Miyakogusa Predicted Gene

Lj0g3v0230509.2
Show Alignment: 
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0230509.2 Non Chatacterized Hit- tr|K4BTQ5|K4BTQ5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,28.87,2e-18,seg,NULL; APOPTOTIC CHROMATIN CONDENSATION INDUCER
IN THE NUCLEUS,NULL,CUFF.15082.2
         (436 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G39680.2 | Symbols:  | SAP domain-containing protein | chr4:1...   263   1e-70
AT4G39680.1 | Symbols:  | SAP domain-containing protein | chr4:1...   263   1e-70

>AT4G39680.2 | Symbols:  | SAP domain-containing protein |
           chr4:18414604-18416938 REVERSE LENGTH=633
          Length = 633

 Score =  263 bits (673), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 164/301 (54%), Positives = 200/301 (66%), Gaps = 26/301 (8%)

Query: 52  QEPSSRNDEPVYDESNSMDVGGLHEKKASVEE-NTNNITSPDFNKTINSDDAGYPEKLNL 110
           QEPS+     V  ES+ MDV    E+K SV   + +N  + D  K  N  DAG  EKLNL
Sbjct: 262 QEPST-----VVGESHPMDVEEPLEQKTSVGGGDDSNAANADMIKENNIIDAGDSEKLNL 316

Query: 111 DRSSGDDSMEEDVPETKQFDSKFNVDELSLRDKGENIEVSIVKEENNTVVVGDGLSAGKS 170
           DRSSGD+SME D PETKQ +S      ++  DK   IE+ + KEE+        + AGK 
Sbjct: 317 DRSSGDESME-DEPETKQSES------ITSDDKSAKIEM-LSKEESRA-----DMDAGKG 363

Query: 171 DTNLDIDMSPVALADKRKYA--EQASVGNNEPAKRQRRWSTETRKGADLQST-TPRPPTT 227
            +  +    P+  +DKRK    +Q +VGNNEPAKR RRW++ + K  + Q T +  P TT
Sbjct: 364 KSPEN-KSHPLVASDKRKLPANDQEAVGNNEPAKR-RRWNSNSIKVPEAQITNSATPTTT 421

Query: 228 PKDEPVAPKRNFPRSDSFAAADAPKERIVPPSQRTPTNSLRIDRFLRPFTLKAVQELLGK 287
           P+   +  KR+F RSDS  + D PKER+VPPS + PTNSLRIDRFLRPFTLKAVQELLGK
Sbjct: 422 PRSTGL--KRDFSRSDSSVSEDGPKERVVPPSPKEPTNSLRIDRFLRPFTLKAVQELLGK 479

Query: 288 TGKVSSFWMDQIKTHCYVTYSSIEEATETRNAVYNLQWPPNGGRLLIAEYVDPEDVKMKL 347
           TG V+SFWMD IKTHCYV+Y S+EEA  TR AVYNLQWPPNGGR LIAE+V  E+VK KL
Sbjct: 480 TGNVTSFWMDHIKTHCYVSYPSVEEAAATREAVYNLQWPPNGGRHLIAEFVRAEEVKEKL 539

Query: 348 E 348
           E
Sbjct: 540 E 540


>AT4G39680.1 | Symbols:  | SAP domain-containing protein |
           chr4:18414604-18416938 REVERSE LENGTH=633
          Length = 633

 Score =  263 bits (673), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 164/301 (54%), Positives = 200/301 (66%), Gaps = 26/301 (8%)

Query: 52  QEPSSRNDEPVYDESNSMDVGGLHEKKASVEE-NTNNITSPDFNKTINSDDAGYPEKLNL 110
           QEPS+     V  ES+ MDV    E+K SV   + +N  + D  K  N  DAG  EKLNL
Sbjct: 262 QEPST-----VVGESHPMDVEEPLEQKTSVGGGDDSNAANADMIKENNIIDAGDSEKLNL 316

Query: 111 DRSSGDDSMEEDVPETKQFDSKFNVDELSLRDKGENIEVSIVKEENNTVVVGDGLSAGKS 170
           DRSSGD+SME D PETKQ +S      ++  DK   IE+ + KEE+        + AGK 
Sbjct: 317 DRSSGDESME-DEPETKQSES------ITSDDKSAKIEM-LSKEESRA-----DMDAGKG 363

Query: 171 DTNLDIDMSPVALADKRKYA--EQASVGNNEPAKRQRRWSTETRKGADLQST-TPRPPTT 227
            +  +    P+  +DKRK    +Q +VGNNEPAKR RRW++ + K  + Q T +  P TT
Sbjct: 364 KSPEN-KSHPLVASDKRKLPANDQEAVGNNEPAKR-RRWNSNSIKVPEAQITNSATPTTT 421

Query: 228 PKDEPVAPKRNFPRSDSFAAADAPKERIVPPSQRTPTNSLRIDRFLRPFTLKAVQELLGK 287
           P+   +  KR+F RSDS  + D PKER+VPPS + PTNSLRIDRFLRPFTLKAVQELLGK
Sbjct: 422 PRSTGL--KRDFSRSDSSVSEDGPKERVVPPSPKEPTNSLRIDRFLRPFTLKAVQELLGK 479

Query: 288 TGKVSSFWMDQIKTHCYVTYSSIEEATETRNAVYNLQWPPNGGRLLIAEYVDPEDVKMKL 347
           TG V+SFWMD IKTHCYV+Y S+EEA  TR AVYNLQWPPNGGR LIAE+V  E+VK KL
Sbjct: 480 TGNVTSFWMDHIKTHCYVSYPSVEEAAATREAVYNLQWPPNGGRHLIAEFVRAEEVKEKL 539

Query: 348 E 348
           E
Sbjct: 540 E 540