Miyakogusa Predicted Gene

Lj0g3v0230449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0230449.1 Non Chatacterized Hit- tr|H0V768|H0V768_CAVPO
Uncharacterized protein OS=Cavia porcellus GN=MBTPS2
P,23.55,4e-18,SREBPS2PTASE,Peptidase M50, mammalian sterol-regulatory
element binding protein; Peptidase_M50,Pepti,CUFF.15060.1
         (537 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G20310.2 | Symbols:  | Peptidase M50 family protein | chr4:10...   330   2e-90
AT4G20310.3 | Symbols:  | Peptidase M50 family protein | chr4:10...   263   2e-70
AT4G20310.1 | Symbols:  | Peptidase M50 family protein | chr4:10...   253   2e-67

>AT4G20310.2 | Symbols:  | Peptidase M50 family protein |
           chr4:10961639-10963690 FORWARD LENGTH=488
          Length = 488

 Score =  330 bits (845), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 199/513 (38%), Positives = 270/513 (52%), Gaps = 64/513 (12%)

Query: 32  HHVSNTISCWYCDYKISYFNQPLFQFGRRHARFLRVWFSIGVGFALSAMLGVTLILLWEL 91
            ++ N  SC YCD KIS FN+P+F+ GRR +  L+VWFSIG+GF +++++ VT+ LL + 
Sbjct: 24  ENIENEASCCYCDLKISNFNEPIFRLGRRFSGVLKVWFSIGLGFGVASLILVTVFLLLQF 83

Query: 92  ARALHLCGGGNKL-GNVARNLLFGLPPSVSGFSLSLADAGYICISTIISVFVHEFGHAVA 150
                     N L  N   + +FG  PS     +SL+   Y+ +ST+I+V VHE GHA+A
Sbjct: 84  H--------SNPLFSNRLTSAVFGFSPSTR---VSLSGIAYVLVSTVITVSVHELGHALA 132

Query: 151 ATSEGIQIEYIAIFIAVLLPGALVAFNYELLQTFPHSTALRVYSAGIWHNXXXXXXXXXX 210
           A SEGIQ+EYIA+FIA + PG LVAF+ ++LQ+ P   ALR+Y AGIWHN          
Sbjct: 133 AASEGIQMEYIAVFIAAIFPGGLVAFDNDVLQSLPSFNALRIYCAGIWHNAVFCALCVFA 192

Query: 211 XXXXXXXXXXXYSSGHGPMVLDVPTTSPLSGYLARGDVILSVDNVPITNAREWLELNTLT 270
                      Y  G    V+DVP+ SPL GYL+ GDVI+S+D + +    EWLEL  + 
Sbjct: 193 LFLLPVMLSPFYKHGESLTVVDVPSVSPLFGYLSPGDVIVSLDGIQVHKPSEWLELAAIL 252

Query: 271 YNIQLKNINISQH---TRDFGVVNKGYCVPSFMMKESKVTELPKNQHVCPSELTAFLKVL 327
                K  N S +   +R F    KGYCVP  +++E    ++ +NQ VCP +LTAF  + 
Sbjct: 253 DKENSKTSNGSLYLGGSRRFH-HGKGYCVPISLIEEGYKGKMVENQFVCPGDLTAFRTMP 311

Query: 328 CSANITLDNGQTETDLSNSKWPVYCLNAKNVVKLNKCGDDWGLA--TTEGSGCTCSQDEF 385
           CS     +    E  +        CL+AK++VKL KCGD W     T   S C C Q + 
Sbjct: 312 CS-----NAAIREVSV--------CLDAKDIVKLQKCGDGWVTTSDTDNQSDCVCPQGDL 358

Query: 386 CLAPVQEPGMVWVEIAYSSPYHRCLHERNRFPVSETSGLKETDCGGTFIFVGDVISMAHS 445
           CL  +Q PG++W EI Y                         DC             +  
Sbjct: 359 CLQAMQSPGVLWTEITYKRT-------------------SSQDC-------------SRL 386

Query: 446 IQLTSYHPRWGVEVVAY-FPHLLERILIWTFHVSLALALLNGLPVYFLDGESILDAALSH 504
           + LT+Y PRW        FP++LER L  TFHVSLAL LLN LPVY+LDGESIL+++L  
Sbjct: 387 VHLTAYQPRWLFNFFGKSFPNILERSLTCTFHVSLALVLLNSLPVYYLDGESILESSLQS 446

Query: 505 FTSISQXXXXXXXXXXXXXXXXIFIICFFRELL 537
           FT +S                 +  + FFR  L
Sbjct: 447 FTWLSPRKKKKALQVCLVGGSLLSFLAFFRIFL 479


>AT4G20310.3 | Symbols:  | Peptidase M50 family protein |
           chr4:10962251-10963690 FORWARD LENGTH=374
          Length = 374

 Score =  263 bits (673), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 154/386 (39%), Positives = 210/386 (54%), Gaps = 27/386 (6%)

Query: 158 IEYIAIFIAVLLPGALVAFNYELLQTFPHSTALRVYSAGIWHNXXXXXXXXXXXXXXXXX 217
           +EYIA+FIA + PG LVAF+ ++LQ+ P   ALR+Y AGIWHN                 
Sbjct: 1   MEYIAVFIAAIFPGGLVAFDNDVLQSLPSFNALRIYCAGIWHNAVFCALCVFALFLLPVM 60

