T+M + G + A+++ H++ + G P + A++ + + + G F
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ + V + V+I C++ + E L + + G PD F Y I C +
Sbjct: 397 CI-----EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G A M++ G + ++T+++ L +G ++EAR+VFD + + GI+P++ ++
Sbjct: 452 GNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ L+ Y K + A+ L +M+ +G+
Sbjct: 512 DLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 103/226 (45%), Gaps = 5/226 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + ++ G G + EA +++ M + P + T + + G + ++
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++ +G P V + MI G + L E++++ + D Y +LI+A C +
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQL--HEAIVYFCIEKAND---VMYTVLIDALCKE 416
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G + + + G P +++ + LC++GN+++A K+ R+ G+ + Y
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAY 476
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
TL+ G + +A +++EM G+SPD F++L+ + K G
Sbjct: 477 TTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 104/226 (46%), Gaps = 4/226 (1%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVG---VRPSLSAITILFRLLLRVGDYGS 65
E D N+L+ G G I A VL +R +P + + LF ++
Sbjct: 88 EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDE 147
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
V+ ++ ++ K P+ VT++ I FC+ L + H M + P+ T+ LI+
Sbjct: 148 VF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLID 206
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
YC G VA+ M + ++ T++ ++ C++G + A +++ R+ + + P
Sbjct: 207 GYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP 266
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
N+ +Y T++DG+ + + A +M +G+ D + +++ G
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 39/261 (14%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLR----------- 59
D ++ T++RGF +I + V+ + G++PSL + +L++
Sbjct: 111 DDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFT 170
Query: 60 -----VGDYGSVW-------------------KLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
G +G V+ KL + M G P++V +N ++ C+
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ SL+ M +P+ T+NILI+AYC + K +M L G P + T
Sbjct: 231 GKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTV 286
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
+ +M LC EG V EA +V +R++ G + NTL+ GY ++ A + EM
Sbjct: 287 TKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMER 346
Query: 216 KGVSPDCVTFNILVGGHYKYG 236
KG P+ T+N+L+ G+ G
Sbjct: 347 KGYLPNVETYNLLIAGYCDVG 367
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 4/230 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D LM+G I + +L M+ GV P+ L L + G G L
Sbjct: 181 DVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLM 240
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M P+ VTFN++I +C +Q L+ LL G PD T ++ C +
Sbjct: 241 SEM----KEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNE 296
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ S A++ L + G + + +T++ C G + A++ F ++ G PN Y
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
N L+ GY + A + +M+ + + TFN L+ G GR +
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDD 406
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 9/226 (3%)
Query: 20 RGFLNVGMIFEALDVLHRMRD-----VGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
R + +F D ++++ D +G+ P + + R R V + +
Sbjct: 80 RALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVS 139
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
+ G +PS FN ++ ++ + E M G D +TY IL+ + +
Sbjct: 140 KFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIG 199
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
L +M +G P+ ++T++HALC+ G V AR + +++ PN +N L+
Sbjct: 200 DGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILI 255
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y +++ Q+ +L E+ G PD VT ++ GR E
Sbjct: 256 SAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSE 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 2/193 (1%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E + N L+ + N + +++ +L + +G P + +T + +L G +
Sbjct: 245 EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALE 304
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ + + KG + V N ++ G+C + V + M + G P+ TYN+LI YC
Sbjct: 305 VLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC 364
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G A+D N M + + ATF+T++ L G + K+ + +QD
Sbjct: 365 DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGAR 424
Query: 189 I--YNTLMDGYVK 199
I YN ++ G+ K
Sbjct: 425 IDPYNCVIYGFYK 437
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 101/249 (40%), Gaps = 35/249 (14%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLL---------- 57
Y + N L+ G+ +VGM+ ALD + M+ +R + + L R L
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGL 408
Query: 58 --------------LRVGDYGSV---------WKLFKDMLRKGPR--PSSVTFNVMICGF 92
R+ Y V W+ + L K + P +V + +
Sbjct: 409 KILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISL 468
Query: 93 CRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSM 152
C + G+ ++ M G P + LI+ Y GK +++ +N M+ G P
Sbjct: 469 CEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRS 528
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
+TF+ ++ C++ V+ K + + + G P+T YN L++ +I +A +L+
Sbjct: 529 STFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSR 588
Query: 213 MRGKGVSPD 221
M K + PD
Sbjct: 589 MVEKSIVPD 597
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 47 LSAITILFRLLLRVGDYGSV---WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGES 103
+ +I + L+ R +G + +L DM+ +G P S TFN +I GFC+Q ++ G
Sbjct: 490 VPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIK 549
Query: 104 LLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALC 163
+ M + GC PD +YN L+ C+KG A + M++ P + +S++M L
Sbjct: 550 FVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLS 609
Query: 164 REGNVIEARKVFDRIQ 179
++ + + D IQ
Sbjct: 610 QKTAIHVNSSLQDIIQ 625
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 88/181 (48%), Gaps = 6/181 (3%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRL--LLRVGDYGSVWKLFKDM 73
N ++ GF +AL+ L +M + R A+ F+L L G + + M
Sbjct: 429 NCVIYGFYKENRWEDALEFLLKMEKLFPR----AVDRSFKLISLCEKGGMDDLKTAYDQM 484
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ +G PS + + +I + + + L++ M G P + T+N +I +C + K
Sbjct: 485 IGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKV 544
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ ++ M + GC P +++ ++ LC +G++ +A +F R+ + I P+ +++++L
Sbjct: 545 MNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSL 604
Query: 194 M 194
M
Sbjct: 605 M 605
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 28/247 (11%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
TL+ G+ G + +ALD++ M G+ P L +L L R G V ++++ M
Sbjct: 427 TTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKA 486
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGE----SLLHLMPK-----------FGCDPDAF-- 118
+GP+P++VT +V+I G C + + E SL P+ G A+
Sbjct: 487 EGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKA 546
Query: 119 -----------TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGN 167
Y L + CI+G A D L M EP + ++ A C+ N
Sbjct: 547 FVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNN 606
Query: 168 VIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
V EA+ +FD + + G+ P+ Y ++ Y + E+ +A L+E+M+ +G+ PD VT+ +
Sbjct: 607 VREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV 666
Query: 228 LVGGHYK 234
L+ + K
Sbjct: 667 LLDRYLK 673
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 18/230 (7%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G + +A DVL +M V P S + ++ + LF M+ +G P T+
Sbjct: 570 GYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTY 629
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY-----------CIKGKTS 134
+MI +CR L ESL M + G PD TY +L++ Y ++G+
Sbjct: 630 TIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVG 689
Query: 135 V--AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
A + L G + ++ ++ C+ N+ +A ++FDR+ D G+ P+ Y T
Sbjct: 690 KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTT 749
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPD-----CVTFNILVGGHYKYGR 237
L+ Y + I A L E+ K P V L ++YG
Sbjct: 750 LISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKRFQYGE 799
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 88/187 (47%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EAL L +M G++ + ++++ + ++ + FK+ V +NV
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAF 395
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
+ + LL M G PD Y LI+ YC++GK A+D ++ M+ NG
Sbjct: 396 DALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMS 455
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P + T++ ++ L R G+ E ++++R++ G PN + +++G AR++ +A
Sbjct: 456 PDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDF 515
Query: 210 YEEMRGK 216
+ + K
Sbjct: 516 FSSLEQK 522
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 16/233 (6%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+ ++G+ G+ +A R+ + +R S+ I + F L + G + K M
Sbjct: 529 SFVKGYCEAGLSKKAYKAFVRL-EYPLRKSVY-IKLFFSLCIE-GYLEKAHDVLKKMSAY 585
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
P MI FC+ + + L M + G PD FTY I+I+ YC + A
Sbjct: 586 RVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKA 645
Query: 137 MDWLNMMMKNGCEPSMATFSTIM----------HALCREGNVIEARKVFDRIQDM---GI 183
M + G +P + T++ ++ H C + RK + +++ GI
Sbjct: 646 ESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGI 705
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ Y L+D K + QA L++ M G+ PD V + L+ +++ G
Sbjct: 706 GLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKG 758
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 95/219 (43%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
+VL ++RGF N + A V+ M ++G + A + + +
Sbjct: 284 AVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDK 343
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
ML KG + + V ++++ +C+ + D YN+ +A G+
Sbjct: 344 MLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGR 403
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
A + L M G P + ++T++ C +G V++A + D + G++P+ YN
Sbjct: 404 VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
L+ G + + +YE M+ +G P+ VT ++++ G
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEG 502
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+++ +++ + + M EAL+ RD+ + + F L ++G ++L ++M
Sbjct: 355 IVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM 414
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+G P + + +I G+C Q +V L+ M G PD TYN+L++ G
Sbjct: 415 KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHE 474
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ 179
++ M G +P+ T S I+ LC V EA F ++
Sbjct: 475 EEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE 520
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
GFC + + ES++ M + G D + +I+ YC A+ +L+ M+ G +
Sbjct: 292 GFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKV 351
Query: 151 SMATFSTIMH-----------------------------------ALCREGNVIEARKVF 175
+ S I+ AL + G V EA ++
Sbjct: 352 NCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELL 411
Query: 176 DRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
++D GI P+ Y TL+DGY ++ A L +EM G G+SPD +T+N+LV G +
Sbjct: 412 QEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARN 471
Query: 236 GRNGE 240
G E
Sbjct: 472 GHEEE 476
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V L++ ++++GM EA DVL + + + + A L + G G + LFK +
Sbjct: 148 VSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQL 207
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ G + T+ +++ CR+ L E+ + L+ + F Y IN C+ G+T
Sbjct: 208 KQLGLCANEYTYAIVVKALCRKGNL--EEAAMLLIE----NESVFGYKTFINGLCVTGET 261
Query: 134 SVAMDWLNMMMKN---GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
A+ + ++ + A ++ C E + A V ++++G +
Sbjct: 262 EKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYAC 321
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
++D Y K + +A ++M GKG+ +CV ++++ + K
Sbjct: 322 LAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK 365
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 13/202 (6%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
S+ ++ F + + EA + M + G+ P L TI+ R+ + LF+D
Sbjct: 592 SMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFED 651
Query: 73 MLRKGPRPSSVTFNVMICGF----------CRQQGLVVGESLLHLMPKF---GCDPDAFT 119
M ++G +P VT+ V++ + C QG V ++ +F G D
Sbjct: 652 MKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVC 711
Query: 120 YNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ 179
Y +LI+ C A + + M+ +G EP M ++T++ + R+G + A + +
Sbjct: 712 YTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELS 771
Query: 180 DMGIAPNTTIYNTLMDGYVKAR 201
P+ + + +KA+
Sbjct: 772 KKYNIPSESFEAAVKSAALKAK 793
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D N L+ + + M+ A V+ M G++ + L + RV +
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 69 -LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ K+M +G V+++ +I FCR L M + G + TY LI A+
Sbjct: 312 FMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+G +SVA L+ M + G P ++TI+ LC+ GNV +A VF+ + + I P+
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
YN+L+ G ++ + +A L+E+M+GK PD +TF ++GG
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGG 474
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 12/233 (5%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V N L+ GF G I +A + M +G P L +L + +M
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
Query: 74 LRKGPRPSSVTFNVMICGFCRQQ------GLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+R G + + ++N ++ CR +V E + P+ CD +Y+ LI +
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKE----MEPRGFCD--VVSYSTLIETF 335
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C T A M + G ++ T+++++ A REGN A+K+ D++ ++G++P+
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y T++D K+ + +A ++ +M ++PD +++N L+ G + GR E
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTE 448
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 36/264 (13%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D L+ G G + +A+++ + M GV P A L L ++
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 69 LFKDMLRKGP-RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ + ++ + S+V +N +I GFC+ + E+L M K GC+PD TYN+L+N Y
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Query: 128 CIKG-------------KTSVAMDW--LNMMMKNGC----------------EP----SM 152
++ + +D N ++K C EP +
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDV 325
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
++ST++ CR N +A ++F+ ++ G+ N Y +L+ +++ A L ++
Sbjct: 326 VSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQ 385
Query: 213 MRGKGVSPDCVTFNILVGGHYKYG 236
M G+SPD + + ++ K G
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSG 409
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 85/171 (49%)
Query: 51 TILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK 110
+ L R + ++LF++M +KG + VT+ +I F R+ V + LL M +
Sbjct: 329 STLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTE 388
Query: 111 FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIE 170
G PD Y +++ C G A N M+++ P ++++++ LCR G V E
Sbjct: 389 LGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTE 448
Query: 171 ARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
A K+F+ ++ P+ + ++ G ++ +++ A ++++M KG + D
Sbjct: 449 AIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 1/213 (0%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
GMI A+ V MR R +L+R + ++ DM G T+
Sbjct: 23 GMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTY 82
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
+ I G C+ + + ++LL M G PD + +N+ ++ C + K A+ M++
Sbjct: 83 SRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQ 142
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
G EP + +++ +++ L R G V +A ++++ + G++P+ L+ G AR++
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL 202
Query: 206 A-NMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
A M+ EE++ V V +N L+ G K GR
Sbjct: 203 AYEMVAEEIKSARVKLSTVVYNALISGFCKAGR 235
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D +TL+ F +A + MR G+ ++ T L + LR G+ KL
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M G P + + ++ C+ + + + M + PDA +YN LI+ C
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ + A+ M C P TF I+ L R + A KV+D++ D G + +
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 191 NTLMDG 196
+TL+
Sbjct: 504 DTLIKA 509
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+L++ FL G A +L +M ++G+ P T + L + G+ + +F DM+
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P ++++N +I G CR + L M C PD T+ +I K S
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSA 483
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALC 163
A + MM G T++ A C
Sbjct: 484 AYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 2/244 (0%)
Query: 1 MWQNHN-EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVR-PSLSAITILFRLLL 58
M N N Y D V + ++ GF +G AL D GV P+L T L L
Sbjct: 159 MMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALC 218
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
++G V L + + +G V ++ I G+ + LV M + G + D
Sbjct: 219 QLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVV 278
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
+Y+ILI+ +G A+ L M+K G EP++ T++ I+ LC+ G + EA +F+RI
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRI 338
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
+GI + +Y TL+DG + + +A + +M +G+ P +T+N ++ G GR
Sbjct: 339 LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRV 398
Query: 239 GEWN 242
E +
Sbjct: 399 SEAD 402
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E D + + G+ G + +AL M + G+ + + +IL L + G+
Sbjct: 238 FEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEAL 297
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M+++G P+ +T+ +I G C+ L L + + G + D F Y LI+
Sbjct: 298 GLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGI 357
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C KG + A L M + G +PS+ T++T+++ LC G V EA +V G+ +
Sbjct: 358 CRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDV 412
Query: 188 TIYNTLMDGYVKAREI-----------------------------------GQANMLYEE 212
Y+TL+D Y+K + I G+A+ LY
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 213 MRGKGVSPDCVTFNILVGGHYKYGRNGE 240
M ++PD T+ ++ G+ K G+ E
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEE 500
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 2/155 (1%)
Query: 83 VTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNM 142
+ + ++I G C++ LV +L G + TYN LIN C +G A+ +
Sbjct: 656 IDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDS 715
Query: 143 MMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKARE 202
+ G PS T+ ++ LC+EG ++A K+ D + G+ PN IYN+++DGY K +
Sbjct: 716 LENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQ 775
Query: 203 IGQA-NMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
A ++ +M G+ V+PD T + ++ G+ K G
Sbjct: 776 TEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKG 809
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 41/261 (15%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ G G + EAL +L +M GV P+L T + R L ++G + LF
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF 335
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+L G + +I G CR+ L S+L M + G P TYN +IN C+
Sbjct: 336 NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVI--------------------- 169
G+ S A + + G + T+ST++ + + N+
Sbjct: 396 GRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC 450
Query: 170 --------------EARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
EA ++ + +M + P+T Y T++ GY K +I +A ++ E+R
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Query: 216 KGVSPDCVTFNILVGGHYKYG 236
VS V +N ++ K G
Sbjct: 511 SSVSA-AVCYNRIIDALCKKG 530
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%)
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G +++T+N +I G C+Q LV L + G P TY ILI+ C +G
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A L+ M+ G P++ +++I+ C+ G +A +V R + P+ ++++
Sbjct: 744 AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIK 803
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
GY K ++ +A ++ E + K +S D F L+ G GR E
Sbjct: 804 GYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEE 848
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
++ G G + +AL++ + GV + L L + G +LF + G
Sbjct: 661 IINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIG 720
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
PS VT+ ++I C++ + E LL M G P+ YN +++ YC G+T AM
Sbjct: 721 LVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAM 780
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
++ M P T S+++ C++G++ EA VF +D I+ + + L+ G+
Sbjct: 781 RVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGF 840
Query: 198 VKAREIGQANMLYEEM 213
+ +A L EM
Sbjct: 841 CTKGRMEEARGLLREM 856
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 13/189 (6%)
Query: 56 LLLRVGDYGSVWKLFKDMLRKGPR---PSSVTFNVMICGFCRQQGLVV---GESLLHLMP 109
LL + G + + +++ M RKG PS++ ++ L+V GE+ L M
Sbjct: 595 LLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSM- 653
Query: 110 KFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVI 169
D Y I+IN C +G A++ + G + T++++++ LC++G ++
Sbjct: 654 ------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLV 707
Query: 170 EARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
EA ++FD ++++G+ P+ Y L+D K A L + M KG+ P+ + +N +V
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 230 GGHYKYGRN 238
G+ K G+
Sbjct: 768 DGYCKLGQT 776
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+L+ G G + EAL + + ++G+ PS IL L + G + KL M+
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF---GCDPDAFTYNILINAYCIKGK 132
KG P+ + +N ++ G+C+ L E + ++ + PDAFT + +I YC KG
Sbjct: 754 KGLVPNIIIYNSIVDGYCK---LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGD 810
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEAR 172
A+ F ++ C +G + EAR
Sbjct: 811 MEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEAR 850
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D +TL+ ++ V I L++ R + + L IL + L +G YG L+
Sbjct: 411 DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY 470
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ M P + T+ MI G+C+ + + + + K A YN +I+A C K
Sbjct: 471 RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKK 529
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREG 166
G A + L + + G + T T++H++ G
Sbjct: 530 GMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG 565
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 6/179 (3%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NT++ G G + EA +V GV + + L ++V + +V ++ + L
Sbjct: 386 NTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLE 440
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
V N+++ F ++L MP+ PD TY +I YC G+
Sbjct: 441 AKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEE 500
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A++ N + K+ ++ ++ I+ ALC++G + A +V + + G+ + TL+
Sbjct: 501 ALEMFNELRKSSVSAAVC-YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLL 558
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 5/229 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLLRVGDYGSVWKL 69
+ V L+ + G A +L RM+ +P + +IL + L+V + V L
Sbjct: 184 NHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDL 243
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGES-LLHLMPKFGCDPDAFTYNILINAYC 128
DM R+G RP+++T+N +I + + + V ES L+ ++ + C PD++T N + A+
Sbjct: 244 LSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFG 303
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G+ + + +G EP++ TF+ ++ + + GN + V + +Q +
Sbjct: 304 GNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIV 363
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
YN ++D + +A ++ Q L+ M+ + + P CVT LV YGR
Sbjct: 364 TYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRA---YGR 409
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 48/217 (22%)
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
V++L ++ L P +++ G C+Q L M GC + Y L++
Sbjct: 136 VFELLREQLWYKPNVGIYVKLIVMLGKCKQPE--KAHELFQEMINEGCVVNHEVYTALVS 193
Query: 126 AYCIKGKTSVAMDWLNMMMKN-GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM--- 181
AY G+ A L M + C+P + T+S ++ + + V KV D + DM
Sbjct: 194 AYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQ---VFAFDKVQDLLSDMRRQ 250
Query: 182 GIAPNTTIYNTLMDGYVKAREI---------------------------------GQANM 208
GI PNT YNTL+D Y KA+ GQ M
Sbjct: 251 GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEM 310
Query: 209 L---YEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
+ YE+ + G+ P+ TFNIL+ YG++G +
Sbjct: 311 MENCYEKFQSSGIEPNIRTFNILLDS---YGKSGNYK 344
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 104/275 (37%), Gaps = 51/275 (18%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
M +HN + D + L++ FL V + D+L MR G+RP+ TI + L +
Sbjct: 211 MKSSHN-CQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPN----TITYNTL--I 263
Query: 61 GDYGSVWKLFKDM-----------------------LR--------------------KG 77
YG K+F +M LR G
Sbjct: 264 DAYGKA-KMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSG 322
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P+ TFN+++ + + +++ M K+ TYN++I+A+ G
Sbjct: 323 IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQME 382
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+M PS T +++ A R + V I++ I + +N L+D Y
Sbjct: 383 YLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAY 442
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+ + + + E M KG PD +T+ +V +
Sbjct: 443 GRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%)
Query: 3 QNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD 62
+ +N +E V + R + + EA +RM + G++P + + L L
Sbjct: 129 REYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKH 188
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
+ F G PS+ T+++++ G+ R + + M + C D YN
Sbjct: 189 VNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNA 248
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
L++A C G M G +P +F+ +HA C G+V A KV DR++
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYD 308
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+ PN +N ++ K ++ A +L +EM KG +PD T+N ++ H
Sbjct: 309 LVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYH 358
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
L+ L+ + + A + + + G+ PS +IL R R+ D K+F +ML
Sbjct: 176 LDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEML 235
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
+ + +N ++ C+ + G + M G PDA+++ I I+AYC G
Sbjct: 236 ERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVH 295
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A L+ M + P++ TF+ I+ LC+ V +A + D + G P+T YN++M
Sbjct: 296 SAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ E+ +A L M PD T+N+++ + GR
Sbjct: 356 AYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGR 398
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 1/219 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N L+ G + + M ++G++P + I GD S +K+
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M R P+ TFN +I C+ + + LL M + G +PD +TYN ++ +C
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDH 361
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ + A L+ M + C P T++ ++ L R G A ++++ + + P Y
Sbjct: 362 CEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATY 421
Query: 191 NTLMDGYVKAR-EIGQANMLYEEMRGKGVSPDCVTFNIL 228
++ G V+ + ++ +A +E M +G+ P T +L
Sbjct: 422 TVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+ L+RG+ + A V M + L A L L + GD +K+F++M
Sbjct: 212 SILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGN 271
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G +P + +F + I +C + +L M ++ P+ +T+N +I C K
Sbjct: 272 LGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDD 331
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A L+ M++ G P T+++IM C V A K+ R+ P+ YN ++
Sbjct: 332 AYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLK 391
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
++ +A ++E M + P T+ +++ G
Sbjct: 392 LLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHG 427
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 1/192 (0%)
Query: 46 SLSAITILFRLLLRVGDYGSVWKLFKDMLRKGP-RPSSVTFNVMICGFCRQQGLVVGESL 104
SL + IL +L + +W + SS F ++ + R
Sbjct: 101 SLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRA 160
Query: 105 LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR 164
+ M +FG P + L+++ C K + A ++ G PS T+S ++ R
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWAR 220
Query: 165 EGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVT 224
+ ARKVFD + + + YN L+D K+ ++ +++EM G+ PD +
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 225 FNILVGGHYKYG 236
F I + + G
Sbjct: 281 FAIFIHAYCDAG 292
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
M + E D ++M + G I V M G++P++ + L
Sbjct: 309 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
G G+ + D+ + G P V++ ++ + R + + + +M K P+ TY
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
N LI+AY G + A++ M ++G +P++ + T++ A R + V Q
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
GI NT YN+ + Y+ A E+ +A LY+ MR K V D VTF IL+ G + + E
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
Query: 52 ILFRLLLRVGDYGSVWKLFKDM-LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK 110
+L R L R G +FK M ++K + +N+MI R + L M K
Sbjct: 112 VLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQK 171
Query: 111 FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIE 170
+ C PDA TY+ LINA+ G+ AM+ ++ M++ PS +T++ +++A GN E
Sbjct: 172 WSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRE 231
Query: 171 ARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
A +V ++ D G+ P+ +N ++ Y R+ +A +E M+G V PD TFNI++
Sbjct: 232 ALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIY 291
Query: 231 GHYKYGRNGE 240
K G++ +
Sbjct: 292 CLSKLGQSSQ 301
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 9/231 (3%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
S N L+ + G EAL+V +M D GV P L I+ Y F+
Sbjct: 214 STYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFEL 273
Query: 73 MLRKGPRPSSVTFNVMICGFCR----QQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
M RP + TFN++I + Q L + S+ + C PD T+ +++ Y
Sbjct: 274 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE--KRAECRPDVVTFTSIMHLYS 331
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+KG+ M+ G +P++ +++ +M A G A V I+ GI P+
Sbjct: 332 VKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 391
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
Y L++ Y ++R+ G+A ++ MR + P+ VT+N L+ YG NG
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA---YGSNG 439
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 102/222 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ + + G + EA+++ +M G++P++ ++ L R +V +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G ++ +N I + L +L M K D+ T+ ILI+ C K
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ +L M + +S+++ A ++G V EA +F++++ G P+ Y +++
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 608
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y + + G+A L+ EM G+ PD + + L+ K G+
Sbjct: 609 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 650
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 107/264 (40%), Gaps = 44/264 (16%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ N ++R + +A + M+ +P L R G + L DM
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 74 LRKGPRPSSVTFNVMI--CG----------FCRQ------------QGLVVGE------- 102
LR PS T+N +I CG C++ +V+
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 103 ----SLLHLMPKFGCDPDAFTYNILINAYCIK--GKTSVAMDWLNMMMKN--GCEPSMAT 154
S LM PD T+NI+I YC+ G++S A+D N M + C P + T
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIII--YCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
F++IMH +G + R VF+ + G+ PN YN LM Y G A + +++
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 215 GKGVSPDCVTFNILVGGHYKYGRN 238
G+ PD V++ L+ YGR+
Sbjct: 383 QNGIIPDVVSYTCLLNS---YGRS 403
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A +V MR +P++ L G ++F+ M + G +P+ V+ ++
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
R + V +++L G + + YN I +Y + A+ M K +
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
TF+ ++ CR EA ++D+ I +Y++++ Y K ++ +A +
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 587
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGRNGEW 241
+ +M+ G PD + + ++ + Y + +W
Sbjct: 588 FNQMKMAGCEPDVIAYTSML---HAYNASEKW 616
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
M + E D ++M + G I V M G++P++ + L
Sbjct: 177 MREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
G G+ + D+ + G P V++ ++ + R + + + +M K P+ TY
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 296
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
N LI+AY G + A++ M ++G +P++ + T++ A R + V Q
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
GI NT YN+ + Y+ A E+ +A LY+ MR K V D VTF IL+ G + + E
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 84/156 (53%)
Query: 85 FNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMM 144
+N+MI R + L M K+ C PDA TY+ LINA+ G+ AM+ ++ M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 145 KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIG 204
+ PS +T++ +++A GN EA +V ++ D G+ P+ +N ++ Y R+
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 205 QANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+A +E M+G V PD TFNI++ K G++ +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ 169
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 9/231 (3%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
S N L+ + G EAL+V +M D GV P L I+ Y F+
Sbjct: 82 STYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFEL 141
Query: 73 MLRKGPRPSSVTFNVMICGFCR----QQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
M RP + TFN++I + Q L + S+ + C PD T+ +++ Y
Sbjct: 142 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE--KRAECRPDVVTFTSIMHLYS 199
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+KG+ M+ G +P++ +++ +M A G A V I+ GI P+
Sbjct: 200 VKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 259
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
Y L++ Y ++R+ G+A ++ MR + P+ VT+N L+ YG NG
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA---YGSNG 307
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 102/222 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ + + G + EA+++ +M G++P++ ++ L R +V +
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G ++ +N I + L +L M K D+ T+ ILI+ C K
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ +L M + +S+++ A ++G V EA +F++++ G P+ Y +++
Sbjct: 417 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 476
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y + + G+A L+ EM G+ PD + + L+ K G+
Sbjct: 477 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 518
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 107/264 (40%), Gaps = 44/264 (16%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ N ++R + +A + M+ +P L R G + L DM
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 74 LRKGPRPSSVTFNVMI--CG----------FCRQ------------QGLVVGE------- 102
LR PS T+N +I CG C++ +V+
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 103 ----SLLHLMPKFGCDPDAFTYNILINAYCIK--GKTSVAMDWLNMM--MKNGCEPSMAT 154
S LM PD T+NI+I YC+ G++S A+D N M + C P + T
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIII--YCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
F++IMH +G + R VF+ + G+ PN YN LM Y G A + +++
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 250
Query: 215 GKGVSPDCVTFNILVGGHYKYGRN 238
G+ PD V++ L+ YGR+
Sbjct: 251 QNGIIPDVVSYTCLLNS---YGRS 271
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A +V MR +P++ L G ++F+ M + G +P+ V+ ++
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
R + V +++L G + + YN I +Y + A+ M K +
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
TF+ ++ CR EA ++D+ I +Y++++ Y K ++ +A +
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGRNGEW 241
+ +M+ G PD + + ++ + Y + +W
Sbjct: 456 FNQMKMAGCEPDVIAYTSML---HAYNASEKW 484
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 5/174 (2%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF +M + +P + T++ +I R +L+ M + P TYN LINA
Sbjct: 33 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 92
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G A++ M NG P + T + ++ A +A F+ ++ + P+TT
Sbjct: 93 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 152
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVS--PDCVTFNILVGGHYKYGRNGE 240
+N ++ K + QA L+ MR K PD VTF ++ + Y GE
Sbjct: 153 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM---HLYSVKGE 203
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 97/177 (54%)
Query: 60 VGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFT 119
+GD + ++ + M +G + VT+ +I G+C++ + E + L+ + D
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333
Query: 120 YNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ 179
Y +L++ YC G+ A+ + M++ G + +++++ C+ G ++EA ++F R+
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 180 DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
D + P+ YNTL+DGY +A + +A L ++M K V P +T+NIL+ G+ + G
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D NTL+ G+ G + EAL + +M V P++ IL + R+G + V
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L+K ML++G ++ + ++ + L + G D T N++I+ C
Sbjct: 458 LWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLC 517
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
K + A + L+ + C+P++ T+ + H + GN+ EA V + ++ GI P
Sbjct: 518 KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+YNTL+ G K R + + L E+R +G++P T+ L+ G
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITG 620
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
++ ++ N+L+ G+ G + EA + RM D ++P L R G KL
Sbjct: 364 TNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKL 423
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
M +K P+ +T+N+++ G+ R SL +M K G + D + + L+ A
Sbjct: 424 CDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 483
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G + AM ++ G T + ++ LC+ V EA+++ D + P
Sbjct: 484 LGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQT 543
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
Y L GY K + +A + E M KG+ P +N L+ G +KY
Sbjct: 544 YQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKY 589
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 80 PSSVTFNVMICGFCRQQGLVVGESLLH-LMPKFGCDPDAFTYNILINAYCIKGKTSVAMD 138
P+++ +NV I G C+ L L L+ PD +TY ILI+ I G + A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 139 WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYV 198
+ M G P++ T++ ++ LC+ GNV A+++ ++ GI PN YNTL+DG V
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 199 KAREIGQANMLYEEMRGKGV 218
K+ + +A L E+M KG+
Sbjct: 837 KSGNVAEAMRLKEKMIEKGL 856
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
+D + LM G+ G I +A+ V M ++GVR + + L + G ++
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
F M +P T+N ++ G+CR + L M + P TYNIL+ Y
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G + MM+K G + ST++ AL + G+ EA K+++ + G+ +T
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N ++ G K ++ +A + + + P T+ L G+YK G
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 102/224 (45%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+L++G+ G++ EA V +++ + +L R G ++ +M+
Sbjct: 301 SLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEI 360
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G R ++ N +I G+C+ LV E + M + PD TYN L++ YC G A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ + M + P++ T++ ++ R G + ++ + G+ + +TL++
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
K + +A L+E + +G+ D +T N+++ G K + E
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 111/235 (47%), Gaps = 7/235 (2%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
E+ +V + +++ + G++ AL V M + G PSL + L L+R G+
Sbjct: 150 EFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVA 209
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQ----QGLVVGESLLHLMPKFGCDPDAFTYNI 122
++ M+ P T ++++ +CR + +V + G + + TYN
Sbjct: 210 LHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAK---ETESSLGLELNVVTYNS 266
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
LIN Y + G L +M + G ++ T+++++ C++G + EA VF+ +++
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ + +Y LMDGY + +I A +++ M GV + N L+ G+ K G+
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L++G+ +G + L + M GV + + L L ++GD+ KL++++L
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G ++T NVMI G C+ + + + +L + F C P TY L + Y G
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A M + G P++ ++T++ + ++ + + ++ G+ P Y L+
Sbjct: 560 AFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALIT 619
Query: 196 GYVKAREIGQANMLYEEMRGKGVS 219
G+ I +A EM KG++
Sbjct: 620 GWCNIGMIDKAYATCFEMIEKGIT 643
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 8/230 (3%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFK----- 71
L+ G+ N+GMI +A M + G+ +++ + + L R+ L +
Sbjct: 616 ALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDF 675
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
D+L G + + Q + ES+ + PK P+ YN+ I C G
Sbjct: 676 DLLLPGYQSLKEFLEASATTCLKTQK--IAESVENSTPKKLLVPNNIVYNVAIAGLCKAG 733
Query: 132 KTSVAMDWL-NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K A +++ + P T++ ++H G++ +A + D + GI PN Y
Sbjct: 734 KLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTY 793
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
N L+ G K + +A L ++ KG++P+ +T+N L+ G K G E
Sbjct: 794 NALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAE 843
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%)
Query: 45 PSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESL 104
P TIL GD + L +M KG P+ VT+N +I G C+ + + L
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRL 812
Query: 105 LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG 147
LH +P+ G P+A TYN LI+ G + AM M++ G
Sbjct: 813 LHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 39/261 (14%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
+D LN ++ G + + EA ++L + +P++ L +VG+ + +
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
+ M RKG P+ +N +I G + + L L+ + G P TY LI +C
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG------- 182
G A M++ G ++ S I ++L R + EA + +I D
Sbjct: 624 IGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ 683
Query: 183 -------------------------------IAPNTTIYNTLMDGYVKAREIGQANMLYE 211
+ PN +YN + G KA ++ A L+
Sbjct: 684 SLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFS 743
Query: 212 EMRGKG-VSPDCVTFNILVGG 231
++ PD T+ IL+ G
Sbjct: 744 DLLSSDRFIPDEYTYTILIHG 764
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 2/234 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E + + NT + F+ + +AL L RM+ VG+ P++ + R + +
Sbjct: 274 EPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIE 333
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK-FGCDPDAFTYNILINAY 127
L +DM KG P V++ ++ C+++ +V L+ M K G PD TYN LI+
Sbjct: 334 LLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHML 393
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG-IAPN 186
A+ +L + G +S I+HALC+EG + EA+ + + + G P+
Sbjct: 394 TKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPD 453
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y +++G+ + E+ +A L + M G P+ V++ L+ G + G++ E
Sbjct: 454 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 5/245 (2%)
Query: 1 MWQNHNEYESDFSV----LNTLMRGFLNVGMIFEALDVLHRMRDVG-VRPSLSAITILFR 55
+W + E F + + ++ G + EA D+++ M G P + T +
Sbjct: 403 LWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVN 462
Query: 56 LLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDP 115
R+G+ KL + M G +P++V++ ++ G CR + ++++ + P
Sbjct: 463 GFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSP 522
Query: 116 DAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF 175
++ TY+++++ +GK S A D + M+ G P + ++ +LCR+G EARK
Sbjct: 523 NSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFM 582
Query: 176 DRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
+ + G A N + T++ G+ + E+ A + ++M D T+ LV K
Sbjct: 583 EECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKK 642
Query: 236 GRNGE 240
GR E
Sbjct: 643 GRIAE 647
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 5/240 (2%)
Query: 2 WQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVG 61
W+ ++ +S+L L + L G + VL M+ G+ + A + + R G
Sbjct: 201 WRYRHDPMVYYSMLEVLSKTKLCQG----SRRVLVLMKRRGIYRTPEAFSRVMVSYSRAG 256
