Miyakogusa Predicted Gene
- Lj0g3v0232589.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0232589.1 tr|Q3E906|Q3E906_ARATH Cell division cycle 20,
cofactor of APC complex OS=Arabidopsis thaliana
GN=At,43.8,6e-19,WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; WD40,WD40 repeat;
SUBFAMI,gene.g18219.t1.1
(272 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33270.1 | Symbols: CDC20.1 | Transducin family protein / WD-... 110 1e-24
AT4G33260.1 | Symbols: CDC20.2 | Transducin family protein / WD-... 110 1e-24
AT4G33260.2 | Symbols: CDC20.2 | Transducin family protein / WD-... 109 2e-24
AT5G27570.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 106 2e-23
AT5G27080.1 | Symbols: | Transducin family protein / WD-40 repe... 101 6e-22
AT5G26900.1 | Symbols: | Transducin family protein / WD-40 repe... 100 1e-21
AT5G27945.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 99 2e-21
AT4G22910.1 | Symbols: FZR2, CCS52A1 | FIZZY-related 2 | chr4:12... 96 3e-20
AT5G13840.2 | Symbols: FZR3 | FIZZY-related 3 | chr5:4468677-447... 94 8e-20
AT5G13840.1 | Symbols: FZR3 | FIZZY-related 3 | chr5:4468677-447... 94 8e-20
AT4G11920.1 | Symbols: CCS52A2, FZR1 | cell cycle switch protein... 91 8e-19
AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like superf... 51 1e-06
>AT4G33270.1 | Symbols: CDC20.1 | Transducin family protein / WD-40
repeat family protein | chr4:16044545-16046590 REVERSE
LENGTH=457
Length = 457
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 121/235 (51%), Gaps = 26/235 (11%)
Query: 25 ESYRQKLDETLNLGSDGKPFRMLVFRGCPKSTRKSIREAEAAAL--QNRSNQPHSRAMPK 82
E+YR++L ET+NL R+L FR P++ + + +A+L Q +S +P R +P+
Sbjct: 72 EAYRKQLAETMNLNHT----RILAFRNKPQAPVELLPSNHSASLHQQPKSVKPR-RYIPQ 126
Query: 83 KETKILDVPNIRNDYYANIMDWGKNNILAVALGSEIFLWNSLNSNVLQLFEGTDDDCP-T 141
+ LD P+I +D+Y N++DWG N+LA+AL ++LW++ + +L ++ P T
Sbjct: 127 TSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVT 186
Query: 142 SVAWSQDAKLLAAGFMNSELQLWDAETSKP-----------VCGLEWNRHHKEILSGHGF 190
S+ W+ D + +A G NSE+QLWD+ +++ V L WN H IL+ G
Sbjct: 187 SINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH---ILTTGGM 243
Query: 191 STSSSHNQLCLWRYPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWD 245
+N + + R P + G H V L S G + S G D + WD
Sbjct: 244 DGLIINNDVRI-RSPIVETYRG---HTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 16/123 (13%)
Query: 142 SVAWSQ-DAKLLAAGFMNSE--LQLWD---------AETSKPVCGLEWNRHHKEILSGHG 189
++AW A LLA G + ++ W+ +T VC L W+++ +E+LS HG
Sbjct: 319 ALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHG 378
Query: 190 FSTSSSHNQLCLWRYPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWDIFGP 249
F+ NQL LW+YPSM K+ L H SRVL+++QSPDG TV SA DE LRFW++FG
Sbjct: 379 FT----QNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGV 434
Query: 250 PAT 252
P T
Sbjct: 435 PET 437
>AT4G33260.1 | Symbols: CDC20.2 | Transducin family protein / WD-40
repeat family protein | chr4:16041233-16043180 REVERSE
LENGTH=447
Length = 447
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 121/235 (51%), Gaps = 26/235 (11%)