Query: 218 XXXXYSSGHGPMVLDVPTTSPLSGYLARGDVILSVDNVPITNAREWLELNTLTYNIQLKN 277
               Y  G    V+DVP+ SPL GYL+ GDVI+S+D + +    EWLEL  +      K 
Sbjct: 61  LSPFYKHGESLTVVDVPSVSPLFGYLSPGDVIVSLDGIQVHKPSEWLELAAILDKENSKT 120

Query: 278 INISQH---TRDFGVVNKGYCVPSFMMKESKVTELPKNQHVCPSELTAFLKVLCSANITL 334
            N S +   +R F    KGYCVP  +++E    ++ +NQ VCP +LTAF  + CS     
Sbjct: 121 SNGSLYLGGSRRFHH-GKGYCVPISLIEEGYKGKMVENQFVCPGDLTAFRTMPCS----- 174

Query: 335 DNGQTETDLSNSKWPVYCLNAKNVVKLNKCGDDWGLA--TTEGSGCTCSQDEFCLAPVQE 392
           +    E  +        CL+AK++VKL KCGD W     T   S C C Q + CL  +Q 
Sbjct: 175 NAAIREVSV--------CLDAKDIVKLQKCGDGWVTTSDTDNQSDCVCPQGDLCLQAMQS 226

Query: 393 PGMVWVEIAYSSPYHRCLHERNRFPVSETSGLKETDCGGTFIFVGDVISMAHSIQLTSYH 452
           PG++W EI Y     +   + +R  +        ++C GTF+FVGD+I+M+HS+ LT+Y 
Sbjct: 227 PGVLWTEITYKRTSSQ---DCSRLGLD----FNTSNCLGTFVFVGDLIAMSHSVHLTAYQ 279

Query: 453 PRWGVEVVAY-FPHLLERILIWTFHVSLALALLNGLPVYFLDGESILDAALSHFTSISQX 511
           PRW        FP++LER L  TFHVSLAL LLN LPVY+LDGESIL+++L  FT +S  
Sbjct: 280 PRWLFNFFGKSFPNILERSLTCTFHVSLALVLLNSLPVYYLDGESILESSLQSFTWLSPR 339

Query: 512 XXXXXXXXXXXXXXXIFIICFFRELL 537
                          +  + FFR  L
Sbjct: 340 KKKKALQVCLVGGSLLSFLAFFRIFL 365


>AT4G20310.1 | Symbols:  | Peptidase M50 family protein |
           chr4:10961639-10963283 FORWARD LENGTH=393
          Length = 393

 Score =  253 bits (647), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/383 (39%), Positives = 213/383 (55%), Gaps = 40/383 (10%)

Query: 32  HHVSNTISCWYCDYKISYFNQPLFQFGRRHARFLRVWFSIGVGFALSAMLGVTLILLWEL 91
            ++ N  SC YCD KIS FN+P+F+ GRR +  L+VWFSIG+GF +++++ VT+ LL + 
Sbjct: 24  ENIENEASCCYCDLKISNFNEPIFRLGRRFSGVLKVWFSIGLGFGVASLILVTVFLLLQF 83

Query: 92  ARALHLCGGGNKL-GNVARNLLFGLPPSVSGFSLSLADAGYICISTIISVFVHEFGHAVA 150
                     N L  N   + +FG  PS     +SL+   Y+ +ST+I+V VHE GHA+A
Sbjct: 84  H--------SNPLFSNRLTSAVFGFSPSTR---VSLSGIAYVLVSTVITVSVHELGHALA 132

Query: 151 ATSEGIQIEYIAIFIAVLLPGALVAFNYELLQTFPHSTALRVYSAGIWHNXXXXXXXXXX 210
           A SEGIQ+EYIA+FIA + PG LVAF+ ++LQ+ P   ALR+Y AGIWHN          
Sbjct: 133 AASEGIQMEYIAVFIAAIFPGGLVAFDNDVLQSLPSFNALRIYCAGIWHNAVFCALCVFA 192

Query: 211 XXXXXXXXXXXYSSGHGPMVLDVPTTSPLSGYLARGDVILSVDNVPITNAREWLELNTLT 270
                      Y  G    V+DVP+ SPL GYL+ GDVI+S+D + +    EWLEL  + 
Sbjct: 193 LFLLPVMLSPFYKHGESLTVVDVPSVSPLFGYLSPGDVIVSLDGIQVHKPSEWLELAAIL 252

Query: 271 YNIQLKNINISQH---TRDFGVVNKGYCVPSFMMKESKVTELPKNQHVCPSELTAFLKVL 327
                K  N S +   +R F    KGYCVP  +++E    ++ +NQ VCP +LTAF  + 
Sbjct: 253 DKENSKTSNGSLYLGGSRRFH-HGKGYCVPISLIEEGYKGKMVENQFVCPGDLTAFRTMP 311

Query: 328 CSANITLDNGQTETDLSNSKWPVYCLNAKNVVKLNKCGDDWGLA--TTEGSGCTCSQDEF 385
           CS     +    E  +        CL+AK++VKL KCGD W     T   S C C Q  +
Sbjct: 312 CS-----NAAIREVSV--------CLDAKDIVKLQKCGDGWVTTSDTDNQSDCVCPQ-AY 357

Query: 386 C--LAPVQEP------GMVWVEI 400
           C   + ++EP       +VW+ I
Sbjct: 358 CGQRSLIKEPRHRIALDLVWISI 380