Query: 62 DYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYN 121
K+ M R G P+ + N I F R L L M G P+ TYN
Sbjct: 257 QLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYN 316
Query: 122 ILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI-QD 180
+I YC + A++ L M GC P ++ TIM LC+E ++E R + ++ ++
Sbjct: 317 CMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE 376
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
G+ P+ YNTL+ K +A ++ + KG D + ++ +V K GR E
Sbjct: 377 HGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSE 436
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 2/221 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+ +M G G + EA DV+ M G P I +L + L R G K ++ L
Sbjct: 528 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 587
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG + V F +I GFC+ L S+L M D FTY L++ KG+ +
Sbjct: 588 KGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAE 647
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + + M+ G +P+ T+ T++H C+ G V + + +++ + TIYN +++
Sbjct: 648 ATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM--ISRQKCRTIYNQVIE 705
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
++ +A+ L ++ D T L+ G+ K G
Sbjct: 706 KLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKG 746
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D ++ GF +G + +A +L M G +P+ + T L + R G ++
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
P+S+T++V++ G R+ L ++ M G P N+L+ + C
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+T A ++ + GC ++ F+T++H C+ + A V D + + + Y
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
TL+D K I +A L ++M KG+ P VT+ ++ + + G+
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGK 679
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 5/208 (2%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
T++ GF + AL VL M + + T L L + G +L K ML
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFT-YNILINAYCIKGKT 133
KG P+ VT+ +I +C Q G V + L+ ++ K T YN +I C+ GK
Sbjct: 657 HKGIDPTPVTYRTVIHRYC-QMGKV--DDLVAILEKMISRQKCRTIYNQVIEKLCVLGKL 713
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A L +++ T +M ++G + A KV R+ + + P+ + L
Sbjct: 714 EEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKL 773
Query: 194 MDGYVKAREIGQANMLYEEMRGKG-VSP 220
V ++ +A+ L + +G +SP
Sbjct: 774 SKRLVLKGKVDEADKLMLRLVERGHISP 801
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%)
Query: 25 VGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVT 84
G+ +A+ + + RP + + LL V Y + ++K ML G P +T
Sbjct: 197 AGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLT 256
Query: 85 FNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMM 144
+N+++ R + + L M + G PD++TYNIL++ K A+ LN M
Sbjct: 257 YNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMK 316
Query: 145 KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIG 204
+ G +PS+ ++T++ L R GN+ + D + G P+ Y ++ GYV + E+
Sbjct: 317 EVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELD 376
Query: 205 QANMLYEEMRGKGVSPDCVTFNILVGG 231
+A ++ EM KG P+ T+N ++ G
Sbjct: 377 KAKEMFREMTVKGQLPNVFTYNSMIRG 403
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
V +M + G P + IL R+G +LF +M R G P S T+N+++
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 94 RQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMA 153
+ + + L+ M + G DP Y LI+ G +L+ M+K GC P +
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVV 360
Query: 154 TFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM 213
++ ++ G + +A+++F + G PN YN+++ G A E +A L +EM
Sbjct: 361 CYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM 420
Query: 214 RGKGVSPDCVTFNILVGGHYKYGRNGE 240
+G +P+ V ++ LV K G+ E
Sbjct: 421 ESRGCNPNFVVYSTLVSYLRKAGKLSE 447
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
AL L+ M++VG+ PS+ T L L R G+ + +M++ G RP V + VMI
Sbjct: 308 ALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMIT 367
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G+ L + + M G P+ FTYN +I C+ G+ A L M GC P
Sbjct: 368 GYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNP 427
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
+ +ST++ L + G + EARKV + G
Sbjct: 428 NFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 44 RPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGL----- 98
R ++++ +L ++ G+Y ++W+L +M++ G ++ TFN++IC C + GL
Sbjct: 146 RHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICS-CGEAGLAKQAV 204
Query: 99 -------------------VVGESLLHL------------MPKFGCDPDAFTYNILINAY 127
+ SLL + M + G PD TYNIL+
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTN 264
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
GK + M ++G P T++ ++H L + + A + ++++GI P+
Sbjct: 265 YRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV 324
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
Y TL+DG +A + +EM G PD V + +++ G+
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 4/190 (2%)
Query: 32 LDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG----SVWKLFKDMLRKGPRPSSVTFNV 87
+D R+ D R S + + +LL + G + M G PS + +
Sbjct: 270 MDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT 329
Query: 88 MICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG 147
+I G R L + L M K GC PD Y ++I Y + G+ A + M G
Sbjct: 330 LIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKG 389
Query: 148 CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQAN 207
P++ T+++++ LC G EA + ++ G PN +Y+TL+ KA ++ +A
Sbjct: 390 QLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEAR 449
Query: 208 MLYEEMRGKG 217
+ EM KG
Sbjct: 450 KVIREMVKKG 459
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEA---LDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
+ D + TLM+G++ G + + L+ + R D P T + + G
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK-FGCDPDAFTYNIL 123
++ +M R G + +T+NV++ G+C+Q + E LL M + G +PD +YNI+
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR-IQDMG 182
I+ + ++ A+ + N M G P+ +++T+M A G A +VFD + D
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ + +N L++GY + I A + M+ G P+ T+ L G + + G+
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGD 647
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 107 LMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN---GCEPSMATFSTIMHALC 163
L+PK PD+ Y L+ Y G+ + L M + P T++T++ A
Sbjct: 405 LLPKVFA-PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFV 463
Query: 164 REGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM-RGKGVSPDC 222
G + AR+V + MG+ N YN L+ GY K +I +A L EM G+ PD
Sbjct: 464 NAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDV 523
Query: 223 VTFNILVGG 231
V++NI++ G
Sbjct: 524 VSYNIIIDG 532
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 98/241 (40%), Gaps = 22/241 (9%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRM-RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
N L++G+ I A D+L M D G+ P + + I+ + + D F +M
Sbjct: 491 NVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMR 550
Query: 75 RKGPRPSSVTFNVMICGFCRQ-QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+G P+ +++ ++ F Q + +M D +N+L+ YC G
Sbjct: 551 TRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLI 610
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG----------- 182
A ++ M +NG P++AT+ ++ + + + +A ++ I++
Sbjct: 611 EDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDS 670
Query: 183 --------IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF-NILVGGHY 233
+ P+ + +TL D V+A +A + M G+ P+ + I V H
Sbjct: 671 SSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHS 730
Query: 234 K 234
+
Sbjct: 731 R 731
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
Query: 44 RPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGES 103
+P IL + G + KLF +M++K +P+ VTF +I G C+ +
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 104 LLHLMPK-FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
+ H M K +G P Y LI A C G+ S A + + + A +ST++ +L
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 163 CREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDC 222
+ G E + + + + G P+T YN L++G+ + AN + +EM KG+ PD
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 223 VTFNILVGGHYKYGR 237
+++N+++G ++ +
Sbjct: 329 ISYNMILGVFFRIKK 343
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 1/205 (0%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
TL+ G + EAL + H M V GVRP++ L + L ++G+ +KL +
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+ + ++ +I + +L M + GC PD TYN+LIN +C++ +
Sbjct: 252 GKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSES 311
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A L+ M++ G +P + +++ I+ R EA +F+ + G +P+T Y + D
Sbjct: 312 ANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFD 371
Query: 196 GYVKAREIGQANMLYEEMRGKGVSP 220
G + + +A ++ +EM KG P
Sbjct: 372 GLCEGLQFEEAAVILDEMLFKGYKP 396
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 1/196 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D ++ +TL+ + G E +L M + G +P +L D S ++
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M+ KG +P +++N+++ F R + L MP+ GC PD +Y I+ + C
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ A L+ M+ G +P + LC G + KV + GIA + ++
Sbjct: 377 LQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVW 435
Query: 191 NTLMDGYVKAREIGQA 206
+ ++ K I +
Sbjct: 436 SVMIPTMCKEPVISDS 451
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V L++ F + G+ EAL + M G+R + L + V LF +M
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM 405
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
KG +PS+ T+N+++ + R+ + E+LL M G +P+ +Y LI+AY K
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKM 465
Query: 134 S-VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
S +A D M K G +PS +++ ++HA G +A F+ + GI P+ Y +
Sbjct: 466 SDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTS 525
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
++D + ++ + G+ +++ M + + +T+N L+ G K G
Sbjct: 526 VLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG 569
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 3/229 (1%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V NTLM + I E + MRD G++PS + IL R V L ++M
Sbjct: 381 VYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM 440
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGL--VVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
G P+ ++ +I + R + + + ++ L M K G P + +Y LI+AY + G
Sbjct: 441 EDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHAYSVSG 499
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
A M K G +PS+ T+++++ A R G+ + +++ + I YN
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYN 559
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
TL+DG+ K +A + E G+ P +T+N+L+ + + G++ +
Sbjct: 560 TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAK 608
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 45 PSLS---AITILFRLL--LRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLV 99
PSL+ A ++LF LL R+ DY + L ++ K +N I G Q
Sbjct: 233 PSLASPRACSVLFTLLGRERMADY--ILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYD 290
Query: 100 VGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM-DWLNMMMKNGCEPSMATFSTI 158
+ M K PD T ILI G+++ + + M + G + S F +
Sbjct: 291 DAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGL 350
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ + C EG EA + ++ GI NT +YNTLMD Y K+ I + L+ EMR KG+
Sbjct: 351 VKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGL 410
Query: 219 SPDCVTFNILVGGHYK 234
P T+NIL+ + +
Sbjct: 411 KPSAATYNILMDAYAR 426
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A D RM+ VG++PS + T L G + + F++M ++G +PS T+ ++
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLD 528
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
F R + LM + TYN L++ + +G A D ++ K G +P
Sbjct: 529 AFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
S+ T++ +M+A R G + ++ + + + P++ Y+T++ +V+ R+ +A +
Sbjct: 589 SVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYH 648
Query: 211 EEMRGKGVSPDCVTFNIL 228
+ M G PD ++ L
Sbjct: 649 KMMVKSGQVPDPRSYEKL 666
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 6/178 (3%)
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGE--SLLHLMPKFGCDPDAFTY 120
Y W++++ M + P +VT ++I R+ G E + M + G +
Sbjct: 289 YDDAWEVYEAMDKINVYPDNVTCAILITTL-RKAGRSAKEVWEIFEKMSEKGVKWSQDVF 347
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
L+ ++C +G A+ M K G + ++T+M A + ++ E +F ++D
Sbjct: 348 GGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRD 407
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
G+ P+ YN LMD Y + + L EM G+ P+ ++ L+ YGR
Sbjct: 408 KGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISA---YGRT 462
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL+ GF G+ EA DV+ +G++PS+ +L R G + +L K+M
Sbjct: 559 NTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAA 618
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+P S+T++ MI F R + +M K G PD +Y L K KT
Sbjct: 619 LNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKN 678
Query: 136 AMD 138
D
Sbjct: 679 RKD 681
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A+ V+ M G+ P SA T L L + G+ G +L + M G ++VT+N ++
Sbjct: 124 KAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALV 183
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
G C L + + + G P+AFTY+ L+ A + T A+ L+ ++ G E
Sbjct: 184 RGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGE 243
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P++ +++ ++ C+EG +A +F + G N YN L+ +AN L
Sbjct: 244 PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSL 303
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
EM G +P VT+NIL+ +GR +
Sbjct: 304 LAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%)
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
+ ++ G +P+ ++ C+ L ++ LM G PDA Y L+N C
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
+G AM + M +G + T++ ++ LC G++ ++ + +R+ G+APN
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y+ L++ K R +A L +E+ KG P+ V++N+L+ G K GR +
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDD 264
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%)
Query: 42 GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVG 101
G +P+++ T L L + ++ + M+ G P + + ++ C++ +
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 102 ESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHA 161
L+ M G + TYN L+ C+ G + ++ ++ +M+ G P+ T+S ++ A
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 162 LCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
+E EA K+ D I G PN YN L+ G+ K A L+ E+ KG +
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 222 CVTFNILV 229
V++NIL+
Sbjct: 281 VVSYNILL 288
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 2/223 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y S+ N L+RG +G + ++L + R+ G+ P+ + L +
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
KL +++ KG P+ V++NV++ GFC++ +L +P G + +YNIL+
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ--DMGIAP 185
C G+ A L M PS+ T++ ++++L G +A +V + +
Sbjct: 292 CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRV 351
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
T YN ++ K ++ +EM + P+ T+N +
Sbjct: 352 TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 85 FNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMM 144
+ +I CR+ LL+ M + G DPDA TY+ LI C++G + AM+ L++M
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 145 KN-GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREI 203
++ C+P++ F+ ++ LC+ A +VF+ + + PN T Y L++G E+
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Query: 204 GQANMLYEEMRGKGV 218
A + +E+R + V
Sbjct: 546 ELAKEVLDELRLRKV 560
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 92/203 (45%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D S L+ G + A+ ++ +M D G + L R L +G +
Sbjct: 140 DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFV 199
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ +++KG P++ T++ ++ +++G LL + G +P+ +YN+L+ +C +
Sbjct: 200 ERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKE 259
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+T AM + G + ++ +++ ++ LC +G EA + + AP+ Y
Sbjct: 260 GRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTY 319
Query: 191 NTLMDGYVKAREIGQANMLYEEM 213
N L++ QA + +EM
Sbjct: 320 NILINSLAFHGRTEQALQVLKEM 342
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 3/212 (1%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EA+ VL+ M G PS+ L R G +L M KG +P T+ ++
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
GF R + S+ M GC P+ T+N I Y +GK + M + + G
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P + T++T++ + G E VF ++ G P +NTL+ Y + QA +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGRNGEW 241
Y M GV+PD T+N ++ R G W
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAA---LARGGMW 540
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 104/232 (44%), Gaps = 12/232 (5%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG------ 64
D NTL+ + EA V M+ G S + + LL V YG
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAG----FSYDKVTYNALLDV--YGKSHRPK 331
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
K+ +M+ G PS VT+N +I + R L L + M + G PD FTY L+
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
+ + GK AM M GC+P++ TF+ + G E K+FD I G++
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
P+ +NTL+ + + + + +++EM+ G P+ TFN L+ + + G
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D TL+ GF G + A+ + MR+ G +P++ ++ G + + K
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+F ++ G P VT+N ++ F + + M + G P+ T+N LI+AY
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G AM M+ G P ++T++T++ AL R G ++ KV ++D PN
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL 560
Query: 189 IYNTLMDGYVKAREIG-----------------------------------QANMLYEEM 213
Y +L+ Y +EIG +A + E+
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 214 RGKGVSPDCVTFNILVGGHYKYGR 237
+ +G SPD T N +V YGR
Sbjct: 621 KERGFSPDITTLNSMVS---IYGR 641
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 39/261 (14%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
N + N+L+ + GM+ EA+++ ++M + G +P + T L R G S
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMI---------------------CGFCRQQGLVVGESL 104
+F++M G +P+ TFN I CG +V +L
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL--SPDIVTWNTL 460
Query: 105 LHLMPKFGCD----------------PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC 148
L + + G D P+ T+N LI+AY G AM M+ G
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 149 EPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANM 208
P ++T++T++ AL R G ++ KV ++D PN Y +L+ Y +EIG +
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 209 LYEEMRGKGVSPDCVTFNILV 229
L EE+ + P V LV
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLV 601
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 39/256 (15%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
NTL+ + G +A+ V RM D GV P LS + L R G + K+ +M
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 74 LRKGPRPSSVTFN-------------------------------------VMICGFCRQQ 96
+P+ +T+ V++C C
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC--D 608
Query: 97 GLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFS 156
L E + + G PD T N +++ Y + + A L+ M + G PSMAT++
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 157 TIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
++M+ R + ++ ++ I GI P+ YNT++ Y + + A+ ++ EMR
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 217 GVSPDCVTFNILVGGH 232
G+ PD +T+N +G +
Sbjct: 729 GIVPDVITYNTFIGSY 744
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 87/174 (50%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D + LN+++ + M+ +A VL M++ G PS++ L + R D+G
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++ +++L KG +P +++N +I +CR + + M G PD TYN I +Y
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
A+ + M+K+GC P+ T+++I+ C+ EA+ + ++++
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 5/234 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL+ F GM E V M+ G P L R G + ++
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ ML G P T+N ++ R E +L M C P+ TY L++AY
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-N 571
Query: 131 GKTSVAMDWLNMMMKNGC-EPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
GK M L + +G EP T++ + + EA + F +++ G +P+ T
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK---YGRNGE 240
N+++ Y + + + +AN + + M+ +G +P T+N L+ H + +G++ E
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%)
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ F ++ +G P T N M+ + R+Q + +L M + G P TYN L+ +
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+ + L ++ G +P + +++T+++A CR + +A ++F +++ GI P+
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
YNT + Y +A + M G P+ T+N +V G+ K R E
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 7/241 (2%)
Query: 2 WQNHNEYES--DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLR 59
+ +Y+S D SV+ ++ G + A ++ + +++ G + + T L
Sbjct: 161 FMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFAN 220
Query: 60 VGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGE--SLLHLMPKFGCDPDA 117
G Y +FK M G +P+ +T+NV++ F + G + SL+ M G PDA
Sbjct: 221 SGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKM-GTPWNKITSLVEKMKSDGIAPDA 279
Query: 118 FTYNILINAYCIKGKT-SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFD 176
+TYN LI C +G A M G T++ ++ + EA KV +
Sbjct: 280 YTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLN 338
Query: 177 RIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ G +P+ YN+L+ Y + + +A L +M KG PD T+ L+ G + G
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG 398
Query: 237 R 237
+
Sbjct: 399 K 399
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 9/236 (3%)
Query: 9 ESDFSVLNTLMRGF---LNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
ES S L ++G + A D + +D S + I+ +L + G S
Sbjct: 132 ESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSS 191
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
+F + G ++ +I F ++ M + GC P TYN+++N
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 126 AYCIKGKT-SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNV-IEARKVFDRIQDMGI 183
+ G + + M +G P T++T++ C+ G++ EA +VF+ ++ G
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGF 310
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
+ + YN L+D Y K+ +A + EM G SP VT+N L+ Y R+G
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA---YARDG 363
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 113/251 (45%), Gaps = 20/251 (7%)
Query: 2 WQNHNEYESDFSVLNTLMRGFLNVGMIFEAL-DVLHRMRDVGVRPSLSAITIL------- 53
W H VL +L+ + G + L ++ +D S + L
Sbjct: 90 WSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHK 149
Query: 54 -FRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG 112
F L LR D+ K ++ ML + ++I ++ + ++ + + + G
Sbjct: 150 KFDLALRAFDWFMKQKDYQSML------DNSVVAIIISMLGKEGRVSSAANMFNGLQEDG 203
Query: 113 CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREG---NVI 169
D ++Y LI+A+ G+ A++ M ++GC+P++ T++ I++ + G N I
Sbjct: 204 FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKI 263
Query: 170 EARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ + ++++ GIAP+ YNTL+ + +A ++EEM+ G S D VT+N L+
Sbjct: 264 TS--LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 230 GGHYKYGRNGE 240
+ K R E
Sbjct: 322 DVYGKSHRPKE 332
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y + N L+ G+ + ++ + + RP + + LL V Y +
Sbjct: 183 YPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLID 242
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+++ ML G P +T+N+++ R LL M K G PD +TYNIL++
Sbjct: 243 WVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHL 302
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
K A++ LN M + G EP + F+T++ L R G + + D +G P+
Sbjct: 303 ATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDV 362
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y ++ GY+ E+ +A +++EM KG P+ T+N ++ G G+ E
Sbjct: 363 VCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKE 415
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 80/175 (45%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D N L+ AL++L+ MR+VGV P + T L L R G +
Sbjct: 288 FSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACK 347
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ ++ G P V + VMI G+ L E + M + G P+ FTYN +I +
Sbjct: 348 YFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGF 407
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
C+ GK A L M GC P+ +ST+++ L G V+EA +V + + G
Sbjct: 408 CMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 108/227 (47%), Gaps = 5/227 (2%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALD-VLHRMRDVGVRPSLSAITILFRLLLRVGD 62
N+ Y+ + N ++ L V ++ +D V +M + G P + I+ R+G
Sbjct: 217 NYRPYKHSY---NAILHSLLGVKQ-YKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGK 272
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
+++L +M++ G P T+N+++ + +LL+ M + G +P +
Sbjct: 273 TDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT 332
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
LI+ GK +++ +K GC P + ++ ++ G + +A ++F + + G
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
PN YN+++ G+ A + +A L +EM +G +P+ V ++ LV
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLV 439
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 44 RPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGL---VV 100
R + + +L ++ G+Y ++ +L +M++ G ++ TFN++IC C + GL VV
Sbjct: 149 RHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICT-CGEAGLARDVV 207
Query: 101 GE-----------------SLLH----------------LMPKFGCDPDAFTYNILINAY 127
+ ++LH M + G PD TYNI++ A
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFAN 267
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
GKT L+ M+K+G P + T++ ++H L + A + + ++++G+ P
Sbjct: 268 FRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV 327
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ TL+DG +A ++ +E G +PD V + +++ G+ G
Sbjct: 328 IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D N +M +G +L M G P L IL L +
Sbjct: 253 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
L M G P + F +I G R L + + K GC PD Y ++I Y
Sbjct: 313 NLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGY 372
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
G+ A + M + G P++ T+++++ C G EA + ++ G PN
Sbjct: 373 ISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNF 432
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
+Y+TL++ A ++ +A+ + ++M KG
Sbjct: 433 VVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 32/255 (12%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLH-RMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
D + N+L+ F G++ + + +++ +M GV P + A+ +L +VG L
Sbjct: 92 DSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL 151
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC- 128
++ + +VT+N +I G C L M K G PD +YN LI+ +C
Sbjct: 152 LRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCK 208
Query: 129 ----IKGKTSV-AMDWLNM----------------------MMKNGCEPSMATFSTIMHA 161
++ K V + LN+ M+ +G +P + TFS+I++
Sbjct: 209 VGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINR 268
Query: 162 LCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
LC+ G V+E + +++M + PN Y TL+D KA A LY +M +G+ D
Sbjct: 269 LCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 328
Query: 222 CVTFNILVGGHYKYG 236
V + +L+ G +K G
Sbjct: 329 LVVYTVLMDGLFKAG 343
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 10/217 (4%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G + EA+ +L++M + + P+L+ I + +++K + +L G + S +
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 86 NVMICGFCR-----QQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL 140
N +I C+ + +V+G+ M G PD T+N L++ Y + A+
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGD-----MEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY 736
Query: 141 NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKA 200
++MM+ G P++AT++TI+ L G + E K ++ G+ P+ YN L+ G K
Sbjct: 737 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 796
Query: 201 REIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ + +Y EM G+ P T+N+L+ G+
Sbjct: 797 GNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGK 833
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 1/232 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D V LM G G + EA + + P++ T L L + GD S +
Sbjct: 328 DLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFII 387
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
ML K P+ VT++ MI G+ ++ L SLL M P+ FTY +I+
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKA 447
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK +A++ M G E + +++ L R G + E + + + G+ + Y
Sbjct: 448 GKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINY 507
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG-EW 241
+L+D + K + A EEM+ +G+ D V++N+L+ G K+G+ G +W
Sbjct: 508 TSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADW 559
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 4/228 (1%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
S++N L +G G + E +L M ++ V P+ T L L + Y L+
Sbjct: 264 SIINRLCKG----GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQ 319
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
M+ +G V + V++ G + L E ++ + P+ TY L++ C G
Sbjct: 320 MVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 379
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
S A + M++ P++ T+S++++ ++G + EA + +++D + PN Y T
Sbjct: 380 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
++DG KA + A L +EMR GV + + LV + GR E
Sbjct: 440 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D + N +M G L + +M+ G++PSL + I+ +L G
Sbjct: 570 EPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ M+ P+ T+ + + + + + +G YN LI C
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 689
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G T A + M G P TF+++MH +V +A + + + GI+PN
Sbjct: 690 KLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVA 749
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
YNT++ G A I + + EM+ +G+ PD T+N L+ G K G
Sbjct: 750 TYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 7/236 (2%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
++ NH Y TL+ + AL + +M G+ L T+L L +
Sbjct: 290 VYPNHVTY-------TTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKA 342
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
GD K FK +L P+ VT+ ++ G C+ L E ++ M + P+ TY
Sbjct: 343 GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
+ +IN Y KG A+ L M P+ T+ T++ L + G A ++ ++
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 462
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+G+ N I + L++ + I + L ++M KGV+ D + + L+ +K G
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 6/232 (2%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDV----GVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
T R FL+ + D + + + G++ S L L ++G + D
Sbjct: 644 TTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGD 703
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
M +G P +VTFN ++ G+ + S +M + G P+ TYN +I G
Sbjct: 704 MEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGL 763
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
WL+ M G P T++ ++ + GN+ + ++ + G+ P T+ YN
Sbjct: 764 IKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNV 823
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG--EWN 242
L+ + ++ QA L +EM +GVSP+ T+ ++ G K + EWN
Sbjct: 824 LISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWN 875
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSL---SAITILFRLLLRVGDYGSVWKL 69
S+ +TL R +L+ ++ A L M GV P +++ F + V D S+ +
Sbjct: 59 SLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSL--I 116
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
+ M+ G P NV+I FC+ L SLL D TYN +I+ C
Sbjct: 117 YSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGLCE 173
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G A +L+ M+K G P +++T++ C+ GN + A+ + D I ++ + +T
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI- 232
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
L+ Y I +A Y +M G PD VTF+ ++ K G+
Sbjct: 233 ---LLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGK 274
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 41 VGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVV 100
+ R +S LFRL L + M G P S +N +I F GLV
Sbjct: 52 IKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQF-NVNGLVH 110
Query: 101 GE-SLLH-LMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
+ SL++ M G PD F N+LI+++C G+ S A ++++ T++T+
Sbjct: 111 DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA---ISLLRNRVISIDTVTYNTV 167
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ LC G EA + + MGI P+T YNTL+DG+ K +A L +E+
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS---- 223
Query: 219 SPDCVTFNILVGGHY 233
+ +T IL+ +Y
Sbjct: 224 ELNLITHTILLSSYY 238
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 3/222 (1%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
T++ G G A+++ MR +GV + + L L R+G V L KDM+ K
Sbjct: 439 TVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSK 498
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G + + +I F + + M + G D +YN+LI+ GK V
Sbjct: 499 GVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK--VG 556
Query: 137 MDW-LNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
DW M + G EP +ATF+ +M++ ++G+ K++D+++ GI P+ N ++
Sbjct: 557 ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVG 616
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ ++ +A + +M + P+ T+ I + K+ R
Sbjct: 617 MLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR 658
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 36/260 (13%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E + +L+ L+ +G I E ++ M GV T L + + GD +
Sbjct: 466 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALA 525
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
++M +G V++NV+I G + G V + M + G +PD T+NI++N+
Sbjct: 526 WAEEMQERGMPWDVVSYNVLISGMLKF-GKVGADWAYKGMREKGIEPDIATFNIMMNSQR 584
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+G + + + M G +PS+ + + ++ LC G + EA + +++ M I PN T
Sbjct: 585 KQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLT 644
Query: 189 -----------------------------------IYNTLMDGYVKAREIGQANMLYEEM 213
+YNTL+ K +A M+ +M
Sbjct: 645 TYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 704
Query: 214 RGKGVSPDCVTFNILVGGHY 233
+G PD VTFN L+ G++
Sbjct: 705 EARGFIPDTVTFNSLMHGYF 724
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
+ + NT++RG + G+I E L M+ G+RP L ++G+ ++
Sbjct: 747 NVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIY 806
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+M+ G P + T+NV+I F ++ LL M K G P+ TY +I+ C
Sbjct: 807 CEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V NT++ G++ G + +AL RM +P + IL R + LF++M
Sbjct: 195 VYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREM 254
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
KG P+ V+FN +I GF + G + + M + GC T IL++ C +G+
Sbjct: 255 KEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRV 314
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A + ++ PS + +++ LC E + A ++ + + G P TL
Sbjct: 315 DDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTL 374
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
++G K+ +A+ E+M G+ PD VTFN+L+
Sbjct: 375 VEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLL 410
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E + NTL+RGFL+ G I E + + + M ++G R S + IL L R G
Sbjct: 260 EPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACG 319
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L D+L K PS + ++ C + V ++ + K G P L+
Sbjct: 320 LVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLR 379
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G+T A ++ MM G P TF+ ++ LC + +A ++ G P+ T
Sbjct: 380 KSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDET 439
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
Y+ L+ G+ K + +L EM K + PD T+N L+ G
Sbjct: 440 TYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDG 482
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 2/207 (0%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A D + R+ D +P++ + ++ GD + ++ M ++ +P TFN++I
Sbjct: 179 AFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILIN 236
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G+CR + L M + GC+P+ ++N LI + GK + M++ GC
Sbjct: 237 GYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRF 296
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
S AT ++ LCREG V +A + + + + P+ Y +L++ + +A +
Sbjct: 297 SEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMM 356
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGR 237
EE+ KG +P + LV G K GR
Sbjct: 357 EELWKKGQTPCFIACTTLVEGLRKSGR 383
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 58/137 (42%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A++++ + G P A T L L + G + M+ G P SVTFN+++
Sbjct: 352 AMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLR 411
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
C L L G +PD TY++L++ + +G+ +N M+ P
Sbjct: 412 DLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Query: 151 SMATFSTIMHALCREGN 167
+ T++ +M L G
Sbjct: 472 DIFTYNRLMDGLSCTGK 488
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%)
Query: 12 FSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
F TL+ G G +A + +M + G+ P +L R L +L
Sbjct: 368 FIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRL 427
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
KG P T++V++ GF ++ GE L++ M PD FTYN L++ G
Sbjct: 428 LASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Query: 132 KTS 134
K S
Sbjct: 488 KFS 490
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 7/239 (2%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
EY D T++ + G +A+D+ RM+++G P+L ++ + G G
Sbjct: 204 QEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVF---GKMGR 260
Query: 66 VWK----LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYN 121
W+ + +M KG + T + ++ R+ L + + G +P TYN
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 122 ILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
L+ + G + A+ L M +N C T++ ++ A R G EA V + +
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380
Query: 182 GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
G+ PN Y T++D Y KA + +A L+ M+ G P+ T+N ++ K R+ E
Sbjct: 381 GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+T++ G++ EA + ++ G P L ++ + G Y + K+M
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
SVT+N ++ + R ++ +M K G P+A TY +I+AY GK
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL-- 193
A+ M + GC P+ T++ ++ L ++ E K+ ++ G +PN +NT+
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 194 ------MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
MD +V N ++ EM+ G PD TFN L+ YGR G
Sbjct: 465 LCGNKGMDKFV--------NRVFREMKSCGFEPDRDTFNTLISA---YGRCG 505
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 5/235 (2%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE N L++ F G+ EAL VL M + L +R G
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ + M +KG P+++T+ +I + + L + M + GC P+ TYN +++
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 431
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALC-REGNVIEARKVFDRIQDMGIAPN 186
K +++ + L M NGC P+ AT++T++ ALC +G +VF ++ G P+
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEW 241
+NTL+ Y + A+ +Y EM G + T+N L+ R G+W
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA---LARKGDW 542
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 111/263 (42%), Gaps = 35/263 (13%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV------ 66
+ N L+ G +V+ M+ G +P+ ++ +++ + + G+Y +
Sbjct: 527 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENR 586
Query: 67 ---------WKLFKDML--------------------RKGPRPSSVTFNVMICGFCRQQG 97
W L + +L + G +P V FN M+ F R
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 646
Query: 98 LVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFST 157
E +L + + G PD TYN L++ Y +G+ A + L + K+ +P + +++T
Sbjct: 647 YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 706
Query: 158 IMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
++ CR G + EA ++ + + GI P YNT + GY + + E M
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKND 766
Query: 218 VSPDCVTFNILVGGHYKYGRNGE 240
P+ +TF ++V G+ + G+ E
Sbjct: 767 CRPNELTFKMVVDGYCRAGKYSE 789
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
+++ H Y+ D + N+++ F M +A +L +R+ G+ P L L + +R
Sbjct: 621 LFKKHG-YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRR 679
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
G+ ++ K + + +P V++N +I GFCR+ + +L M + G P FTY
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTY 739
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ 179
N ++ Y G + D + M KN C P+ TF ++ CR G EA +I+
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
N +D N L+ ++ G EA V+ M GV P+ T + + G
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
KLF M G P++ T+N ++ ++ +L M GC P+ T+N +
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
+ KG M G EP TF+T++ A R G+ ++A K++ + G
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
T YN L++ + + + +M+ KG P ++++++ + K G
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
E + +L M+ G P+ + + L G V ++F++M G P TFN +I
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI 498
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
+ R V + M + G + TYN L+NA KG + ++ M G +
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P+ ++S ++ + GN + ++ +RI++ I P+ + TL+ K R + +
Sbjct: 559 PTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERA 618
Query: 210 YEEMRGKGVSPDCVTFNILVG 230
+ + G PD V FN ++
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLS 639
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 70/165 (42%)
Query: 42 GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVG 101
G +P + + + R Y + + + G P VT+N ++ + R+
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 102 ESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHA 161
E +L + K PD +YN +I +C +G A+ L+ M + G P + T++T +
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 162 LCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQA 206
G E V + + PN + ++DGY +A + +A
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
+ Y+ + +++ G+ + A + RM++ G+ P+++ T L + G +G
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
++L M +G P+ T+N I C++ LL+ G + D TY ILI
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
C + + A+ + M K G E M + ++ A CR+ + E+ ++F + +G+ P
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 531
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
Y +++ Y K +I A + M+ G PD T+ L+ G K
Sbjct: 532 TKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 1/231 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D S ++ G G I EA L M G P + T++ L G F
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF 275
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ M+ G +P+ + F +I G C++ + +L M + G P+ +T+ LI+ C +
Sbjct: 276 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
Query: 131 GKTSVAMD-WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G T A +L ++ + +P++ T+++++ C+E + A +F R+++ G+ PN
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y TL++G+ KA G+A L M +G P+ T+N + K R E
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE 446
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 119/262 (45%), Gaps = 36/262 (13%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V+ ++R F +G + EA+ ++ M++ G+ PS + + + + +G +F +M
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+G P S ++ +M+ G R + + L M + G PD T +++ A C G
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ A+ + M+ G +P++ F++++ LC++G++ +A ++ + + G PN + L
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 194 MD------------------------------------GYVKAREIGQANMLYEEMRGKG 217
+D GY K ++ +A ML+ M+ +G
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 218 VSPDCVTFNILVGGHYKYGRNG 239
+ P+ T+ L+ GH K G G
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFG 410
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EA ++L++ G+ TIL + + D F M + G N++I
Sbjct: 446 EAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
FCRQ+ + E L L+ G P TY +I+ YC +G +A+ + + M ++GC
Sbjct: 506 AAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 565
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P T+ +++ LC++ V EA K+++ + D G++P TL Y K + A +L
Sbjct: 566 PDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL 625
Query: 210 YEEMRGK 216
E + K
Sbjct: 626 LEPLDKK 632
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
TL+ G G A ++++ M D G P++ L + ++L
Sbjct: 398 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G VT+ ++I C+Q + + M K G + D NILI A+C + K +