Query: 25 ESYRQKLDETLNLGSDGKPFRMLVFRGCPKSTRKSIREAEAAAL--QNRSNQPHSRAMPK 82
E+YR++L ET+NL R+L FR P++ + + +A+L Q +S +P R +P+
Sbjct: 62 EAYRKQLAETMNLNHT----RILAFRNKPQAPVELLPSNHSASLHQQPKSVKPR-RYIPQ 116
Query: 83 KETKILDVPNIRNDYYANIMDWGKNNILAVALGSEIFLWNSLNSNVLQLFEGTDDDCP-T 141
+ LD P+I +D+Y N++DWG N+LA+AL ++LW++ + +L ++ P T
Sbjct: 117 TSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVT 176
Query: 142 SVAWSQDAKLLAAGFMNSELQLWDAETSKP-----------VCGLEWNRHHKEILSGHGF 190
S+ W+ D + +A G NSE+QLWD+ +++ V L WN H IL+ G
Sbjct: 177 SINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH---ILTTGGM 233
Query: 191 STSSSHNQLCLWRYPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWD 245
+N + + R P + G H V L S G + S G D + WD
Sbjct: 234 DGLIINNDVRI-RSPIVETYRG---HTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 16/123 (13%)
Query: 142 SVAWSQ-DAKLLAAGFMNSE--LQLWD---------AETSKPVCGLEWNRHHKEILSGHG 189
++AW A LLA G + ++ W+ +T VC L W+++ +E+LS HG
Sbjct: 309 ALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHG 368
Query: 190 FSTSSSHNQLCLWRYPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWDIFGP 249
F+ NQL LW+YPSM K+ L H SRVL+++QSPDG TV SA DE LRFW++FG
Sbjct: 369 FT----QNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGV 424
Query: 250 PAT 252
P T
Sbjct: 425 PET 427
>AT4G33260.2 | Symbols: CDC20.2 | Transducin family protein / WD-40
repeat family protein | chr4:16041195-16043180 REVERSE
LENGTH=441
Length = 441
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 121/235 (51%), Gaps = 26/235 (11%)
Query: 25 ESYRQKLDETLNLGSDGKPFRMLVFRGCPKSTRKSIREAEAAAL--QNRSNQPHSRAMPK 82
E+YR++L ET+NL R+L FR P++ + + +A+L Q +S +P R +P+
Sbjct: 62 EAYRKQLAETMNLNHT----RILAFRNKPQAPVELLPSNHSASLHQQPKSVKPR-RYIPQ 116
Query: 83 KETKILDVPNIRNDYYANIMDWGKNNILAVALGSEIFLWNSLNSNVLQLFEGTDDDCP-T 141
+ LD P+I +D+Y N++DWG N+LA+AL ++LW++ + +L ++ P T
Sbjct: 117 TSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVT 176
Query: 142 SVAWSQDAKLLAAGFMNSELQLWDAETSKP-----------VCGLEWNRHHKEILSGHGF 190
S+ W+ D + +A G NSE+QLWD+ +++ V L WN H IL+ G
Sbjct: 177 SINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH---ILTTGGM 233
Query: 191 STSSSHNQLCLWRYPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWD 245
+N + + R P + G H V L S G + S G D + WD
Sbjct: 234 DGLIINNDVRI-RSPIVETYRG---HTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 67/118 (56%), Gaps = 16/118 (13%)
Query: 142 SVAWSQ-DAKLLAAGFMNSE--LQLWD---------AETSKPVCGLEWNRHHKEILSGHG 189
++AW A LLA G + ++ W+ +T VC L W+++ +E+LS HG
Sbjct: 309 ALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHG 368
Query: 190 FSTSSSHNQLCLWRYPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWDIF 247
F+ NQL LW+YPSM K+ L H SRVL+++QSPDG TV SA DE L IF
Sbjct: 369 FT----QNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLSCRAIF 422
>AT5G27570.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:9734896-9736131 REVERSE LENGTH=411
Length = 411
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 114/241 (47%), Gaps = 41/241 (17%)
Query: 25 ESYRQKLDETLNLGSDGKPFRMLVFRGCPKSTRKSIREAEAAALQNRSNQPHS------- 77
