Miyakogusa Predicted Gene

Lj0g3v0232289.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0232289.1 Non Chatacterized Hit- tr|A5AQL1|A5AQL1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.17,8e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.15212.1
         (307 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48770.1 | Symbols:  | DNA binding;ATP binding | chr3:1807926...   270   6e-73

>AT3G48770.1 | Symbols:  | DNA binding;ATP binding |
            chr3:18079261-18086817 REVERSE LENGTH=1899
          Length = 1899

 Score =  270 bits (691), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 138/305 (45%), Positives = 184/305 (60%), Gaps = 6/305 (1%)

Query: 1    MQCVRSLHAPSKLLNSL--KGTIFLKTNLGYKKPSECFWYDPVWGCIFEVFDDVPVIDHK 58
            + C+R L +P +L+N+L      F     GYK P+ECF  DP W C+  VFD  P+ID  
Sbjct: 1190 LDCMRQL-SPHRLINALWNSSQCFKTKKNGYKSPAECFIPDPEWTCLLSVFDCFPLIDDD 1248

Query: 59   FYGEKIFTYKHELKQIGVVVDFEDAIDKFAPLFKQKVSKNLFNPQHVKSFLSCCKKLMAT 118
            FYG +IF YK ELKQIGV +  E+A+  F   FKQK   +        S LSC KKLM +
Sbjct: 1249 FYGSRIFAYKGELKQIGVKLQLEEAVKMFVSTFKQKAISSGLTRCTASSLLSCYKKLMGS 1308

Query: 119  EYKFPSDFSLIIRQQKWLQTRLGDYRDPRQCILYGPEWKSISSITLLPFINDSDNCYGMG 178
             YK+P +     +Q +WL T+LGD+R P+ CIL+  EW+ +  I  LPFI+D  N YG  
Sbjct: 1309 LYKYPEELMKSFKQFQWLHTKLGDFRAPKDCILFDSEWEPLRLIANLPFIDDGPNWYGKS 1368

Query: 179  IHEYKEELKSFGVVTELKGGLQFVPKYLKFPSDPSTITPESVFSFLECIRLLMQEKKLVV 238
            IHE+++EL+S GV  EL+ G+  V   L  P DPS I P S  S   CI+ L +++   +
Sbjct: 1369 IHEFRKELESLGVTVELRKGMSHVISSLSLP-DPSRIAPSSALSLFRCIKFLREDRFQQL 1427

Query: 239  EDDLTKRLSRNWLKTHAGYLPPDKCLLFGSKWDLYLKPSDGPFIDENFYGPKIASYSKEL 298
              +L  ++S  WLKTHAGY  P++CLLF   W   L+P DGPFIDE +YG  I S+ +EL
Sbjct: 1428 PKELLDKVSVKWLKTHAGYRSPEECLLFDRTWK--LEPCDGPFIDEEYYGSDINSFREEL 1485

Query: 299  NEIGV 303
              IGV
Sbjct: 1486 IAIGV 1490



 Score =  131 bits (330), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 151/302 (50%), Gaps = 18/302 (5%)

Query: 11   SKLLNSLKGTIFLKTNLG----YKKPSECFWYDPVWGCIFE---VFDDVPVIDHKFYGEK 63
            S  LNS++G  +L+T +     Y+ PS+ F++   WG I +   +  D+P++D  +YG +
Sbjct: 974  SNFLNSVRGGSWLRTTMNGVSDYRPPSQSFYHTSSWGSILQNGSILVDIPLVDRSYYGNE 1033

Query: 64   IFTYKHELKQIGVVVDFEDAIDKFAPLFKQKVSKNLFNPQHVKSFLSCCKKLMATEYKFP 123
            I  YK ELK  GV+ +F +               +  +  +V S L   + L       P
Sbjct: 1034 IEKYKEELKIAGVMFEFSEVCRFVGNHLMSLAETSTQSSANVFSILKFIRYLREKRLS-P 1092

Query: 124  SDFSLIIRQQKWLQTRLGDYRDPRQCILYGPEWKSISSITLLPFINDSDNCYG-MGIHEY 182
            +DF   ++   WL+T  G YR P   +L+  EWK+ S I+ +PFI+     YG + ++ Y
Sbjct: 1093 ADFITAVKNGPWLKTISG-YRSPDGAVLFSEEWKAASLISDIPFIDRG--FYGVVSLNGY 1149

Query: 183  KEELKSFGVVTELKGGLQFVPKYLKFPSDPSTITPESVFSFLECIRLLMQEKKLVVEDDL 242
            KEEL+  GVV +       +  +L   +  + +TP+++F  L+C+R L   + +    + 
Sbjct: 1150 KEELELLGVVVKFPDNYSLIVSHLN-TAKLTYLTPDAMFLVLDCMRQLSPHRLI----NA 1204