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+++ G P+ T+++++ C+EG++ A K F ++ G P++ Y +L+ G
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVT 224
K + +A LYE M +G+SP VT
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVT 605
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 36/258 (13%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
+L+ G G I +A ++L M G +P++ T L L + G ++LF ++
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 75 RKGP-RPSSVTFNVMICGFCRQQGLVVGE------------------------------- 102
R +P+ T+ MI G+C++ L E
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 103 ----SLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
L++LM G P+ +TYN I++ C K + A + LN G E T++ +
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ C++ ++ +A F R+ G + + N L+ + + +++ ++ L++ + G+
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 219 SPDCVTFNILVGGHYKYG 236
P T+ ++ + K G
Sbjct: 530 IPTKETYTSMISCYCKEG 547
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 3/230 (1%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E+D L++ I +AL RM G + IL R +
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 519
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF+ ++ G P+ T+ MI +C++ + + H M + GC PD+FTY LI+ C
Sbjct: 520 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 579
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
K A M+ G P T T+ + C+ + A + + + D + T
Sbjct: 580 KKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL-DKKLWIRTV 638
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
TL+ +++G A + ++++ K S D VT + G+N
Sbjct: 639 --RTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKN 686
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 6/208 (2%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
N +E+D + N L+ F + E+ + + +G+ P+ T + + GD
Sbjct: 490 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 549
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
K F +M R G P S T+ +I G C++ + L M G P T L
Sbjct: 550 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
YC + ++ AM L + K + + T T++ LC E V A F ++ +
Sbjct: 610 AYEYCKRNDSANAMILLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDS 666
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYE 211
+ + TL E G+ N++ +
Sbjct: 667 SADRV---TLAAFTTACSESGKNNLVTD 691
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 8/225 (3%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVG-DYGSVWKLFKDMLR 75
L+ + G +L++L RM++ + PS+ + R G D+ + LF +M
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 76 KGPRPSSVTFNVMICGFCRQQGL-VVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
+G +P VT+N ++ C +GL E + M G PD TY+ L+ + +
Sbjct: 241 EGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
D L M G P + +++ ++ A + G++ EA VF ++Q G PN Y+ L+
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV-----GGHYK 234
+ + ++ L+ EM+ PD T+NIL+ GG++K
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 38/263 (14%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + N L+ + G I EA+ V H+M+ G P+ + ++L L + G Y V +LF
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M P + T+N++I F +L H M + +PD TY +I A C K
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA-CGK 434
Query: 131 GK------------------------TSV------------AMDWLNMMMKNGCEPSMAT 154
G T V A+ N M + G PS+ T
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
F +++++ R G V E+ + R+ D GI N +N ++ Y + + +A Y +M
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 215 GKGVSPDCVTFNILVGGHYKYGR 237
PD T ++ Y + R
Sbjct: 555 KSRCDPDERTLEAVL-SVYSFAR 576
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 3/229 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + + L+ F + + + D+L M G P +++ +L + G +F
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M G P++ T++V++ F + L M DPDA TYNILI +
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 400
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G + + M++ EP M T+ I+ A + G +ARK+ + I P++ Y
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
+++ + +A +A + + M G +P TF+ L+ Y + R G
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL---YSFARGG 506
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 82/213 (38%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G+ +A +L M + PS A T + + Y F M G PS TF
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
+ ++ F R + E++L + G + T+N I AY GK A+ M K
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
+ C+P T ++ V E R+ F+ ++ I P+ Y ++ Y K
Sbjct: 556 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDD 615
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
N L EEM VS ++ G Y N
Sbjct: 616 VNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSN 648
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 113 CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEAR 172
C P+ Y I+I+ +G ++ + M G S+ +++ +++A R G +
Sbjct: 137 CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 196
Query: 173 KVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANM-LYEEMRGKGVSPDCVTFNILVGG 231
++ DR+++ I+P+ YNT+++ + + + L+ EMR +G+ PD VT+N L+
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
+MR + + EA+ + M + P+L A L L + + ++F++M R
Sbjct: 174 VMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDR 232
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P S T+++++ G+ ++ L + M GC PD TY+I+++ C G+ A+
Sbjct: 233 FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 292
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ M + C+P+ +S ++H E + EA F ++ G+ + ++N+L+ +
Sbjct: 293 GIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
KA + + +EM+ KGV+P+ + NI++ + G E
Sbjct: 353 CKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDE 395
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 13/208 (6%)
Query: 24 NVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL------FKDMLRKG 77
G + EAL ++ M +P+ T ++ +L V YG+ +L F +M R G
Sbjct: 284 KAGRVDEALGIVRSMDPSICKPT----TFIYSVL--VHTYGTENRLEEAVDTFLEMERSG 337
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+ FN +I FC+ + +L M G P++ + NI++ +G+ A
Sbjct: 338 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 397
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
D M+K CEP T++ ++ C + + A KV+ ++ G+ P+ ++ L++G
Sbjct: 398 DVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGL 456
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTF 225
+ R +A +L EEM G+ P VTF
Sbjct: 457 CEERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 105/251 (41%), Gaps = 35/251 (13%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
N L+ + +A +V MRD P +IL + + ++F++M+
Sbjct: 206 FNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
G P VT+++M+ C+ + ++ M C P F Y++L++ Y + +
Sbjct: 265 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 324
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT------ 188
A+D M ++G + +A F++++ A C+ + +V ++ G+ PN+
Sbjct: 325 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Query: 189 ----------------------------IYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
Y ++ + + +E+ A+ +++ MR KGV P
Sbjct: 385 RHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
Query: 221 DCVTFNILVGG 231
TF++L+ G
Sbjct: 445 SMHTFSVLING 455
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EA+D M G++ ++ L + +V+++ K+M KG P+S + N+++
Sbjct: 325 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
+ + M K C+PDA TY ++I +C K + A M K G
Sbjct: 385 RHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
PSM TFS +++ LC E +A + + + +MGI P+ + L +K L
Sbjct: 444 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFL 503
Query: 210 YEEMRGKGVSPDC 222
E+M P C
Sbjct: 504 NEKMNVLVNEPLC 516
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
T+ I++ Y K A+ N+M K P++ F+ ++ ALC+ NV +A++VF+ +
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
+D P++ Y+ L++G+ K + +A ++ EM G PD VT++I+V K GR
Sbjct: 230 RD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 239 GE 240
E
Sbjct: 289 DE 290
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V ++L+R G A +V+ + R G S+ A+ LL V + WK++K+M
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
G + TFN++I FC++ L S+ + M K G P+ ++N++I+ C G
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 134 SVAMDWL---NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
A+ L MM N P+ T++++++ C+ G + A ++ + G+ N Y
Sbjct: 270 RFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
L+D Y +A +A L +EM KG+ + V +N +V
Sbjct: 330 GALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV 368
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 43/279 (15%)
Query: 2 WQNHNEYES-----DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRL 56
W+ + E +S + + N ++ F +FEAL V +RM GV P++ + ++
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 57 LLRVGDYGSVWKLFKDM-LRKGP--RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGC 113
+ GD +L M + G P++VT+N +I GFC+ L + E + M K G
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 114 DPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG--------------------CEPSMA 153
D + TY L++AY G + A+ + M G E +M+
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 154 ---------------TFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYV 198
T + ++ LCR G V EA + +I + + + +NTLM +V
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFV 442
Query: 199 KAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ +++ A+ + M +G+S D ++F L+ G+ K G+
Sbjct: 443 RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGK 481
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 9/228 (3%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
LN M LNV I V M +G +++ ++ + +F ML
Sbjct: 186 LNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRML 245
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG------CDPDAFTYNILINAYC 128
+ G P+ V+FN+MI G C+ + L L+ K G P+A TYN +IN +C
Sbjct: 246 KCGVWPNVVSFNMMIDGACKTGDMRFA---LQLLGKMGMMSGNFVSPNAVTYNSVINGFC 302
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G+ +A M+K+G + + T+ ++ A R G+ EA ++ D + G+ NT
Sbjct: 303 KAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTV 362
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
IYN+++ +I A + +M K + D T I+V G + G
Sbjct: 363 IYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNG 410
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 10/214 (4%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITI--LFRLLLRVGDYGSVWK 68
D NTLM F+ + A +L M G+ SL AI+ L L+ G +
Sbjct: 430 DIVCHNTLMHHFVRDKKLACADQILGSMLVQGL--SLDAISFGTLIDGYLKEGKLERALE 487
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
++ M++ + V +N ++ G ++ E++++ M D TYN L+N
Sbjct: 488 IYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI----KDIVTYNTLLNESL 543
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMA--TFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
G A D L+ M K E S++ TF+ +++ LC+ G+ +A++V + + G+ P+
Sbjct: 544 KTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPD 603
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
+ Y TL+ + K R + L++ + +GV+P
Sbjct: 604 SITYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 8/228 (3%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLL----RVGDYGSVWKLFK 71
N+++ GF G LD+ R+R V+ + + L+ R G +L
Sbjct: 295 NSVINGFCKAG----RLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCD 350
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
+M KG ++V +N ++ + + S+L M D FT I++ C G
Sbjct: 351 EMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNG 410
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
A+++ + + + +T+MH R+ + A ++ + G++ + +
Sbjct: 411 YVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFG 470
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
TL+DGY+K ++ +A +Y+ M + + V +N +V G K G G
Sbjct: 471 TLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAG 518
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 4/220 (1%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
L+ + G EAL + M G+ + + L GD + +DM K
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
+ T +++ G CR + + + D +N L++ + K + A
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACA 450
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
L M+ G +F T++ +EG + A +++D + M N IYN++++G
Sbjct: 451 DQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNG 510
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
K G A + M K D VT+N L+ K G
Sbjct: 511 LSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTG 546
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 94/220 (42%), Gaps = 6/220 (2%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
++RG G + EA++ ++ + + + L +R ++ ML +G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+++F +I G+ ++ L + M K + YN ++N +G A
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAE 521
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI--YNTLMD 195
+N M + T++T+++ + GNV EA + ++Q + ++ +N +++
Sbjct: 522 AVVNAMEI----KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMIN 577
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
K +A + + M +GV PD +T+ L+ K+
Sbjct: 578 HLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKH 617
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 12/190 (6%)
Query: 58 LRVGDYGSVWKLFKDMLR--KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK----- 110
LR D S +K + L+ K + + ++N+ I GF L SL M +
Sbjct: 222 LRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVY 281
Query: 111 ---FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGN 167
FG PD TYN LI+ C+ GK A+ + + +G EP +T+ ++ C+
Sbjct: 282 GSSFG--PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYR 339
Query: 168 VIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
+ +A +++ +Q G P+T +YN L+DG +KAR++ +A L+E+M +GV C T+NI
Sbjct: 340 MDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNI 399
Query: 228 LVGGHYKYGR 237
L+ G ++ GR
Sbjct: 400 LIDGLFRNGR 409
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 70/127 (55%)
Query: 114 DPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
D ++TYN +++++ KG A L+ M +N C +AT++ I+ L + G A
Sbjct: 627 DLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASA 686
Query: 174 VFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
V DR+ G + +YNTL++ KA + +A L++ M+ G++PD V++N ++ +
Sbjct: 687 VLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNS 746
Query: 234 KYGRNGE 240
K G+ E
Sbjct: 747 KAGKLKE 753
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Query: 35 LHRMRDVGVRPS---LSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRP-SSVTFNVMIC 90
L R + V +P + + + L GD KLF+ G +S T+N M+
Sbjct: 579 LARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMS 638
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
F ++ +L M + C D TYN++I G+ +A L+ + K G
Sbjct: 639 SFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYL 698
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
+ ++T+++AL + + EA ++FD ++ GI P+ YNT+++ KA ++ +A
Sbjct: 699 DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYL 758
Query: 211 EEMRGKGVSPDCVTFNIL 228
+ M G P+ VT IL
Sbjct: 759 KAMLDAGCLPNHVTDTIL 776
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 14/178 (7%)
Query: 61 GDYGSVWKLFKDMLRKGP------RPSSVTFNVMICGFC----RQQGLVVGESLLHLMPK 110
GD + LFK+M + P T+N +I C + L+V + L
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDEL----KV 317
Query: 111 FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIE 170
G +PD TY ILI C + AM M NG P ++ ++ + V E
Sbjct: 318 SGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTE 377
Query: 171 ARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
A ++F+++ G+ + YN L+DG + L+ +++ KG D +TF+I+
Sbjct: 378 ACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIV 435
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 93/229 (40%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
+ + D N+L+ G +AL V ++ G P S IL + +
Sbjct: 283 SSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDD 342
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
+++ +M G P ++ +N ++ G + + + L M + G +TYNILI+
Sbjct: 343 AMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILID 402
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
G+ + K G TFS + LCREG + A K+ + ++ G +
Sbjct: 403 GLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSV 462
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+ ++L+ G+ K L + +R + P+ + +N V K
Sbjct: 463 DLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLK 511
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
+N + D V N L+ G L + EA + +M GVR S IL L R G
Sbjct: 351 QYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRA 410
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+ + LF D+ +KG ++TF+++ CR+ L L+ M G D T + L
Sbjct: 411 EAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSL 470
Query: 124 INAYCIKGKTSVAMDWLNMMMKN 146
+ + +G+ DW +MK+
Sbjct: 471 LIGFHKQGR----WDWKEKLMKH 489
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 18 LMRGFLNV-GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
LMR + N+ G I A+++L M D G PS + + LL+ + + K+F +
Sbjct: 137 LMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL 196
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G + N++I G C L LL P+ P+ T++ LI +C KGK A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
L M K EP TF+ ++ L ++G V E + +R++ G PN Y ++ G
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ + +A + +M G+ P +++ +V G
Sbjct: 317 LLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLG 351
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 4/202 (1%)
Query: 23 LNVGMIFEALDVLHRM----RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGP 78
LN+ + + D +H++ +GV + IL + L G+ + +L + ++
Sbjct: 174 LNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKS 233
Query: 79 RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD 138
RP+ +TF+ +I GFC + LL M K +PD T+NILI+ KG+ +D
Sbjct: 234 RPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGID 293
Query: 139 WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYV 198
L M GCEP+ T+ +++ L + +EA+++ ++ G+ P+ Y ++ G
Sbjct: 294 LLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
Query: 199 KAREIGQANMLYEEMRGKGVSP 220
+ + + + + + +M G P
Sbjct: 354 ETKSVVEMDWVLRQMVNHGFVP 375
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D LN L++G G + AL +L RP++ + L R G + +K
Sbjct: 199 EIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFK 258
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L + M ++ P ++TFN++I G ++ + G LL M GC+P+ TY ++
Sbjct: 259 LLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLL 318
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
K + A + ++ M+ G PS ++ ++ LC +V+E V ++ + G P T
Sbjct: 319 DKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTL 378
Query: 189 IYNTLMDGYV-KAREIGQANM 208
++ ++ V K + QAN+
Sbjct: 379 MWWKVVQCVVSKNNDDSQANL 399
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 112/235 (47%), Gaps = 5/235 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRM--RDVGVRPSLSAITILFRLLLRVGDYG--SV 66
D N++++ + ++ ++ + + + + RP S IL R D +V
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
++ M+ G P VT ++ + C + + L+ + + PD +TYN L+
Sbjct: 144 HRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKH 203
Query: 127 YCIKGKTSVAMDWLNMMMKN-GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
C V ++++ M + +P + +F+ ++ +C N+ EA + ++ + G P
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ +YNT+M G+ + +A +Y++M+ +GV PD +T+N L+ G K GR E
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEE 318
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
VL+ M + G+ P I R L G L K++ K P + T+N ++ C
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 94 RQQGL-VVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSM 152
+ + L VV E + + F PD ++ ILI+ C AM ++ + G +P
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
++TIM C EA V+ ++++ G+ P+ YNTL+ G KA + +A M +
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 213 MRGKGVSPDCVTFNILVGGHYKYG 236
M G PD T+ L+ G + G
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKG 349
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 3/194 (1%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
+N E D + +R G + EA D++ + + P L + L + D
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 65 SVWKLFKDMLRKG--PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
V++ F D +R +P V+F ++I C + L L+ + G PD F YN
Sbjct: 212 VVYE-FVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNT 270
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
++ +C K S A+ M + G EP T++T++ L + G V EAR + D G
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Query: 183 IAPNTTIYNTLMDG 196
P+T Y +LM+G
Sbjct: 331 YEPDTATYTSLMNG 344
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 33 DVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGP------RPSSVTFN 86
D++ +M +V +RP + + IL L + ++F+ M K + S+ FN
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFN 374
Query: 87 VMICGFCRQQGLVVGESLLHLMP-KFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
+I G C+ L E LL M + C P+A TYN LI+ YC GK A + ++ M +
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
+ +P++ T +TI+ +CR + A F ++ G+ N Y TL+ + +
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
A YE+M G SPD + L+ G + R+
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMR-DVGVRPSLSAITILFRLLLRVGDYG 64
N ++D NTL+ G VG + EA ++L RM+ + P+ L R G
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+ ++ M +P+ VT N ++ G CR GL + M K G + TY LI
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
+A C AM W M++ GC P + ++ LC+ +A +V +++++ G +
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV---GGHYKY 235
+ YN L+ + + + +M +G PD +T+N L+ G H +
Sbjct: 544 LDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 11/229 (4%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPS----LSAITILFRLLL----RVGD 62
D L L+ + EAL+V +MR G R + A +I F L+ +VG
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEKMR--GKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 63 YGSVWKLFKDM-LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYN 121
+L M L + P++VT+N +I G+CR L + ++ M + P+ T N
Sbjct: 386 LKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 122 ILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
++ C ++A+ + M K G + ++ T+ T++HA C NV +A ++++ +
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 182 GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
G +P+ IY L+ G + R A + E+++ G S D + +N+L+G
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 104/220 (47%), Gaps = 1/220 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ G V +A+ V+ ++++ G L A +L L + V+++
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEML 569
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
DM ++G +P S+T+N +I F + + E ++ M + G DP TY +I+AYC
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSV 629
Query: 131 GKTSVAMDWL-NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G+ A+ +M + + P+ ++ +++A + GN +A + + ++ + PN
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVET 689
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
YN L + + L +EM + P+ +T IL+
Sbjct: 690 YNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 36/261 (13%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G+ G + A +V+ RM++ ++P++ + + + R F DM +
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDA------------------ 117
+G + + VT+ +I C + M + GC PDA
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 118 -----------------FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
YN+LI +C K T + L M K G +P T++T++
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM-RGKGVS 219
+ + ++ +++++ G+ P T Y ++D Y E+ +A L+++M V+
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 220 PDCVTFNILVGGHYKYGRNGE 240
P+ V +NIL+ K G G+
Sbjct: 650 PNTVIYNILINAFSKLGNFGQ 670
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 116/236 (49%), Gaps = 14/236 (5%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+R F +GM+ +++ V R+ D ++ S ++ +LLR G +K+ +ML+
Sbjct: 156 NLLIRWFGRMGMVNQSVLVYERL-DSNMKNS-QVRNVVVDVLLRNGLVDDAFKVLDEMLQ 213
Query: 76 KGP--RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF---GCDPDAFTYNILINAYCIK 130
K P+ +T ++++ + + L+ E ++ L+ +F G P++ I++ C
Sbjct: 214 KESVFPPNRITADIVLHEVWKGR-LLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 272
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ + A D L+ +MKN F+ ++ L R ++ + ++ ++ I P+
Sbjct: 273 ARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTL 332
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKG------VSPDCVTFNILVGGHYKYGRNGE 240
L++ K+R + +A ++E+MRGK + D + FN L+ G K GR E
Sbjct: 333 GILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
Query: 16 NTLMRGFLNVGMIFEALD-VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM- 73
NTL+ F FE+++ ++ +MR+ G+ P+++ + VG+ KLFKDM
Sbjct: 585 NTLI-SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L P++V +N++I F + SL M P+ TYN L K +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
+ ++ M++ CEP+ T +M L +++ RK
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK 743
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 105/223 (47%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L++ LN E L +M G+ S+ + + L + + +M +G
Sbjct: 396 LVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRG 455
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P+ VTFN + G+ + + +L + G PD T++++IN C + A
Sbjct: 456 ISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAF 515
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
D M++ G EP+ T++ ++ + C G+ + K+F ++++ G++P+ YN + +
Sbjct: 516 DCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
K R++ +A L + M G+ PD T++ L+ + GR E
Sbjct: 576 CKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESE 618
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
NT + G+ G + + VL ++ G +P + +++ L R + + FK+M
Sbjct: 462 TFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEM 521
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L G P+ +T+N++I C L M + G PD + YN I ++C K
Sbjct: 522 LEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKV 581
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
A + L M++ G +P T+ST++ AL G EAR++F I+ G P++
Sbjct: 582 KKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDS 635
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y D S N M L + E + GV+P + +L + LL +
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ K M G S ++N +I C+ + + L M G P+ T+N ++ Y
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
++G L ++ +G +P + TFS I++ LCR + +A F + + GI PN
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
YN L+ + ++ L+ +M+ G+SPD +N + K
Sbjct: 531 ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCK 577
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 88/190 (46%)
Query: 35 LHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCR 94
L M+D G+ P+L GD V + + +L G +P +TF+++I CR
Sbjct: 448 LTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCR 507
Query: 95 QQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMAT 154
+ + M ++G +P+ TYNILI + C G T ++ M +NG P +
Sbjct: 508 AKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYA 567
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
++ + + C+ V +A ++ + +G+ P+ Y+TL+ ++ +A ++ +
Sbjct: 568 YNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIE 627
Query: 215 GKGVSPDCVT 224
G PD T
Sbjct: 628 RHGCVPDSYT 637
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 18/223 (8%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y D S+ + L G + ++++L +RD G R S + +L R+G
Sbjct: 106 YAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCN 165
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+F + G +PS+ +N +I + L + M GC PD FTYNILI+
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C KG A+ + M + G P++ T++ ++ G V EA K + ++ + PN
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
T + G + P C F +LVG
Sbjct: 286 ATIRTFVHGIFRCL------------------PPCKAFEVLVG 310
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%)
Query: 24 NVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSV 83
N M E L ++ + G P S LL+ D ++F + +G +P
Sbjct: 332 NNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFN 391
Query: 84 TFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMM 143
+ V++ Q G+ L M G ++YN +I+ C + A +L M
Sbjct: 392 GYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEM 451
Query: 144 MKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREI 203
G P++ TF+T + G+V + V +++ G P+ ++ +++ +A+EI
Sbjct: 452 QDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEI 511
Query: 204 GQANMLYEEMRGKGVSPDCVTFNILV 229
A ++EM G+ P+ +T+NIL+
Sbjct: 512 KDAFDCFKEMLEWGIEPNEITYNILI 537
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
++ D + ++ I +A D M + G+ P+ IL R GD
Sbjct: 491 FKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSV 550
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
KLF M G P +N I FC+ + + E LL M + G PD FTY+ LI A
Sbjct: 551 KLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKAL 610
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMAT 154
G+ S A + + + ++GC P T
Sbjct: 611 SESGRESEAREMFSSIERHGCVPDSYT 637
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 33 DVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGF 92
DV ++ +G++PS + L++ + F+ M G +P T+N++I G
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 93 CRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSM 152
C++ + L+ M + G P+ FTY ILI+ + I G+ A+ L MM P+
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 153 ATFSTIMHAL------CREGNVI-----------------------------EARKVFDR 177
AT T +H + C+ V+ E + +
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
I + G P+++ +N M +K ++ + +++ +GV P + +LV R
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQR 405
Query: 238 NGE 240
E
Sbjct: 406 FSE 408
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%)
Query: 48 SAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHL 107
S ++L L R G +L K++ G R S V+I + R +
Sbjct: 111 SLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQ 170
Query: 108 MPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGN 167
+ G P YN +I+A +A M +GC+P T++ ++H +C++G
Sbjct: 171 ISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGV 230
Query: 168 VIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
V EA ++ +++ G PN Y L+DG++ A + +A E MR + ++P+ T
Sbjct: 231 VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 228 LVGGHYK 234
V G ++
Sbjct: 291 FVHGIFR 297
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 101/259 (38%), Gaps = 41/259 (15%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G G++ EA+ ++ +M G RP++ TIL L G K + M
Sbjct: 219 NILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRV 278
Query: 76 KGPRPSSVTFNVMICGFCR-QQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
+ P+ T + G R E L+ M K + Y+ ++ YC+ +
Sbjct: 279 RKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEK-DSNLQRVGYDAVL--YCLSNNSM 335
Query: 135 VAM--DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP------- 185
+L + + G P +TF+ M L + +++E ++FD G+ P
Sbjct: 336 AKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLV 395
Query: 186 ----------------------------NTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
+ YN ++D KAR I A M EM+ +G
Sbjct: 396 LVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRG 455
Query: 218 VSPDCVTFNILVGGHYKYG 236
+SP+ VTFN + G+ G
Sbjct: 456 ISPNLVTFNTFLSGYSVRG 474
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 116 DAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF 175
D ++L NA KG ++M+ L + +G S ++ + R G VF
Sbjct: 109 DQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVF 168
Query: 176 DRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
+I +G+ P+T +YN ++D VK+ + A + +++MR G PD T+NIL+ G K
Sbjct: 169 AQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKK 228
Query: 236 G 236
G
Sbjct: 229 G 229
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 7/215 (3%)
Query: 33 DVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGP------RPSSVTFN 86
D++ +M +V +RP + + IL L + ++F+ M K + S+ FN
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374
Query: 87 VMICGFCRQQGLVVGESLLHLMP-KFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
+I G C+ L E LL M + C P+A TYN LI+ YC GK A + ++ M +
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
+ +P++ T +TI+ +CR + A F ++ G+ N Y TL+ + +
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
A YE+M G SPD + L+ G + R+ +
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMR-DVGVRPSLSAITILFRLLLRVGDYG 64
N ++D NTL+ G VG + EA ++L RM+ + P+ L R G
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+ ++ M +P+ VT N ++ G CR GL + M K G + TY LI
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
+A C AM W M++ GC P + ++ LC+ +A +V +++++ G +
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV---GGHYKY 235
+ YN L+ + + + +M +G PD +T+N L+ G H +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 7/216 (3%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
TL+ +V + +A+ +M + G P L L +V ++ + +
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G + +N++I FC + +L M K G PD+ TYN LI+ +
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG----IAPNTTIYNT 192
+ M ++G +P++ T+ ++ A C G + EA K+F +DMG + PNT IYN
Sbjct: 601 ERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF---KDMGLHSKVNPNTVIYNI 657
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
L++ + K GQA L EEM+ K V P+ T+N L
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 11/229 (4%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPS----LSAITILFRLLL----RVGD 62
D L L+ + EAL+V +MR G R + A +I F L+ +VG
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEQMR--GKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 63 YGSVWKLFKDM-LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYN 121
+L M L + P++VT+N +I G+CR L + ++ M + P+ T N
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 122 ILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
++ C ++A+ + M K G + ++ T+ T++HA C NV +A ++++ +
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 182 GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
G +P+ IY L+ G + R A + E+++ G S D + +N+L+G
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 36/261 (13%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G+ G + A +V+ RM++ ++P++ + + + R F DM +
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDA------------------ 117
+G + + VT+ +I C + M + GC PDA
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 118 -----------------FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
YN+LI +C K + L M K G +P T++T++
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM-RGKGVS 219
+ + ++ +++++ G+ P T Y ++D Y E+ +A L+++M V+
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 220 PDCVTFNILVGGHYKYGRNGE 240
P+ V +NIL+ K G G+
Sbjct: 650 PNTVIYNILINAFSKLGNFGQ 670
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ G V +A+ V+ ++++ G L A +L L + V+++
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
DM ++G +P S+T+N +I F + + E ++ M + G DP TY +I+AYC
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSV 629
Query: 131 GKTSVAMD-WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G+ A+ + +M + + P+ ++ +++A + GN +A + + ++ + PN
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVET 689
Query: 190 YNTL 193
YN L
Sbjct: 690 YNAL 693
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 116/234 (49%), Gaps = 14/234 (5%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+R F +GM+ +++ V R+ D ++ S ++ +LLR G +K+ +ML+K
Sbjct: 158 LIRWFGRMGMVNQSVLVYERL-DSNMKNS-QVRNVVVDVLLRNGLVDDAFKVLDEMLQKE 215
Query: 78 P--RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF---GCDPDAFTYNILINAYCIKGK 132
P+ +T ++++ +++ L+ E ++ L+ +F G P++ I++ C +
Sbjct: 216 SVFPPNRITADIVLHEVWKER-LLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
+ A D L+ +MKN F+ ++ L R ++ + ++ ++ I P+
Sbjct: 275 ANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGI 334
Query: 193 LMDGYVKAREIGQANMLYEEMRGKG------VSPDCVTFNILVGGHYKYGRNGE 240
L++ K+R + +A ++E+MRGK + D + FN L+ G K GR E
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 33 DVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGP------RPSSVTFN 86
D++ +M +V +RP + + IL L + ++F+ M K + S+ FN
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374
Query: 87 VMICGFCRQQGLVVGESLLHLMP-KFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
+I G C+ L E LL M + C P+A TYN LI+ YC GK A + ++ M +
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
+ +P++ T +TI+ +CR + A F ++ G+ N Y TL+ + +
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
A YE+M G SPD + L+ G + R+
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMR-DVGVRPSLSAITILFRLLLRVGDYG 64
N ++D NTL+ G VG + EA ++L RM+ + P+ L R G
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+ ++ M +P+ VT N ++ G CR GL + M K G + TY LI
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
+A C AM W M++ GC P + ++ LC+ +A +V +++++ G +
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV---GGHYKY 235
+ YN L+ + + + +M +G PD +T+N L+ G H +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 42/222 (18%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ G V +A+ V+ ++++ G L A +L L + V+++
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
DM ++G +P S+T+N +I F + + E ++ M + G DP TY +I+AYC
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSV 629
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG----IAPN 186
G+ A+ K+F +DMG + PN
Sbjct: 630 GELDEAL-----------------------------------KLF---KDMGLHSKVNPN 651
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
T IYN L++ + K GQA L EEM+ K V P+ T+N L
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 11/229 (4%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPS----LSAITILFRLLL----RVGD 62
D L L+ + EAL+V +MR G R + A +I F L+ +VG
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEQMR--GKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 63 YGSVWKLFKDM-LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYN 121
+L M L + P++VT+N +I G+CR L + ++ M + P+ T N
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 122 ILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
++ C ++A+ + M K G + ++ T+ T++HA C NV +A ++++ +
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 182 GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
G +P+ IY L+ G + R A + E+++ G S D + +N+L+G
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 36/261 (13%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G+ G + A +V+ RM++ ++P++ + + + R F DM +
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDA------------------ 117
+G + + VT+ +I C + M + GC PDA
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 118 -----------------FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
YN+LI +C K + L M K G +P T++T++
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM-RGKGVS 219
+ + ++ +++++ G+ P T Y ++D Y E+ +A L+++M V+
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 220 PDCVTFNILVGGHYKYGRNGE 240
P+ V +NIL+ K G G+
Sbjct: 650 PNTVIYNILINAFSKLGNFGQ 670
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 116/234 (49%), Gaps = 14/234 (5%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+R F +GM+ +++ V R+ D ++ S ++ +LLR G +K+ +ML+K
Sbjct: 158 LIRWFGRMGMVNQSVLVYERL-DSNMKNS-QVRNVVVDVLLRNGLVDDAFKVLDEMLQKE 215
Query: 78 P--RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF---GCDPDAFTYNILINAYCIKGK 132
P+ +T ++++ +++ L+ E ++ L+ +F G P++ I++ C +
Sbjct: 216 SVFPPNRITADIVLHEVWKER-LLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNAR 274
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
+ A D L+ +MKN F+ ++ L R ++ + ++ ++ I P+
Sbjct: 275 ANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGI 334
Query: 193 LMDGYVKAREIGQANMLYEEMRGKG------VSPDCVTFNILVGGHYKYGRNGE 240
L++ K+R + +A ++E+MRGK + D + FN L+ G K GR E
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
Query: 16 NTLMRGFLNVGMIFEALD-VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM- 73
NTL+ F FE+++ ++ +MR+ G+ P+++ + VG+ KLFKDM
Sbjct: 585 NTLI-SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L P++V +N++I F + SL M P+ TYN L K +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
+ ++ M++ CEP+ T +M L +++ RK
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK 743
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 32 LDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICG 91
LD+ M V P + TI+ + D V+ LFKDM R+ P VT+ V++
Sbjct: 683 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
Query: 92 FCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPS 151
+ +L M F PD F Y +LI+ C G A + M+++G +P
Sbjct: 743 KPER-------NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPD 795
Query: 152 MATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYE 211
A ++ ++ C+ G + EA+ +FDR+ + G+ P+ Y L+ G + + +A L +
Sbjct: 796 AAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVK 855
Query: 212 EMRGKGVSPDCVTFNILVGGHY 233
EM KG+ P T L HY
Sbjct: 856 EMLEKGIKP---TKASLSAVHY 874
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 8/222 (3%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + N L G G+ EA + L M + GV+P+ ++ L+ G+ +
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFY 524
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVG-ESLLHLMPKFGCDPDAFTYNILINAYCI 129
+ + K R + + M+ GFC L E + L P + + + +
Sbjct: 525 ESLEHKS-RENDAS---MVKGFCAAGCLDHAFERFIRLEFPL---PKSVYFTLFTSLCAE 577
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
K S A D L+ M K G EP + + ++ A CR NV +AR+ F+ + I P+
Sbjct: 578 KDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFT 637
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
Y +++ Y + E QA L+E+M+ + V PD VT+++L+
Sbjct: 638 YTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%)
Query: 83 VTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNM 142
+ + ++ G C + + ES++ M K G DPD + Y+ +I + A+D N
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 143 MMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKARE 202
M+K + S+I+ C+ GN EA +F ++ I+ + YN D K +
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 203 IGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ +A L+ EM GKG++PD + + L+GG
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGG 440
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 37/259 (14%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
MW+ E E S+ L+ + V + +A + + + P L TI+ R+
Sbjct: 591 MWKLGVEPEK--SMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRL 648
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
+ + LF+DM R+ +P VT++V++ + M F PD Y
Sbjct: 649 NEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPEL-------DMKREMEAFDVIPDVVYY 701
Query: 121 NILINAYC----IKGKTSVAMDW-----------LNMMMKNGCE-------------PSM 152
I+IN YC +K ++ D +++KN E P +
Sbjct: 702 TIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDV 761
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
++ ++ C+ G++ EA+++FD++ + G+ P+ Y L+ K + +A M+++
Sbjct: 762 FYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDR 821
Query: 213 MRGKGVSPDCVTFNILVGG 231
M GV PD V + L+ G
Sbjct: 822 MIESGVKPDVVPYTALIAG 840
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 90/213 (42%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D V + ++ G I +A+DV ++M R + ++ + + ++G++ +
Sbjct: 323 DPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYD 382
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LFK+ V +NV + + L M G PD Y LI C
Sbjct: 383 LFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCC 442
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
++GK S A D + M G P + ++ + L G EA + +++ G+ P
Sbjct: 443 LQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYV 502
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
+N +++G + A E+ +A YE + K D
Sbjct: 503 THNMVIEGLIDAGELDKAEAFYESLEHKSREND 535
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%)
Query: 36 HRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQ 95
M+ V+P + T+L ++GD G ++F M+ G P + + +I C+
Sbjct: 750 REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
L + + M + G PD Y LI C G A+ + M++ G +P+ A+
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASL 869
Query: 156 STIMHA 161
S + +A
Sbjct: 870 SAVHYA 875
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 85/214 (39%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
++RG I +A V+ M G+ P + + + + + +F ML+K
Sbjct: 297 VVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKR 356
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
R + V + ++ +C+ L + D YN+ +A GK A+
Sbjct: 357 KRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAI 416
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ M G P + ++T++ C +G +A + + G P+ IYN L G
Sbjct: 417 ELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGL 476
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+A + M +GV P VT N+++ G
Sbjct: 477 ATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEG 510