++Y +L E +N R+L FR PK+ S N S+ PH
Sbjct: 27 KAYMTQLAEAMNQNRT----RILAFRNKPKALLSS----------NHSDPPHQQPISVKP 72
Query: 78 -RAMPKKETKILDVPNIRNDYYANIMDWGKNNILAVALGSEIFLWNSLNSNVLQLFEGTD 136
R +P+ ++LD P I +D+Y N++DWG +N+LA+ALG ++LW++ + + +L +
Sbjct: 73 RRYIPQNSERVLDAPGIADDFYLNLLDWGSSNVLAIALGDTVYLWDASSGSTYKLVTIDE 132
Query: 137 DDCP-TSVAWSQDAKLLAAGFMNSELQLWDAETSKP-----------VCGLEWNRHHKEI 184
++ P TS+ W+QD LA G NSE+QLWD +++ V L WN H I
Sbjct: 133 EEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWNNH---I 189
Query: 185 LSGHGFSTSSSHNQLCLWRYPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFW 244
L+ G +N + + T +G H V L S G + S G D + W
Sbjct: 190 LTTGGMDGKIVNNDVRIRSSIVETYLG----HTEEVCGLKWSESGKKLASGGNDNVVHIW 245
Query: 245 D 245
D
Sbjct: 246 D 246
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 16/121 (13%)
Query: 142 SVAWSQ-DAKLLA--AGFMNSELQLWD---------AETSKPVCGLEWNRHHKEILSGHG 189
++AW A LLA G + +++ W+ ET VC L W++ +E+LS HG
Sbjct: 272 ALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSSHG 331
Query: 190 FSTSSSHNQLCLWRYPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWDIFGP 249
F+ NQL LW+YPSM K+ L H SRVL ++QSPDG TV SA DE LR W++FG
Sbjct: 332 FT----QNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
Query: 250 P 250
P
Sbjct: 388 P 388
>AT5G27080.1 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr5:9529603-9531081 REVERSE LENGTH=466
Length = 466
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 17/144 (11%)
Query: 142 SVAWSQ-DAKLLA--AGFMNSELQLWD---------AETSKPVCGLEWNRHHKEILSGHG 189
++AW A LLA G + +++ W+ ET VC L W++ +E+LS HG
Sbjct: 303 ALAWCPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHG 362
Query: 190 FSTSSSHNQLCLWRYPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWDIFGP 249
F+ NQL LW+YPSM+K+ L H SRVL ++QSP+G TV SA DE LR W++FG
Sbjct: 363 FT----QNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
Query: 250 PATDTSKISYLDNLLSFK-ISQLR 272
P T K + + L F ++ LR
Sbjct: 419 PPKTTKKAASKNYLELFSHVNSLR 442
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 37/221 (16%)
Query: 45 RMLVFRGCPKSTRKSIREAEAAALQNRSNQPHS--------RAMPKKETKILDVPNIRND 96
R+L FR PK+ S N S+ PH R +P+ ++LD P + +D
Sbjct: 74 RILAFRNKPKALLSS----------NHSDSPHQNPKSVKPRRYIPQNSERVLDAPGLMDD 123
Query: 97 YYANIMDWGKNNILAVALGSEIFLWNSLNSNVLQLFEGTDDDCP-TSVAWSQDAKLLAAG 155
+Y N++DWG N+LA+ALG ++LW++ + + +L +D P TS+ W+QD LA G
Sbjct: 124 FYLNLLDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVG 183
Query: 156 FMNSELQLWDAETSKP-----------VCGLEWNRHHKEILSGHGFSTSSSHNQLCLWRY 204
NSE+QLWD +++ V L WN H IL+ G +N + +
Sbjct: 184 LDNSEVQLWDFVSNRQVRTLIGGHESRVGSLAWNNH---ILTTGGMDGKIVNNDVRI--- 237
Query: 205 PSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWD 245
+ VG H V L S G + S G + WD
Sbjct: 238 -RSSIVGTYLGHTEEVCGLKWSESGKKLASGGNYNVVHIWD 277
>AT5G26900.1 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr5:9463752-9465086 FORWARD LENGTH=444
Length = 444
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 37/221 (16%)
Query: 45 RMLVFRGCPKSTRKSIREAEAAALQNRSNQPHS--------RAMPKKETKILDVPNIRND 96
R+L FR PKS + N S+ PH R +P+ ++LD P +R+D
