Miyakogusa Predicted Gene
- Lj0g3v0230509.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0230509.2 Non Chatacterized Hit- tr|K4BTQ5|K4BTQ5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,28.87,2e-18,seg,NULL; APOPTOTIC CHROMATIN CONDENSATION INDUCER
IN THE NUCLEUS,NULL,CUFF.15082.2
(436 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G39680.2 | Symbols: | SAP domain-containing protein | chr4:1... 263 1e-70
AT4G39680.1 | Symbols: | SAP domain-containing protein | chr4:1... 263 1e-70
>AT4G39680.2 | Symbols: | SAP domain-containing protein |
chr4:18414604-18416938 REVERSE LENGTH=633
Length = 633
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/301 (54%), Positives = 200/301 (66%), Gaps = 26/301 (8%)
Query: 52 QEPSSRNDEPVYDESNSMDVGGLHEKKASVEE-NTNNITSPDFNKTINSDDAGYPEKLNL 110
QEPS+ V ES+ MDV E+K SV + +N + D K N DAG EKLNL
Sbjct: 262 QEPST-----VVGESHPMDVEEPLEQKTSVGGGDDSNAANADMIKENNIIDAGDSEKLNL 316
Query: 111 DRSSGDDSMEEDVPETKQFDSKFNVDELSLRDKGENIEVSIVKEENNTVVVGDGLSAGKS 170
DRSSGD+SME D PETKQ +S ++ DK IE+ + KEE+ + AGK
Sbjct: 317 DRSSGDESME-DEPETKQSES------ITSDDKSAKIEM-LSKEESRA-----DMDAGKG 363
Query: 171 DTNLDIDMSPVALADKRKYA--EQASVGNNEPAKRQRRWSTETRKGADLQST-TPRPPTT 227
+ + P+ +DKRK +Q +VGNNEPAKR RRW++ + K + Q T + P TT
Sbjct: 364 KSPEN-KSHPLVASDKRKLPANDQEAVGNNEPAKR-RRWNSNSIKVPEAQITNSATPTTT 421
Query: 228 PKDEPVAPKRNFPRSDSFAAADAPKERIVPPSQRTPTNSLRIDRFLRPFTLKAVQELLGK 287
P+ + KR+F RSDS + D PKER+VPPS + PTNSLRIDRFLRPFTLKAVQELLGK
Sbjct: 422 PRSTGL--KRDFSRSDSSVSEDGPKERVVPPSPKEPTNSLRIDRFLRPFTLKAVQELLGK 479
Query: 288 TGKVSSFWMDQIKTHCYVTYSSIEEATETRNAVYNLQWPPNGGRLLIAEYVDPEDVKMKL 347
TG V+SFWMD IKTHCYV+Y S+EEA TR AVYNLQWPPNGGR LIAE+V E+VK KL
Sbjct: 480 TGNVTSFWMDHIKTHCYVSYPSVEEAAATREAVYNLQWPPNGGRHLIAEFVRAEEVKEKL 539
Query: 348 E 348
E
Sbjct: 540 E 540
>AT4G39680.1 | Symbols: | SAP domain-containing protein |
chr4:18414604-18416938 REVERSE LENGTH=633
Length = 633
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/301 (54%), Positives = 200/301 (66%), Gaps = 26/301 (8%)
Query: 52 QEPSSRNDEPVYDESNSMDVGGLHEKKASVEE-NTNNITSPDFNKTINSDDAGYPEKLNL 110
QEPS+ V ES+ MDV E+K SV + +N + D K N DAG EKLNL
Sbjct: 262 QEPST-----VVGESHPMDVEEPLEQKTSVGGGDDSNAANADMIKENNIIDAGDSEKLNL 316
Query: 111 DRSSGDDSMEEDVPETKQFDSKFNVDELSLRDKGENIEVSIVKEENNTVVVGDGLSAGKS 170
DRSSGD+SME D PETKQ +S ++ DK IE+ + KEE+ + AGK
Sbjct: 317 DRSSGDESME-DEPETKQSES------ITSDDKSAKIEM-LSKEESRA-----DMDAGKG 363
Query: 171 DTNLDIDMSPVALADKRKYA--EQASVGNNEPAKRQRRWSTETRKGADLQST-TPRPPTT 227
+ + P+ +DKRK +Q +VGNNEPAKR RRW++ + K + Q T + P TT
Sbjct: 364 KSPEN-KSHPLVASDKRKLPANDQEAVGNNEPAKR-RRWNSNSIKVPEAQITNSATPTTT 421
Query: 228 PKDEPVAPKRNFPRSDSFAAADAPKERIVPPSQRTPTNSLRIDRFLRPFTLKAVQELLGK 287
P+ + KR+F RSDS + D PKER+VPPS + PTNSLRIDRFLRPFTLKAVQELLGK
Sbjct: 422 PRSTGL--KRDFSRSDSSVSEDGPKERVVPPSPKEPTNSLRIDRFLRPFTLKAVQELLGK 479
Query: 288 TGKVSSFWMDQIKTHCYVTYSSIEEATETRNAVYNLQWPPNGGRLLIAEYVDPEDVKMKL 347
TG V+SFWMD IKTHCYV+Y S+EEA TR AVYNLQWPPNGGR LIAE+V E+VK KL
Sbjct: 480 TGNVTSFWMDHIKTHCYVSYPSVEEAAATREAVYNLQWPPNGGRHLIAEFVRAEEVKEKL 539
Query: 348 E 348
E
Sbjct: 540 E 540