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 9/234 (3%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMR-DVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
V L++ + N+ M EA+D+ R +G P + A+ L ++ G V F +
Sbjct: 148 VSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWE 207
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLL-HLMPKFGCDPDAFTYNILINAYCIKG 131
+ R G + T+ +++ R E LL L+ +P F N I C+
Sbjct: 208 IERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLN-FIEGLCLNQ 266
Query: 132 KTSVAMDWLNMM-----MKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
T +A L + + + + +A + ++ LC E + +A V ++ GI P+
Sbjct: 267 MTDIAYFLLQPLRDANILVDKSDLGIA-YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPD 325
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+Y+ +++G+ K I +A ++ +M K +CV + ++ + + G E
Sbjct: 326 VYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSE 379
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
ALD+L +MR G P + T L + L G K D+ +G V I
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
G + +G+ G L + G PD Y++LI A C +T A N M+ G +P
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
++AT+++++ C+EG + R+ + P+ Y +L+ G + +A +
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 211 EEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
EM+GK P+ +TF L+ G K G +GE
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLCKCGWSGE 737
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 3/199 (1%)
Query: 35 LHRMRDV---GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICG 91
L RD+ G P + A +L + L + LF +M+ KG +P+ T+N MI G
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDG 658
Query: 92 FCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPS 151
+C++ + G S + M + +PD TY LI+ C G+ S A+ N M C P+
Sbjct: 659 WCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPN 718
Query: 152 MATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYE 211
TF ++ LC+ G EA F +++ + P++ +Y +L+ ++ + I ++
Sbjct: 719 RITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFR 778
Query: 212 EMRGKGVSPDCVTFNILVG 230
EM KG P V N ++
Sbjct: 779 EMVHKGRFPVSVDRNYMLA 797
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 98/229 (42%), Gaps = 2/229 (0%)
Query: 12 FSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
+S + LM + + G + E + +L + + + P +++I+ L++ L
Sbjct: 406 YSFIQNLMGNYESDG-VSEIVKLL-KDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLH 463
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
D+++ G P + +N +I G C++ LL M G +P FT N + +
Sbjct: 464 DIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERC 523
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
A+D L M G EP + + ++ LC G ++A K D + G +
Sbjct: 524 DFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAST 583
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+DG +K + + L+ ++ G PD + +++L+ K R E
Sbjct: 584 AAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 80 PSSVTFNVMICGFCRQQGLVVG--ESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P++ T+N ++ + V E+ L M G D FT ++ YC GK+ A+
Sbjct: 175 PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 138 DWLNMMMKNG-CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
N ++ G + ++T + + C+ G V +A ++ + +++ I N Y L+ G
Sbjct: 235 SVFNEILSRGWLDEHISTILVV--SFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHG 292
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
+VK I +A L+E+MR G++ D +++L+GG K+
Sbjct: 293 FVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKH 331
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGV-RPSLSAITILFRLLLRVGDYGS--VWKLFKDML 74
+R N G++ EA V R+R++G+ P+ L + + V K+M
Sbjct: 147 FIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMR 206
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
G T ++ +C S+ + + G D IL+ ++C G+
Sbjct: 207 DCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCKWGQVD 265
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A + + M+ + + T+ ++H +E + +A ++F++++ MG+ + +Y+ L+
Sbjct: 266 KAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLI 325
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPD 221
G K +++ A LY E++ G+ PD
Sbjct: 326 GGLCKHKDLEMALSLYLEIKRSGIPPD 352
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 14/245 (5%)
Query: 1 MWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRV 60
+ +++N S V + L++ L+ I A+ V+ ++R G+ +S L + R
Sbjct: 151 LIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRR 210
Query: 61 GDYGSVWKLFK----------DMLRK---GPRPSSVTFNVMICGFCRQQGLVVGESLLHL 107
+ +K+++ D +K +P++ TFN M+ F R+ + E +
Sbjct: 211 RGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWRE 270
Query: 108 MPK-FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREG 166
M + GC P+ ++YN+L+ AYC +G S A M G + ++T++ LC
Sbjct: 271 MEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNF 330
Query: 167 NVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFN 226
V++A+++F + GI Y L++GY KA ++ ++Y EM+ KG D +T
Sbjct: 331 EVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIE 390
Query: 227 ILVGG 231
LV G
Sbjct: 391 ALVEG 395
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 5/225 (2%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRD-VGVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
+ N++M F G + M + VG P++ + +L G K+++
Sbjct: 246 TTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWE 305
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
+M +G V +N MI G C +V + L M G + TY L+N YC G
Sbjct: 306 EMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAG 365
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALC--REGN-VIEARKVF-DRIQDMGIAPNT 187
+ M + G E T ++ LC R+G V+EA + D +++ P+
Sbjct: 366 DVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSR 425
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
Y L+ + ++ +A + EM GKG P T+ + G+
Sbjct: 426 NCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGY 470
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 5/196 (2%)
Query: 37 RMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQ 96
R+R V +P ++A +L L + G L + M R +P + TFNV+ G+CR +
Sbjct: 225 RIR-VKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVR 282
Query: 97 GLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG---CEPSMA 153
LL M + G P+ FTY I+ +C G A D + M+ G P+
Sbjct: 283 DPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 154 TFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM 213
TF+ ++ AL + E ++ R+ G P+ + Y +++G A ++ +A +EM
Sbjct: 343 TFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEM 402
Query: 214 RGKGVSPDCVTFNILV 229
KG PD VT+N +
Sbjct: 403 SNKGYPPDIVTYNCFL 418
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 104/271 (38%), Gaps = 41/271 (15%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ + + N L+ G++ E +L RMR V+P + +LF RV D K
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLV----------------------------- 99
L ++M+ G +P + T+ I FC Q G+V
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFC-QAGMVDEAADLFDFMITKGSAVSAPTAKTFALMI 348
Query: 100 -------VGESLLHL---MPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
E L M GC PD TY +I C+ K A +L+ M G
Sbjct: 349 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P + T++ + LC EA K++ R+ + AP+ YN L+ + + + A
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNT 468
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ EM + D T+ ++ G + R E
Sbjct: 469 WTEMDKRDCVQDVETYCAMINGLFDCHRAKE 499
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
S+F+ + L+ G+ + +AL +L M + G P +A L L + Y + +L
Sbjct: 408 SEFT-YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
FK++ SS + VMI F + L L + M G PD + YN L++
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G + A L M +NGC + + + I++ R G A ++F+ I+ GI P+
Sbjct: 527 AGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
YNTL+ + A +A + EM+ KG D +T++ ++
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 36/265 (13%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+ TL+ + VG + +ALD+ M+ G P++ T L + L + G + +KDM
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 74 LRKGPRPSSVTFNVMI------------------CGFCRQQGLVVG---------ESLLH 106
LR G P V N ++ G R VV ES H
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 107 L---------MPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFST 157
+ M P FTY+ILI+ YC + A+ L M + G P A + +
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 158 IMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
+++AL + A ++F +++ ++ +Y ++ + K ++ +A L+ EM+ +G
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
Query: 218 VSPDCVTFNILVGGHYKYGRNGEWN 242
PD +N L+ G K G E N
Sbjct: 510 SGPDVYAYNALMSGMVKAGMINEAN 534
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 7/231 (3%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + L+ + +G A+ + M+D ++P+ T L + +VG LF
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++M R G P+ T+ +I G + + M + G PD N L+N I
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN---IL 348
Query: 131 GKTSVAMDWLNMMMKNG---CEPSMATFSTIMHALCR-EGNVIEARKVFDRIQDMGIAPN 186
GK + N+ + G C P++ +++T++ AL + +V E FD+++ ++P+
Sbjct: 349 GKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y+ L+DGY K + +A +L EEM KG P + L+ K R
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 2/235 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRM-RDVGVRPSLSAITILFRLLLRVGDYGSV 66
++ D S TL+R + E + + R+ V S + ++ L + L R
Sbjct: 122 FQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKA 181
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQ-QGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
+F + +P+S T+N +I ++ Q V E + + C PD TY+ LI+
Sbjct: 182 LSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALIS 241
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
+Y G+ A+ + M N +P+ ++T++ + G V +A +F+ ++ G +P
Sbjct: 242 SYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSP 301
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y L+ G KA + +A Y++M G++PD V N L+ K GR E
Sbjct: 302 TVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEE 356
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 107/226 (47%), Gaps = 7/226 (3%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
+VL+ L++ M+ +AL V ++ + +P+ S + +L++ G + V +++ +
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 73 MLRKGP-RPSSVTFNVMICGFCRQQGLVVGESLLHLMP--KFGC-DPDAFTYNILINAYC 128
M +G P ++T++ +I + + L +S + L K C P Y L+ Y
Sbjct: 223 MCNEGDCFPDTITYSALISSY---EKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
GK A+D M + GC P++ T++ ++ L + G V EA + + G+ P+
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
N LM+ K + + ++ EM +P V++N ++ ++
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFE 385
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V +++ F G + EA+D+ + M++ G P + A L +++ G L + M
Sbjct: 481 VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
G R + N+++ GF R + + G PD TYN L+ + G
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNV 168
A + M G E T+S+I+ A+ GNV
Sbjct: 601 EEAARMMREMKDKGFEYDAITYSSILDAV---GNV 632
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 43 VRPSLSAI--TILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVV 100
++PS I + ++ + D KLF +ML +G +P + TF +I C +Q V
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIIS--CARQNGVP 226
Query: 101 GESL--LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI 158
++ M FGC+PD T +I+AY G +A+ + TFST+
Sbjct: 227 KRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTL 286
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ GN +++ ++ +G+ PN IYN L+D +A+ QA ++Y+++ G
Sbjct: 287 IRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGF 346
Query: 219 SPDCVTFNILVG--GHYKYGRNG 239
+P+ T+ LV G +YG +
Sbjct: 347 TPNWSTYAALVRAYGRARYGDDA 369
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 44/247 (17%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK-- 68
D +TL+R + G L++ M+ +GV+P+L I RL+ +G W+
Sbjct: 279 DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNL---VIYNRLIDSMGRAKRPWQAK 335
Query: 69 -LFKDMLRKGPRPSSVTFNVMICGFCR---------------QQGL----VVGESLLHLM 108
++KD++ G P+ T+ ++ + R ++GL ++ +LL +
Sbjct: 336 IIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMC 395
Query: 109 PK-----------------FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPS 151
CDPD++T++ LI Y G+ S A L M + G EP+
Sbjct: 396 ADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPT 455
Query: 152 MATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD--GYVKAREIGQANML 209
+ ++++ + V + + FD++ ++GI P+ L++ + EIG+
Sbjct: 456 LFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGC 515
Query: 210 YEEMRGK 216
E+ + K
Sbjct: 516 VEKAKPK 522
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 78/142 (54%)
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
MLR P+++T+N MI GFC+Q + + +L M GC PD T++ LIN YC +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
M+ M + G + T++T++H C+ G++ A+ + + + G+AP+ ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 193 LMDGYVKAREIGQANMLYEEMR 214
++ G +E+ +A + E+++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%)
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV 174
P TYN +I+ +C + + A L+ M GC P + TFST+++ C+ V ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 175 FDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
F + GI NT Y TL+ G+ + ++ A L EM GV+PD +TF+ ++ G
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++ M KG P VTF+ +I G+C+ + + G + M + G + TY LI+ +
Sbjct: 31 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 90
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
C G A D LN M+ G P TF ++ LC + E RK F ++D+
Sbjct: 91 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK---ELRKAFAILEDL 141
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 51/87 (58%)
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P+ T+++++ C++ V +A+++ D + G +P+ ++TL++GY KA+ + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 210 YEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ EM +G+ + VT+ L+ G + G
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVG 94
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N+++ GF + +A +L M G P + + L + + ++F +M R
Sbjct: 14 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 73
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G ++VT+ +I GFC+ L + LL+ M G PD T++ ++ C K +
Sbjct: 74 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 133
Query: 136 AMDWLNMMMKN 146
A L + K+
Sbjct: 134 AFAILEDLQKS 144
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 182 GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
I P T YN+++DG+ K + A + + M KG SPD VTF+ L+ G+ K R
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 64/283 (22%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLR------------------ 59
L+ GF G + +A+D+L RM D G+ P +L ++L +
Sbjct: 384 LIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Query: 60 -------VGDYGS----VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLM 108
+ D G+ V L ++ RK ++V V+ C Q+ + S + M
Sbjct: 444 CGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKM 503
Query: 109 PKFGCDP-----------------------------------DAFTYNILINAYCIKGKT 133
GC P D TY I++N C K
Sbjct: 504 VNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR 563
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A ++ M + G P++A +S+I+ +L ++G V+EA + F ++ + GI P+ Y +
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
++ Y + I +AN L EE+ + P T+ +L+ G K G
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 39/249 (15%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G + EA + +M + G++P A I+ R G +L +++++ RPSS T+
Sbjct: 596 GRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTY 655
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
V+I GF + + G L M + G P+ Y LI + KG + +M +
Sbjct: 656 TVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGE 715
Query: 146 NGCEPSMATFSTIMHALCRE--------------------------------------GN 167
N + + T++ L R G+
Sbjct: 716 NDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGS 775
Query: 168 VIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
A +V +++ I PN ++NT++ GY A + +A E M+ +G+ P+ VT+ I
Sbjct: 776 KSFAMEVIGKVKK-SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTI 834
Query: 228 LVGGHYKYG 236
L+ H + G
Sbjct: 835 LMKSHIEAG 843
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 101/219 (46%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N++++ +I + +++ ++++ P + I+ L + D + + + M
Sbjct: 516 NSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEE 575
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G RP+ ++ +I +Q +V E M + G PD Y I+IN Y G+
Sbjct: 576 LGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDE 635
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + + ++K+ PS T++ ++ + G + + + D++ + G++PN +Y L+
Sbjct: 636 ANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIG 695
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
++K + + L+ M + D + + L+ G ++
Sbjct: 696 HFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWR 734
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 81/170 (47%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A ++ M ++G+RP+++ + + L + G + F ML G +P + + +MI
Sbjct: 566 AFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMIN 625
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
+ R + L+ + K P +FTY +LI+ + G +L+ M+++G P
Sbjct: 626 TYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKA 200
++ ++ ++ ++G+ + +F + + I + Y TL+ G +A
Sbjct: 686 NVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRA 735
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NT++ G+ G + EA + L M+ G+ P+L TIL + + GD S LF+
Sbjct: 798 NTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG--- 854
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P V ++ ++ G C + + +L+ M K G +P+ +Y L+ C T
Sbjct: 855 TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTME 914
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF 175
A+ + M P + +++ LC E + EAR +F
Sbjct: 915 AVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 5/172 (2%)
Query: 60 VGDYGSVWKLFKDM--LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDA 117
+G+YGS + + ++K P+ N +I G+C L + L M K G P+
Sbjct: 770 LGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNL 829
Query: 118 FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR 177
TY IL+ ++ G A+D CEP +ST++ LC ++A +
Sbjct: 830 VTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLE 886
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+Q GI PN Y L+ +R +A + ++M + P + L+
Sbjct: 887 MQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLI 938
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 2/214 (0%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRP-SLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
L +G G + EA+ +L + + P ++ LF + G LF M
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G V + ++ +C+ + + L M + + D +N LI+ + G
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF-DRIQDMGIAPNTTIYNTLMD 195
+ M+K G + ++ T+ ++ + C+EGNV A ++F + I+ N Y L+
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
G+ K + +A L M G+ PD +T+ +L+
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLL 420
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 105/245 (42%), Gaps = 37/245 (15%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITIL-------------FRLL 57
D SVL++++ + + EA L R+ G PS ++ +++ F
Sbjct: 130 DSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCF 189
Query: 58 LRVGDYGS---VW---KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF 111
+V + GS +W +LFK + G ++ +CG R MP
Sbjct: 190 EQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTR-------------MP-- 234
Query: 112 GCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEA 171
Y L +C +G + A + M +G ++ +M C++ N+ A
Sbjct: 235 ---LPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMA 291
Query: 172 RKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+++ R+ + + I+NTL+ G++K + + +++ +M KGV + T++I++G
Sbjct: 292 MRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGS 351
Query: 232 HYKYG 236
+ K G
Sbjct: 352 YCKEG 356
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+L+ M+ + FN +I GF + L G + M K G + FTY+I+I +Y
Sbjct: 293 RLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSY 352
Query: 128 CIKGKTSVAMD-WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
C +G A+ ++N ++ ++ ++ ++G + +A + R+ D GI P+
Sbjct: 353 CKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPD 412
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEM--RGKGVSPDCV 223
Y L+ K E+ A ++ + + G G++P +
Sbjct: 413 HITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVI 451
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P P ++ ++ C FC++ E+L M G D Y L+ YC ++AM
Sbjct: 234 PLPVNLYKSLFYC-FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAM 292
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
M++ E F+T++H + G + + R +F ++ G+ N Y+ ++ Y
Sbjct: 293 RLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSY 352
Query: 198 VKAREIGQANMLYEEMRG-KGVSPDCVTFNILVGGHYKYG 236
K + A L+ G + +S + + L+ G YK G
Sbjct: 353 CKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 5/239 (2%)
Query: 4 NHNEYESDFSVLNTLMRGFLNV-GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD 62
N ++Y D N ++ G+ NV G EA V M +VGV+ + + + + + G
Sbjct: 258 NKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGS 317
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK-FGCDPDAFTYN 121
V KLF M ++ P +N ++ + + +L+ M + G +P+ TYN
Sbjct: 318 LNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYN 377
Query: 122 ILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
LI C KT A + M++ G P++ T+ M L R G E ++ +++ M
Sbjct: 378 SLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE--EVFELLAKMRKM 434
Query: 182 GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
G P Y L+ + R+ +L++EM+ K V PD ++ +++ G + G+ E
Sbjct: 435 GCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEE 493
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLR---VGDYGSVWKLFKDML 74
++R + V + +A++ H + + + L L R V D G + KD
Sbjct: 203 MIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKD-- 260
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLV-VGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
K P + +FN+++ G+C G E + M G D +Y+ +I+ Y G
Sbjct: 261 -KYPFDAK-SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSL 318
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD-MGIAPNTTIYNT 192
+ + + M K EP ++ ++HAL + V EAR + +++ GI PN YN+
Sbjct: 319 NKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNS 378
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFN 226
L+ KAR+ +A +++EM KG+ P T++
Sbjct: 379 LIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 412
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRD-VGVRPSLSAITILFRLLLRVGDYGSVW 67
E D V N ++ + EA +++ M + G+ P++ L + L +
Sbjct: 334 EPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAK 393
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHL---MPKFGCDPDAFTYNILI 124
++F +ML KG P+ T++ + + L GE + L M K GC+P TY +LI
Sbjct: 394 QVFDEMLEKGLFPTIRTYHAFM------RILRTGEEVFELLAKMRKMGCEPTVETYIMLI 447
Query: 125 NAYC-IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
C + +V + W + M + P ++++ ++H L G + EA + ++D G+
Sbjct: 448 RKLCRWRDFDNVLLLW-DEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGM 506
Query: 184 APNTTIYNTLMDGY 197
PN + + + +
Sbjct: 507 RPNENVEDMIQSWF 520
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 46/267 (17%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLL-----LRVGD--Y 63
D N+L+ G+ + G+ +A+ VL RM+ G++PS S+I+ L + + L++G +
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 64 GSVWK--LFKDM----------LRKGPRPSS------------VTFNVMICGFCRQQGLV 99
G + + L+ D+ ++ G P + V +N ++ G L
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 100 VGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIM 159
E+L+ M K G PDA T+N L + Y GK A+D + M + G P++ +++ I
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 368
Query: 160 HALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
+ GN A KVF ++Q+ G+ PN +TL+ + +G ++L+ GK V
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL------KILGCLSLLHS---GKEVH 419
Query: 220 PDCVTFNILVGGHYK------YGRNGE 240
C+ N++ + YG++G+
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGD 446
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+L G+ +G +ALDV+ +M++ GV P++ + T +F + G++ + K+F
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 71 KDMLRKGPRPSSVTFNVM---------------ICGFCRQQGLV----VGESLLHLMPKF 111
M +G P++ T + + + GFC ++ L+ V +L+ + K
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKS 444
Query: 112 GCDPDAF------------TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIM 159
G A ++N ++ Y + G+ + ++M++ G EP TF++++
Sbjct: 445 GDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Query: 160 HALCREGNVIEARKVFDRIQD-MGIAPNTTIYNTLMD 195
G V E K FD ++ GI P + ++D
Sbjct: 505 SVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVD 541
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 8/229 (3%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
ES+ S+ N+L+ + G + + V + M+D +LS+ + ++G
Sbjct: 121 ESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD----RNLSSWNSILSSYTKLGYVDDAIG 176
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L +M G +P VT+N ++ G+ + ++L M G P + + L+ A
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G + +++N + +T++ + G + AR VFD + A N
Sbjct: 237 EPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD----AKNIV 292
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+N+L+ G A + A L M +G+ PD +T+N L G+ G+
Sbjct: 293 AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK 341
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 53 LFRLLLRVGDYG---SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMP 109
+ R++L G G KLF +M + +FN ++ + + L +P
Sbjct: 125 VIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELP 184
Query: 110 -KFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNV 168
K G PD TYN +I A C KG + + KNG EP + +F+T++ R
Sbjct: 185 EKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELF 244
Query: 169 IEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
+E +++D ++ ++PN YN+ + G + ++ A L + M+ +G+SPD T+N L
Sbjct: 245 VEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNAL 304
Query: 229 VGGH 232
+ +
Sbjct: 305 ITAY 308
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 97/199 (48%), Gaps = 1/199 (0%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRD-VGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
N L+ ++N + EA+ + + +G+ P L + + L R G + +F+++
Sbjct: 160 FNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEEL 219
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ G P ++FN ++ F R++ V G+ + LM P+ +YN + K
Sbjct: 220 EKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKF 279
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ A++ +++M G P + T++ ++ A + N+ E K ++ +++ G+ P+T Y L
Sbjct: 280 TDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCML 339
Query: 194 MDGYVKAREIGQANMLYEE 212
+ K ++ +A + EE
Sbjct: 340 IPLLCKKGDLDRAVEVSEE 358
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
DF + L+ G+ GM A + M ++ ++ + L + K F
Sbjct: 123 DFVIRIMLLYGY--SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTF 180
Query: 71 KDMLRK-GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
K++ K G P VT+N MI CR+ + S+ + K G +PD ++N L+ +
Sbjct: 181 KELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEF-Y 239
Query: 130 KGKTSVAMDWL-NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ + V D + ++M P++ ++++ + L R +A + D ++ GI+P+
Sbjct: 240 RRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVH 299
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
YN L+ Y + + Y EM+ KG++PD VT+ +L+
Sbjct: 300 TYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLI 340
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI-QDMGIAP 185
Y G A + M + CE ++ +F+ ++ A + EA K F + + +GI P
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+ YNT++ + + ++EE+ G PD ++FN L+ Y+
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYR 240
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 1/202 (0%)
Query: 24 NVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSV 83
N G I A ++L + R + + + L R+ + L DM+ KGP P +
Sbjct: 349 NDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNA 408
Query: 84 TFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMM 143
FN+++ + L + +L LM G PD +TY ++I+ Y G A + L
Sbjct: 409 VFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEA 468
Query: 144 MKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY-VKARE 202
K + S T+ ++ C+ EA K+ + + G+ PN YN L+ + +KA +
Sbjct: 469 KKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALD 528
Query: 203 IGQANMLYEEMRGKGVSPDCVT 224
+A +L+EEM+ KG+ + ++
Sbjct: 529 WEKAEVLFEEMKQKGLHLNAIS 550
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 3/228 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
+ +LN L+ F +G A DV + + G P+ + L + +
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMP-KFGCDPDAFTYNILINAYCI 129
+ ML+ G +I FC++ S+ L K P F LI A C
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVAT-LITALCK 348
Query: 130 K-GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G + A + L + + FS ++H+LCR NV +A+ + + G AP
Sbjct: 349 NDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNA 408
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
++N ++ K ++ +A + + M +G+ PD T+ +++ G+ K G
Sbjct: 409 VFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGG 456
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
+V N ++ G + EA +VL M G++P + T++ + G ++ +
Sbjct: 408 AVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAE 467
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
+K + S VT++ +I G+C+ + LL+ M +FG P+A YN LI ++C+K
Sbjct: 468 AKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLK-- 525
Query: 133 TSVAMDW 139
A+DW
Sbjct: 526 ---ALDW 529
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
R+G +P F+ +I CR + + ++LL M G P +N++++A G
Sbjct: 369 RRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLD 424
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A + L +M G +P + T++ I+ + G + EA+++ + + Y+ L+
Sbjct: 425 EAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALI 484
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
GY K E +A L EM GV P+ +N L+
Sbjct: 485 RGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 6/234 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPS--LSAITILFRLLLRVGDYGSVWK 68
F ++ L+ G E L+ +M R + IL R +
Sbjct: 138 SFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARS 197
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+F + L P T N+++ GF + E H M K G P++ TY I I+ +C
Sbjct: 198 IF-EKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFC 256
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
K A+ M + + ++ +T++H N I+AR++FD I G+ P+
Sbjct: 257 KKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCG 316
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK---YGRNG 239
YN LM +K ++ A + +EM KG+ PD VTF+ + G K +G NG
Sbjct: 317 AYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNG 370
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 88/227 (38%), Gaps = 2/227 (0%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
H+ + D +N L+ GF G + H M G +P+ I + ++G
Sbjct: 203 HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFG 262
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+LF+DM R + +I G + + L + K G PD YN L+
Sbjct: 263 EALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALM 322
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL--CREGNVIEARKVFDRIQDMG 182
++ G S A+ + M + G EP TF ++ + +E + + ++++
Sbjct: 323 SSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERS 382
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ P T LM + E+ L++ M KG P +L
Sbjct: 383 LVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLT 429
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 155 FSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMR 214
F+ ++ A C E + EAR +F+++ P+ N L+ G+ +A ++ + Y EM
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 215 GKGVSPDCVTFNILVGGHYKYGRNGE 240
+G P+ VT+ I + G K GE
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGE 263
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
+++ +L TL+ G +A + + G+ P A L L++ GD
Sbjct: 275 DFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGA 334
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQ--GLVVGESLLHLMPKFGCDPDAFTYNILI 124
K+ K+M KG P SVTF+ M G + + G M + P T +L+
Sbjct: 335 IKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLM 394
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALC 163
+C G+ ++ +D M++ G P + ALC
Sbjct: 395 KLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALC 433
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Query: 24 NVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK-GPRPSS 82
GM +ALD M G + S+ + ++L D ++W+ D K G +
Sbjct: 118 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 177
Query: 83 VTFNVMICGFCRQQGLVVGESL-LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLN 141
V+FN+ I FC + G++ G + + M K G PD TY LI+A + + N
Sbjct: 178 VSFNIAIKSFC-ELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWN 236
Query: 142 MMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAR 201
+M+ GC+P++ TF+ + L +A + + + + P++ YN ++ G+ AR
Sbjct: 237 LMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLAR 296
Query: 202 EIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
A +Y M GKG P+ + ++ HY
Sbjct: 297 FPDMAERVYTAMHGKGYKPNLKIYQTMI--HY 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLR-----VGDYGS 65
D N ++ F +G++ A + M G+ P + T L L + +G+
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGN--G 233
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
+W L M+ KG +P+ TFNV I ++ LL LMPK +PD+ TYN++I
Sbjct: 234 LWNL---MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIK 290
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
+ + +A M G +P++ + T++H LC+ GN A + P
Sbjct: 291 GFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYP 350
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYE 211
N L+ G VK ++ QA + E
Sbjct: 351 NLDTVEMLLKGLVKKGQLDQAKSIME 376
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 33 DVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVT-------F 85
++ R+R+ SLS L L+ + + + ++++D+L +GP P++++ F
Sbjct: 367 ELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHF 426
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
N+++ ++ G LL+ M G P +N ++ A +T+ A+ M+
Sbjct: 427 NILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVD 486
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
NG +P++ ++ ++ AL + EA +V++ + +GI PN Y T+ ++
Sbjct: 487 NGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNL 546
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG---EW 241
+ L +EM KG+ P VTFN ++ G + G +G EW
Sbjct: 547 LDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEW 585
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 104/235 (44%), Gaps = 4/235 (1%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
N+ YE S N L+ G+ + +L++M D G++P + + +
Sbjct: 415 NNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASET 474
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGES--LLHLMPKFGCDPDAFTYN 121
+ ++FK M+ G +P+ +++ ++ ++G + E+ + + M K G +P+ + Y
Sbjct: 475 TAAIQIFKAMVDNGEKPTVISYGALLSAL--EKGKLYDEAFRVWNHMIKVGIEPNLYAYT 532
Query: 122 ILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
+ + + K ++ L M G EPS+ TF+ ++ R G A + F R++
Sbjct: 533 TMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSE 592
Query: 182 GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ PN Y L++ + A L+ + + +G+ ++ +V YG
Sbjct: 593 NVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYG 647
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EA V + M VG+ P+L A T + +L + + L K+M KG PS VTFN +I
Sbjct: 511 EAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVI 570
Query: 90 CGFCRQQGLV-VGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC 148
G C + GL V H M +P+ TY +LI A K +A + G
Sbjct: 571 SG-CARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGL 629
Query: 149 EPSMATFSTIMHALCREGNVIE 170
+ S + ++ + G I+
Sbjct: 630 KLSSKPYDAVVKSAETYGATID 651
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 3/204 (1%)
Query: 32 LDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICG 91
+DVL M GV P L +TI +RV +LF++ G + S+ +FN ++
Sbjct: 171 MDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRC 230
Query: 92 FCRQQGLVVGESLLHLMPKFGCDP-DAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
C + + +S+ + K G P D+ +YNI+I+ + G+ L M+++G P
Sbjct: 231 LCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGP 288
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLY 210
++S ++ L R G + ++ ++FD I+ G P+ +YN ++ ++ AR+ ++ Y
Sbjct: 289 DCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYY 348
Query: 211 EEMRGKGVSPDCVTFNILVGGHYK 234
M + P+ T++ LV G K
Sbjct: 349 RRMLDEECEPNLETYSKLVSGLIK 372
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 3/211 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D L M F+ V + A+++ GV+ S + L R L + +F
Sbjct: 185 DLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF 244
Query: 71 KDMLRKGPRP-SSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
+KG P S ++N+MI G+ + + E +L M + G PD +Y+ LI
Sbjct: 245 N--AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGR 302
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G+ + +++ + + G P ++ ++ + E+ + + R+ D PN
Sbjct: 303 TGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLET 362
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
Y+ L+ G +K R++ A ++EEM +GV P
Sbjct: 363 YSKLVSGLIKGRKVSDALEIFEEMLSRGVLP 393
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 90/216 (41%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N ++ G+ +G + E VL M + G P + + L L R G ++F ++
Sbjct: 259 NIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKH 318
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P + +N MIC F + M C+P+ TY+ L++ K S
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A++ M+ G P+ ++ + LC G A ++ + + G + + Y L+
Sbjct: 379 ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLK 438
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ + G +++EM+ G D + +V G
Sbjct: 439 RLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDG 474
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 6/226 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D +V N ++ F++ E++ RM D P+L + L L++ ++F
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 71 KDMLRKGPRPSS---VTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
++ML +G P++ +F +C + +V + K GC Y +L+
Sbjct: 384 EEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMV---IYQKSRKAGCRISESAYKLLLKRL 440
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
GK + ++ + M ++G + + I+ LC G++ A V + G PN
Sbjct: 441 SRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNR 500
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
+Y+ L + + + A L+ +++ + + +F G H+
Sbjct: 501 FVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSFWRSNGWHF 546
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 84 TFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMM 143
+++V++ R++ +L M G +PD I ++++ A++
Sbjct: 153 SYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEES 212
Query: 144 MKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREI 203
G + S +F+ ++ LC +V A+ VF+ + I ++ YN ++ G+ K E+
Sbjct: 213 ESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 204 GQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ + +EM G PDC++++ L+ G + GR
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGR 305
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 38/263 (14%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
S+ + G FEAL+VL M+D G+ S ++L R + KLFK+
Sbjct: 249 SIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKE 308
Query: 73 M-------------------LRKGPRPSSVTF------------NVMIC----GFCRQQG 97
+R+G +++ + ++C GF +Q+G
Sbjct: 309 AGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 98 LVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFST 157
+ K C+ TY I INAYC K + A + M+K G + + +S
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 158 IMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
IM + + +A ++ +++ G PN IYN+L+D + +A ++ +A +++EM+
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAK 488
Query: 218 VSPDCVTFNILVGGHYKYGRNGE 240
V PD V++ ++ Y R+ E
Sbjct: 489 VLPDKVSYTSMISA---YNRSKE 508
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 8/234 (3%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL++G+ I EA V RMR+ G+ P ++ L + V +LF
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 71 KDMLRKGPRPSSVTFNVMICGFCR----QQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
+ML G P ++N ++ + + + + +HL G P TYNIL++A
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLA---GLVPGIDTYNILLDA 163
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
C G T A++ + K+ +P + T++ +++ LC+ V + ++ G PN
Sbjct: 164 LCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPN 222
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y T++ Y K + I + L+ +M+ +G + D +V K GR E
Sbjct: 223 AVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEE 276
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 3/237 (1%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHR-MRDVGVRPSLSAITILFRLLLRVGDY 63
H+ D NTLM + +G EA +LH + G+ P + IL L + G
Sbjct: 111 HSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHT 170
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
+ +LFK L+ +P +T+N++I G C+ + + + ++ + K G P+A TY +
Sbjct: 171 DNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTM 229
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
+ Y + + M K G ++ AL + G EA + + G
Sbjct: 230 LKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGT 289
Query: 184 APNTTI-YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
+ YNTL++ Y K + + L EE+ KG+ PD T I+V G G G
Sbjct: 290 RSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTG 346
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 41 VGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVV 100
+GV P + L + R + + + M G P T+N +I G + L
Sbjct: 42 LGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNR 101
Query: 101 GESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK-NGCEPSMATFSTIM 159
L M G PD ++YN L++ Y G+ A L+ + G P + T++ ++
Sbjct: 102 VLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILL 161
Query: 160 HALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
ALC+ G+ A ++F ++ + P YN L++G K+R +G + + E++ G +
Sbjct: 162 DALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYT 220
Query: 220 PDCVTFNILVGGHYKYGR 237
P+ VT+ ++ ++K R
Sbjct: 221 PNAVTYTTMLKMYFKTKR 238
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L D +R G P +T+N +I G+ R G+ ++ M + G +PD TYN LI+
Sbjct: 35 LLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAA 94
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVF-DRIQDMGIAPNT 187
+ + + M+ +G P M +++T+M + G EA K+ + I G+ P
Sbjct: 95 KNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGI 154
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG--EW 241
YN L+D K+ A L++ ++ + V P+ +T+NIL+ G K R G +W
Sbjct: 155 DTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDW 209
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L K P S+ N+ + C+ + L E+LL + G PD TYN LI Y
Sbjct: 5 LMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGI 64
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A M + G EP + T+++++ + + ++FD + G++P+ YNTL
Sbjct: 65 DEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Query: 194 MDGYVKAREIGQA-NMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
M Y K G+A +L+E++ G+ P T+NIL+ K G
Sbjct: 125 MSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSG 168
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 65/120 (54%)
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
NI +N+ C A L ++ G P + T++T++ R + EA V R+++
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
GI P+ T YN+L+ G K + + L++EM G+SPD ++N L+ ++K GR+GE
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G A+++ ++ V+P L IL L + GSV + +++ +
Sbjct: 158 NILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P++VT+ M+ + + + + G L M K G D F +++A G+
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEE 276
Query: 136 AMDWLNMMMKNGCEPS-MATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A + ++ ++++G + +++T+++ ++GN+ + + I+ G+ P+ + ++
Sbjct: 277 AYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIV 336
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+G + G A + G+ P VT N L+ G K G
Sbjct: 337 NGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAG 378
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 5/181 (2%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPS-LSAITILFRLLLRVGDYGSVWKLFKDMLR 75