Sbjct: 77 RILAFRNKPKSLLST----------NHSDSPHQNPKPVKPRRYIPQNSERVLDAPGLRDD 126
Query: 97 YYANIMDWGKNNILAVALGSEIFLWNSLNSNVLQLFEGTDDDCP-TSVAWSQDAKLLAAG 155
+ N++DWG N+LA+ALG ++LW++ + + +L +D P TS+ W+QD LA G
Sbjct: 127 FSLNLLDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVG 186
Query: 156 FMNSELQLWDAETSKP-----------VCGLEWNRHHKEILSGHGFSTSSSHNQLCLWRY 204
NSE+QLWD +++ V L W+ H IL+ G +N + +
Sbjct: 187 LDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWDNH---ILTTGGMDGKIVNNDVRIRSS 243
Query: 205 PSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWD 245
T +G H V L S G S G D + WD
Sbjct: 244 IVETYLG----HTEEVCGLKWSESGNKQASGGNDNVVHIWD 280
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 16/121 (13%)
Query: 142 SVAWSQ-DAKLLA--AGFMNSELQLWD---------AETSKPVCGLEWNRHHKEILSGHG 189
++AW A LLA G + +++ W+ ET VC L W++ +E+LS HG
Sbjct: 305 ALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHG 364
Query: 190 FSTSSSHNQLCLWRYPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWDIFGP 249
F+ NQL LW+YPSM+K+ L H SRVL ++QSP+G TV SA DE LR W++FG
Sbjct: 365 FT----QNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
Query: 250 P 250
P
Sbjct: 421 P 421
>AT5G27945.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:9976007-9977601 FORWARD LENGTH=428
Length = 428
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 70/121 (57%), Gaps = 16/121 (13%)
Query: 142 SVAWSQ-DAKLLA--AGFMNSELQLWD---------AETSKPVCGLEWNRHHKEILSGHG 189
++AW A LLA G + ++ W+ ET VC L W++ +E+LS HG
Sbjct: 289 ALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHG 348
Query: 190 FSTSSSHNQLCLWRYPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWDIFGP 249
F+ NQL LW+YPSM K+ L H SRVL ++QSPDG TV SA DE LR W++FG
Sbjct: 349 FT----QNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Query: 250 P 250
P
Sbjct: 405 P 405
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 19/149 (12%)
Query: 109 ILAVALGSEIFLWNSLNSNVLQLFEGTDDDCP-TSVAWSQDAKLLAAGFMNSELQLWDAE 167
I+ LG ++LW++ + +L D++ P TS+ W+QD LA G NSE+Q+WD
Sbjct: 123 IVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCV 182
Query: 168 TSKP-----------VCGLEWNRHHKEILSGHGFSTSSSHNQLCLWRYPSMTKVGGLGPH 216
+++ V L WN H IL+ G +N + + T VG H
Sbjct: 183 SNRHVRTLRGGHESRVGSLAWNNH---ILTTGGMDGKIVNNDVRIRSSIIGTYVG----H 235
Query: 217 ASRVLHLSQSPDGLTVVSAGADERLRFWD 245
V L S G + S G D + WD
Sbjct: 236 TEEVCGLKWSESGKKLASGGNDNVVHIWD 264
>AT4G22910.1 | Symbols: FZR2, CCS52A1 | FIZZY-related 2 |
chr4:12012743-12015663 FORWARD LENGTH=483
Length = 483
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Query: 78 RAMPKKETKILDVPNIRNDYYANIMDWGKNNILAVALGSEIFLWNSLNSNVLQLFEGTDD 137
R +P+ K+LD P +++D+Y N++DW N+LAV LG+ ++LWN+ +S V +L + +
Sbjct: 158 RKVPRSPYKVLDAPALQDDFYLNLVDWSAQNVLAVGLGNCVYLWNACSSKVTKLCDLGAE 217
Query: 138 DCPTSVAWSQDAKLLAAGFMNSELQLWDAETSKPVCGLEWNRHHKEILS-GHGFSTSSSH 196
D SV W+ LA G ++Q+WDA K +E +R L+ G +S S
Sbjct: 218 DSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWGSSVLSSGSR 277
Query: 197 NQLCLWRYPSMTK--VGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWD 245
++ L R + V L H S V L S D + S G D RL W+
