Miyakogusa Predicted Gene

Lj0g3v0229569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0229569.1 Non Chatacterized Hit- tr|I1NIE0|I1NIE0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,59.26,4e-19,ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich
,ZF-HD homeobox protein, Cys/His-rich dimerisation,CUFF.15004.1
         (122 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14440.2 | Symbols: AtHB31, HB31, ZHD4 | homeobox protein 31 ...    89   7e-19
AT1G14440.1 | Symbols: AtHB31, HB31, ZHD4 | homeobox protein 31 ...    89   7e-19
AT2G02540.1 | Symbols: ATHB21, ZFHD4, HB21, ZHD3 | homeobox prot...    89   8e-19
AT4G24660.1 | Symbols: ATHB22, MEE68, HB22, ZHD2 | homeobox prot...    82   7e-17
AT1G75240.1 | Symbols: AtHB33, HB33, ZHD5 | homeobox protein 33 ...    79   5e-16
AT3G50890.1 | Symbols: AtHB28, HB28, ZHD7 | homeobox protein 28 ...    76   4e-15
AT5G65410.1 | Symbols: ATHB25, ZFHD2, HB25, ZHD1 | homeobox prot...    74   3e-14
AT1G74660.1 | Symbols: MIF1 | mini zinc finger 1 | chr1:28047742...    69   5e-13
AT2G18350.1 | Symbols: AtHB24, HB24, ZHD6 | homeobox protein 24 ...    67   4e-12
AT3G28917.1 | Symbols: MIF2 | mini zinc finger 2 | chr3:10925014...    64   3e-11
AT5G15210.1 | Symbols: ATHB30, ZFHD3, HB30, ZHD8 | homeobox prot...    62   7e-11
AT1G69600.1 | Symbols: ZFHD1, ATHB29, ZHD11 | zinc finger homeod...    61   2e-10
AT3G28920.1 | Symbols: AtHB34, HB34, ZHD9 | homeobox protein 34 ...    57   2e-09
AT5G39760.1 | Symbols: AtHB23, HB23, ZHD10 | homeobox protein 23...    57   3e-09
AT5G60480.1 | Symbols: AtHB26, HB26, ZHD12 | homeobox protein 26...    55   7e-09
AT1G18835.1 | Symbols: MIF3 | mini zinc finger | chr1:6496106-64...    55   8e-09
AT5G42780.1 | Symbols: AtHB27, HB27, ZHD13 | homeobox protein 27...    50   3e-07

>AT1G14440.2 | Symbols: AtHB31, HB31, ZHD4 | homeobox protein 31 |
           chr1:4939076-4940014 REVERSE LENGTH=312
          Length = 312

 Score = 89.0 bits (219), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 45/49 (91%)

Query: 26  KKIIISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           KK +I YKECLKNHAAA+GGNATDGC EFMP+G++G+++AL CSACNCH
Sbjct: 84  KKPMIKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCH 132


>AT1G14440.1 | Symbols: AtHB31, HB31, ZHD4 | homeobox protein 31 |
           chr1:4939076-4940014 REVERSE LENGTH=312
          Length = 312

 Score = 89.0 bits (219), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 45/49 (91%)

Query: 26  KKIIISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           KK +I YKECLKNHAAA+GGNATDGC EFMP+G++G+++AL CSACNCH
Sbjct: 84  KKPMIKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCH 132


>AT2G02540.1 | Symbols: ATHB21, ZFHD4, HB21, ZHD3 | homeobox protein
           21 | chr2:684302-685234 FORWARD LENGTH=310
          Length = 310

 Score = 88.6 bits (218), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 43/50 (86%)

Query: 25  EKKIIISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           EK ++I YKECLKNHAA +GGNA DGC EFMP+G+EG+++AL CS CNCH
Sbjct: 80  EKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCH 129


>AT4G24660.1 | Symbols: ATHB22, MEE68, HB22, ZHD2 | homeobox
          protein 22 | chr4:12724851-12725513 REVERSE LENGTH=220
          Length = 220

 Score = 82.4 bits (202), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 34/45 (75%), Positives = 40/45 (88%)

Query: 30 ISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
          I Y+ECLKNHA  IGG+A DGCCEFMP+G++GTLDALKC+AC CH
Sbjct: 47 IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCH 91


>AT1G75240.1 | Symbols: AtHB33, HB33, ZHD5 | homeobox protein 33 |
           chr1:28241576-28242505 FORWARD LENGTH=309
          Length = 309

 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 42/48 (87%)

Query: 27  KIIISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           K  + Y+ECLKNHAA++GG+  DGC EFMP+G+EGT++AL+C+AC+CH
Sbjct: 71  KPTVRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCH 118


>AT3G50890.1 | Symbols: AtHB28, HB28, ZHD7 | homeobox protein 28 |
           chr3:18916420-18917169 FORWARD LENGTH=249
          Length = 249

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 31/43 (72%), Positives = 36/43 (83%)

Query: 32  YKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           Y+EC KNHAA+ GG+  DGCCEFM  G+EGTL ALKC+ACNCH
Sbjct: 60  YRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCH 102