++ + G EA + +H + G R + + L L + G+ +V L +++
Sbjct: 263 AVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEM 322
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG +P T +++ G E L + + G P T N LI+ C G
Sbjct: 323 KGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDR 382
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
AM M T+++++H LC++G ++ A K+ + G+ ++ ++
Sbjct: 383 AMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLS 438
Query: 196 G 196
G
Sbjct: 439 G 439
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 113/272 (41%), Gaps = 34/272 (12%)
Query: 3 QNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD 62
+N + +D N +++ + + +AL + M++ G P LF++L V
Sbjct: 506 RNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDL 565
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
++ +ML G +P T+ MI + R L L M K G P+ Y
Sbjct: 566 VDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGS 625
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
LIN + G A+ + MM ++G + + ++++ A + G + EAR+V+D+++D
Sbjct: 626 LINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSE 685
Query: 183 IAPNTTIYNTLMD-----GYVKARE--------------IGQANMLY------------- 210
P+ N+++ G V E I A M+Y
Sbjct: 686 GGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIE 745
Query: 211 --EEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
EEMR G+ DC +FN ++ + G+ E
Sbjct: 746 VAEEMRESGLLSDCTSFNQVMACYAADGQLSE 777
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 81/200 (40%), Gaps = 7/200 (3%)
Query: 44 RPSL-SAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGE 102
+P L S L L + G LF +ML+ G +VTFN MI L E
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 103 SLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
SLL M + G PD TYNIL++ + G A+++ + K G P T ++H L
Sbjct: 361 SLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 163 CREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDC 222
C+ V E V + I + +M YV + QA L+E + DC
Sbjct: 421 CQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ-----LDC 475
Query: 223 VTFNILVGGHYK-YGRNGEW 241
V + + Y G W
Sbjct: 476 VLSSTTLAAVIDVYAEKGLW 495
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 1/219 (0%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLLRVGDYGSVWKLFK 71
+ L ++ + G+ EA V + R++ G R + ++ + + + LFK
Sbjct: 480 TTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFK 539
Query: 72 DMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKG 131
M +G P T+N + + + +L M GC P TY +I +Y G
Sbjct: 540 GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLG 599
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
S A+D M K G +P+ + ++++ G V EA + F +++ G+ N +
Sbjct: 600 LLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLT 659
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
+L+ Y K + +A +Y++M+ PD N ++
Sbjct: 660 SLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS 698
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 20/221 (9%)
Query: 24 NVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFK-----------D 72
G++ EAL + M P + + R+ G++ + FK D
Sbjct: 192 KAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLD 251
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVG-----ESLLHLMPKFGCDPD----AFTYNIL 123
+ P+ S V + F + VG E LH P T+N L
Sbjct: 252 SIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTL 311
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
I+ Y G+ + A + + M+K+G TF+T++H G++ EA + ++++ GI
Sbjct: 312 IDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGI 371
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVT 224
+P+T YN L+ + A +I A Y ++R G+ PD VT
Sbjct: 372 SPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVT 412
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 105/236 (44%), Gaps = 6/236 (2%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
+ N D + +M+ ++N G++ +A + R + V S + + + + G +
Sbjct: 437 DRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS-TTLAAVIDVYAEKGLW 495
Query: 64 GSVWKLF---KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
+F ++M G R + +NVMI + + + SL M G PD TY
Sbjct: 496 VEAETVFYGKRNM--SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTY 553
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
N L A L M+ +GC+P T++ ++ + R G + +A +++ ++
Sbjct: 554 NSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK 613
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
G+ PN +Y +L++G+ ++ + +A + M GV + + L+ + K G
Sbjct: 614 TGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVG 669
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 2/219 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NT++ G + EA +L +M + G+ P IL L GD + + +
Sbjct: 339 DTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYY 398
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ + + G P +VT ++ C+++ + E+++ M + D + +++ Y +
Sbjct: 399 RKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNE 458
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI- 189
G V L + C S T + ++ +G +EA VF ++M N +
Sbjct: 459 GLV-VQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLE 517
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
YN ++ Y KA+ +A L++ M+ +G PD T+N L
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSL 556
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 96/201 (47%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
E + +M+ ++P + + +L + R +F++ML G RP+ +N+++
Sbjct: 297 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
F + +++ M + PD ++Y +++AY A + + +G E
Sbjct: 357 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P++ T+ T++ + +V + +V+++++ GI N TI T+MD + + G A
Sbjct: 417 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 476
Query: 210 YEEMRGKGVSPDCVTFNILVG 230
Y+EM GV PD N+L+
Sbjct: 477 YKEMESCGVPPDQKAKNVLLS 497
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 11/231 (4%)
Query: 2 WQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVG 61
W N +E DF +L T N L VL +M G P++ + T L R G
Sbjct: 134 WWNFSEI--DFLMLITAYGKLGNFNGAERVLSVLSKM---GSTPNVISYTALMESYGRGG 188
Query: 62 DYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLM---PKFGCDPDAF 118
+ +F+ M GP PS++T+ +++ F E + + K PD
Sbjct: 189 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 248
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
Y+++I Y G A + M+ G S T++++M E + E K++D++
Sbjct: 249 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQM 305
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
Q I P+ Y L+ Y +AR +A ++EEM GV P +NIL+
Sbjct: 306 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
Y V K++ M R +P V++ ++I + R + S+ M G P YNI
Sbjct: 295 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 354
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
L++A+ I G A M ++ P + +++T++ A ++ A K F RI+ G
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 414
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
PN Y TL+ GY KA ++ + +YE+MR G+ + ++
Sbjct: 415 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 461
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 6/220 (2%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVG---VRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
+++ F+ EA +V + D ++P ++ + + G+Y K+F M+
Sbjct: 215 ILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV 274
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
KG S+VT+N ++ + + + M + PD +Y +LI AY +
Sbjct: 275 GKGVPQSTVTYNSLMSFETSYKEV---SKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 331
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A+ M+ G P+ ++ ++ A G V +A+ VF ++ I P+ Y T++
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
YV A ++ A ++ ++ G P+ VT+ L+ G+ K
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 88/185 (47%), Gaps = 6/185 (3%)
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
++G++ ++ + + G P+ +++ ++ + R E++ M G +P A
Sbjct: 151 KLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAI 210
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMM---KNGCEPSMATFSTIMHALCREGNVIEARKVF 175
TY I++ + K A + ++ K+ +P + +++ + GN +ARKVF
Sbjct: 211 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 270
Query: 176 DRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
+ G+ +T YN+LM +E+ + +Y++M+ + PD V++ +L+ + +
Sbjct: 271 SSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRA 327
Query: 236 GRNGE 240
R E
Sbjct: 328 RREEE 332
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Query: 81 SSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL 140
S + F ++I + + E +L ++ K G P+ +Y L+ +Y GK + A
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 141 NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG---IAPNTTIYNTLMDGY 197
M +G EPS T+ I+ EA +VF+ + D + P+ +Y+ ++ Y
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
KA +A ++ M GKGV VT+N L+ Y
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY 295
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 68/180 (37%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EAL V M D GVRP+ A IL G +FK M R P ++ M+
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
+ + E + G +P+ TY LI Y M+ M +G +
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
+ +TIM A R N A + ++ G+ P+ N L+ E+ +A L
Sbjct: 452 ANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 96/201 (47%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
E + +M+ ++P + + +L + R +F++ML G RP+ +N+++
Sbjct: 304 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
F + +++ M + PD ++Y +++AY A + + +G E
Sbjct: 364 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 423
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P++ T+ T++ + +V + +V+++++ GI N TI T+MD + + G A
Sbjct: 424 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 483
Query: 210 YEEMRGKGVSPDCVTFNILVG 230
Y+EM GV PD N+L+
Sbjct: 484 YKEMESCGVPPDQKAKNVLLS 504
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 11/231 (4%)
Query: 2 WQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVG 61
W N +E DF +L T N L VL +M G P++ + T L R G
Sbjct: 141 WWNFSEI--DFLMLITAYGKLGNFNGAERVLSVLSKM---GSTPNVISYTALMESYGRGG 195
Query: 62 DYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLM---PKFGCDPDAF 118
+ +F+ M GP PS++T+ +++ F E + + K PD
Sbjct: 196 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 255
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
Y+++I Y G A + M+ G S T++++M E + E K++D++
Sbjct: 256 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQM 312
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
Q I P+ Y L+ Y +AR +A ++EEM GV P +NIL+
Sbjct: 313 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
Y V K++ M R +P V++ ++I + R + S+ M G P YNI
Sbjct: 302 YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNI 361
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
L++A+ I G A M ++ P + +++T++ A ++ A K F RI+ G
Sbjct: 362 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 421
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
PN Y TL+ GY KA ++ + +YE+MR G+ +
Sbjct: 422 FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 460
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 6/220 (2%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVG---VRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
+++ F+ EA +V + D ++P ++ + + G+Y K+F M+
Sbjct: 222 ILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV 281
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
KG S+VT+N ++ + + + M + PD +Y +LI AY +
Sbjct: 282 GKGVPQSTVTYNSLMSFETSYKEV---SKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 338
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A+ M+ G P+ ++ ++ A G V +A+ VF ++ I P+ Y T++
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
YV A ++ A ++ ++ G P+ VT+ L+ G+ K
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 438
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 88/185 (47%), Gaps = 6/185 (3%)
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
++G++ ++ + + G P+ +++ ++ + R E++ M G +P A
Sbjct: 158 KLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAI 217
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMM---KNGCEPSMATFSTIMHALCREGNVIEARKVF 175
TY I++ + K A + ++ K+ +P + +++ + GN +ARKVF
Sbjct: 218 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 277
Query: 176 DRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
+ G+ +T YN+LM +E+ + +Y++M+ + PD V++ +L+ + +
Sbjct: 278 SSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRA 334
Query: 236 GRNGE 240
R E
Sbjct: 335 RREEE 339
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Query: 81 SSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL 140
S + F ++I + + E +L ++ K G P+ +Y L+ +Y GK + A
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 141 NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG---IAPNTTIYNTLMDGY 197
M +G EPS T+ I+ EA +VF+ + D + P+ +Y+ ++ Y
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
KA +A ++ M GKGV VT+N L+ Y
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY 302
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 68/180 (37%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EAL V M D GVRP+ A IL G +FK M R P ++ M+
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE 149
+ + E + G +P+ TY LI Y M+ M +G +
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 458
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
+ +TIM A R N A + ++ G+ P+ N L+ E+ +A L
Sbjct: 459 ANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 3/202 (1%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
E E +F V N ++ G G + EAL ++ R P++ L + + GD
Sbjct: 315 EMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGA 374
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
K+ K M+ +G P++ T+N F + G +L + + G PD TY++++
Sbjct: 375 SKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKM 434
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
C GK S+AM M G +P + T + ++H LCR + EA + FD GI P
Sbjct: 435 LCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQ 494
Query: 187 TTIYNTLMDGYVKAREIGQANM 208
+ + +G R G ++M
Sbjct: 495 YITFKMIDNGL---RSKGMSDM 513
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 3/223 (1%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRM---RDVGVRPSLSAITILFRLLLRVGDYGSV 66
++ +L L+ G + EA L R+ D PS+ IL R
Sbjct: 210 TELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQA 269
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
KL+++M +P+ VT+ +I G+CR + + + +L M + + +N +I+
Sbjct: 270 EKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDG 329
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
G+ S A+ + P++ T+++++ C+ G++ A K+ + G+ P
Sbjct: 330 LGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPT 389
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
TT YN + K + + LY ++ G SPD +T+++++
Sbjct: 390 TTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLIL 432
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 91/220 (41%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
TL+ G+ + + A++VL M+ + + + L G + +
Sbjct: 290 TLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVC 349
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
P+ VT+N ++ FC+ L +L +M G DP TYN + KT
Sbjct: 350 ESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEG 409
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
M+ +++ G P T+ I+ LC +G + A +V +++ GI P+ L+
Sbjct: 410 MNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHL 469
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ + +A ++ +G+ P +TF ++ G G
Sbjct: 470 LCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 10/194 (5%)
Query: 57 LLRVGDYGSVWKLFKDMLRKGPRP---SSVTFNVMICGFCR----QQGLVVGESLLHLMP 109
L + ++ W L D +R S+ TF V+I + R QQ + E P
Sbjct: 145 LCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEP 204
Query: 110 KFGCDPDAFTYNILINAYCIKG---KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREG 166
+ +L++A C +G + S+ ++ + M + PS+ F+ +++ R
Sbjct: 205 VCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSR 264
Query: 167 NVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFN 226
+ +A K+++ ++ M + P Y TL++GY + R + A + EEM+ + + + FN
Sbjct: 265 KLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFN 324
Query: 227 ILVGGHYKYGRNGE 240
++ G + GR E
Sbjct: 325 PIIDGLGEAGRLSE 338
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 56 LLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGF-CRQQGLVVGESL--LHLMPKFG 112
LL + D+ +W + + R+ + VT + C C + V E+L + M ++
Sbjct: 136 LLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYH 195
Query: 113 CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCE--PSMATFSTIMHALCREG---- 166
C PD + YN +INA C G A L+ M G P T++ ++ + CR G
Sbjct: 196 CKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTG 255
Query: 167 -------NVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
+ EA ++F + G P+ YN L+DG K IG+A L+E+M+ KG
Sbjct: 256 CRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCV 315
Query: 220 PDCVTFNILV 229
P+ VT+N +
Sbjct: 316 PNQVTYNSFI 325
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 14/228 (6%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
+ LM+ G + EAL +RM++ +P + A + L RVG++ L M
Sbjct: 168 ITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQ 227
Query: 75 RKGPR--PSSVTFNVMICGFCR-----------QQGLVVGESLLHLMPKFGCDPDAFTYN 121
G R P + T+ ++I +CR ++ + + M G PD TYN
Sbjct: 228 LPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYN 287
Query: 122 ILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
LI+ C + A++ M GC P+ T+++ + + A ++ ++ +
Sbjct: 288 CLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKL 347
Query: 182 GI-APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
G P ++ Y L+ V+ R +A L EM G+ P T+ ++
Sbjct: 348 GHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 17/222 (7%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVR--PSLSAITILFRLLLRVGDYG-- 64
+ D NT++ VG +A +L +M+ G R P TIL R G
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 65 ------SVW---KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDP 115
+W ++F++ML +G P VT+N +I G C+ + L M GC P
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 116 DAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC-EPSMATFSTIMHALCREGNVIEARKV 174
+ TYN I Y + + A++ + M K G P +T++ ++HAL EAR +
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDL 376
Query: 175 FDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
+ + G+ P Y + D G A+ L EE+ +
Sbjct: 377 VVEMVEAGLVPREYTYKLVCDALSSE---GLASTLDEELHKR 415
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 16/210 (7%)
Query: 46 SLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLL 105
+ ++IT L + L G F M +P +N +I CR LL
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 106 HLM--PKFGCDPDAFTYNILINAYC-----------IKGKTSVAMDWLNMMMKNGCEPSM 152
M P F PD +TY ILI++YC I+ + A M+ G P +
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
T++ ++ C+ + A ++F+ ++ G PN YN+ + Y EI A +
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRT 343
Query: 213 MR--GKGVSPDCVTFNILVGGHYKYGRNGE 240
M+ G GV P T+ L+ + R E
Sbjct: 344 MKKLGHGV-PGSSTYTPLIHALVETRRAAE 372
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V + L++ + + + DV R+ D G S+ + L + VW++++
Sbjct: 166 VFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECA 225
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ K P+ +T +MI C++ L LL + C P L+ + +
Sbjct: 226 IDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRI 285
Query: 134 SVAMDWLN-MMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
+M L ++MKN ++ +S +++A +EG+++ ARKVFD + G + N+ +Y
Sbjct: 286 EESMSLLKRLLMKNMVVDTIG-YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTV 344
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ + ++ +A L EM GVSP TFN L+GG ++G
Sbjct: 345 FVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFG 388
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%)
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
GD S K+F +ML++G +S + V + C + + E LL M + G P T+
Sbjct: 318 GDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETF 377
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
N LI + G +++ +M+ G PS + F+ ++ ++ + NV A ++ + D
Sbjct: 378 NCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSID 437
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
G P+ Y+ L+ G+++ +I QA L+ EM + +SP F L+ G
Sbjct: 438 KGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVG 488
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 75/200 (37%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V +R G + EA +L M + GV P L R G + + M
Sbjct: 341 VYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVM 400
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ +G PS FN M+ + + + +L G PD TY+ LI +
Sbjct: 401 VTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDI 460
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
A+ M P F +++ LC G V K ++ I PN IY+ L
Sbjct: 461 DQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDAL 520
Query: 194 MDGYVKAREIGQANMLYEEM 213
+ + K + A+ +Y EM
Sbjct: 521 IKAFQKIGDKTNADRVYNEM 540
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N LM FLN G+ ++A ++ M S ++ L + G + +KLF
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ M + RPS F+ ++ + L + M FG P A + LI++Y
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK A+ + M K+G P+ ++ I+ + + G + A VF ++ G P + Y
Sbjct: 397 GKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
+ L++ + + ++ A +Y M G+ P ++
Sbjct: 457 SCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D S ++ G + A + +M++ +RPS S + L + + G + K++
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M G RPS+ F +I + + L L M K G P+ Y ++I ++
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 431
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK VAM M K G P+ +T+S ++ G V A K+++ + + G+ P + Y
Sbjct: 432 GKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+L+ R + A + EM+ G S D ++L+
Sbjct: 492 ISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM 530
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 98/220 (44%), Gaps = 7/220 (3%)
Query: 20 RGFLNVGMIFEALDVLHRMRDVGVRPSLS--AITILFRLLLRVGDYGSVWKLFKDMLRKG 77
R F+ + +FE + ++D LS A + + L + + FK G
Sbjct: 219 RDFVGIQSLFEEM-----VQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESG 273
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+ + T+N ++ F + + M K D TY ++I + G+ A
Sbjct: 274 CKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAF 333
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
M + PS + FS+++ ++ + G + + KV+ +Q G P+ T++ +L+D Y
Sbjct: 334 KLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSY 393
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
KA ++ A L++EM+ G P+ + +++ H K G+
Sbjct: 394 AKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
Query: 45 PSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNV---MICGFCRQQGLVVG 101
PS +LF L + D+ + LF++M++ ++FN +I + + L V
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVA 262
Query: 102 ESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHA 161
+ GC D TYN L+ + KG A + M K +T+ I+ +
Sbjct: 263 FCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPS 322
Query: 162 LCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
L + G + A K+F ++++ + P+ +++++L+D KA + + +Y EM+G G P
Sbjct: 323 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 222 CVTFNILVGGHYKYGR 237
F L+ + K G+
Sbjct: 383 ATMFVSLIDSYAKAGK 398
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
S+ + N ++RG+ +G + + +M GV L + +I ++ + G KL
Sbjct: 187 SNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKL 246
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
+K+M + + V +N +I QG+ G + M + GC+P+ T+N +I C
Sbjct: 247 YKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCE 306
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
G+ A L+ M K GC+P T+ + L + ++ +F R+ G+ P
Sbjct: 307 DGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEIL---SLFGRMIRSGVRPKMDT 363
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
Y LM + + + +++ M+ G +PD +N ++ + G
Sbjct: 364 YVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKG 410
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 2/218 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N ++ G G A +L + PS +L L + D G + + MLR
Sbjct: 346 NAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLR 405
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
K + +N+ + G C ++L M + C PD +T N +IN C G+
Sbjct: 406 KEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDD 465
Query: 136 AMDWLNMMMKNG-CEPSMATFSTIMHALCREGNVIEARKVFDRIQ-DMGIAPNTTIYNTL 193
AM L+ MM C P T +T+M L +G EA V +R+ + I P YN +
Sbjct: 466 AMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAV 525
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ G K + +A ++ ++ V+ D T+ I++ G
Sbjct: 526 IRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDG 563
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 4/225 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMR--DVGVRPSLSAITILFRLLLRVGDYGSVWK 68
D LNT++ G +G + +A+ VL M +++ T++ LL + ++
Sbjct: 446 DEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV 505
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L + M +P V +N +I G + S+ + K D+ TY I+I+ C
Sbjct: 506 LNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLC 565
Query: 129 IKGKTSVAMD-WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
+ K +A W +++ +G + ++ + LC+ G + +A + D G PN
Sbjct: 566 VTNKVDMAKKFWDDVIWPSGRHDAF-VYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNV 624
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
YNT++ ++ +A + EEMR G +PD VT+ IL H
Sbjct: 625 VCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLH 669
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+G RP S+ + +I C L G PD T N++I
Sbjct: 84 RGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVS 143
Query: 136 AMDWLNMMM--KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
+ ++ ++ K PS+ ++ +M+ LC VI+A K+ +++ G P+ + TL
Sbjct: 144 TLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTL 203
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
+ GY + RE+ A+ +++EMR G+ P+ +T ++L+GG K
Sbjct: 204 IGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLK 244
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
M KG +P ++N +I G C+ G + LL +F P +TY +L+ + C +
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
T A + L +M++ ++ + LC N E V + P+ NT
Sbjct: 393 TGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT 452
Query: 193 LMDGYVKAREIGQA-NMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+++G K + A +L + M GK +PD VT N ++ G GR E
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEE 501
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 2/186 (1%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EAL +L + G RP ++ + L G + + F L G P T NV+I
Sbjct: 73 EALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVII 132
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCD--PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG 147
+ V ++H + F + P YN L+N C + A + M G
Sbjct: 133 ARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRG 192
Query: 148 CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQAN 207
P + TF+T++ C + A KVFD ++ GI PN+ + L+ G++K R++
Sbjct: 193 HLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGR 252
Query: 208 MLYEEM 213
L +E+
Sbjct: 253 KLMKEL 258
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 103/266 (38%), Gaps = 40/266 (15%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
E+ + N LM + + +A ++ MR+ G P + T L + +
Sbjct: 156 KEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEV 215
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLM--------------PKF 111
K+F +M G RP+S+T +V+I GF + + + G L+ + F
Sbjct: 216 AHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAF 275
Query: 112 GCDPDA--------------------------FTYNILINAYCIKGKTSVAMDWLNMMMK 145
D+ F Y +I++ C + A + +M
Sbjct: 276 ANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKS 335
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
G +P +++ I+H LC++G + A ++ + + P+ Y LM+ K + G+
Sbjct: 336 KGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGK 395
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGG 231
A + E M K + +NI + G
Sbjct: 396 ARNVLELMLRKEGADRTRIYNIYLRG 421
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 3/230 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D +TL+ F GM AL L +M V L + L L R+ DY +F
Sbjct: 189 DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIF 248
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ R G P V +N MI + + + L+ M + G P+ +Y+ L++ Y
Sbjct: 249 SRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVEN 308
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K A+ M + C + T + ++ + V EA ++F ++ M I PN Y
Sbjct: 309 HKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY 368
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
NT++ Y +A G+A L+ M+ K + + VT+N ++ YG+ E
Sbjct: 369 NTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI---YGKTME 415
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 49 AITILFRLLLRVGDYGSVWKLFKDMLRKGPR--PSSVTFNVMICGFCRQQGLVVGESLLH 106
+I + LL R D+ L D + + + PS +NV++ R + + L
Sbjct: 121 SIRFMVSLLSRENDWQRSLALL-DWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFD 179
Query: 107 LMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREG 166
M + PD +TY+ LI ++ +G A+ WL M ++ + +S ++ R
Sbjct: 180 EMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC 239
Query: 167 NVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFN 226
+ +A +F R++ GI P+ YN++++ Y KA+ +A +L +EM GV P+ V+++
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 299
Query: 227 ILVG 230
L+
Sbjct: 300 TLLS 303
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+++ + + EA ++ M + GV P+ + + L + + + +F
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF 318
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M T N+MI + + + + L + K +P+ +YN ++ Y
Sbjct: 319 AEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEA 378
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM---GIAPNT 187
A+ +M + E ++ T++T++ G +E K + +Q+M GI PN
Sbjct: 379 ELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIY---GKTMEHEKATNLVQEMQSRGIEPNA 435
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
Y+T++ + KA ++ +A L++++R GV D V + ++ + + G G
Sbjct: 436 ITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMG 487
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 4/225 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+TL+ ++ EAL V M++V L+ I+ + ++ +LF + +
Sbjct: 299 STLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 358
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
P+ V++N ++ + + L LM + + + TYN +I Y +
Sbjct: 359 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEK 418
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + + M G EP+ T+STI+ + G + A +F +++ G+ + +Y T++
Sbjct: 419 ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIV 478
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
Y + +G A L E++ P IL K GR E
Sbjct: 479 AYERVGLMGHAKRLLHELKLPDNIPRETAITILA----KAGRTEE 519
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 95/221 (42%), Gaps = 5/221 (2%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E + NT+++ + +A +++ M+ G+ P+ + + + + G
Sbjct: 397 EQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAAT 456
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF+ + G V + MI + R + + LLH + PD I
Sbjct: 457 LFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL----PDNIPRETAITILA 512
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G+T A ++G ++ F +++ R + +VF++++ G P++
Sbjct: 513 KAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 572
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKG-VSPDCVTFNIL 228
+ +++ Y K RE +A+ +Y EM+ +G V PD V F +L
Sbjct: 573 VIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 106/263 (40%), Gaps = 34/263 (12%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + N ++ + + M+ EA + +R + + P++ + + R+ +G LF
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ M RK + VT+N MI + + +L+ M G +P+A TY+ +I+ +
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIM----------HA------------------- 161
GK A + +G E + T++ HA
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 508
Query: 162 --LCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
L + G EA VF + + G + +++ +++ Y + + ++E+MR G
Sbjct: 509 TILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYF 568
Query: 220 PDCVTFNILVGGHYKYGRNGEWN 242
PD +++ YG+ E+
Sbjct: 569 PDSNVIAMVLNA---YGKQREFE 588
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 3/233 (1%)
Query: 2 WQNHNEYESDFSV--LNTLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLL 58
++N +YE +V LN L+ L EA V M + G+ P L + R+L
Sbjct: 134 FRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLC 193
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
G S + + +M RK +P++ +F +MI GF +++ ++ +M +FG
Sbjct: 194 ESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVA 253
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
TYNI+I C + K++ A ++ +M P+ T+S ++H C E N+ EA +F+ +
Sbjct: 254 TYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVM 313
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
G P++ Y TL+ K + A +L E K P LV G
Sbjct: 314 VCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNG 366
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 94/208 (45%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D N ++R G + ++ M ++P+ ++ ++ + + V K
Sbjct: 179 EPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRK 238
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ + M G T+N+MI C+++ ++L+ + P++ TY++LI+ +C
Sbjct: 239 VMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFC 298
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ AM+ +M+ NG +P + T++H LC+ G+ A + + P+ +
Sbjct: 299 SEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFS 358
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGK 216
+ L++G ++ +A L ++ K
Sbjct: 359 VMKWLVNGLASRSKVDEAKELIAVVKEK 386
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N +M + GMI E VL RMR +P + +L + ++ + + F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K ++R +P+ TFN MI + + + + E + M P TY +I Y
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G S A + + ++ +T + ++ CR G IEA K+F + P+ + Y
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
L Y KA Q +L ++M G+ P+
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 8/234 (3%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALD----VLHRMRDVG-VRPSLSAITILFRLLLRVGDYGS 65
D SV N L+ L+ +AL+ L +M+ + +P++ IL R + G
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ 226
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
V LFKD+ P TFN ++ + + + E++L M C PD T+N+LI+
Sbjct: 227 VNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLID 286
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
+Y K + +M++ +P++ TF++++ + + +A VF ++ DM P
Sbjct: 287 SYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIP 346
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
+ Y ++ Y + +A ++EE+ G S + + L Y RNG
Sbjct: 347 SFITYECMIMMYGYCGSVSRAREIFEEV---GESDRVLKASTLNAMLEVYCRNG 397
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 104 LLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD----WLNMMMK-NGCEPSMATFSTI 158
L M GC PDA YN LI A+ + A++ +L+ M C+P++ T++ +
Sbjct: 155 LFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNIL 214
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ A + G V + +F + ++P+ +N +MD Y K I + + MR
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 219 SPDCVTFNILVGGHYKYGRNGEW 241
PD +TFN+L+ YG+ E+
Sbjct: 275 KPDIITFNVLIDS---YGKKQEF 294
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 96/232 (41%), Gaps = 5/232 (2%)
Query: 3 QNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD 62
Q Y D V + L+ G A+ + M++ G RP S L L D
Sbjct: 124 QKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRD 183
Query: 63 YGSVWKLFKDMLRKGP-----RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDA 117
+ + L K +P+ VT+N+++ F + + +L + PD
Sbjct: 184 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDV 243
Query: 118 FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR 177
+T+N +++AY G L M N C+P + TF+ ++ + ++ + + F
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ P +N+++ Y KAR I +A ++++M P +T+ ++
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N +M + GMI E VL RMR +P + +L + ++ + + F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K ++R +P+ TFN MI + + + + E + M P TY +I Y
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G S A + + ++ +T + ++ CR G IEA K+F + P+ + Y
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
L Y KA Q +L ++M G+ P+
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 8/234 (3%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALD----VLHRMRDVG-VRPSLSAITILFRLLLRVGDYGS 65
D SV N L+ L+ +AL+ L +M+ + +P++ IL R + G
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ 226
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
V LFKD+ P TFN ++ + + + E++L M C PD T+N+LI+
Sbjct: 227 VNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLID 286
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
+Y K + +M++ +P++ TF++++ + + +A VF ++ DM P
Sbjct: 287 SYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIP 346
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
+ Y ++ Y + +A ++EE+ G S + + L Y RNG
Sbjct: 347 SFITYECMIMMYGYCGSVSRAREIFEEV---GESDRVLKASTLNAMLEVYCRNG 397
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 104 LLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD----WLNMMMK-NGCEPSMATFSTI 158
L M GC PDA YN LI A+ + A++ +L+ M C+P++ T++ +
Sbjct: 155 LFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNIL 214
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
+ A + G V + +F + ++P+ +N +MD Y K I + + MR
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 219 SPDCVTFNILVGGHYKYGRNGEWN 242
PD +TFN+L+ YG+ E+
Sbjct: 275 KPDIITFNVLIDS---YGKKQEFE 295
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 96/232 (41%), Gaps = 5/232 (2%)
Query: 3 QNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD 62
Q Y D V + L+ G A+ + M++ G RP S L L D
Sbjct: 124 QKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRD 183
Query: 63 YGSVWKLFKDMLRKGP-----RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDA 117
+ + L K +P+ VT+N+++ F + + +L + PD
Sbjct: 184 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDV 243
Query: 118 FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR 177
+T+N +++AY G L M N C+P + TF+ ++ + ++ + + F
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ P +N+++ Y KAR I +A ++++M P +T+ ++
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 2/200 (1%)
Query: 42 GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGF-CRQQGLVV 100
G+ P L + ++ G S + + +M RKG +P+S +F +MI GF + V
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 101 GESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
G+ +L +M G + TYNI I + C + K+ A L+ M+ G +P+ T+S ++H
Sbjct: 242 GK-VLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIH 300
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
C E + EA+K+F + + G P++ Y TL+ K + A L +E K P
Sbjct: 301 GFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Query: 221 DCVTFNILVGGHYKYGRNGE 240
LV G K + E
Sbjct: 361 SFSIMKSLVNGLAKDSKVEE 380
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 22 FLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK-GPRP 80
+ M+ +L V + + ++ ++ L L DY +++ +M + G P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 81 SSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWL 140
T+N MI FC S++ M + G P++ ++ ++I+ + + K+ L
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 141 NMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKA 200
MM G ++T++ + +LC+ EA+ + D + G+ PNT Y+ L+ G+
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 201 REIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ +A L++ M +G PD + L+
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLI 334
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 93/208 (44%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D N +++ F G + ++ M G++P+ S+ ++ V K
Sbjct: 184 EPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGK 243
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ M +G T+N+ I C+++ ++LL M G P+ TY+ LI+ +C
Sbjct: 244 VLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 303
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+ A +M+ GC+P + T+++ LC+ G+ A + + P+ +
Sbjct: 304 NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFS 363
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGK 216
I +L++G K ++ +A L +++ K
Sbjct: 364 IMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 108 MPK-FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREG 166
MPK +G +PD TYN +I +C G S + + M + G +P+ ++F ++ E
Sbjct: 177 MPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAED 236
Query: 167 NVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFN 226
E KV ++D G+ + YN + K ++ +A L + M G+ P+ VT++
Sbjct: 237 KSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYS 296
Query: 227 ILVGG 231
L+ G
Sbjct: 297 HLIHG 301
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 14 VLNT---LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
LNT +MR F G EA+ + R+ + G+ + ++ +L L + ++
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVV 212
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
L+ P++ TFN+ I G+C+ + + M G P +Y +I YC +
Sbjct: 213 LLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ + L+ M NG P+ T++TIM +L + EA +V R++ G P++ Y
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 191 NTLMDGYVKAREIGQANMLYE-EMRGKGVSPDCVTFNILVG 230
N L+ +A + +A ++ EM GVS + T+N ++
Sbjct: 333 NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 91/195 (46%), Gaps = 1/195 (0%)
Query: 46 SLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLL 105
+L+ + + R G++ +F + G ++ + N+++ C+++ + +L
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 106 HLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCRE 165
L K P+A T+NI I+ +C + A+ + M +G P + +++TI+ C++
Sbjct: 214 -LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 166 GNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
I+ ++ ++ G PN+ Y T+M +E +A + M+ G PD + +
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 226 NILVGGHYKYGRNGE 240
N L+ + GR E
Sbjct: 333 NCLIHTLARAGRLEE 347
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 98/245 (40%), Gaps = 38/245 (15%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
N + G+ + EAL + M+ G RP + + T + R + ++ V+++ +M
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF--------------- 118
G P+S+T+ ++ Q+ + M + GC PD+
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 119 ---------------------TYNILINAYCIKGKTSVAMDWL-NMMMKNGCEPSMATFS 156
TYN +I YC + A++ L M N C P + T+
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 157 TIMHALCREGNVIEARKVF-DRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
++ + + G+V+E K+ + + ++ + + Y L+ +A A L+EEM
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 216 KGVSP 220
+ ++P
Sbjct: 466 QDITP 470
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 14 VLNT---LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
LNT +MR F G EA+ + R+ + G+ + ++ +L L + ++
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVV 212
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
L+ P++ TFN+ I G+C+ + + M G P +Y +I YC +
Sbjct: 213 LLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ + L+ M NG P+ T++TIM +L + EA +V R++ G P++ Y
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 191 NTLMDGYVKAREIGQANMLYE-EMRGKGVSPDCVTFNILVG 230
N L+ +A + +A ++ EM GVS + T+N ++
Sbjct: 333 NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 91/195 (46%), Gaps = 1/195 (0%)
Query: 46 SLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLL 105
+L+ + + R G++ +F + G ++ + N+++ C+++ + +L
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 106 HLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCRE 165
L K P+A T+NI I+ +C + A+ + M +G P + +++TI+ C++
Sbjct: 214 -LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 166 GNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
I+ ++ ++ G PN+ Y T+M +E +A + M+ G PD + +
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 226 NILVGGHYKYGRNGE 240
N L+ + GR E
Sbjct: 333 NCLIHTLARAGRLEE 347
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 98/245 (40%), Gaps = 38/245 (15%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
N + G+ + EAL + M+ G RP + + T + R + ++ V+++ +M
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF--------------- 118
G P+S+T+ ++ Q+ + M + GC PD+
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 119 ---------------------TYNILINAYCIKGKTSVAMDWL-NMMMKNGCEPSMATFS 156
TYN +I YC + A++ L M N C P + T+
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 157 TIMHALCREGNVIEARKVF-DRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRG 215