Sbjct: 278 DKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWN 328
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 21/169 (12%)
Query: 102 MDWGKNNILAVALGSE--IFLWNSLNSN-VLQLFEGTDDDCPTSVAWSQDAK-LLAAGFM 157
+ W +N + G++ +F+WN ++ VL+ E T ++AWS LLA+G
Sbjct: 306 LKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTA--AVKAIAWSPHVHGLLASGGG 363
Query: 158 NSE--LQLWDA---------ETSKPVCGLEWNRHHKEILSGHGFSTSSSHNQLCLWRYPS 206
++ ++ W+ +T VC L W+++ E++S HG+S NQ+ +W+YP+
Sbjct: 364 TADRCIRFWNTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYS----QNQIIVWKYPT 419
Query: 207 MTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWDIFGPPATDTS 255
M+K+ L H RVL+L+ SPDG T+V+ DE LRFW++F P + +
Sbjct: 420 MSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQNT 468
>AT5G13840.2 | Symbols: FZR3 | FIZZY-related 3 |
chr5:4468677-4470706 REVERSE LENGTH=481
Length = 481
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 19/144 (13%)
Query: 117 EIFLWNSLNSN-VLQLFEGTDDDCPTSVAWS-QDAKLLAAGFMNSE--LQLWDA------ 166
++ +WN+ + +L+L E T ++ WS + LLA+G ++ ++ W+
Sbjct: 321 QLLVWNNHSQQPILKLTEHTA--AVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQL 378
Query: 167 ---ETSKPVCGLEWNRHHKEILSGHGFSTSSSHNQLCLWRYPSMTKVGGLGPHASRVLHL 223
+T VC L W+++ EI+S HG+S NQ+ LW+YPSM+KV L H+ RVL+L
Sbjct: 379 NSIDTGSQVCNLAWSKNVNEIVSTHGYS----QNQIMLWKYPSMSKVATLTGHSMRVLYL 434
Query: 224 SQSPDGLTVVSAGADERLRFWDIF 247
+ SPDG T+V+ DE LRFW++F
Sbjct: 435 ATSPDGQTIVTGAGDETLRFWNVF 458
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 60/214 (28%)
Query: 86 KILDVPNIRNDYYANIMDWGKNNILAVALGSEIFLWNSLNSNVLQLFEGTDDDCPTSVAW 145
K+LD P++++D+Y N++DW N+LAV LG+ ++LW + NS V +L + +D SV W
Sbjct: 164 KVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCSVQW 223
Query: 146 SQDAKLLAAGFMNSELQLWDAETSK----------------------------------- 170
+++ ++ G + ++Q+WD K
Sbjct: 224 TREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHD 283
Query: 171 ----------------PVCGLEWNRHHKEILSGHGFSTSSSHNQLCLWRYPSMTKVGGLG 214
VCGL+W+ +E+ SG + NQL +W S + L
Sbjct: 284 IRVQSDFVSKLVGHKSEVCGLKWSHDDRELASG------GNDNQLLVWNNHSQQPILKLT 337
Query: 215 PHASRVLHLSQSPDGLTVVSAG---ADERLRFWD 245
H + V ++ SP +++++G AD +RFW+
Sbjct: 338 EHTAAVKAITWSPHQSSLLASGGGTADRCIRFWN 371
>AT5G13840.1 | Symbols: FZR3 | FIZZY-related 3 |
chr5:4468677-4470706 REVERSE LENGTH=481
Length = 481
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 19/144 (13%)
Query: 117 EIFLWNSLNSN-VLQLFEGTDDDCPTSVAWS-QDAKLLAAGFMNSE--LQLWDA------ 166
++ +WN+ + +L+L E T ++ WS + LLA+G ++ ++ W+
Sbjct: 321 QLLVWNNHSQQPILKLTEHTA--AVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQL 378
Query: 167 ---ETSKPVCGLEWNRHHKEILSGHGFSTSSSHNQLCLWRYPSMTKVGGLGPHASRVLHL 223
+T VC L W+++ EI+S HG+S NQ+ LW+YPSM+KV L H+ RVL+L
Sbjct: 379 NSIDTGSQVCNLAWSKNVNEIVSTHGYS----QNQIMLWKYPSMSKVATLTGHSMRVLYL 434
Query: 224 SQSPDGLTVVSAGADERLRFWDIF 247
+ SPDG T+V+ DE LRFW++F
Sbjct: 435 ATSPDGQTIVTGAGDETLRFWNVF 458
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 60/214 (28%)
Query: 86 KILDVPNIRNDYYANIMDWGKNNILAVALGSEIFLWNSLNSNVLQLFEGTDDDCPTSVAW 145