>AT5G65410.1 | Symbols: ATHB25, ZFHD2, HB25, ZHD1 | homeobox protein
           25 | chr5:26136179-26137018 FORWARD LENGTH=279
          Length = 279

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 31/45 (68%), Positives = 36/45 (80%)

Query: 30  ISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
             ++ECLKN A  IGG+A DGC EFMPAG EGT+DALKC+AC CH
Sbjct: 73  FRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCH 117


>AT1G74660.1 | Symbols: MIF1 | mini zinc finger 1 |
          chr1:28047742-28048050 REVERSE LENGTH=102
          Length = 102

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/45 (68%), Positives = 35/45 (77%)

Query: 30 ISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
          + Y EC KNHAA IGG A DGC EFM AG EGT+DAL+C+AC CH
Sbjct: 37 VRYVECQKNHAANIGGYAVDGCREFMAAGVEGTVDALRCAACGCH 81


>AT2G18350.1 | Symbols: AtHB24, HB24, ZHD6 | homeobox protein 24 |
           chr2:7971122-7971910 REVERSE LENGTH=262
          Length = 262

 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 36/43 (83%)

Query: 32  YKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           Y+EC KNHAA+ GG+  DGC EFM +G+EGT+++L C+AC+CH
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCH 124


>AT3G28917.1 | Symbols: MIF2 | mini zinc finger 2 |
          chr3:10925014-10925316 FORWARD LENGTH=100
          Length = 100

 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)

Query: 30 ISYKECLKNHAAAIGGNATDGCCEFMPA-GDEGTLDALKCSACNCH 74
          + Y EC KNHAAA+GG A DGC EFM + G+EGT+ AL C+AC CH
Sbjct: 31 VRYGECQKNHAAAVGGYAVDGCREFMASRGEEGTVAALTCAACGCH 76


>AT5G15210.1 | Symbols: ATHB30, ZFHD3, HB30, ZHD8 | homeobox protein
           30 | chr5:4937874-4938689 REVERSE LENGTH=271
          Length = 271

 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 2/52 (3%)

Query: 25  EKKIIISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLD--ALKCSACNCH 74
           E   + +YKECLKNHAA IGG+A DGC EFMP+    + D  +L C+AC CH
Sbjct: 49  EAVAVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCH 100


>AT1G69600.1 | Symbols: ZFHD1, ATHB29, ZHD11 | zinc finger
          homeodomain  1 | chr1:26182470-26183198 FORWARD
          LENGTH=242
          Length = 242

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 2/47 (4%)

Query: 30 ISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLD--ALKCSACNCH 74
          + YKECLKNHAA +GG+A DGC EFMP+    + D  +L+C+AC CH
Sbjct: 29 VCYKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCH 75


>AT3G28920.1 | Symbols: AtHB34, HB34, ZHD9 | homeobox protein 34 |
          chr3:10940598-10941536 REVERSE LENGTH=312
          Length = 312

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 2/47 (4%)

Query: 30 ISYKECLKNHAAAIGGNATDGCCEFM--PAGDEGTLDALKCSACNCH 74
          ++YKECLKNHAAAIGG+A DGC EFM  P+       +LKC+AC CH
Sbjct: 50 VTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCH 96


>AT5G39760.1 | Symbols: AtHB23, HB23, ZHD10 | homeobox protein 23 |
           chr5:15911543-15912547 FORWARD LENGTH=334
          Length = 334

 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 2/49 (4%)

Query: 28  IIISYKECLKNHAAAIGGNATDGCCEFM--PAGDEGTLDALKCSACNCH 74
           ++ +YKECLKNHAAA+GG+A DGC EFM  P+       +LKC+AC CH
Sbjct: 52  LLFTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCH 100


>AT5G60480.1 | Symbols: AtHB26, HB26, ZHD12 | homeobox protein 26
          | chr5:24323594-24324169 FORWARD LENGTH=191
          Length = 191

 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)

Query: 28 IIISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLD--ALKCSACNCH 74
          +++ Y ECLKNHA ++GG+A DGC EF P       D  +L+C AC CH
Sbjct: 1  MVVLYNECLKNHAVSLGGHALDGCGEFTPKSTTILTDPPSLRCDACGCH 49


>AT1G18835.1 | Symbols: MIF3 | mini zinc finger |
          chr1:6496106-6496372 REVERSE LENGTH=88
          Length = 88

 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 3/45 (6%)

Query: 30 ISYKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
          + Y EC KNHAA IGG A DGC EFM +G +   DAL C+AC CH
Sbjct: 24 VRYVECQKNHAANIGGYAVDGCREFMASGGD---DALTCAACGCH 65


>AT5G42780.1 | Symbols: AtHB27, HB27, ZHD13 | homeobox protein 27 |
           chr5:17154841-17155569 FORWARD LENGTH=242
          Length = 242

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 28/43 (65%), Gaps = 2/43 (4%)

Query: 32  YKECLKNHAAAIGGNATDGCCEFMPAGDEGTLDALKCSACNCH 74
           Y EC KNHAA IG  A DGC EF+ +   G  D+L C+AC CH
Sbjct: 64  YYECRKNHAADIGTTAYDGCGEFVSST--GEEDSLNCAACGCH 104