Query: 243  TKRLSRNWLKTHAGYLPPDKCLLFGSKWDLYLKPSDG-PFIDENFYGPKIASYSKELNEI 301
                S+ +     GY  P +C +   +W   L   D  P ID++FYG +I +Y  EL +I
Sbjct: 1205 LWNSSQCFKTKKNGYKSPAECFIPDPEWTCLLSVFDCFPLIDDDFYGSRIFAYKGELKQI 1264

Query: 302  GV 303
            GV
Sbjct: 1265 GV 1266



 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 133/302 (44%), Gaps = 14/302 (4%)

Query: 9    APSKLLNSLKGTIFLKTNLGYKKPSECFWYDPVWGCIFEVFDDVPVIDHKFYGE-KIFTY 67
            +P+  + ++K   +LKT  GY+ P     +   W     +  D+P ID  FYG   +  Y
Sbjct: 1091 SPADFITAVKNGPWLKTISGYRSPDGAVLFSEEWKAA-SLISDIPFIDRGFYGVVSLNGY 1149

Query: 68   KHELKQIGVVVDFEDAIDKFAPLFKQKVSKNLFNPQHVKSFLSCCKKLMATEYKFPSDFS 127
            K EL+ +GVVV F D                   P  +   L C ++L           +
Sbjct: 1150 KEELELLGVVVKFPDNYSLIVSHL-NTAKLTYLTPDAMFLVLDCMRQLSPHRL-----IN 1203

Query: 128  LIIRQQKWLQTRLGDYRDPRQCILYGPEWKSISSI-TLLPFINDSDNCYGMGIHEYKEEL 186
             +    +  +T+   Y+ P +C +  PEW  + S+    P I+D  + YG  I  YK EL
Sbjct: 1204 ALWNSSQCFKTKKNGYKSPAECFIPDPEWTCLLSVFDCFPLIDD--DFYGSRIFAYKGEL 1261

Query: 187  KSFGVVTELKGGLQFVPKYLKFPSDPSTITPESVFSFLECIRLLMQEKKLVVEDDLTKRL 246
            K  GV  +L+  ++      K  +  S +T  +  S L C + LM       E+ +    
Sbjct: 1262 KQIGVKLQLEEAVKMFVSTFKQKAISSGLTRCTASSLLSCYKKLMGSLYKYPEELMKSFK 1321

Query: 247  SRNWLKTHAG-YLPPDKCLLFGSKWDLYLKPSDGPFIDE--NFYGPKIASYSKELNEIGV 303
               WL T  G +  P  C+LF S+W+     ++ PFID+  N+YG  I  + KEL  +GV
Sbjct: 1322 QFQWLHTKLGDFRAPKDCILFDSEWEPLRLIANLPFIDDGPNWYGKSIHEFRKELESLGV 1381

Query: 304  IV 305
             V
Sbjct: 1382 TV 1383



 Score =  104 bits (259), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 102/196 (52%), Gaps = 11/196 (5%)

Query: 118  TEYKFPSDFSLIIRQQKWLQTRLG---DYRDPRQCILYGPEWKSI----SSITLLPFIND 170
              +   S+F   +R   WL+T +    DYR P Q   +   W SI    S +  +P ++ 
Sbjct: 968  NRHSLRSNFLNSVRGGSWLRTTMNGVSDYRPPSQSFYHTSSWGSILQNGSILVDIPLVDR 1027

Query: 171  SDNCYGMGIHEYKEELKSFGVVTELKGGLQFVPKYLKFPSDPSTITPESVFSFLECIRLL 230
            S   YG  I +YKEELK  GV+ E     +FV  +L   ++ ST +  +VFS L+ IR L
Sbjct: 1028 S--YYGNEIEKYKEELKIAGVMFEFSEVCRFVGNHLMSLAETSTQSSANVFSILKFIRYL 1085

Query: 231  MQEKKLVVEDDLTKRLSRNWLKTHAGYLPPDKCLLFGSKWDLYLKPSDGPFIDENFYG-P 289
             +EK+L   D +T   +  WLKT +GY  PD  +LF  +W      SD PFID  FYG  
Sbjct: 1086 -REKRLSPADFITAVKNGPWLKTISGYRSPDGAVLFSEEWKAASLISDIPFIDRGFYGVV 1144

Query: 290  KIASYSKELNEIGVIV 305
             +  Y +EL  +GV+V
Sbjct: 1145 SLNGYKEELELLGVVV 1160