K+LD P++++D+Y N++DW N+LAV LG+ ++LW + NS V +L + +D SV W
Sbjct: 164 KVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCSVQW 223
Query: 146 SQDAKLLAAGFMNSELQLWDAETSK----------------------------------- 170
+++ ++ G + ++Q+WD K
Sbjct: 224 TREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHD 283
Query: 171 ----------------PVCGLEWNRHHKEILSGHGFSTSSSHNQLCLWRYPSMTKVGGLG 214
VCGL+W+ +E+ SG + NQL +W S + L
Sbjct: 284 IRVQSDFVSKLVGHKSEVCGLKWSHDDRELASG------GNDNQLLVWNNHSQQPILKLT 337
Query: 215 PHASRVLHLSQSPDGLTVVSAG---ADERLRFWD 245
H + V ++ SP +++++G AD +RFW+
Sbjct: 338 EHTAAVKAITWSPHQSSLLASGGGTADRCIRFWN 371
>AT4G11920.1 | Symbols: CCS52A2, FZR1 | cell cycle switch protein 52
A2 | chr4:7160618-7163257 REVERSE LENGTH=475
Length = 475
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 102/186 (54%), Gaps = 23/186 (12%)
Query: 102 MDWGKNNILAVALGSE--IFLWNSLNSN-VLQLFEGTDDDCPTSVAWS-QDAKLLAAGFM 157
+ W +N + G++ +F+WN ++ VL+ E ++AWS LLA+G
Sbjct: 298 LKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAA--AVKAIAWSPHHFGLLASGGG 355
Query: 158 NSE--LQLWD---------AETSKPVCGLEWNRHHKEILSGHGFSTSSSHNQLCLWRYPS 206
++ ++ W+ +T+ VC L W+++ E++S HG+S NQ+ +W+YP+
Sbjct: 356 TADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYS----QNQIIVWKYPT 411
Query: 207 MTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWDIFGPPATDTSKISYLDNLLSF 266
M+K+ L H+ RVL+L+ SPDG T+V+ DE LRFW++F P + + + LSF
Sbjct: 412 MSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQSRESEI--GALSF 469
Query: 267 KISQLR 272
+ +R
Sbjct: 470 GRTTIR 475
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 60/222 (27%)
Query: 78 RAMPKKETKILDVPNIRNDYYANIMDWGKNNILAVALGSEIFLWNSLNSNVLQLFEGTDD 137
R + + K+LD P +++D+Y N++DW N+LAV LG+ ++LWN+ +S V +L + D
Sbjct: 150 RKILRSPYKVLDAPALQDDFYLNLVDWSAQNVLAVGLGNCVYLWNACSSKVTKLCDLGVD 209
Query: 138 DCPTSVAWSQDAKLLAAGFMNSELQLWDAETSK--------------------------- 170
+ SV W+ LA G + +Q+WD K
Sbjct: 210 ETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSSSVLSSGSR 269
Query: 171 ------------------------PVCGLEWNRHHKEILSGHGFSTSSSHNQLCLWRYPS 206
+CGL+W+ ++E+ SG + N+L +W S
Sbjct: 270 DKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASG------GNDNKLFVWNQHS 323
Query: 207 MTKVGGLGPHASRVLHLSQSPDGLTVVSAG---ADERLRFWD 245
V HA+ V ++ SP ++++G AD +RFW+
Sbjct: 324 TQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWN 365
>AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like
superfamily protein | chr4:14597728-14599157 FORWARD
LENGTH=321
Length = 321
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 106 KNNILAVALGSE--IFLWNSLNSNVLQLFEGTDDDCPT------------SVAWSQDAKL 151
K ILAVA GS + LW++ + ++ D P SVAWS + K
Sbjct: 113 KGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKR 172
Query: 152 LAAGFMNSELQLWDAETSKPVCGLEWNRHHKEILSGHGFS--------TSSSHNQLCLWR 203
LA G M+ + ++D + SK + LE H + FS + S + +
Sbjct: 173 LACGSMDGTICVFDVDRSKLLHQLE---GHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD 229
Query: 204 YPSMTKVGGLGPHASRVLHLSQSPDGLTVVSAGADERLRFWDI 246
T +G + H S VL + SPDG + + +D +R WD+
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDL 272