Miyakogusa Predicted Gene

Lj0g3v0231639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0231639.1 Non Chatacterized Hit- tr|I1JN65|I1JN65_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11760
PE,92.16,0,FAD/NAD(P)-binding domain,NULL; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PNDRDTASE,CUFF.15198.1
         (422 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10230.1 | Symbols: LYC | lycopene cyclase | chr3:3164340-316...   720   0.0  
AT3G10230.2 | Symbols: LYC | lycopene cyclase | chr3:3164340-316...   649   0.0  
AT5G57030.1 | Symbols: LUT2 | Lycopene beta/epsilon cyclase prot...   266   2e-71

>AT3G10230.1 | Symbols: LYC | lycopene cyclase |
           chr3:3164340-3165845 REVERSE LENGTH=501
          Length = 501

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/403 (83%), Positives = 370/403 (91%), Gaps = 2/403 (0%)

Query: 22  QQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTKKYL 81
           QQVSEAGLSVC+IDP+P+LIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVY+D+  KK L
Sbjct: 99  QQVSEAGLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDL 158

Query: 82  DRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEESKSMLICNDGVTIQATVVLDA 141
            RPYGRVNRK LKSKMLQKCI+NGVKFHQ+KV  V+HEE+ S ++C+DGV IQA+VVLDA
Sbjct: 159 SRPYGRVNRKQLKSKMLQKCITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDA 218

Query: 142 TGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDNNMELKEKNSR 201
           TGFSR LVQYDKPYNPGYQVAYGI+AEV+ HPFDVDKM+FMDWRD HLD+  ELKE+NS+
Sbjct: 219 TGFSRCLVQYDKPYNPGYQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSK 278

Query: 202 IPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGIKVKSIEEDEHCVIP 261
           IPTFLYAMPFSS +IFLEETSLVARPGLRM+DIQ+RM ARLKHLGI VK IEEDE CVIP
Sbjct: 279 IPTFLYAMPFSSNRIFLEETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIP 338

Query: 262 MGGPLPVLPQRVIGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQYLG--SDRGISGDG 319
           MGGPLPVLPQRV+GIGGTAGMVHPSTGYMVARTLAAAPIVANAIV+YLG  S   + GD 
Sbjct: 339 MGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQ 398

Query: 320 LSSLVWKDLWPIERRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLF 379
           LS+ VW+DLWPIERRRQREFFCFGMDILLKLDL  TRRFFDAFFDL+PHYWHGFLSSRLF
Sbjct: 399 LSAEVWRDLWPIERRRQREFFCFGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLF 458

Query: 380 LPELLVFGLSLFSYASNTSRIEIMAKGTVPLVNMINNLIQDKE 422
           LPELLVFGLSLFS+ASNTSR+EIM KGTVPL  MINNL+QD++
Sbjct: 459 LPELLVFGLSLFSHASNTSRLEIMTKGTVPLAKMINNLVQDRD 501


>AT3G10230.2 | Symbols: LYC | lycopene cyclase |
           chr3:3164340-3165449 REVERSE LENGTH=369
          Length = 369

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/369 (82%), Positives = 336/369 (91%), Gaps = 2/369 (0%)

Query: 56  MDLLDCLDTTWSGAVVYIDDKTKKYLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIK 115
           MDLLDCLDTTWSGAVVY+D+  KK L RPYGRVNRK LKSKMLQKCI+NGVKFHQ+KV  
Sbjct: 1   MDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKCITNGVKFHQSKVTN 60

Query: 116 VIHEESKSMLICNDGVTIQATVVLDATGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFD 175
           V+HEE+ S ++C+DGV IQA+VVLDATGFSR LVQYDKPYNPGYQVAYGI+AEV+ HPFD
Sbjct: 61  VVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQVAYGIVAEVDGHPFD 120

Query: 176 VDKMLFMDWRDSHLDNNMELKEKNSRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQ 235
           VDKM+FMDWRD HLD+  ELKE+NS+IPTFLYAMPFSS +IFLEETSLVARPGLRM+DIQ
Sbjct: 121 VDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLRMEDIQ 180

Query: 236 DRMVARLKHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVIGIGGTAGMVHPSTGYMVARTL 295
           +RM ARLKHLGI VK IEEDE CVIPMGGPLPVLPQRV+GIGGTAGMVHPSTGYMVARTL
Sbjct: 181 ERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTL 240

Query: 296 AAAPIVANAIVQYLG--SDRGISGDGLSSLVWKDLWPIERRRQREFFCFGMDILLKLDLP 353
           AAAPIVANAIV+YLG  S   + GD LS+ VW+DLWPIERRRQREFFCFGMDILLKLDL 
Sbjct: 241 AAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRRQREFFCFGMDILLKLDLD 300

Query: 354 GTRRFFDAFFDLEPHYWHGFLSSRLFLPELLVFGLSLFSYASNTSRIEIMAKGTVPLVNM 413
            TRRFFDAFFDL+PHYWHGFLSSRLFLPELLVFGLSLFS+ASNTSR+EIM KGTVPL  M
Sbjct: 301 ATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHASNTSRLEIMTKGTVPLAKM 360

Query: 414 INNLIQDKE 422
           INNL+QD++
Sbjct: 361 INNLVQDRD 369


>AT5G57030.1 | Symbols: LUT2 | Lycopene beta/epsilon cyclase protein
           | chr5:23077398-23079818 FORWARD LENGTH=524
          Length = 524

 Score =  266 bits (680), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 149/402 (37%), Positives = 224/402 (55%), Gaps = 20/402 (4%)

Query: 23  QVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTKKYLD 82
           + ++ GL V  I P+  L + NNYGVW DEF  + L  C++  W   +VY+DD     + 
Sbjct: 126 ESAKLGLKVGLIGPD--LPFTNNYGVWEDEFNDLGLQKCIEHVWRETIVYLDDDKPITIG 183

Query: 83  RPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEESKSMLI-CNDGVTIQATVVLDA 141
           R YGRV+R+LL  ++L++C+ +GV +  +KV  +        L+ C+D   I   +   A
Sbjct: 184 RAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRLVACDDNNVIPCRLATVA 243

Query: 142 TGF-SRSLVQYD-KPYNPGYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDNNMELKEKN 199
           +G  S  L+QY+        Q AYG+  EVE  P+D D+M+FMD+RD     N +++   
Sbjct: 244 SGAASGKLLQYEVGGPRVCVQTAYGVEVEVENSPYDPDQMVFMDYRDY---TNEKVRSLE 300

Query: 200 SRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGIKVKSIEEDEHCV 259
           +  PTFLYAMP + +++F EET L ++  +  D ++ +++ RL  LGI++    E+E   
Sbjct: 301 AEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDLLKTKLMLRLDTLGIRILKTYEEEWSY 360

Query: 260 IPMGGPLPVLPQRVIGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQYLGSDRGIS-GD 318
           IP+GG LP   Q+ +  G  A MVHP+TGY V R+L+ AP  A+ I + L  +       
Sbjct: 361 IPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIAEILREETTKQINS 420

Query: 319 GLSSLVWKDLWPIERRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRL 378
            +S   W  LWP ER+RQR FF FG+ ++++ D  G R FF  FF L    W GFL S L
Sbjct: 421 NISRQAWDTLWPPERKRQRAFFLFGLALIVQFDTEGIRSFFRTFFRLPKWMWQGFLGSTL 480

Query: 379 FLPELLVFGLSLFSYASNTSRIEIMAKGTVPLVNMINNLIQD 420
              +L++F L +F  + N  R     KG      +IN+LI D
Sbjct: 481 TSGDLVLFALYMFVISPNNLR-----KG------LINHLISD 511