++ + + G+V+E K+ + + ++ + + Y L+ +A A L+EEM
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 216 KGVSP 220
+ ++P
Sbjct: 466 QDITP 470
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 112/235 (47%), Gaps = 2/235 (0%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
+E++ + V NT++ G + A H M + GVRP+++ I +L L + +
Sbjct: 204 HEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEE 263
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
F M + G S ++ MI + R + E ++ LM + + +++N
Sbjct: 264 AEFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLN 322
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
AY +GK +A L M G P++ ++T++ + + A+ +F R+ ++G+ P
Sbjct: 323 AYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEP 382
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG-RNG 239
+ T Y ++++G+ +A +A Y+E++ G P+ L+ KYG R+G
Sbjct: 383 DETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDG 437
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 32 LDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSV---TFNVM 88
LD L + +R + T+ F +LL V ++K ++ R V ++N +
Sbjct: 680 LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTI 739
Query: 89 ICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC 148
I + + + S + M G YN L++AY + L M K+
Sbjct: 740 IAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTS 799
Query: 149 EPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANM 208
P T++ +++ +G + E V +++ G+ P+ YNTL+ Y + +A
Sbjct: 800 GPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVG 859
Query: 209 LYEEMRGKGVSPDCVTFNILV 229
L +EMRG+ + PD VT+ LV
Sbjct: 860 LVKEMRGRNIIPDKVTYTNLV 880
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 100/229 (43%), Gaps = 11/229 (4%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD----YGSVWKLF 70
+ ++R ++ G + EA VL M + + + LFR +LR+ + L+
Sbjct: 596 FSIVVRMYVKAGSLEEACSVLEIMDE---QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLY 652
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ + G + +N +I R L M ++G P+ T+N+L++ Y K
Sbjct: 653 YRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYG-K 711
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K ++ L ++ K + +++TI+ A + + +Q G + + Y
Sbjct: 712 AKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAY 771
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
NTL+D Y K +++ + + + M+ PD T+NI++ YG G
Sbjct: 772 NTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN---IYGEQG 817
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/217 (17%), Positives = 94/217 (43%), Gaps = 5/217 (2%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G + +A+ + + + +L + + + +G++ KL+ ++ G + F
Sbjct: 537 GQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGF 596
Query: 86 NVMICGFCRQQGLVVGESLLHLM-PKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMM 144
++++ + + L S+L +M + PD + + ++ Y +
Sbjct: 597 SIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIR 656
Query: 145 KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIG 204
K+G + ++ +++ R + E F+ + G PNT +N L+D Y KA+
Sbjct: 657 KSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFK 716
Query: 205 QANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEW 241
+ N L+ + GV D +++N ++ YG+N ++
Sbjct: 717 KVNELFLLAKRHGV-VDVISYNTIIAA---YGKNKDY 749
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
+ M+ G SL A L + + K M + P T+N+MI +
Sbjct: 755 AIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYG 814
Query: 94 RQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMA 153
Q + +L + + G PD +YN LI AY I G A+ + M P
Sbjct: 815 EQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKV 874
Query: 154 TFSTIMHALCREGNVIEARKVFDRIQDMGI 183
T++ ++ AL R +EA K ++ MGI
Sbjct: 875 TYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N L+ G+ +G A+D++ +M G+ + T + L+ G +F+ M
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G P++VT + + + G + + K G D N L++ Y GK
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + + KN + T+++++ C+ G +A ++F R+QD + PN +NT++
Sbjct: 406 ARKVFDSV-KN---KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 196 GYVKAREIGQANMLYEEMRGKG-VSPDCVTFNILVGGHYKYGRNGE 240
GY+K + G+A L++ M G V + T+N+++ G+ + G+ E
Sbjct: 462 GYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 101/224 (45%), Gaps = 7/224 (3%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+++ G+ G +A ++ RM+D +RP++ + ++ GD G LF
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 71 KDMLRKGP-RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
+ M + G + ++ T+N++I G+ + L M P++ T L+ A
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
+ + +++ + A + + + G++ +R +F +G+ I
Sbjct: 537 LLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIF-----LGMETKDII 591
Query: 190 -YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+N+L+ GYV G A L+ +M+ +G++P+ T + ++ H
Sbjct: 592 TWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAH 635
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 6/221 (2%)
Query: 18 LMRGFLNVGMIFEALDVLHRMR-DVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
+++G N G + EA V+H + +G+ L + + + G+ K F+ M +
Sbjct: 187 ILQGCANCGDV-EAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER 245
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
+ +N ++ +C+ L+ M K G P T+NILI Y GK A
Sbjct: 246 ----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA 301
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
MD + M G + T++ ++ L G +A +F ++ G+ PN + +
Sbjct: 302 MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA 361
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ I Q + ++ G D + N LV + K G+
Sbjct: 362 CSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRM-RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
NT++ G++ G EA+D+ RM +D V+ + + ++ ++ G +LF+ M
Sbjct: 457 NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Query: 75 RKGPRPSSVTF--------NVMICGFCRQ-QGLVVGESL--LHLMPKFGCD--------- 114
P+SVT N++ R+ G V+ +L +H + D
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE 576
Query: 115 -----------PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALC 163
D T+N LI Y + G A+ N M G P+ T S+I+ A
Sbjct: 577 YSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHG 636
Query: 164 REGNVIEARKVFDRI-QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
GNV E +KVF I D I P + ++ Y +A + +A +EM + +P
Sbjct: 637 LMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 104/230 (45%), Gaps = 2/230 (0%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLLRVGDYGSVW 67
E + L+ + +I +A +L +M+ +P + + L + + + V
Sbjct: 156 EPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVD 215
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLH-LMPKFGCDPDAFTYNILINA 126
L+K+M + P++VT N+++ G+ R E +L ++ C PD +T NI+++
Sbjct: 216 SLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSV 275
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
+ GK + W G EP TF+ ++ + ++ + V + ++ +
Sbjct: 276 FGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWT 335
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
T+ YN +++ + + + +++MR +G+ D TF L+ G+ G
Sbjct: 336 TSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAG 385
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 5/210 (2%)
Query: 29 FEALDVLHRMRDVGV-RPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNV 87
+AL+V +R+ +P L LL + G KLF +ML +G P+ +
Sbjct: 105 LQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTA 164
Query: 88 MICGFCRQQGLVVGESLLHLMPKF-GCDPDAFTYNILINAYCIKGKTSVAMDWL-NMMMK 145
++ + R + S+L M F C PD FTY+ L+ A C+ +D L M +
Sbjct: 165 LLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKA-CVDASQFDLVDSLYKEMDE 223
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVF-DRIQDMGIAPNTTIYNTLMDGYVKAREIG 204
P+ T + ++ R G + KV D + P+ N ++ + +I
Sbjct: 224 RLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID 283
Query: 205 QANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
YE+ R G+ P+ TFNIL+G + K
Sbjct: 284 MMESWYEKFRNFGIEPETRTFNILIGSYGK 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 44/272 (16%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHR-MRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D +TL++ ++ F+ +D L++ M + + P+ I+ RVG + +
Sbjct: 192 QPDVFTYSTLLKACVDASQ-FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQME 250
Query: 68 KLFKDML-RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
K+ DML +P T N+++ F + + ES FG +P+ T+NILI +
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310
Query: 127 YCIK---GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG- 182
Y K K S M++ M K + +T++ I+ A G+ FD+++ G
Sbjct: 311 YGKKRMYDKMSSVMEY---MRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGM 367
Query: 183 ----------------------------------IAPNTTIYNTLMDGYVKAREIGQANM 208
I NT YN ++ KA ++ +
Sbjct: 368 KADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMER 427
Query: 209 LYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+Y M+ + D TF I+V + K G N +
Sbjct: 428 VYIRMKERQCVCDSRTFEIMVEAYEKEGMNDK 459
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 93 CRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSM 152
++Q L E L + P TY L+ G+ + A + M++ G EP++
Sbjct: 100 AKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTV 159
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDM-GIAPNTTIYNTLMDGYVKAREIGQANMLYE 211
++ ++ A R + +A + D+++ P+ Y+TL+ V A + + LY+
Sbjct: 160 ELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYK 219
Query: 212 EMRGKGVSPDCVTFNILVGGHYKYGR 237
EM + ++P+ VT NI++ G+ + GR
Sbjct: 220 EMDERLITPNTVTQNIVLSGYGRVGR 245
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMP-KFGCDPDA 117
RVG + + K+F +M + + ++++FN ++ + + E + +P K +PD
Sbjct: 118 RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDV 177
Query: 118 FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR 177
+YN LI C KG + A+ ++ + G +P TF+ ++H +G E +++ R
Sbjct: 178 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR 237
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ + + + YN + G + + L+++++G + PD TF ++ G G+
Sbjct: 238 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 297
Query: 238 NGE 240
E
Sbjct: 298 LDE 300
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D + NTL++G G EA+ ++ + + G++P IL G + +
Sbjct: 174 EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
++ M+ K + ++N + G + SL + PD FT+ +I +
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFV 293
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
+GK A+ W + KNGC P F++++ A+C+ G++ A ++ I + +
Sbjct: 294 SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 189 IYNTLMDGYVKAREIGQANMLYE 211
+ ++D VK + +A + E
Sbjct: 354 VLQEVVDALVKGSKQDEAEEIVE 376
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 3/214 (1%)
Query: 25 VGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK-GPRPSSV 83
VGM A V M + + + + L + + V +FK++ K P
Sbjct: 119 VGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVA 178
Query: 84 TFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD-WLNM 142
++N +I G C + +L+ + G PD T+NIL++ KGK W M
Sbjct: 179 SYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARM 238
Query: 143 MMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKARE 202
+ KN + + +++ + L E E +FD+++ + P+ + ++ G+V +
Sbjct: 239 VEKN-VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 297
Query: 203 IGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ +A Y+E+ G P FN L+ K G
Sbjct: 298 LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAG 331
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%)
Query: 41 VGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVV 100
+ + P +++ L + L G + L ++ KG +P +TFN+++ +
Sbjct: 171 LSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEE 230
Query: 101 GESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
GE + M + D +YN + ++ K+ + + + N +P + TF+ ++
Sbjct: 231 GEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK 290
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
EG + EA + I+ G P ++N+L+ KA ++ A L +E+ K +
Sbjct: 291 GFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLV 350
Query: 221 DCVTFNILVGGHYKYGRNGE 240
D +V K + E
Sbjct: 351 DEAVLQEVVDALVKGSKQDE 370
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMP-KFGCDPDA 117
+ G + + K+F++M + + S ++FN ++ + + V E L + +P K PD
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 180
Query: 118 FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR 177
+YN LI A C K A+ L+ + G +P + TF+T++ + +G +++ +
Sbjct: 181 VSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAK 240
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ + +A + YN + G + + L+ E++ G+ PD +FN ++ G G+
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 238 NGE 240
E
Sbjct: 301 MDE 303
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 3/215 (1%)
Query: 24 NVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK-GPRPSS 82
GM A V M + + S+ + L + V +LF ++ K +P
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 180
Query: 83 VTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD-WLN 141
V++N +I C + L +LL + G PD T+N L+ + +KG+ + + W
Sbjct: 181 VSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAK 240
Query: 142 MMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAR 201
M+ KN + T++ + L E E +F ++ G+ P+ +N ++ G +
Sbjct: 241 MVEKN-VAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEG 299
Query: 202 EIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
++ +A Y+E+ G PD TF +L+ K G
Sbjct: 300 KMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 83/199 (41%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL++ + EA+ +L + + G++P + L G + +++
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
M+ K T+N + G + +L + G PD F++N +I +
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK A W ++K+G P ATF+ ++ A+C+ G+ A ++F T
Sbjct: 299 GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTL 358
Query: 191 NTLMDGYVKAREIGQANML 209
L+D VK + +A +
Sbjct: 359 QQLVDELVKGSKREEAEEI 377
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%), Gaps = 4/224 (1%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+TL+R + M A+ +M G S + L L ++ V +LF ++ +
Sbjct: 106 STLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQ 165
Query: 76 KGPR--PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
+ + P +++ ++I +C ++ M G + + ++++ KG+
Sbjct: 166 RYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGEL 225
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
VA + N M+K GCE A ++ + + +E +++ + + MG+ P+T YN L
Sbjct: 226 EVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPE-RVKELIEEMSSMGLKPDTISYNYL 284
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
M Y + + +A +YE + G +P+ TF L+ H Y R
Sbjct: 285 MTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI-FHLCYSR 327
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 3 QNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD 62
Q +N+ D L++ + + G +A++++ +M+ G+ + A T + L + G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
L+ +M++KG + +NV I ++ V E L+ M G PD +YN
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKE-LIEEMSSMGLKPDTISYNY 283
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
L+ AYC +G A + N C P+ ATF T++ LC + +F + M
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMH 343
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
P+ L+ G V+ ++ A L ++ K
Sbjct: 344 KIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 9/214 (4%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRM--RDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
D V LM+G+ M EA++ + VR S A + L G + K
Sbjct: 272 DGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALK 331
Query: 69 LFKDMLRKG---PRPSSV---TFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
LF D ++K PR +V TFNVM+ G+C + M F C PD ++N
Sbjct: 332 LF-DAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNN 390
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
L+N C + A M + +P T+ +M +EG + E + + +
Sbjct: 391 LMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESN 450
Query: 183 IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
+ PN +YN L D +KA ++ A ++ M K
Sbjct: 451 LRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK 484
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 117 AFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP-----SMATFSTIMHALCREGNVIEA 171
A YN ++ A GK A+ + + K P ++ TF+ +++ C G EA
Sbjct: 310 AMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEA 369
Query: 172 RKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+VF ++ D +P+T +N LM+ + +A LY EM K V PD T+ +L+
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDT 429
Query: 232 HYKYGRNGE 240
+K G+ E
Sbjct: 430 CFKEGKIDE 438
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 79 RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD 138
RP+ T N ++ RQ L + + G P+ TYN++ AY K +A++
Sbjct: 127 RPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALE 186
Query: 139 WLNMMMKNG-CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ + N PS+ATF ++ L N+ +A ++ + + G + +Y+ LM G
Sbjct: 187 HYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGC 246
Query: 198 VKAREIGQANMLYEEMRGK--GVSPDCVTFNILVGGHY 233
VK + LY+E++ K G D V + L+ G++
Sbjct: 247 VKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYF 284
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+LF++M ++G ++VT+ +I G + + + + M G PD TYNIL++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 128 CIKGKTSVAM---------DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
C GK A+ D + G +P++ T++T++ C++G EA +F ++
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
++ G P++ YNTL+ +++ + + L +EMR + D T+ ++
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVT 172
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 32 LDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICG 91
+++ M G+ + T L + L + GD ++FK+M+ G P +T+N+++ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 92 FCR----QQGLVVGE-----SLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNM 142
C+ ++ LV G+ L + G P+ TY +I+ +C KG A
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 143 MMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
M ++G P T++T++ A R+G+ + ++ ++ A + + Y + D
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
Query: 103 SLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
L M + G + TY LI G +A + M+ +G P + T++ ++ L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 163 CREGNVIEARKVFDRIQD----------MGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
C+ G +E V +++D G+ PN Y T++ G+ K +A L+ +
Sbjct: 62 CKNGK-LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 213 MRGKGVSPDCVTFNILVGGHYKYG 236
M+ G PD T+N L+ H + G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDG 144
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY------GSV--- 66
TL++G G A ++ M GV P + IL L + G G V
Sbjct: 20 TTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDG 79
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
W LF + KG +P+ VT+ MI GFC++ +L M + G PD+ TYN LI A
Sbjct: 80 WDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRA 139
Query: 127 YCIKGKTSVAMDWLNMM 143
+ G + + + + M
Sbjct: 140 HLRDGDKAASAELIKEM 156
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
M+ M + G + T++T++ L + G+ A+++F + G+ P+ YN L+DG
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 197 YVKAREIGQANM---------LYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
K ++ +A + L+ + KGV P+ VT+ ++ G K G E
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEE 113
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRM---RDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
N+++ F G + A+++ M +++ RP++ ILF+ LL G+ + ++ +
Sbjct: 211 NSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYME 270
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
+R SL M G +PD F N L+ Y +
Sbjct: 271 TVR---------------------------SLFRQMVDSGIEPDVFALNCLVKGYVLSLH 303
Query: 133 TSVAMDWLNMM-MKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
+ A+ + M + CEP+ T+ ++H LC +G I AR++ ++ G PN YN
Sbjct: 304 VNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYN 363
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+L++ + + EI A EM G D +++ LV + G+ E
Sbjct: 364 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDE 412
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Query: 33 DVLHRMRDVGVRPSLSAITILFR---LLLRVGDYGSVWKLFKDM-LRKGPRPSSVTFNVM 88
+ +M D G+ P + A+ L + L L V D ++F M + P+S T++ +
Sbjct: 274 SLFRQMVDSGIEPDVFALNCLVKGYVLSLHVND---ALRIFHQMSVVYDCEPNSFTYDYL 330
Query: 89 ICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC 148
I G C Q + LL M G P+ +YN L+NA+ + G+ A+ L M++NG
Sbjct: 331 IHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGR 390
Query: 149 EPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
++ T++ CR+G EA ++ + +++
Sbjct: 391 VVDFISYRTLVDESCRKGKYDEATRLLEMLRE 422
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
A++ L M G P++ ++ L + L R + K ++ + KG ++++MI
Sbjct: 346 AVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMIS 405
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP 150
C+ + + L M K G PD YN LI A C A + M GC+
Sbjct: 406 FLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKM 465
Query: 151 SMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQA 206
++ T++ ++ L EG E+ ++FD++ + GI P+ TIY +L++G K +I A
Sbjct: 466 NLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 1/230 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
DF + F+ G ++E VL + R +GV P S F L L + K
Sbjct: 257 DFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRA-FILDLISAKRLTEAKEV 315
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+++ G P + G L M G P T + L C
Sbjct: 316 AEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRH 375
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
K+ + ++ G + ++S ++ LC+ G V E+ ++ G+AP+ ++Y
Sbjct: 376 DKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLY 435
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
N L++ KA I A L++EM +G + T+N+L+ + G E
Sbjct: 436 NALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEE 485
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 63/136 (46%)
Query: 42 GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVG 101
G L + +++ L + G + ++M ++G P +N +I C+ + +
Sbjct: 392 GYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPA 451
Query: 102 ESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHA 161
+ L M GC + TYN+LI +G+ ++ + M++ G EP + +++
Sbjct: 452 KKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG 511
Query: 162 LCREGNVIEARKVFDR 177
LC+E + A +VF +
Sbjct: 512 LCKETKIEAAMEVFRK 527
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 5/202 (2%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A +L +R++ +P A ++ + G+ + K + G P S + I
Sbjct: 241 DAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFI 300
Query: 90 CGFCRQQGLVVGESLLHLMP--KFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG 147
+ L + + ++ KF D D + LI + S A+++L M+ G
Sbjct: 301 LDLISAKRLTEAKEVAEVIVSGKFPMDNDIL--DALIGSVSAVDPDS-AVEFLVYMVSTG 357
Query: 148 CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQAN 207
P++ T S + LCR K ++ + G Y+ ++ KA + ++
Sbjct: 358 KLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESY 417
Query: 208 MLYEEMRGKGVSPDCVTFNILV 229
+EM+ +G++PD +N L+
Sbjct: 418 TALQEMKKEGLAPDVSLYNALI 439
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 36/246 (14%)
Query: 22 FLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPS 81
F+ + +AL++ + D + ++ + L++ G S KLF M R G +P
Sbjct: 141 FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPD 200
Query: 82 SVTFNVMICGFCRQQ-------------------------GLVVG-----------ESLL 105
VT+N ++ G + + G V+ E+ +
Sbjct: 201 VVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFI 260
Query: 106 HLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCRE 165
M G P+ + Y+ L+N+Y KG A + + M G P+ +T++ +
Sbjct: 261 QQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKG 320
Query: 166 GNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
G +R++ ++ G A N Y LMDG KA ++ +A ++++M+GKGV D
Sbjct: 321 GLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYAN 380
Query: 226 NILVGG 231
+I++
Sbjct: 381 SIMISA 386
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
HN + D + T++ + G EA + + +M+ G P++ + L GDY
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+L +M G P+ V ++ + + LL + G + Y +L+
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
+ GK A + M G S ++ ALCR EA+++ +
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ + NT++ Y +A E+ + ++M + VSPD TF+IL+
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/202 (16%), Positives = 90/202 (44%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
++L+ + G +A +++ M+ +G+ P+ +T L ++ ++ G + +L ++
Sbjct: 276 SSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELES 335
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G + + + +++ G + L S+ M G D + +I+I+A C +
Sbjct: 336 AGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKE 395
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A + + + +T++ A CR G + ++ ++ + ++P+ ++ L+
Sbjct: 396 AKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIK 455
Query: 196 GYVKAREIGQANMLYEEMRGKG 217
++K + A +M KG
Sbjct: 456 YFIKEKLHLLAYQTTLDMHSKG 477
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Query: 8 YESDFSVLN-----TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD 62
+E + S+L+ +++ G L G + +ALD ++ M+++G +P + T L +
Sbjct: 845 FEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQ 904
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
V + + M + PS VT+ MICG+ + + M + G PD TY+
Sbjct: 905 LEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSK 964
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGN 167
IN C K+ A+ L+ M+ G PS F T+ + L REG
Sbjct: 965 FINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 97/215 (45%), Gaps = 5/215 (2%)
Query: 30 EALDVLHRMRDVGVR----PSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
E +DV+ + D VR A L + G +L +++ K + F
Sbjct: 308 EKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYF 367
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
+++ G CR +V ++ +M + D D+ Y I+I+ Y + S A++ ++ K
Sbjct: 368 EILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKK 426
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
+G P ++T++ IM L + + +F+ + + GI P++ ++ G++ + +
Sbjct: 427 SGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAE 486
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
A ++ M KG+ P +++I V + R E
Sbjct: 487 AWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDE 521
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 1/233 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+E D + N ++R G AL+ M + G+ L +L + + V
Sbjct: 255 FELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQ 314
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+ DM+R F ++ FC + L+ + DA + IL+
Sbjct: 315 SIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGL 374
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C + A++ +++M + + S + I+ R+ +V +A + F+ I+ G P
Sbjct: 375 CRANRMVDALEIVDIMKRRKLDDS-NVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRV 433
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ Y +M K ++ + L+ EM G+ PD V +V GH R E
Sbjct: 434 STYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAE 486
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 95/246 (38%), Gaps = 37/246 (15%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
+ + MR G + I+ R G + FK+M G PSS TF +I C
Sbjct: 700 LFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC 759
Query: 94 RQQGLVVGES--LLHLMPKFGCDPD----------------------------------A 117
++G V E+ M + G PD
Sbjct: 760 EKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVT 819
Query: 118 FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR 177
Y+I I A C GK A+ L T+ +I+H L + G++ +A +
Sbjct: 820 VAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNS 879
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
++++G P +Y +L+ + K +++ + ++M G+ P VT+ ++ G+ G+
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 238 NGE-WN 242
E WN
Sbjct: 940 VEEAWN 945
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 1/215 (0%)
Query: 24 NVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSV 83
VG +A L + +G P A +I R L R+G +
Sbjct: 797 EVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQY 855
Query: 84 TFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMM 143
T+ ++ G ++ L ++ M + G P Y LI + + + ++ M
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 144 MKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREI 203
CEPS+ T++ ++ G V EA F +++ G +P+ Y+ ++ +A +
Sbjct: 916 EGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKS 975
Query: 204 GQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRN 238
A L EM KG++P + F + G + G++
Sbjct: 976 EDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKH 1010
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%)
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
V +L +M + G T+ ++I + + + + G + M K G + DA YNI+I
Sbjct: 208 VDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIR 267
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
+ CI G+ +A+++ MM+ G + T+ ++ + + V + + D + +
Sbjct: 268 SLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEIS 327
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ L+ + + +I +A L E++ K + D F ILV G + R
Sbjct: 328 EHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANR 379
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 86/209 (41%), Gaps = 1/209 (0%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
S+ L++ F G I EAL+++ +++ + IL + L R ++
Sbjct: 327 SEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEI 386
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
M R+ S+V + ++I G+ RQ + ++ K G P TY ++
Sbjct: 387 VDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFK 445
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
+ + N M++NG EP + ++ + V EA KVF +++ GI P
Sbjct: 446 LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKS 505
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGV 218
Y+ + ++ + ++ +M +
Sbjct: 506 YSIFVKELCRSSRYDEIIKIFNQMHASKI 534
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 87/201 (43%), Gaps = 1/201 (0%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D L++G + +AL+++ M+ + S + I+ LR D + F
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDS-NVYGIIISGYLRQNDVSKALEQF 421
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+ + + G P T+ ++ + + G +L + M + G +PD+ ++ + +
Sbjct: 422 EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQ 481
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ + A + M + G +P+ ++S + LCR E K+F+++ I I+
Sbjct: 482 NRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIF 541
Query: 191 NTLMDGYVKAREIGQANMLYE 211
+ ++ K E + +++ E
Sbjct: 542 SWVISSMEKNGEKEKIHLIKE 562
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%)
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG + T+ M+ F + S+ HLM + G D TY LI+ G
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
AM M NGCEP++ +++ M L +G V EA +V+ + ++PN Y LM+
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 196 GYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
V + +A ++ +M+ GV PD NIL+ K+G
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETS 279
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 50 ITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMP 109
++ L R R + K+F++M + G + V+FN ++ C L E + L
Sbjct: 105 LSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAA-CLHSDLF--ERVPQLFD 161
Query: 110 KF-----GCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR 164
+F PD +Y +LI +YC GK AM+ + M G E ++ F+TI+ +L +
Sbjct: 162 EFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYK 221
Query: 165 EGNVIEARKVFDRIQDMGIAPNTTIYNT-LMDGYVKAREIGQANMLYEEMRGKGVSPDCV 223
G V EA ++ + + G + T+YN LM+ ++ E + L EEM G+ PD V
Sbjct: 222 NGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPE--RVKELMEEMSSVGLKPDTV 279
Query: 224 TFNILVGGH 232
++N L+ +
Sbjct: 280 SYNYLMTAY 288
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 3 QNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD 62
Q +N D L++ + + G +A++++ M GV ++ A T + L + G
Sbjct: 165 QRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGL 224
Query: 63 YGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
L+ +M+ KG + +NV + ++ V E L+ M G PD +YN
Sbjct: 225 VDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKE-LMEEMSSVGLKPDTVSYNY 283
Query: 123 LINAYCIKGKTSVAMDWLNMMMKNGCE-PSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
L+ AYC+KG S A + G E P+ ATF T++ LC G + VF + +
Sbjct: 284 LMTAYCVKGMMSEAKK-----VYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIV 338
Query: 182 GIAPNTTIYNTLMDGYVK 199
P+ L +G VK
Sbjct: 339 HKIPDFKTCKHLTEGLVK 356
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 14/231 (6%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS---- 65
D V L+ + G + +A+++L ++ +R L A + + G + S
Sbjct: 224 EDIVVYRILLDALCDAGEVDDAIEILGKI----LRKGLKAPKRCYHHI-EAGHWESSSEG 278
Query: 66 ---VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
V +L + L +G P +++ M + LV GE +L M G +P F Y
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 123 LINAYCIKGKTSVAMDWLNM-MMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI-QD 180
+ A C GK A+ +N MM+ C P++ ++ ++ LC +G +EA ++ +
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ 398
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ N Y TL+DG + + +A+ + EEM K P T+++++ G
Sbjct: 399 VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 2/190 (1%)
Query: 42 GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVG 101
G P L + + + L G ++ M KG P+ + + CR L
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 102 ESLLHL-MPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN-GCEPSMATFSTIM 159
S+++ M + C P YN+LI C GK+ A+ +L M K C + T+ T++
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 160 HALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
LCR+G +EA +V + + P Y+ ++ G +A M EEM + +
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Query: 220 PDCVTFNILV 229
P+ + L
Sbjct: 473 PESSVWKALA 482
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 93/240 (38%), Gaps = 11/240 (4%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y + SV T++ + E V+ RM++ S + R R G
Sbjct: 42 YGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAI 101
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF----GCDPDAFTYNIL 123
LFK + S++F+ ++ ++ L E+ H+ K+ + N+L
Sbjct: 102 SLFKSLHEFNCVNWSLSFDTLLQEMVKESEL---EAACHIFRKYCYGWEVNSRITALNLL 158
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV----FDRIQ 179
+ C ++ +A M GC P ++ +M C EG + EA + F RI
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 180 DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
G + +Y L+D A E+ A + ++ KG+ ++ + GH++ G
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 103/237 (43%), Gaps = 9/237 (3%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVG-VRPSLSAITILFRLLLRVGDYGSVW 67
E SV +++R F G + +A+ + + + V SLS T+L + +++ + +
Sbjct: 78 ECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL-QEMVKESELEAAC 136
Query: 68 KLFKDMLRKGPRPSSVT-FNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
+F+ S +T N+++ C+ + + M GC PD +Y IL+
Sbjct: 137 HIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKG 196
Query: 127 YCIKGKTSVAMDWLNMMM----KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
+C++GK A L M + G + + ++ ALC G V +A ++ +I G
Sbjct: 197 FCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKG 256
Query: 183 IAPNTTIYNTLMDGYVKAREIG--QANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ Y+ + G+ ++ G + L E +G P +++ + ++ G+
Sbjct: 257 LKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGK 313
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 14/231 (6%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS---- 65
D V L+ + G + +A+++L ++ +R L A + + G + S
Sbjct: 224 EDIVVYRILLDALCDAGEVDDAIEILGKI----LRKGLKAPKRCYHHI-EAGHWESSSEG 278
Query: 66 ---VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNI 122
V +L + L +G P +++ M + LV GE +L M G +P F Y
Sbjct: 279 IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGA 338
Query: 123 LINAYCIKGKTSVAMDWLNM-MMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI-QD 180
+ A C GK A+ +N MM+ C P++ ++ ++ LC +G +EA ++ +
Sbjct: 339 KVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ 398
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+ N Y TL+DG + + +A+ + EEM K P T+++++ G
Sbjct: 399 VSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 2/190 (1%)
Query: 42 GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVG 101
G P L + + + L G ++ M KG P+ + + CR L
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 102 ESLLHL-MPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN-GCEPSMATFSTIM 159
S+++ M + C P YN+LI C GK+ A+ +L M K C + T+ T++
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 160 HALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
LCR+G +EA +V + + P Y+ ++ G +A M EEM + +
Sbjct: 413 DGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Query: 220 PDCVTFNILV 229
P+ + L
Sbjct: 473 PESSVWKALA 482
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 93/240 (38%), Gaps = 11/240 (4%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y + SV T++ + E V+ RM++ S + R R G
Sbjct: 42 YGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAI 101
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF----GCDPDAFTYNIL 123
LFK + S++F+ ++ ++ L E+ H+ K+ + N+L
Sbjct: 102 SLFKSLHEFNCVNWSLSFDTLLQEMVKESEL---EAACHIFRKYCYGWEVNSRITALNLL 158
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV----FDRIQ 179
+ C ++ +A M GC P ++ +M C EG + EA + F RI
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 180 DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
G + +Y L+D A E+ A + ++ KG+ ++ + GH++ G
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEG 278
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 103/237 (43%), Gaps = 9/237 (3%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVG-VRPSLSAITILFRLLLRVGDYGSVW 67
E SV +++R F G + +A+ + + + V SLS T+L + +++ + +
Sbjct: 78 ECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL-QEMVKESELEAAC 136
Query: 68 KLFKDMLRKGPRPSSVT-FNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
+F+ S +T N+++ C+ + + M GC PD +Y IL+
Sbjct: 137 HIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKG 196
Query: 127 YCIKGKTSVAMDWLNMMM----KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
+C++GK A L M + G + + ++ ALC G V +A ++ +I G
Sbjct: 197 FCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKG 256
Query: 183 IAPNTTIYNTLMDGYVKAREIG--QANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
+ Y+ + G+ ++ G + L E +G P +++ + ++ G+
Sbjct: 257 LKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGK 313
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
V +M+ G +P + + L++ G + +++D G S TF +++ G C
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 94 RQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMA 153
+ + +L M + C PD F Y +I +G ++ + M ++ +P +
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 154 TFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM 213
+ T++ LC++G V ++F ++ I + IY L++G+V ++ A L+E++
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDL 394
Query: 214 RGKGVSPDCVTFNILVGG 231
G D +N ++ G
Sbjct: 395 VDSGYIADIGIYNAVIKG 412
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 2/231 (0%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLLRVGDYGSV 66
Y+ DF+ N LN F A D L + D G PS IL R+ V
Sbjct: 154 YKHDFAAYNAFAYC-LNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRV 212
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
+ +++ M + G +P +N ++ + + ++ + G ++ T+ IL+
Sbjct: 213 YYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKG 272
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
C G+ ++ L M +N C+P + ++ ++ L EGN+ + +V+D ++ I P+
Sbjct: 273 LCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPD 332
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
Y TL+ G K + + L+ EM+GK + D + +L+ G G+
Sbjct: 333 VMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGK 383
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 82/181 (45%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L++G G I E L++L RMR+ +P + A T + + L+ G+ + +++ +M R
Sbjct: 269 LVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDE 328
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
+P + + ++ G C+ + G L M D Y +LI + GK A
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC 388
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ ++ +G + ++ ++ LC V +A K+F + + P+ + +M Y
Sbjct: 389 NLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAY 448
Query: 198 V 198
V
Sbjct: 449 V 449
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
ALDV + ++ G S+S IL L ++GD LF +M + G P S ++++ IC
Sbjct: 492 ALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAIC 550
Query: 91 GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN-GCE 149
F + + S + + C P Y L C G+ M + + N
Sbjct: 551 CFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG 610
Query: 150 PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANML 209
P ++ + +C+ N + KV D + G+ N IY ++ G K I A +
Sbjct: 611 PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREV 670
Query: 210 YEEMRGKGV 218
+ E++ + V
Sbjct: 671 FTELKKRKV 679
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 109/235 (46%), Gaps = 6/235 (2%)
Query: 5 HNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG 64
E E DF L+ +M ++ + + + +VL R+ ++G P +T F+LL +
Sbjct: 431 EEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGY-PVSDYLTQFFKLLCADEEKN 489
Query: 65 SV-WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
++ +F + KG SV +N+++ + + SL + M K G +PD+ +Y+I
Sbjct: 490 AMALDVFYILKTKGHGSVSV-YNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIA 548
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR--IQDM 181
I + KG A + +++ C PS+A + ++ LC+ G I+A + R + ++
Sbjct: 549 ICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGE-IDAVMLLVRECLGNV 607
Query: 182 GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
P Y + K + + +EM +GV + V + ++ G K+G
Sbjct: 608 ESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHG 662
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 58/133 (43%), Gaps = 8/133 (6%)
Query: 112 GCDPDAFTYNILINAYCIK--GKTSVAMDWLNMMMKNGCEPSMATFSTI--MHALCREGN 167
G D YN AYC+ G A +M G PS F + MHA R G
Sbjct: 153 GYKHDFAAYNAF--AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG- 209
Query: 168 VIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
+ V+++++ G P +YN +MD VK A +YE+ + G+ + TF I
Sbjct: 210 -LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMI 268
Query: 228 LVGGHYKYGRNGE 240
LV G K GR E
Sbjct: 269 LVKGLCKAGRIEE 281
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 32/239 (13%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
E E D N+++ GF G I EAL + HRM V P+ + LF +G
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV- 461
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDA--------- 117
SS+ + GF + VG +LL K G DP +
Sbjct: 462 -------------GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG-DPQSARLIFDTIE 507
Query: 118 ----FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
T++ +I Y +G T +++ M+K +P+ +TF++I+ A G V E +K
Sbjct: 508 EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKK 567
Query: 174 VFDRI-QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
F + +D P+T Y ++D +A E+ QA + E+M + PD F + G
Sbjct: 568 YFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP---IQPDVRCFGAFLHG 623
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 86/183 (46%), Gaps = 10/183 (5%)
Query: 50 ITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMP 109
+T L + + G+ S K+F D+ + + V + MI G+ + G L + M
Sbjct: 179 LTGLLDMYAKCGEIKSAHKVFNDITLR----NVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 110 KFGCDPDAFTYNILINAYCIKGKTSVAMDWLN-MMMKNGCEPSMATFSTIMHALCREGNV 168
+ + +TY LI A C K W + ++K+G E S ++++ + G++
Sbjct: 235 ENNVLGNEYTYGTLIMA-CTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 293
Query: 169 IEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
AR+VF+ + + ++ ++ GY + +A L+++M+G + P+CVT +
Sbjct: 294 SNARRVFNEHSHVDL----VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASV 349
Query: 229 VGG 231
+ G
Sbjct: 350 LSG 352
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 8/167 (4%)
Query: 73 MLRKGPR----PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+LRK P +V +N++I F + L + + L+ M G PD TY +IN YC
Sbjct: 152 VLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYC 211
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI--QDMG--IA 184
GK A M K+ C + T+S I+ +C+ G++ A ++ + +D G I+
Sbjct: 212 NAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLIS 271
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
