Miyakogusa Predicted Gene

Lj0g3v0229489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0229489.1 CUFF.14999.1
         (201 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G09030.1 | Symbols:  | BTB/POZ domain-containing protein | ch...   223   5e-59
AT5G41330.1 | Symbols:  | BTB/POZ domain with WD40/YVTN repeat-l...    81   4e-16

>AT3G09030.1 | Symbols:  | BTB/POZ domain-containing protein |
           chr3:2754841-2756223 FORWARD LENGTH=460
          Length = 460

 Score =  223 bits (569), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 113/199 (56%), Positives = 140/199 (70%), Gaps = 2/199 (1%)

Query: 2   VPGKLTWVPATGVLVGSAVTGGAFGYSGYIRVWDPRSGEVVWETSEPXXXXXXXXXXXXA 61
           VP KL W+PA G+LVGSAV  G FG SGYIR+WDPRS  +VWET+EP            A
Sbjct: 263 VPEKLRWLPAKGLLVGSAVQRGVFGCSGYIRIWDPRSRNIVWETNEPGSGRSTRFGDALA 322

Query: 62  AVGVDVEGLLLFKVCSKSGDVAMADMRLLGDDPWVYLNEKNPSLVASGVDGSSNVLHCYK 121
            + VDVE  +LFKVCSKSGD+ MAD+R LG+DPWVY++++NP    +G  G  +V+HCY+
Sbjct: 323 DMDVDVEDSILFKVCSKSGDLGMADIRKLGEDPWVYMSDENPGAWKAGDGGGYSVVHCYR 382

Query: 122 GQVFVGRGGELEVWSRLREAGSENAEGFYRRNFVDKRGDSERGVIKKIEGGGDRLFVSRE 181
            QV   RGG LEVWS ++E  S   +   RRNFVDK  DS+RG+I KIE GGDRLFVSRE
Sbjct: 383 KQVLAARGGALEVWSSVKEKTS--GDPIRRRNFVDKEDDSKRGMISKIEAGGDRLFVSRE 440

Query: 182 GVEGIEVWESSHSVKSISV 200
            +EG+EVWE+S     +SV
Sbjct: 441 CMEGVEVWETSSFSGVVSV 459


>AT5G41330.1 | Symbols:  | BTB/POZ domain with WD40/YVTN repeat-like
           protein | chr5:16536452-16537828 REVERSE LENGTH=458
          Length = 458

 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 17/195 (8%)

Query: 5   KLTWVPATGVLVGSAVTGGAFGYSGYIRVWDPRSGEVVWETSEPXXXXXXXXXXXXAAVG 64
           KL W+ +  +L+ S       G +G+IR WD RS  +VWE  E             + V 
Sbjct: 266 KLKWIQSCNLLMVSGSHTSPSGVNGHIRFWDVRSRNMVWEIKE--------AQDCFSDVT 317

Query: 65  VDVEGLLLFKVCSKSGDVAMADMRLLG-DDPWVYLNEKNPSLVASGVDGSSNVLHCYKGQ 123
           V      +FKV   SG+V  AD+R LG  DPWV L E+    +     G  + +  Y   
Sbjct: 318 VSDNLSAVFKVGVTSGEVFYADLRSLGTKDPWVCLGEEKKRNLNER-RGVGSKIESYGNH 376

Query: 124 VFV-GRGGELEVWSRLREAGSENA------EGFYRRNFVDKRGDSERGVIKKIEGGGDRL 176
           VF   +G  +E+WS +      NA      E  +R+N + K  DS    I  +  GG+R+
Sbjct: 377 VFCSSKGSGIELWSEVITGLVGNASRDVLEERVFRKNSLGKLADSGENKITGLAFGGNRM 436

Query: 177 FVSREGVEGIEVWES 191
           FV+R+  + ++VW+S
Sbjct: 437 FVTRKDQQSVQVWQS 451