PN Y ++ + + R + +A ++ + M +G P+ VT +L+ G
Sbjct: 272 PNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
+D N ++R F + G + A ++ M VG+ P + T + G W+L
Sbjct: 163 ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG----CDPDAFTYNILIN 125
K+M + +SVT++ ++ G C+ + LL M K P+A TY ++I
Sbjct: 223 AKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQ 282
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEA-RKVFDRIQDMGIA 184
A+C K + A+ L+ M GC P+ T ++ + ++A K+ D++ +G
Sbjct: 283 AFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGV 342
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
+ +++ ++ + +A ++ M +GV PD
Sbjct: 343 SLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPD 379
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 4/181 (2%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
EAL VL + + V A ++ RL GD L K+M G P +T+ MI
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 90 CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG-- 147
G+C + L M K C ++ TY+ ++ C G A++ L M K
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGG 267
Query: 148 --CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
P+ T++ ++ A C + V EA V DR+ + G PN L+ G ++ E +
Sbjct: 268 GLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVK 327
Query: 206 A 206
A
Sbjct: 328 A 328
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + N ++ G G EA ++ + G++P + + +++R G KL+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQT----YNMMIRFSSLGRAEKLY 68
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
+M+R+G P ++T+N MI G C+Q L + T+N LIN YC
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKA 119
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ M+ M + G ++ T++T++H + G+ A +F + G+ ++ +
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 191 NTLMDGYVKAREIGQA 206
++ +E+ +A
Sbjct: 180 RDILPQLCSRKELRKA 195
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 38 MRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQG 97
MR+ + + I+ L + G + +F ++L G +P T+N+MI R
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 98 LVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFST 157
L E L M + G PD TYN +I+ C + K + A S +TF+T
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNT 111
Query: 158 IMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
+++ C+ V + +F + GI N Y TL+ G+ + + A +++EM G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 218 VSPDCVTF 225
V +TF
Sbjct: 172 VYSSSITF 179
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+FK M + +N++I G C+ ++ + G PD TYN++I +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G+ A M++ G P T+++++H LC++ + +ARKV + + +
Sbjct: 60 SLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCS 107
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+NTL++GY KA + L+ EM +G+ + +T+ L+ G + G
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVG 155
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 104 LLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALC 163
+ +M + D D YNI+I+ C GK A + ++ +G +P + T++ ++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 164 REGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCV 223
R ++ A K++ + G+ P+T YN+++ G K ++ QA + VS C
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 224 TFNILVGGHYKYGR 237
TFN L+ G+ K R
Sbjct: 108 TFNTLINGYCKATR 121
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 87/184 (47%)
Query: 29 FEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVM 88
F+ + L +R P L T++ R L+ G V + M P V + ++
Sbjct: 233 FDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIV 292
Query: 89 ICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC 148
+ G + + L + G PD +TYN+ IN C + A+ ++ M K G
Sbjct: 293 LQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGS 352
Query: 149 EPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANM 208
EP++ T++ ++ AL + G++ A+ ++ ++ G+ N+ ++ ++ Y++ E+ A+
Sbjct: 353 EPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHG 412
Query: 209 LYEE 212
L EE
Sbjct: 413 LLEE 416
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D++V+ MR + G E + VL++M+ V P L TI+ + ++ DY KLF
Sbjct: 253 DYTVV---MRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLF 309
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
++L G P T+NV I G C+Q + ++ M K G +P+ TYNILI A
Sbjct: 310 DELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKA 369
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
G S A M NG + TF ++ A V+ A + + +M +
Sbjct: 370 GDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNV 422
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 9/228 (3%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
++L L+R ++ ++ E L RM GVR S IL L R+G+ +L +
Sbjct: 148 ALLLVLVRKRQSLELVPEILVKACRM---GVRLEESTFGILIDALCRIGEVDCATELVRY 204
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGL----VVGESLLHLMPKFGCDPDAFTYNILINAYC 128
M + ++ ++ C+ + V+G L + K P Y +++
Sbjct: 205 MSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIG--YLEDLRKTRFSPGLRDYTVVMRFLV 262
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G+ + LN M + EP + ++ ++ + + + +A K+FD + +G+AP+
Sbjct: 263 EGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVY 322
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
YN ++G K +I A + M G P+ VT+NIL+ K G
Sbjct: 323 TYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAG 370
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 18/226 (7%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D + N L+R + +A +V H ++ +P L IL S WK
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKH-QFQPDLQTFNILL----------SGWKSS 227
Query: 71 KD-------MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
++ M KG +P VT+N +I +C+ + + L+ M + PD TY +
Sbjct: 228 EEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTV 287
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
I + G+ A + L M + GC P +A ++ + C + +A K+ D + G+
Sbjct: 288 IGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGL 347
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+PN T YN A ++G++ LY M G P+ + L+
Sbjct: 348 SPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLI 393
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 11/216 (5%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
++++ D N L+ G+ EA M+ G++P + L + + +
Sbjct: 208 HQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEK 264
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLV----VGESLLHLMPKFGCDPDAFTYN 121
+KL M + P +T+ +I G GL+ +L M ++GC PD YN
Sbjct: 265 AYKLIDKMREEEETPDVITYTTVIGGL----GLIGQPDKAREVLKEMKEYGCYPDVAAYN 320
Query: 122 ILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDM 181
I +CI + A ++ M+K G P+ T++ L ++ + +++ R+
Sbjct: 321 AAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGN 380
Query: 182 GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
PNT L+ + + ++ A L+E+M KG
Sbjct: 381 ECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 15/192 (7%)
Query: 46 SLSAITILFRLLLRVGDYGSVWKLFKDMLRK-----GPRPSSVTFNVMICGFCR-QQGLV 99
S S T+L+ +L R + +W+L + RK PR V + C +Q +
Sbjct: 108 SFSLDTMLY-ILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLG-RVAKLCSVRQTVE 165
Query: 100 VGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIM 159
L+P F D +N L+ C + + A + + + K+ +P + TF+ ++
Sbjct: 166 SFWKFKRLVPDFF---DTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILL 221
Query: 160 HALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
+ EA F+ ++ G+ P+ YN+L+D Y K REI +A L ++MR + +
Sbjct: 222 SGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEET 278
Query: 220 PDCVTFNILVGG 231
PD +T+ ++GG
Sbjct: 279 PDVITYTTVIGG 290
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 88/216 (40%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N+L+ + I +A ++ +MR+ P + T + L +G ++
Sbjct: 245 DVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVL 304
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K+M G P +N I FC + L + L+ M K G P+A TYN+ +
Sbjct: 305 KEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLA 364
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ + M+ N C P+ + ++ R V A ++++ + G + +
Sbjct: 365 NDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVS 424
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFN 226
+ L+D ++ +A EM KG P V+F
Sbjct: 425 DVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFK 460
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 3/214 (1%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ + + EA+ V R ++ G+ L A L L R LF R+
Sbjct: 184 LLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREF 243
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
N+++ G+C + + + C PD +Y +INA KGK AM
Sbjct: 244 G-CDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAM 302
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ M P + + ++ ALC + + EA +VF I + G PN YN+L+
Sbjct: 303 ELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHL 362
Query: 198 VKAREIGQANMLYEEMRGKG--VSPDCVTFNILV 229
K R + L EEM KG SP+ VTF+ L+
Sbjct: 363 CKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL 396
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 5/236 (2%)
Query: 7 EYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV 66
E+ D +N ++ G+ +G + EA + RP + + + L + G G
Sbjct: 242 EFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKA 301
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
+L++ M P N +I C ++ + + + + G DP+ TYN L+
Sbjct: 302 MELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKH 361
Query: 127 YCIKGKTSVAMDWLNMMMKNG--CEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
C +T + + M G C P+ TFS ++ R +V V +R+
Sbjct: 362 LCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDV---DIVLERMAKNKCE 418
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ +YN + YV+ + + ++ EM G+ PD T+ I + G + G+ GE
Sbjct: 419 MTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGE 474
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 5/214 (2%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
T++ G + +A+++ M D P + + L ++F+++ K
Sbjct: 287 TMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEK 346
Query: 77 GPRPSSVTFNVMICGFCR-QQGLVVGESLLHLMPKFG-CDPDAFTYNILINAYCIKGKTS 134
GP P+ VT+N ++ C+ ++ V E + + K G C P+ T++ L+ Y + K
Sbjct: 347 GPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK-YSQRSKDV 405
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
+ L M KN CE + ++ + + + R+++ ++ G+ P+ Y +
Sbjct: 406 DIV--LERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRI 463
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
G +IG+A ++EM KG+ P+ T +L
Sbjct: 464 HGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 44 RPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGES 103
RPS+ TI+ RL +VG + F +ML G P +V M+C + R +
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 104 LLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD-WLNMMMKNGCEPSMATFSTIMHAL 162
+ + YN ++++ K +D WL M+ + G P+ T++ ++ +
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMV-EEGVPPNEFTYTLVVSSY 303
Query: 163 CREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDC 222
++G EA K F ++ +G P Y++++ VKA + +A LYE+MR +G+ P
Sbjct: 304 AKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSN 363
Query: 223 VTFNILVGGHYK 234
T ++ +YK
Sbjct: 364 YTCATMLSLYYK 375
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%)
Query: 45 PSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESL 104
P S I + +R G + LF + KG P +VT ++++ + E +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 105 LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR 164
+ + D YN LI A GK A + M +G S+ T++T++ R
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 165 EGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVT 224
+ +A ++F + G+ + IY ++ Y K ++ +A L+ EM+ KG+ P +
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS 881
Query: 225 FNILV 229
+N++V
Sbjct: 882 YNMMV 886
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 100/231 (43%), Gaps = 4/231 (1%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y V ++R + VG I A + M +VG P A + R G + ++
Sbjct: 184 YRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAML 243
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQ--QGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
+K + + S+ +N M+ ++ G V+ L M + G P+ FTY ++++
Sbjct: 244 TFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVI--DLWLEMVEEGVPPNEFTYTLVVS 301
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
+Y +G A+ M G P T+S+++ + G+ +A +++ ++ GI P
Sbjct: 302 SYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVP 361
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ T++ Y K +A L+ +M + D V +++ + K G
Sbjct: 362 SNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLG 412
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVM--ICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
G LF +M +KG +P + ++N+M IC R V + LL M + G D
Sbjct: 858 GKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEV--DELLQAMERNGRCTDLS 915
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
TY LI Y + + A + ++ + G S + FS+++ AL + G + EA + + ++
Sbjct: 916 TYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKM 975
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
+ GI+P++ T++ GY+ + + + YE+M V D
Sbjct: 976 SEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDD 1018
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 2/222 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL++ L G + A ++ RM GV S+ + + R ++F + R
Sbjct: 778 NTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARR 837
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G + MI + + + SL M K G P +YN+++ C +
Sbjct: 838 SGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHH 896
Query: 136 AMD-WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
+D L M +NG ++T+ T++ EA K +++ GI + + +++L+
Sbjct: 897 EVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLL 956
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
VKA + +A Y +M G+SPD ++ G+ G
Sbjct: 957 SALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCG 998
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 5/230 (2%)
Query: 13 SVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
S +N ++ F+ G + +A + + +G+R I L + R +L+
Sbjct: 636 SAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY-- 693
Query: 73 MLRKGPR--PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
L G P MI + R L L + GCDP A T +IL+NA +
Sbjct: 694 -LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNR 752
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
GK A ++ E ++T++ A+ G + A ++++R+ G+ + Y
Sbjct: 753 GKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTY 812
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
NT++ Y + ++ +A ++ R G+ D + ++ + K G+ E
Sbjct: 813 NTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSE 862
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D + LM+ N G + A +V + G+R + TI + GD+
Sbjct: 606 DPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACS 665
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
++KDM K P V F+ +I + L +L G +Y+ L+ A C
Sbjct: 666 IYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACC 725
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
A++ + P+++T + ++ ALC + +A + D I+ +G+ PNT
Sbjct: 726 NAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTI 785
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCV 223
Y+ LM + + + L + +G GVSP+ +
Sbjct: 786 TYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
+D + TL+ G + +V H+M + GV +L L R G +
Sbjct: 500 ADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGA 559
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLV------VGESLLHLMPKFGCDPDAFTYNIL 123
+ + K +P V FN +I C Q G V + E P DPD + L
Sbjct: 560 YGILRSKNVKPDRVVFNALISA-CGQSGAVDRAFDVLAEMKAETHP---IDPDHISIGAL 615
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
+ A C G+ A + M+ K G + ++ +++ + G+ A ++ +++ +
Sbjct: 616 MKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDV 675
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
P+ ++ L+D A+ + +A + ++ + +G+ ++++ L+G
Sbjct: 676 TPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGA 723
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 3/178 (1%)
Query: 54 FRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGC 113
+ LLR G L +D+ ++ ++ C++Q V E+ K
Sbjct: 407 YNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQ-RAVKEAFR--FTKLIL 463
Query: 114 DPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
+P T+N+L++ A L ++ ++G ++T++ + + G V +
Sbjct: 464 NPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFE 523
Query: 174 VFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
VF ++ + G+ N + L+DG +A ++ +A Y +R K V PD V FN L+
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA 581
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Query: 80 PSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDW 139
P+ TFN+++ Q + +L L+ + G D Y LI++ GK +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 140 LNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVK 199
+ M +G E ++ TF ++ R G V +A + ++ + P+ ++N L+ +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 200 AREIGQANMLYEEMRGKG--VSPDCVTFNILV 229
+ + +A + EM+ + + PD ++ L+
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALM 616
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 52 ILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF 111
I+ R+L + + V L+ +M+RKG +P + T+ +I + + V L M K
Sbjct: 192 IMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKI 251
Query: 112 GCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMA---------TFSTIMHAL 162
G PD T I++ Y + A ++ K C+ + A T++T++
Sbjct: 252 GMQPDEVTTGIVLQMYKKAREFQKAEEFFK---KWSCDENKADSHVCLSSYTYNTMIDTY 308
Query: 163 CREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDC 222
+ G + EA + F R+ + GI P T +NT++ Y ++G+ L + M+ +PD
Sbjct: 309 GKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDT 367
Query: 223 VTFNILVGGHYK 234
T+NIL+ H K
Sbjct: 368 RTYNILISLHTK 379
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 17/227 (7%)
Query: 25 VGMIFEALDVLHRMRDV----GVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRP 80
+ I EALD + + D R S TI+ + + +++ FK KG
Sbjct: 128 IPAILEALDSIEDVEDALSPWAERLSNKERTIILKEQIHWERAVEIFEWFKS---KGCYE 184
Query: 81 SSVT-FNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDW 139
+V +N+M+ + +SL M + G P TY LI+ Y G A+ W
Sbjct: 185 LNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCW 244
Query: 140 LNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR------IQDMGIAPNTTIYNTL 193
L M K G +P T ++ + +A + F + D + ++ YNT+
Sbjct: 245 LGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTM 304
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+D Y K+ +I +A+ ++ M +G+ P VTFN ++ + YG NG+
Sbjct: 305 IDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMI---HIYGNNGQ 348
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
+LF+ M+ G P T+N ++ G L M + G D Y +I+++
Sbjct: 526 ELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSF 585
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
G+ ++A + M++ EP + + +++A GNV +A + +++ GI N+
Sbjct: 586 VKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNS 645
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMR---GKGVSPDCVTFNILV 229
IYN+L+ Y K + +A +Y ++ K PD T N ++
Sbjct: 646 VIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI 690
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
+ G + FK ML +G P++VTFN MI + L SL+ M K C PD
Sbjct: 310 KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTR 368
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
TYNILI+ + A + M +G +P ++ T+++A V EA + +
Sbjct: 369 TYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM 428
Query: 179 QDMGIAPNTTIYNTLMDGYVKAR 201
D + + + L YV+A
Sbjct: 429 DDDNVEIDEYTQSALTRMYVEAE 451
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 96/225 (42%), Gaps = 6/225 (2%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
Y SD ++ F+ +G + A +V M + + P + +L G+
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCD----PDAFTYNIL 123
+ M G +SV +N +I + + L E++ + + C+ PD +T N +
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ-SCNKTQYPDVYTSNCM 689
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
IN Y + A + M + G E + TF+ ++ + G EA ++ ++++M I
Sbjct: 690 INLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKI 748
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNIL 228
+ YN+++ + +A ++EM G+ PD TF L
Sbjct: 749 LTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 2/215 (0%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
TL+ F M+ EA ++ M D V + L R+ + W FK
Sbjct: 407 TLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVA 466
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA 136
G SS ++ I + + L E + + YN++I AY I A
Sbjct: 467 G-NMSSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKA 524
Query: 137 MDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDG 196
+ MM G P T++T++ L + R +++++ G + Y ++
Sbjct: 525 CELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISS 584
Query: 197 YVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
+VK ++ A +Y+EM + PD V + +L+
Sbjct: 585 FVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINA 619
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 93/223 (41%), Gaps = 4/223 (1%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D NTL++ + M + L +MR+ G + +++G +++
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K+M+ P V + V+I F + S + M + G ++ YN LI Y
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 131 GKTSVAMDWLNMMMKNGCE---PSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
G A ++++ + P + T + +++ V +A +FD ++ G A N
Sbjct: 659 GYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEA-NE 717
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
+ ++ Y K +A + ++MR + D +++N ++G
Sbjct: 718 FTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLG 760
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 17/230 (7%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG---------SV 66
NT++ G+ GM E VL M + G SL + L + +G YG S
Sbjct: 254 NTIIDGYGKAGMFEEMESVLADMIEDG--DSLPDVCTLNSI---IGSYGNGRNMRKMESW 308
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
+ F+ M G +P TFN++I F + S++ M K TYNI+I
Sbjct: 309 YSRFQLM---GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIET 365
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPN 186
+ G+ D M G +P+ T+ ++++A + G V++ V +I + + +
Sbjct: 366 FGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLD 425
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
T +N +++ Y +A ++ LY +M + PD +TF ++ + +G
Sbjct: 426 TPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHG 475
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVG-VRPSLSAITILFRLLLRVGDYGSVWKLFKD 72
V +L+ + ++ +A L M+ V +P + T+L ++G + V + +
Sbjct: 181 VYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLE 240
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCD-PDAFTYNILINAYCIKG 131
M G S+VT+N +I G+ + ES+L M + G PD T N +I +Y G
Sbjct: 241 MSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYG-NG 299
Query: 132 KTSVAMD-WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
+ M+ W + G +P + TF+ ++ + + G + V D ++ + T Y
Sbjct: 300 RNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTY 359
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
N +++ + KA I + + ++ +M+ +GV P+ +T+ LV + K G
Sbjct: 360 NIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAG 405
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 63 YGSVWKLFKDMLRKG----PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
+ S K+F ++LRK PR + T + G C+Q L +M G P
Sbjct: 124 WQSALKIF-NLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQ--ASLLFEVMLSEGLKPTID 180
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMK-NGCEPSMATFSTIMHALCREGNVIEARKVFDR 177
Y LI+ Y A L M + C+P + TF+ ++ C+ G + +
Sbjct: 181 VYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLE 240
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS-PDCVTFNILVGGHYKYG 236
+ +G+ +T YNT++DGY KA + + +M G S PD T N ++G Y G
Sbjct: 241 MSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGS-YGNG 299
Query: 237 RN 238
RN
Sbjct: 300 RN 301
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 87/231 (37%), Gaps = 37/231 (16%)
Query: 44 RPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGES 103
P T LF++L LF+ ML +G +P+ + +I + + + L S
Sbjct: 141 EPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS 200
Query: 104 LLHLMPKFG-CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
L M C PD FT+ +LI+ C G+ + + M G S T++TI+
Sbjct: 201 TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY 260
Query: 163 CREGNVIEARKV------------------------------------FDRIQDMGIAPN 186
+ G E V + R Q MG+ P+
Sbjct: 261 GKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPD 320
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
T +N L+ + KA + + + M + S VT+NI++ K GR
Sbjct: 321 ITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGR 371
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
+L++GF+++GM+ EA VL +++ G+ P + ++ R+G + K+F + +
Sbjct: 286 TSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEK 345
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+ P TF ++ C + + H G D D T N+L N + G S
Sbjct: 346 RKLVPDQYTFASILSSLCLSGKFDLVPRITH---GIGTDFDLVTGNLLSNCFSKIGYNSY 402
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGN----------VIEARK---------VFD 176
A+ L++M T++ + ALCR G +I+ +K + D
Sbjct: 403 ALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIID 462
Query: 177 RIQDMGIAPNTTI-----------------YNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
+ ++G NT + Y + G V+A+ I +A L +M+ G+
Sbjct: 463 SLIELG-KYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIY 521
Query: 220 PDCVTFNILVGG 231
P+ T+ ++ G
Sbjct: 522 PNRRTYRTIISG 533
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 3/206 (1%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
VL RM G P+ + RL R G +++ M+ G S +++++ GF
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 94 RQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMA 153
R L + M + GC P+ TY LI + G A L+ + G P +
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 154 TFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM 213
+ ++H R G EARKVF ++ + P+ + +++ + G+ +++
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLS---GKFDLVPRIT 375
Query: 214 RGKGVSPDCVTFNILVGGHYKYGRNG 239
G G D VT N+L K G N
Sbjct: 376 HGIGTDFDLVTGNLLSNCFSKIGYNS 401
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 79/165 (47%)
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
GD V + K M+ +G P+ F ++ CR + ++ LM G +
Sbjct: 191 GDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVW 250
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
++L++ + G+ A+D N M++ GC P++ T+++++ G V EA V ++Q
Sbjct: 251 SMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQS 310
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
G+AP+ + N ++ Y + +A ++ + + + PD TF
Sbjct: 311 EGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 3/214 (1%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
++R G + EA V+ M G+ S++ ++L R G+ LF M++ G
Sbjct: 218 ILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIG 277
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P+ VT+ +I GF + ++L + G PD N++I+ Y G+ A
Sbjct: 278 CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEAR 337
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+ K P TF++I+ +LC G ++ +G + N L + +
Sbjct: 338 KVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI---THGIGTDFDLVTGNLLSNCF 394
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
K A + M K + DC T+ + +
Sbjct: 395 SKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSA 428
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 4/196 (2%)
Query: 22 FLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPS 81
F VG +F++L + M+ G+ P + L +L R + KL K + +G +P
Sbjct: 304 FSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPD 363
Query: 82 SVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLN 141
SVT+N MI C L V ++L M P T++ + A + V L
Sbjct: 364 SVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEV----LG 419
Query: 142 MMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAR 201
M + P+ TF I+ L + A K++ + I N +Y + G +
Sbjct: 420 QMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCG 479
Query: 202 EIGQANMLYEEMRGKG 217
+ +A +Y EM+ KG
Sbjct: 480 WLEKAREIYSEMKSKG 495
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 60 VGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK-FGCDPDAF 118
D + F M + P F ++C CR + E + K F D + F
Sbjct: 202 ANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGF 261
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGC-EPSMATFSTIMHALCREGNVIEARKVFDR 177
N+++N +C + M N C P+ ++S ++ + GN+ ++ +++D
Sbjct: 262 --NVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDE 319
Query: 178 IQDMGIAPNTTIYNTLMDGYVKARE--IGQANMLYEEMRGKGVSPDCVTFNILV 229
++ G+AP +YN+L+ YV RE +A L +++ +G+ PD VT+N ++
Sbjct: 320 MKKRGLAPGIEVYNSLV--YVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 5/204 (2%)
Query: 11 DFSVLNTLMRGFLNVGM-IFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
D N ++ G+ N+ + EA + M + + P+ + + + +VG+ +L
Sbjct: 257 DVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRL 316
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
+ +M ++G P +N ++ R+ L+ + + G PD+ TYN +I C
Sbjct: 317 YDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCE 376
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
GK VA + L M+ P++ TF HA N + +V +++ + P
Sbjct: 377 AGKLDVARNVLATMISENLSPTVDTF----HAFLEAVNFEKTLEVLGQMKISDLGPTEET 432
Query: 190 YNTLMDGYVKAREIGQANMLYEEM 213
+ ++ K ++ A ++ EM
Sbjct: 433 FLLILGKLFKGKQPENALKIWAEM 456
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 85 FNVMICGFCR-QQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMM 143
FNV++ G+C + + + M + P+ +Y+ +I+ + G ++ + M
Sbjct: 261 FNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEM 320
Query: 144 MKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREI 203
K G P + ++++++ L RE EA K+ ++ + G+ P++ YN+++ +A ++
Sbjct: 321 KKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKL 380
Query: 204 GQANMLYEEMRGKGVSPDCVTFNILV 229
A + M + +SP TF+ +
Sbjct: 381 DVARNVLATMISENLSPTVDTFHAFL 406
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 55/255 (21%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITI--LFRLLLRVGDYGSV 66
+SD N + ++ G EAL V RM P S+++ + LR G++
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRM------PRWSSVSYNGMISGYLRNGEFELA 114
Query: 67 WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKF--------------- 111
KLF +M P V++NVMI G+ R + L L +MP+
Sbjct: 115 RKLFDEM----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN 170
Query: 112 GCDPDA------------FTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIM 159
GC DA ++N L++AY K M+ M+ K+ ++ +++ ++
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSK----MEEACMLFKSRENWALVSWNCLL 226
Query: 160 HALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
++ ++EAR+ FD + + +NT++ GY ++ +I +A L++E S
Sbjct: 227 GGFVKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDE------S 276
Query: 220 P--DCVTFNILVGGH 232
P D T+ +V G+
Sbjct: 277 PVQDVFTWTAMVSGY 291
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 10 SDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKL 69
D ++ G++ M+ EA ++ +M P + ++ + +L G ++
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKM------PERNEVS--WNAMLAGYVQGERMEM 330
Query: 70 FKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCI 129
K++ P + T+N MI G+ + + ++L MPK D ++ +I Y
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK----RDPVSWAAMIAGYSQ 386
Query: 130 KGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIE-ARKVFDRIQDMGIAPNTT 188
G + A+ M + G + ++FS+ + + C + +E +++ R+ G
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSAL-STCADVVALELGKQLHGRLVKGGYETGCF 445
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ N L+ Y K I +AN L++EM GK D V++N ++ G+ ++G
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHG 489
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 11/213 (5%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE+ V N L+ + G I EA D+ M + + + R G
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEM----AGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLV-VGESLLHLMPK-FGCDPDAFTYNILIN 125
+ F+ M R+G +P T V + C GLV G + M + +G P++ Y +++
Sbjct: 496 RFFESMKREGLKPDDATM-VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAP 185
+ G+ + D N+M EP A + T++ A GN A D+I M
Sbjct: 555 ---LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAME-PE 610
Query: 186 NTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
N+ +Y L + Y + G L MR KGV
Sbjct: 611 NSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V N+L+ +V M A ++ RM G++P IL G + +M
Sbjct: 184 VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM 243
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
R+G P + +++I G L + ++ M K G PD T+NILI A G+
Sbjct: 244 SRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV 303
Query: 134 SVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTL 193
++ K G + T+ T++ A+ + G + EA ++ + + G P ++Y +
Sbjct: 304 EFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPI 363
Query: 194 MDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+ G + A + +M+ K P+ + +L+
Sbjct: 364 IKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI 399
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 108/249 (43%), Gaps = 16/249 (6%)
Query: 4 NHNEYESDFSVLNTLMRGFLNV---------------GMIFEALDVLHRM-RDVGVRPSL 47
+H +YES + +L + L++ G + +A+++ + + + +G + ++
Sbjct: 123 SHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTV 182
Query: 48 SAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHL 107
L L V + + L + M+RKG +P T+ +++ G+C + + L
Sbjct: 183 DVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDE 242
Query: 108 MPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGN 167
M + G +P A ++LI G A + ++ M K G P + TF+ ++ A+ + G
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 168 VIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNI 227
V +++ +G+ + Y TL+ K +I +A L G P +
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 362
Query: 228 LVGGHYKYG 236
++ G + G
Sbjct: 363 IIKGMCRNG 371
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK-GPRPSSVTFNVMICGF 92
+L +M+D+ + S + + + G +LF + + G + + +N ++
Sbjct: 133 ILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHAL 192
Query: 93 CRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSM 152
C + +L+ M + G PD TY IL+N +C GK A ++L+ M + G P
Sbjct: 193 CDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPA 252
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
++ L G + A+++ ++ G P+ +N L++ K+ E+ +Y
Sbjct: 253 RGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYT 312
Query: 213 MRGKGVSPDCVTFNILVGGHYKYGRNGE 240
G+ D T+ L+ K G+ E
Sbjct: 313 ACKLGLCVDIDTYKTLIPAVSKIGKIDE 340
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 51 TILFRLLLRVGDYGSVWKLFKDM----LRKGPRPSSVTFNVMICGFCRQQGLVVGESL-- 104
TI + + ++ +G ++L ++M ++ G ++T++ +I C ++ + +++
Sbjct: 186 TIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIIT--CAKRCNLYNKAIEW 243
Query: 105 LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR 164
M K G PD TY+ +++ Y GK + + G +P FS +
Sbjct: 244 FERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGE 303
Query: 165 EGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVT 224
G+ R V ++ M + PN +YNTL++ +A + G A L+ EM G++P+ T
Sbjct: 304 AGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKT 363
Query: 225 FNILVG--GHYKYGRNG 239
LV G ++ R+
Sbjct: 364 LTALVKIYGKARWARDA 380
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%)
Query: 59 RVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAF 118
R Y + F+ M + G P VT++ ++ + + + SL G PDA
Sbjct: 233 RCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAI 292
Query: 119 TYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI 178
+++L + G L M +P++ ++T++ A+ R G AR +F+ +
Sbjct: 293 AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 352
Query: 179 QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
+ G+ PN L+ Y KAR A L+EEM+ K D + +N L+
Sbjct: 353 LEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN 404
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 10/227 (4%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
V NTL+ G A + + M + G+ P+ +T L ++ + +L+++M
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVV-GESLLHLMPK-FGCDPDAFTYNILINAYCIKG 131
K + +N ++ C GL E L + M + C PD F+Y ++N Y G
Sbjct: 388 KAKKWPMDFILYNTLL-NMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGG 446
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
K AM+ M+K G + ++ + ++ L + + + VFD G+ P+ +
Sbjct: 447 KAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCG 506
Query: 192 TLMD--GYVKAREIGQANMLYEEMRGKGVSPDCVTF-NILVGGHYKY 235
L+ ++ E + M E K + VTF N++V +Y
Sbjct: 507 CLLSVMALCESSEDAEKVMACLERANKKL----VTFVNLIVDEKTEY 549
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 1/189 (0%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
VL M+ + V+P++ L + R G G LF +ML G P+ T ++ +
Sbjct: 313 VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYG 372
Query: 94 RQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN-GCEPSM 152
+ + L M D YN L+N G A N M ++ C P
Sbjct: 373 KARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDN 432
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
+++ +++ G +A ++F+ + G+ N L+ KA+ I +++
Sbjct: 433 FSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDL 492
Query: 213 MRGKGVSPD 221
+GV PD
Sbjct: 493 SIKRGVKPD 501
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 110/226 (48%), Gaps = 13/226 (5%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
NTL +G++ + FE+L + +MRD+GVRP + + + ++GD+ + L +++
Sbjct: 78 NTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVK 137
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK-GKTS 134
G + ++ + + L E L M D +N + A C++ G ++
Sbjct: 138 YGFGCLGIVATELVMMYMKFGELSSAEFLFESMQV----KDLVAWNAFL-AVCVQTGNSA 192
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
+A+++ N M + + T +++ A + G++ +++DR + I N + N +
Sbjct: 193 IALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARL 252
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
D ++K A +L+EEM+ + V V+++ ++ G Y NG+
Sbjct: 253 DMHLKCGNTEAARVLFEEMKQRNV----VSWSTMIVG---YAMNGD 291
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 9 ESDFSVL-NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
+ D SVL N L+ G+ + +AL V +MR+ GV S IT + GD +
Sbjct: 223 DRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGR 282
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYN--ILIN 125
+ ++ G V N +I + + + L S+ M + D FT+N + ++
Sbjct: 283 SIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD----ERDLFTWNSVLCVH 338
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI-- 183
YC ++A+ M+ +G P + T +T++ R ++ + R++ + G+
Sbjct: 339 DYCGDHDGTLAL--FERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLN 396
Query: 184 --APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+ N I+N+LMD YVK ++ A M+++ MR K D ++NI++ G+
Sbjct: 397 RKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK----DSASWNIMINGY 443
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 54/211 (25%)
Query: 48 SAITILFRLLLRVGDYGSVWKLFKDMLRKG-----PRPSSVTFNVMI-CGFCRQQGLVVG 101
+ I L R R DY S ++ M+RKG PR + N+ CG R+ LV G
Sbjct: 62 TCIATLQRCAQR-KDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG 120
Query: 102 ESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIM-- 159
G + D F YN LI+ + + G AM+ M NG P TF +++
Sbjct: 121 ----------GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG 170
Query: 160 ------------HAL---------CREG-----------NVIEARKVFDRIQDMGIAPNT 187
H L C G +V +A+KVFD + D ++
Sbjct: 171 SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDR---DDS 227
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
++N L++GY + A +++ +MR +GV
Sbjct: 228 VLWNALVNGYSQIFRFEDALLVFSKMREEGV 258
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 5/199 (2%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
TL+ GF EA D+ +M + P+ + + +G + M+R
Sbjct: 281 TTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIR 340
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
G +V F I + R + + ++ +MP + + +++ +INA+ I G
Sbjct: 341 NGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP----ERNVISWSSMINAFGINGLFEE 396
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI-QDMGIAPNTTIYNTLM 194
A+D + M P+ TF +++ A GNV E K F+ + +D G+ P Y ++
Sbjct: 397 ALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMV 456
Query: 195 DGYVKAREIGQANMLYEEM 213
D +A EIG+A + M
Sbjct: 457 DLLGRAGEIGEAKSFIDNM 475
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 107/271 (39%), Gaps = 57/271 (21%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
T+++ F + M AL V M+ VGV P+ + L G LF++ML
Sbjct: 379 TIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLAS 438
Query: 77 GPRPSSVTFNVMI------CGFCRQ-------QGLVVGESL------------------- 104
G P+S FN+++ C + R +G V ESL
Sbjct: 439 GCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKN 498
Query: 105 ---------------LHLMPKFGCDPDAFTYNILINAYC----IKGKTSVAMDWLNMMMK 145
+ +F P TYNIL+ A C +GK + ++ M
Sbjct: 499 NGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDYYRGK-----ELMDEMKS 552
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQ 205
G P+ T+ST++ G+V A ++ + G P+ Y T + + + +
Sbjct: 553 LGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKL 612
Query: 206 ANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
A L+EEMR + P+ VT+N L+ KYG
Sbjct: 613 AFSLFEEMRRYQIKPNWVTYNTLLKARSKYG 643
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 6/220 (2%)
Query: 14 VLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDM 73
+L ++ GF G + + + + P++ + + GDY +++D+
Sbjct: 234 LLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDL 293
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L++ +P+ N ++ G + + M D +YNIL+ C+ G+
Sbjct: 294 LKENIKPNIYVINSLMNVNSHDLGYTL--KVYKNMQILDVTADMTSYNILLKTCCLAGRV 351
Query: 134 SVAMD---WLNMMMKNGCEPSMA-TFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTI 189
+A D M +G A T+ TI+ A KV D ++ +G+ PNT
Sbjct: 352 DLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHT 411
Query: 190 YNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
+++L+ A + QAN L+EEM G P+ FNIL+
Sbjct: 412 WSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILL 451
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 99/259 (38%), Gaps = 58/259 (22%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFK---- 71
++L+ N G++ +A + M G P+ IL + Y ++LF+
Sbjct: 413 SSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKG 472
Query: 72 ----------DMLRKGP---------------------------------RPSSVTFNVM 88
D++ KG +P++ T+N++
Sbjct: 473 SSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNIL 532
Query: 89 I--CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN 146
+ CG G+ L+ M G P+ T++ LI+ G A+ L M
Sbjct: 533 LKACG----TDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSA 588
Query: 147 GCEPSMATFSTIMHALCREGNVIE-ARKVFDRIQDMGIAPNTTIYNTLMDG---YVKARE 202
G P + ++T + +C E ++ A +F+ ++ I PN YNTL+ Y E
Sbjct: 589 GTRPDVVAYTTAIK-ICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLE 647
Query: 203 IGQANMLYEEMRGKGVSPD 221
+ Q +Y++MR G P+
Sbjct: 648 VRQCLAIYQDMRNAGYKPN 666
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 51 TILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPK 110
T L + ++ G K+F K P V++ +I G+ + + + L +P
Sbjct: 173 TSLISMYVQNGRLEDAHKVFD----KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 111 FGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIE 170
D ++N +I+ Y G A++ MMK P +T T++ A + G++
Sbjct: 229 ----KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 284
Query: 171 ARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
R+V I D G N I N L+D Y K E+ A L+E + K D +++N L+G
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIG 340
Query: 231 GH 232
G+
Sbjct: 341 GY 342
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 8/193 (4%)
Query: 44 RPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGES 103
P+L +FR D S KL+ M+ G P+S TF ++ + + G+
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 104 LLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALC 163
+ + K GCD D + + LI+ Y G+ A + + + +++ ++
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA----HKVFDKSPHRDVVSYTALIKGYA 211
Query: 164 REGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCV 223
G + A+K+FD I + +N ++ GY + +A L+++M V PD
Sbjct: 212 SRGYIENAQKLFDEIP----VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 224 TFNILVGGHYKYG 236
T +V + G
Sbjct: 268 TMVTVVSACAQSG 280
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 98/241 (40%), Gaps = 28/241 (11%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D N ++ G++N G EAL + MRD G P + I L +GD + +
Sbjct: 237 EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKR 296
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGC------------DPD 116
L +L SS+ G + +L+ + K G D D
Sbjct: 297 LHIYILETASVSSSIYV-----------GTPIWNALIDMYAKCGSIDRAIEVFRGVKDRD 345
Query: 117 AFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFD 176
T+N LI + +++ M + P+ TF ++ A G V E RK F
Sbjct: 346 LSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFS 404
Query: 177 RIQDM-GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
++DM I PN Y ++D +A ++ +A M E M+ + P+ + + L+G Y
Sbjct: 405 LMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK---IEPNAIVWRTLLGACKIY 461
Query: 236 G 236
G
Sbjct: 462 G 462
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 19/231 (8%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D + N+LM + +G + EA V M++ + S+S +++ L+ R ++
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN---KDSVSWNSLITGLVQR-KQISEAYE 362
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
LF+ M P V++ MI GF + + L +MP + D T+ +I+A+
Sbjct: 363 LFEKM----PGKDMVSWTDMIKGFSGKGEISKCVELFGMMP----EKDNITWTAMISAFV 414
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
G A+ W + M++ P+ TFS+++ A ++IE ++ R+ M I + +
Sbjct: 415 SNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLS 474
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNG 239
+ N+L+ Y K A ++ + P+ V++N ++ G Y NG
Sbjct: 475 VQNSLVSMYCKCGNTNDAYKIFSCIS----EPNIVSYNTMISG---YSYNG 518
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 17 TLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRK 76
++ + G + +A V M VR + S ++ ++ D G ++LF D+
Sbjct: 86 AMISAYAENGKMSKAWQVFDEM---PVRVTTSYNAMITAMIKNKCDLGKAYELFCDI--- 139
Query: 77 GPRPSSVTFNVMICGFCRQQGLVVGESLLHLMP-KFGCDPDAFTYNILINAYCIKGKTSV 135
P ++V++ MI GF R E L P KF D+ N+L++ Y GK +
Sbjct: 140 -PEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKF---RDSVASNVLLSGYLRAGKWNE 195
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A+ M + + S+++H C+ G +++AR +FDR+ + N + ++D
Sbjct: 196 AVRVFQGM----AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWTAMID 247
Query: 196 GYVKAREIGQANMLYEEMRGKG 217
GY KA L+ MR +G
Sbjct: 248 GYFKAGFFEDGFGLFLRMRQEG 269
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW---KLFKD 72
N+L+ G+ +G +A+ + +M + GV+P R+L G GSV + +D
Sbjct: 164 NSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFP---RVLKACGGIGSVQIGEAIHRD 220
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
++++G N ++ + + +V ++ ++P D ++N ++ Y G
Sbjct: 221 LVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH----KDYVSWNSMLTGYLHHGL 276
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
A+D +M++NG EP S++ L R + R++ + G+ ++ N
Sbjct: 277 LHEALDIFRLMVQNGIEPDKVAISSV---LARVLSFKHGRQLHGWVIRRGMEWELSVANA 333
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
L+ Y K ++GQA ++++M + D V++N ++ H K
Sbjct: 334 LIVLYSKRGQLGQACFIFDQM----LERDTVSWNAIISAHSK 371
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D+ N+++ G+L+ G++ EALD+ M G+ P AI+ +L RV + +L
Sbjct: 260 DYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS---SVLARVLSFKHGRQLH 316
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQ----QGLVVGESLLHLMPKFGCDPDAFTYNILINA 126
++R+G N +I + ++ Q + + +L + D ++N +I+A
Sbjct: 317 GWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQML--------ERDTVSWNAIISA 368
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI-QDMGIAP 185
+ K S + + M + +P TF +++ G V + ++F + ++ GI P
Sbjct: 369 H---SKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDP 425
Query: 186 NTTIYNTLMDGYVKAREIGQA-NMLYEEM 213
Y +++ Y +A + +A +M+ +EM
Sbjct: 426 KMEHYACMVNLYGRAGMMEEAYSMIVQEM 454
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 49 AITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLM 108
A + F + +V D +V F+ +L+ R SS ++V++ + + + G+ L+ M
Sbjct: 403 AAILAFGKIDKVKDAEAV---FEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQM 459
Query: 109 PKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG-CEPSMATFSTIMHALCREGN 167
GC+ A T++ +I Y G+ A L+ +++ +P M++F +MH R G+
Sbjct: 460 SDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGD 519
Query: 168 VIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
V K+F R++ G Y TL+ YV A+ A + E M+ + P+
Sbjct: 520 VHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAK--APAYGMKERMKADNIFPN 571
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 15/214 (7%)
Query: 33 DVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG--PRPSSVT--FNVM 88
DVL + R G + T L ++ V F ML P+P + +V+
Sbjct: 105 DVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVL 164
Query: 89 IC--GFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN 146
+ G+ ++ + S LH G P+ +YN+L+ A+C+ S+A M++
Sbjct: 165 VSHRGYLQKAFELFKSSRLH-----GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 147 GCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQA 206
P + ++ ++ CR+G V A ++ D + + G P+ T+ L D + +
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGLCDQGM----FDEG 275
Query: 207 NMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
EEM KG SP N LV G +G+ E
Sbjct: 276 KKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 309
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 8/213 (3%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N LM+ F + A + +M + V P + + IL + R G +L DML
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
KG P +I G C Q G+ L M G P N L+ +C GK
Sbjct: 254 KGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 309
Query: 136 AMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
A D + ++MKNG T+ ++ +C E + + + I +T I + ++
Sbjct: 310 ACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIE 369
Query: 196 GYVKAREIGQANMLYEEMRGKGV---SPDCVTF 225
K EI Q + E + V +P+ + +
Sbjct: 370 NK-KMPEIEQDDAAAETVDSSTVKFGTPEALEY 401
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 4/157 (2%)
Query: 26 GMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTF 85
G + +A ++ R GV P+ + +L + D ++LF ML + P ++
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 86 NVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMK 145
++I GFCR+ + LL M G PD LI C +G +L M+
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 146 NGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
G P + + ++ C G V EA V + + G
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 106/266 (39%), Gaps = 37/266 (13%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYG---- 64
E + L+ +R + + AL++ MR +G++P+ A LLR GD
Sbjct: 104 ERNEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFT 163
Query: 65 ------------------------------SVWKLFKDMLRKGPRPSS---VTFNVMICG 91
S ++F+++ R+ R S V +N I
Sbjct: 164 VFEFMRKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISL 223
Query: 92 FCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPS 151
R + E + +M G TY++L++ + G++ +A+D + M+ N
Sbjct: 224 CGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLR 283
Query: 152 MATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYE 211
++ A +E A K+F + G+ PN NTL++ KA ++G +Y
Sbjct: 284 EDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYS 343
Query: 212 EMRGKGVSPDCVTFNILVGGHYKYGR 237
++ G PD T+N L+ YK R
Sbjct: 344 VLKSLGHKPDEYTWNALLTALYKANR 369
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 45/245 (18%)
Query: 31 ALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMIC 90
AL + M G++P+L A L L + G G V+K++ + G +P T+N ++
Sbjct: 303 ALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLT 362
Query: 91 GF-----------------------------------CRQQGL-VVGESLLHLMPKFGCD 114
C++ G LL+ M G
Sbjct: 363 ALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLT 422
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV 174
+YN++I+A K+ VA+ M + C+P+ T+ +++ + C G++
Sbjct: 423 VSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGSL------ 475
Query: 175 FDRIQDM--GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
+D ++D+ + P+ ++YN + G RE A LY +MR G+ PD T +++
Sbjct: 476 WDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNL 535
Query: 233 YKYGR 237
K+ +
Sbjct: 536 KKHQK 540
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 5/215 (2%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L+ F+ G ALDV M + + A+ + + + K+F+ ML+KG
Sbjct: 255 LVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKG 314
Query: 78 PRPSSVTFNVMI--CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSV 135
+P+ V N +I G + GLV + ++ G PD +T+N L+ A +
Sbjct: 315 MKPNLVACNTLINSLGKAGKVGLVF--KVYSVLKSLGHKPDEYTWNALLTALYKANRYED 372
Query: 136 AMDWLNMMM-KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
+ +M+ +N C + ++T M + + G +A K+ ++ G+ +T+ YN ++
Sbjct: 373 VLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVI 432
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILV 229
K+R+ A ++YE M + P+ T+ LV
Sbjct: 433 SACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 43 VRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGE 102
+ ++A + + +G G V + F + P+ TF++++ R+ + G
Sbjct: 121 LEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR 180
Query: 103 SLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVA---MDWLNMMMKNGCEPSMATFSTIM 159
+ M K G + +++ L++ Y + S A +W+ +P+ ++ +
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI-------VDPNTVCWTCLF 233
Query: 160 HALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
+ G EA VF+R++D G P+ + T+++ Y++ ++ A +L+ EM S
Sbjct: 234 SGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----S 289
Query: 220 PDCVTFNILVGGHYKYG 236
PD V +N+++ GH K G
Sbjct: 290 PDVVAWNVMISGHGKRG 306
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 8/213 (3%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKG 77
L G++ G+ EA+ V RMRD G RP A + +R+G LF +M
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM---- 287
Query: 78 PRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAM 137
P V +NVMI G ++ V M K T +++A I + +
Sbjct: 288 SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Query: 138 DWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGY 197
+K G ++ S+++ + + A KVF+ +++ N +N ++ GY
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE----KNDVFWNAMIRGY 403
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVG 230
E + L+ +M+ G + D TF L+
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKV 174
P+ FT++I+++ + M+K G E + ++ + + +AR+V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 175 FDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYK 234
F+ I D PNT + L GYVKA +A +++E MR +G PD + F ++ + +
Sbjct: 218 FEWIVD----PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIR 273
Query: 235 YGR 237
G+
Sbjct: 274 LGK 276
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 65.5 bits (158), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 57 LLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLL-HLMPKFGCDP 115
L+R D + KL + + RP+ T N +I R + SL + + P
Sbjct: 155 LIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVP 214
Query: 116 DAFTYNILINAYCIKGKTSVAMDWLNMMMKNG-CEPSMATFSTIMHALCREGNVIEARKV 174
+ +YN +INA+C +G A++ ++ N PS T+ + L + G + +A +
Sbjct: 215 NVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASL 274
Query: 175 FDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
+ G A ++T+YN L+ GY+ + +A ++E++ K C ++ +V +
Sbjct: 275 LREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK-----CTVYDGIVNATF 328
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 115 PDAFTYNILINAYCIKGKTSVAMDWLNMMMK-NGCEPSMATFSTIMHALCREGNVIEARK 173
P FT N +I A + S ++ K + P++ +++ I++A C EGNV EA +
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 174 VFDRI-QDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGH 232
V+ I + AP++ Y L G V+A IG A L EM KG + D +N L+ G+
Sbjct: 238 VYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 233 YKYG 236
G
Sbjct: 298 LDLG 301
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 18/228 (7%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D + NTL+ + G+ EAL + + M+ GV P++ ++ LLR G
Sbjct: 438 EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 69 LFKDMLRKGPRPSSVTFNVMICGF----CRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+F M G P+ +++ M+ G C ++ ++ L M + G P+AF+ + +
Sbjct: 498 MFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAIL----FLRKMQESGLRPNAFSITVAL 553
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTI---MHALCREGNVIEARKVFDRIQDM 181
+A + +++N S+ + T M+A C G++ +A KVF
Sbjct: 554 SACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKC--GDINKAEKVFGS---- 607
Query: 182 GIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF-NIL 228
+ + N ++ Y + +A LY + G G+ PD +T N+L
Sbjct: 608 KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVL 655
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 109/261 (41%), Gaps = 45/261 (17%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPS-------LSAI------------------ 50
N LM G++ G EA+ + MR GV P+ LSA
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 51 ----------TILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVV 100
T L +VG +F M K VT+N++I G+ QQGLV
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYV-QQGLVE 357
Query: 101 GE-SLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIM 159
+ LM D T L++A + + +++ E + ST+M
Sbjct: 358 DAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVM 417
Query: 160 HALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVS 219
+ G++++A+KVFD + + ++NTL+ Y ++ G+A L+ M+ +GV
Sbjct: 418 DMYAKCGSIVDAKKVFDST----VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVP 473
Query: 220 PDCVTFNILVGGHYKYGRNGE 240
P+ +T+N+++ + G+ E
Sbjct: 474 PNVITWNLIILSLLRNGQVDE 494
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 9/232 (3%)
Query: 6 NEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGS 65
+ +ESD + +T+M + G I +A V D V L L G G
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVF----DSTVEKDLILWNTLLAAYAESGLSGE 459
Query: 66 VWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILIN 125
+LF M +G P+ +T+N++I R + + + M G P+ ++ ++N
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Query: 126 AYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR-IQDMGIA 184
G + A+ +L M ++G P+ + + + A ++ R + I+++ +
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHS 579
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+I +L+D Y K +I +A E++ G + + N ++ + YG
Sbjct: 580 SLVSIETSLVDMYAKCGDINKA----EKVFGSKLYSELPLSNAMISAYALYG 627
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Query: 114 DPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARK 173
D +A +N L+ Y GK A+ + M K G EP+ T ST + A G V E ++
Sbjct: 236 DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
Query: 174 VFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHY 233
G+ + + +L++ Y K I A M+++ M K D VT+N+++ G+
Sbjct: 296 SHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYV 351
Query: 234 KYG 236
+ G
Sbjct: 352 QQG 354
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 1/197 (0%)
Query: 34 VLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFC 93
+L +M G+ P + T L + + G++ + F+++ G RP + MI G+
Sbjct: 406 ILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYV 465
Query: 94 RQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEP-SM 152
+GE L+ M Y L+ AY G + A + M P S
Sbjct: 466 NAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSF 525
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
+S + A + G V +A+ FD ++ +G P+ L+ Y + +A L +
Sbjct: 526 EAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQ 585
Query: 213 MRGKGVSPDCVTFNILV 229
+ G+ +T+ +LV
Sbjct: 586 LEKDGIEIGVITYTVLV 602
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%)
Query: 120 YNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQ 179
Y+ LI+ + + L M +NG P + T + ++H + GN A + F+ ++
Sbjct: 387 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLK 446
Query: 180 DMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
G+ P+ IY ++ GYV A + L +EM+ K + + L+ + + G
Sbjct: 447 SYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMG 503
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 17/225 (7%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
N ++ G+ G EA+D+ H M + VRP +IT +VG +++ + R
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 76 KGPRPSSVTFNVMI-----CGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
R + +I CG LV +L D D ++ +I Y +
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL---------DRDVVVWSAMIVGYGLH 402
Query: 131 GKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIY 190
G+ A+ M + G P+ TF ++ A G V E F+R+ D I P Y
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHY 462
Query: 191 NTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKY 235
++D +A + QA YE ++ V P + L+ K+
Sbjct: 463 ACVIDLLGRAGHLDQA---YEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/228 (17%), Positives = 96/228 (42%), Gaps = 14/228 (6%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLR 75
++ + G EAL++ +MR + V+P A+ + + D + +++
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 76 KGPRPSS---VTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
G ++ N M + + + + L M P+ +N +I+ Y G
Sbjct: 251 MGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGY 303
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNT 192
A+D + M+ P + ++ + A + G++ +AR +++ + + I +
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 193 LMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
L+D + K + A ++++ + + D V ++ ++ G+ +GR E
Sbjct: 364 LIDMFAKCGSVEGARLVFD----RTLDRDVVVWSAMIVGYGLHGRARE 407
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 3/163 (1%)
Query: 33 DVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGF 92
++ +M++ G+ P+ A + L + G KLF M KG P V + ++ F
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 93 CRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSM 152
C+ + + + M G P+AF+Y +L+ A+ + + M+++G P++
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
TF ++ ALCR V +A+ D + G A N MD
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 157 TIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
++ LC++G V EA K+F ++D G P IY +++ + KA +I A ++ +M+
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 217 GVSPDCVTFNILVGGHY 233
G++P+ ++ +LV G Y
Sbjct: 196 GIAPNAFSYGVLVQGLY 212
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 101 GESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
+ + M + G P+A +++ C G AM +M G P + ++ ++
Sbjct: 118 SDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
A C+ + +A+++F ++Q+ GIAPN Y L+ G + A EM G SP
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSP 234
Query: 221 DCVTFNILV 229
+ TF LV
Sbjct: 235 NVPTFVELV 243
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 3/163 (1%)
Query: 33 DVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGF 92
++ +M++ G+ P+ A + L + G KLF M KG P V + ++ F
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 93 CRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSM 152
C+ + + + M G P+AF+Y +L+ A+ + + M+++G P++
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
TF ++ ALCR V +A+ D + G A N MD
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 157 TIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
++ LC++G V EA K+F ++D G P IY +++ + KA +I A ++ +M+
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 217 GVSPDCVTFNILVGGHY 233
G++P+ ++ +LV G Y
Sbjct: 196 GIAPNAFSYGVLVQGLY 212
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 101 GESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
+ + M + G P+A +++ C G AM +M G P + ++ ++
Sbjct: 118 SDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
A C+ + +A+++F ++Q+ GIAPN Y L+ G + A EM G SP
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSP 234
Query: 221 DCVTFNILV 229
+ TF LV
Sbjct: 235 NVPTFVELV 243
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 110/233 (47%), Gaps = 21/233 (9%)
Query: 4 NHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDY 63
N+ Y FS L+ L+ G + A +L ++ G + T L + G
Sbjct: 34 NYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYL 93
Query: 64 GSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNIL 123
LF+ M P + VT N M+ G+ + + + +L MPK + ++ ++
Sbjct: 94 DEARVLFEVM----PERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVM 144
Query: 124 INAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGI 183
+ A C G++ A++ + M E ++ +++T++ L R G++ +A++VFD + +
Sbjct: 145 LTALCDDGRSEDAVELFDEMP----ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV 200
Query: 184 APNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+N ++ GY++ + +A +L+ +M K V VT+ +V G+ +YG
Sbjct: 201 VS----WNAMIKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMVYGYCRYG 245
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 98/228 (42%), Gaps = 35/228 (15%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D N ++ +L G + A + R++ + + S +++ + L GD + LF
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGY---LEAGDVSRAFGLF 423
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINA---- 126
+ + K VT+ VMI G + + SLL M + G P TY++L+++
Sbjct: 424 QKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGAT 479
Query: 127 ---------YCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR 177
+C+ KT+ D P + ++++ + G + +A ++F +
Sbjct: 480 SNLDQGKHIHCVIAKTTACYD-----------PDLILQNSLVSMYAKCGAIEDAYEIFAK 528
Query: 178 IQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
+ + +T +N+++ G +A L++EM G P+ VTF
Sbjct: 529 M----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTF 572
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 1/217 (0%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDV-GVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
N +R + G + D L ++ + G + + LL+ + V+ + +M+
Sbjct: 325 NIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMM 384
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
+G P+ T N +C FC+ + L + G P A +YN LI+ C
Sbjct: 385 VRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVE 444
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A D L + G TFST+ +ALC +G AR++ + + P ++
Sbjct: 445 QAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKII 504
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
++ A M+ E GV F L+ G
Sbjct: 505 SALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYG 541
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 14/218 (6%)
Query: 18 LMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILF--RLLLRVGDYGSVWKLFKDMLR 75
++ +VG + +AL + GV S T L + L GD + KL M
Sbjct: 503 IISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAA--KLIIRMQE 560
Query: 76 KGPRPSSVTFNVMICGFCRQQGLVVGE-SLLHLMPKFGC---DPDAFTYNILINAYCIKG 131
KG P+ + +I C + GE + + KF + YN+ I G
Sbjct: 561 KGYTPTRSLYRNVIQCVCEMES---GEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAG 617
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
K +A +MM ++G P++A+ ++ + + + +A F +++ G +Y
Sbjct: 618 KPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQ 676
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSP--DCVTFNI 227
++ G KA ++ A EEM+G+G+ P +C NI
Sbjct: 677 VMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNI 714
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 76/188 (40%)
Query: 33 DVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGF 92
D+L M GV P+ + + G +L++ G P+++++N +I
Sbjct: 378 DILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTL 437
Query: 93 CRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSM 152
C + + +L G T++ L NA C KGK +A + + + P
Sbjct: 438 CANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKR 497
Query: 153 ATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEE 212
I+ ALC G V +A + + G+ + ++ +L+ G + A L
Sbjct: 498 IAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIR 557
Query: 213 MRGKGVSP 220
M+ KG +P
Sbjct: 558 MQEKGYTP 565
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 103 SLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
SL M G PD F N++I AY + A+ M G EP+ T+S ++ +
Sbjct: 209 SLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGV 268
Query: 163 CREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDC 222
C +G V + + +Q G+ PN + Y L+ R + +A + +M +SPD
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDM 328
Query: 223 VTFNILVGGHYKYGRNGE 240
+T+N ++ + GR E
Sbjct: 329 LTYNTVLTELCRGGRGSE 346
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%)
Query: 37 RMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQ 96
+M+ GV P + ++ + + + ++FK+M G P++ T++ ++ G C +
Sbjct: 213 QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKG 272
Query: 97 GLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFS 156
+ G M G P+ Y +LI + ++ + A++ + M+ N P M T++
Sbjct: 273 RVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYN 332
Query: 157 TIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMD 195
T++ LCR G EA ++ + + Y TLMD
Sbjct: 333 TVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%)
Query: 65 SVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILI 124
+V L K M G P + N++I + + + + M +G +P+A+TY+ L+
Sbjct: 206 AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLV 265
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
C KG+ + + M G P+ + + ++ +L E + EA +V + ++
Sbjct: 266 KGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGK 216
P+ YNT++ + +A + EE + +
Sbjct: 326 PDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
D VLN +++ + + EA+ V M G P+ + L + + G G +
Sbjct: 222 DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY 281
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIK 130
K+M KG P+ + V+IC ++ L +++ M PD TYN ++ C
Sbjct: 282 KEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRG 341
Query: 131 GKTSVAMD 138
G+ S A++
Sbjct: 342 GRGSEALE 349
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 102 ESLLHLMPKFGCDPDAFTYNILINAYC-IKGKTSVAMDWLNMMMK-NGCEPSMATFSTIM 159
E+L+ + C+ YN +I C K + A D N M++ + +P + T++ ++
Sbjct: 128 ETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLL 187
Query: 160 HALCREGNVIEA--------RKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYE 211
+L + N + R + +++ G+ P+T + N ++ Y K E+ +A +++
Sbjct: 188 SSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFK 247
Query: 212 EMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
EM G P+ T++ LV G + GR G+
Sbjct: 248 EMALYGSEPNAYTYSYLVKGVCEKGRVGQ 276
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 95/223 (42%), Gaps = 6/223 (2%)
Query: 19 MRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGP 78
++ N G+ + AL + M + G+ ++S I L+ + + + F D+
Sbjct: 62 IKKLRNRGLYYPALKLSEVMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSK 121
Query: 79 RPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMD 138
+ +T+ ++ +C++ E LL+ M + P + +YN L+ Y G+T
Sbjct: 122 --TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPA 179
Query: 139 WLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI-QDMGIAPNTTIYNTLMDGY 197
+ + P T++ M AL ++ +V + + +D +AP+ T Y+ + Y
Sbjct: 180 MIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIY 239
Query: 198 VKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
V A +A +E+ K D + L+ YGR G+
Sbjct: 240 VDAGLSQKAEKALQELEMKNTQRDFTAYQFLIT---LYGRLGK 279
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 89/208 (42%), Gaps = 1/208 (0%)
Query: 30 EALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMI 89
+A +L++M+++ + PS + L L + G+ V + +++ + P S T+NV +
Sbjct: 141 KAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWM 200
Query: 90 CGFCRQQGLVVGESLLHLMPKFG-CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGC 148
+ E ++ M + G PD TY+ + + Y G + A L +
Sbjct: 201 RALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNT 260
Query: 149 EPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANM 208
+ + ++ R G + E +++ ++ + Y ++ VK ++ A
Sbjct: 261 QRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAET 320
Query: 209 LYEEMRGKGVSPDCVTFNILVGGHYKYG 236
L++E + + D N+L+G + + G
Sbjct: 321 LFKEWQANCSTYDIRIVNVLIGAYAQEG 348
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 33/199 (16%)
Query: 74 LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKT 133
L++ +P +T+ MI GFC L+ L +LM G D D ++ K +
Sbjct: 207 LKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQF 266
Query: 134 SVAMDWLNMMM-KNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIA-------- 184
A +M+ K G + + ++ LC+ G + ARKVFD +++ G+
Sbjct: 267 DEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWAS 326
Query: 185 -----------------------PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
P+ +IY+ L+ G VK + +A ++ +M +G P
Sbjct: 327 LIYGLLVKRRVVEAYGLVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPI 386
Query: 222 CVTFNILVGGHY-KYGRNG 239
T+ +L+ GH + GR G
Sbjct: 387 MHTYLMLLQGHLGRRGRKG 405
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
L K + + P+ V++N +I G R ++ L MP D + ++NI+I+AY
Sbjct: 171 LAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMP----DKNIISWNIMISAYL 226
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
V++ M++ G + + +T +++A R + E R V + + +
Sbjct: 227 GANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVV 286
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGR 237
I L+D Y K +E+G A +++ + + + VT+N+++ H +GR
Sbjct: 287 IDTALIDMYGKCKEVGLARRIFDSLSIR----NKVTWNVMILAHCLHGR 331
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 9/234 (3%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
+ D NT++ GF+ +G + A V +M R +S ++LF + D +V +
Sbjct: 297 KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK---RDLVSWNSLLFGYSKKGCDQRTVRE 353
Query: 69 LFKDM-LRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAY 127
LF +M + + +P VT +I G L G + L+ + DAF + LI+ Y
Sbjct: 354 LFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMY 413
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNT 187
C G A M+ K E +A +++++ L GN +A ++F R+Q+ G+ PN
Sbjct: 414 CKCGIIERAF----MVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNN 469
Query: 188 TIYNTLMDGYVKAREIGQANMLYEEMRGK-GVSPDCVTFNILVGGHYKYGRNGE 240
++ + + + ++ M+ K G P+ + LV + GR E
Sbjct: 470 VTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEE 523
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 38/198 (19%)
Query: 53 LFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFG 112
L + + +G++G K+F M P P +FNVMI G+ +Q + L M G
Sbjct: 172 LVKFYMELGNFGVAEKVFARM----PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG 227
Query: 113 CDPDAFTYNILINAYCIKGKTSVAM-----DWL---------NMMMKNGCEPSMATFSTI 158
+PD +T +L C + + + W+ N+++ N
Sbjct: 228 IEPDEYT--VLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNAL--------LD 277
Query: 159 MHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGV 218
M+ C+E + A++ FD ++ + +NT++ G+V+ ++ A ++++M +
Sbjct: 278 MYFKCKESGL--AKRAFDAMKKKDMRS----WNTMVVGFVRLGDMEAAQAVFDQMPKR-- 329
Query: 219 SPDCVTFNILVGGHYKYG 236
D V++N L+ G+ K G
Sbjct: 330 --DLVSWNSLLFGYSKKG 345
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%)
Query: 105 LHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCR 164
L+ M + G DP Y LI+ Y + G+ A + M G P++ T+++++ LC
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 165 EGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKG 217
G EA + ++ G PN +Y+TL+ KA ++ +A + +EM KG
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%)
Query: 132 KTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYN 191
K A+ LN M + G +PS+ ++T++ G + +A+++F + G PN YN
Sbjct: 704 KPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYN 763
Query: 192 TLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+++ G A E +A L +EM +G +P+ V ++ LVG K G+ E
Sbjct: 764 SMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSE 812
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%)
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
M G PS + + +I G+ L + + M G P+ FTYN +I C+ G+
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 774
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMG 182
A L M GC P+ +ST++ L + G + EARKV + G
Sbjct: 775 FREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 41 VGVRPSLS-AITILFRLLLR---VGDYGSVWKLFKDMLRKGPRP-SSVTFNVMICGFCRQ 95
+ +PS+S I + RL+LR GD M R G RP SVTF+ ++ R
Sbjct: 16 IKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRA 75
Query: 96 QGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
+ +G+ + + +F +PD+ YN LI+ Y G ++ A D M + G + + ++
Sbjct: 76 RDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG-KRDVVSW 134
Query: 156 STIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
S +M G ++A KVF ++G+ PN Y ++
Sbjct: 135 SAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 61 GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTY 120
G+ KLF DM+ P V++ VMI GF + + L MP + ++
Sbjct: 181 GNKEEACKLF-DMM---PENDVVSWTVMITGFAKVKDLENARKYFDRMP----EKSVVSW 232
Query: 121 NILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQD 180
N +++ Y G T A+ N M++ G P+ T+ ++ A + R + I +
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 181 MGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ N + L+D + K R+I A ++ E+ G + VT+N ++ G+ + G
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIG 345
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 112/292 (38%), Gaps = 82/292 (28%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRP------------SLSAITILFRLLLRV--- 60
N ++ G+ G +AL + + M +GVRP S A L R L+++
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 61 --------------------GDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVV 100
D S ++F ++ G + + VT+N MI G+ R +
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSS 349
Query: 101 GESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNG-CEPSMATFSTIM 159
L MPK + ++N LI Y G+ ++A+++ M+ G +P T +++
Sbjct: 350 ARQLFDTMPK----RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVL 405
Query: 160 HA-----------------------------------LCREGNVIEARKVFDRIQDMGIA 184
A R GN+ EA++VFD +++ +
Sbjct: 406 SACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVV 465
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
YNTL + + + L +M+ +G+ PD VT+ ++ + G
Sbjct: 466 S----YNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAG 513
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 84 TFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMM 143
TF ++ ++ L G+SL L K + N +N Y G+ S A
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYA----RAA 65
Query: 144 MKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREI 203
+ EP++ +++ I+ A ++ + AR++FD I P+T YNTL+ GY ARE
Sbjct: 66 FYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ----PDTVSYNTLISGYADARET 121
Query: 204 GQANMLYEEMRGKGVSPDCVTFNILVGG 231
A +L++ MR G D T + L+
Sbjct: 122 FAAMVLFKRMRKLGFEVDGFTLSGLIAA 149
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 68 KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVV-GESLLHLMPKFGCDPDAFTYNILINA 126
K+F+++L P V +N MI G+ + L M + G PD ++ + + +
Sbjct: 299 KVFQEILS----PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSF-VCVTS 353
Query: 127 YCIKGKTSVAMDWLNMMMKNGCEPS--MATFSTIMHALCREGNVIEARKVFDRIQDMGIA 184
C + ++ + PS ++ + ++ + GN+ +AR VFDR+ ++
Sbjct: 354 ACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL--- 410
Query: 185 PNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTF 225
N +N ++ GY + +A +LY+ M G++P+ +TF
Sbjct: 411 -NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITF 450
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 46/249 (18%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGD------------- 62
N+++ G+ G+ EAL + + MR VR S S+ + +L + +
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323
Query: 63 YGSVW----------------------KLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVV 100
YG ++ +LFK++ G + V++ MI GF + G
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEE 380
Query: 101 GESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH 160
L M + G P+ FTY++++ A + + V ++K E S + ++
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQ----VVKTNYERSSTVGTALLD 436
Query: 161 ALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSP 220
A + G V EA KVF I D I ++ ++ GY + E A ++ E+ G+ P
Sbjct: 437 AYVKLGKVEEAAKVFSGIDDKDIVA----WSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492
Query: 221 DCVTFNILV 229
+ TF+ ++
Sbjct: 493 NEFTFSSIL 501
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 67/257 (26%)
Query: 32 LDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICG 91
LD L +++G ++ + T + L+ LF +M RKG RP+ T++V++
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 92 FC---------------RQQGLVVGESLLHLMPKFGC------------DPDAFTYNILI 124
++ VG +LL K G D D ++ ++
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 125 NAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMH------------------------ 160
Y G+T A+ + K G +P+ TFS+I++
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 161 --ALC----------REGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANM 208
+LC ++GN+ A +VF R ++ + +N+++ GY + + +A
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS----WNSMISGYAQHGQAMKALD 582
Query: 209 LYEEMRGKGVSPDCVTF 225
+++EM+ + V D VTF
Sbjct: 583 VFKEMKKRKVKMDGVTF 599
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 37/239 (15%)
Query: 8 YESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVW 67
YE +V L+ ++ +G + EA V + D + A + + + G+ +
Sbjct: 424 YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD----KDIVAWSAMLAGYAQTGETEAAI 479
Query: 68 KLFKDMLRKGPRPSSVTFNVM--IC--------------GFCRQQ----GLVVGESLLHL 107
K+F ++ + G +P+ TF+ + +C GF + L V +LL +
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 539
Query: 108 MPKFGC------------DPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATF 155
K G + D ++N +I+ Y G+ A+D M K + TF
Sbjct: 540 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Query: 156 STIMHALCREGNVIEARKVFD-RIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEM 213
+ A G V E K FD ++D IAP + ++D Y +A ++ +A + E M
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 40/250 (16%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
L+ G++ +G + +A ++ ++D V A T + + G YG LF+ M+
Sbjct: 350 FTALLDGYIKLGDMNQAKNIFVSLKDRDV----VAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 75 RKGPRPSSVTFNVM---------------ICGFCRQQGLV----VGESLLHLMPKFG--- 112
G RP+S T M I G + G + V +L+ + K G
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 113 ----------CDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHAL 162
C+ D ++ +I A G A++ M+ G P T+ + A
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 163 CREGNVIEARKVFDRIQDMG-IAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPD 221
G V + R+ FD ++D+ I P + Y ++D + +A + +A E+M + PD
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPD 582
Query: 222 CVTFNILVGG 231
VT+ L+
Sbjct: 583 VVTWGSLLSA 592
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 103/234 (44%), Gaps = 21/234 (8%)
Query: 11 DFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWKLF 70
+ SV N+L+ + G A V RM V +S+ + L ++VG F
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRM----VVRDISSWNAMIALHMQVGQMDLAMAQF 235
Query: 71 KDMLRKGPRPSSVTFNVMICGFCRQQG--LVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ M + VT+N MI GF Q+G L + ++ PD FT +++A
Sbjct: 236 EQMAER----DIVTWNSMISGF-NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR--IQDMGIAPN 186
K + + ++ G + S + ++ R G V AR++ ++ +D+ I
Sbjct: 291 NLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEG- 349
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGE 240
+ L+DGY+K ++ QA ++ ++ + D V + ++ G+ ++G GE
Sbjct: 350 ---FTALLDGYIKLGDMNQAKNIFVSLKDR----DVVAWTAMIVGYEQHGSYGE 396
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRL-------------LLRVG 61
N L+ + ++ A+ VL RM+++ +RP + +LF L L +V
Sbjct: 434 FNNLLAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVD 493
Query: 62 DYGSVWKLFKDMLRKGPRPSSVT-------------FNVMICGFCRQQGL---------- 98
+ + DM+R G + S ++ N MI + + L
Sbjct: 494 CCKRINAIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGT 553
Query: 99 ----VVGESLLHL------------MPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNM 142
+V SLL M GC D TYNI+I+ + A ++M
Sbjct: 554 PTYNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSM 613
Query: 143 MMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKARE 202
M+++G P TF+ +M L + N EA + D+ I + YNT++ +
Sbjct: 614 MIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGM 673
Query: 203 IGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
I + E+M + V+PD T + + + + G
Sbjct: 674 IDVIEYIVEQMHREKVNPDPTTCHYVFSCYVEKG 707
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 15 LNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRL-------------LLRVG 61
N L+ + ++ A+ VL RM+++ +RP + +LF L L +V
Sbjct: 406 FNNLLAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVD 465
Query: 62 DYGSVWKLFKDMLRKGPRPSSVT-------------FNVMICGFCRQQGL---------- 98
+ + DM+R G + S ++ N MI + + L
Sbjct: 466 CCKRINAIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGT 525
Query: 99 ----VVGESLLHL------------MPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNM 142
+V SLL M GC D TYNI+I+ + A ++M
Sbjct: 526 PTYNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSM 585
Query: 143 MMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKARE 202
M+++G P TF+ +M L + N EA + D+ I + YNT++ +
Sbjct: 586 MIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGM 645
Query: 203 IGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
I + E+M + V+PD T + + + + G
Sbjct: 646 IDVIEYIVEQMHREKVNPDPTTCHYVFSCYVEKG 679
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 104/228 (45%), Gaps = 20/228 (8%)
Query: 16 NTLMRGFLNVGMIFEALDVLHRMRDVGV-RPSLSAITILFRLLLRVGDYGSVWKLFKDML 74
N L++G+ N + FE + +L RM G+ RP ++ ++ G + +L
Sbjct: 78 NHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVL 137
Query: 75 RKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTS 134
R G V + + + + L + MP + +A ++ L+ AY G+
Sbjct: 138 RIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMP----ERNAVSWTALVVAYVKSGELE 193
Query: 135 VAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLM 194
A ++M E ++ +++ ++ L + G+++ A+K+FD + I Y +++
Sbjct: 194 EAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS----YTSMI 245
Query: 195 DGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYGRNGEWN 242
DGY K ++ A L+EE RG D ++ L+ G Y +NG+ N
Sbjct: 246 DGYAKGGDMVSARDLFEEARG----VDVRAWSALILG---YAQNGQPN 286
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 73 MLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGK 132
+LR+G + ++ + R L VG+ + M D D ++N LI++Y + G
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH----DRDVVSWNSLISSYGVHGY 366
Query: 133 TSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRI-QDMGIAPNTTIYN 191
A+ M+ NG P+ TF +++ A EG V E +++F+ + +D GI P Y
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYA 426
Query: 192 TLMDGYVKAREIGQANMLYEEMR 214
++D +A + +A + ++MR
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMR 449
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 10/225 (4%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E N ++ G+ G+ +A+ + M+ P+ IT + ++G S+ K
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL-SLGK 440
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVV-GESLLHLMPKFGCDPDAFTYNILINAY 127
D++R SS+ + + G + G + L LM K + T+N +I+ Y
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK----KNEVTWNTMISGY 496
Query: 128 CIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDR-IQDMGIAPN 186
+ G+ A++ M+ +G P+ TF +++A G V E ++F+ I G P+
Sbjct: 497 GLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPS 556
Query: 187 TTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGG 231
Y ++D +A + +A E M + P + L+G
Sbjct: 557 VKHYACMVDILGRAGHLQRALQFIEAM---SIEPGSSVWETLLGA 598
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 50 ITILFRLLLRVGDYGSVWKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLL-HLM 108
I++L +L R+ D G+++ +D+ RP FNV++ GF + S+ HL
Sbjct: 52 ISLLTKLTQRLSDLGAIY-YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLR 110
Query: 109 PKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNV 168
P++ TY I+A + +GC+ + S I+ + V
Sbjct: 111 KSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRV 170
Query: 169 IEARKVFDRIQDMGIAPNTTIYNTLMDGYVK 199
+ARKVFDR+ + +T ++NT++ GY K
Sbjct: 171 EDARKVFDRMPE----KDTILWNTMISGYRK 197
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 98/228 (42%), Gaps = 8/228 (3%)
Query: 9 ESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSVWK 68
E D + NT++ F G +AL++ RM G P+ ++T+ R+ +
Sbjct: 170 ERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKE 229
Query: 69 LFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYC 128
+ + ++KG + ++ + + L V + MP+ +N +I Y
Sbjct: 230 IHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR----KSLVAWNSMIKGYV 285
Query: 129 IKGKTSVAMDWLNMMMKNGCEPSMATFSTIMHALCREGNVIEARKVFDRIQDMGIAPNTT 188
KG + ++ LN M+ G PS T ++I+ A R N++ + + + + +
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 189 IYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFNILVGGHYKYG 236
+ +L+D Y K G+AN L E + K ++N+++ + G
Sbjct: 346 VNCSLIDLYFKC---GEAN-LAETVFSKTQKDVAESWNVMISSYISVG 389