Miyakogusa Predicted Gene
- Lj0g3v0228969.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0228969.1 Non Chatacterized Hit- tr|I1KFU7|I1KFU7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20414
PE,81.41,0,CLCHANNEL,Chloride channel, voltage gated; Domain in
cystathionine beta-synthase and ot,Cystathionin,CUFF.14948.1
(444 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55620.1 | Symbols: CLC-F, ATCLC-F, CLCF | chloride channel F... 531 e-151
AT1G55620.2 | Symbols: CLC-F, ATCLC-F | chloride channel F | chr... 529 e-150
AT4G35440.1 | Symbols: CLC-E, ATCLC-E, CLCE | chloride channel E... 180 2e-45
AT4G35440.2 | Symbols: CLC-E | chloride channel E | chr4:1683636... 179 3e-45
>AT1G55620.1 | Symbols: CLC-F, ATCLC-F, CLCF | chloride channel F |
chr1:20787338-20790313 REVERSE LENGTH=585
Length = 585
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/441 (60%), Positives = 319/441 (72%), Gaps = 11/441 (2%)
Query: 5 AELPLYLILGMLCGCVSVAMTRLVAWFNKFFEVIQEKFGLPTVVCPXXXXXXXXXXXXKY 64
AELPLYLILGMLCG VSV +RLV WF K F+ I++KFGLP +VCP KY
Sbjct: 155 AELPLYLILGMLCGAVSVVFSRLVTWFTKSFDFIKDKFGLPAIVCPALGGLGAGIIALKY 214
Query: 65 PGILYWGFTNVEEILRTGKSASAPGIWLLTQWAAAKVIATALCKGSGLVGGLYAPSLMIX 124
PGILYWGFTNVEEIL TGKSASAPGIWLL Q AAAKV+ATALCKGSGLVGGLYAPSLMI
Sbjct: 215 PGILYWGFTNVEEILHTGKSASAPGIWLLAQLAAAKVVATALCKGSGLVGGLYAPSLMIG 274
Query: 125 XXXXXXXXXXXXEVINSAIPGNAAIAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKD 184
E+IN AIPGNAA+AQPQAYALVGMAATLAS+CSVPLTSVLLLFELTKD
Sbjct: 275 AAVGAVFGGSAAEIINRAIPGNAAVAQPQAYALVGMAATLASMCSVPLTSVLLLFELTKD 334
Query: 185 YTILLPLMGAVGLAIWVPSVTNQTKESDAPDTRNLAKGYSSISHAE-DDEGNWRQGNDGN 243
Y ILLPLMGAVGLAIWVPSV NQ KESD+ + R+ +GYSS+S +E EG WR ++ +
Sbjct: 335 YRILLPLMGAVGLAIWVPSVANQGKESDSSEGRSTGRGYSSLSPSERKTEGVWRHTDNAD 394
Query: 244 GLELCIVGXXXXXXXXXXXXXXXNLKVSQAMSVLYLKVSSSTTLKDAIKCMHDNQQNCVL 303
LEL ++ +LKV + MS Y+KVSS TTL++A + ++ QNC++
Sbjct: 395 SLELTVIENPDHNSFLDEETILEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIM 454
Query: 304 VVDEEDFLEGILTYGDIRRCRXXXXXXXXXXXXALLDVNTCPVSSVCTRGISYRGQARGL 363
VVD++DFL GILT+GDIRR +LD NTCPVSSVCT+ ISYRGQ RGL
Sbjct: 455 VVDDDDFLAGILTHGDIRR-------YLSNNASTILDENTCPVSSVCTKKISYRGQERGL 507
Query: 364 LTCYPNTSLAMAKELMEAKGIKQLPVVKRGVDSSRERKRRIAGLLHYDALWHRLRKEINH 423
LTCYP+ ++ +AKELMEA+G+KQLPVVKRG + ++R++ GLLHYD++W LR E++
Sbjct: 508 LTCYPDATVGVAKELMEARGVKQLPVVKRGEVIHKGKRRKLLGLLHYDSIWTFLRDEMSR 567
Query: 424 RKSAYRNRTENNLDVITTNGH 444
R+S R + + TNGH
Sbjct: 568 RRSINDRRKDKE---VGTNGH 585
>AT1G55620.2 | Symbols: CLC-F, ATCLC-F | chloride channel F |
chr1:20787338-20790990 REVERSE LENGTH=781
Length = 781
Score = 529 bits (1363), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/441 (60%), Positives = 319/441 (72%), Gaps = 11/441 (2%)
Query: 5 AELPLYLILGMLCGCVSVAMTRLVAWFNKFFEVIQEKFGLPTVVCPXXXXXXXXXXXXKY 64
AELPLYLILGMLCG VSV +RLV WF K F+ I++KFGLP +VCP KY
Sbjct: 351 AELPLYLILGMLCGAVSVVFSRLVTWFTKSFDFIKDKFGLPAIVCPALGGLGAGIIALKY 410
Query: 65 PGILYWGFTNVEEILRTGKSASAPGIWLLTQWAAAKVIATALCKGSGLVGGLYAPSLMIX 124
PGILYWGFTNVEEIL TGKSASAPGIWLL Q AAAKV+ATALCKGSGLVGGLYAPSLMI
Sbjct: 411 PGILYWGFTNVEEILHTGKSASAPGIWLLAQLAAAKVVATALCKGSGLVGGLYAPSLMIG 470
Query: 125 XXXXXXXXXXXXEVINSAIPGNAAIAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKD 184
E+IN AIPGNAA+AQPQAYALVGMAATLAS+CSVPLTSVLLLFELTKD
Sbjct: 471 AAVGAVFGGSAAEIINRAIPGNAAVAQPQAYALVGMAATLASMCSVPLTSVLLLFELTKD 530
Query: 185 YTILLPLMGAVGLAIWVPSVTNQTKESDAPDTRNLAKGYSSISHAE-DDEGNWRQGNDGN 243
Y ILLPLMGAVGLAIWVPSV NQ KESD+ + R+ +GYSS+S +E EG WR ++ +
Sbjct: 531 YRILLPLMGAVGLAIWVPSVANQGKESDSSEGRSTGRGYSSLSPSERKTEGVWRHTDNAD 590
Query: 244 GLELCIVGXXXXXXXXXXXXXXXNLKVSQAMSVLYLKVSSSTTLKDAIKCMHDNQQNCVL 303
LEL ++ +LKV + MS Y+KVSS TTL++A + ++ QNC++
Sbjct: 591 SLELTVIENPDHNSFLDEETILEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIM 650
Query: 304 VVDEEDFLEGILTYGDIRRCRXXXXXXXXXXXXALLDVNTCPVSSVCTRGISYRGQARGL 363
VVD++DFL GILT+GDIRR +LD NTCPVSSVCT+ ISYRGQ RGL
Sbjct: 651 VVDDDDFLAGILTHGDIRR-------YLSNNASTILDENTCPVSSVCTKKISYRGQERGL 703
Query: 364 LTCYPNTSLAMAKELMEAKGIKQLPVVKRGVDSSRERKRRIAGLLHYDALWHRLRKEINH 423
LTCYP+ ++ +AKELMEA+G+KQLPVVKRG + ++R++ GLLHYD++W LR E++
Sbjct: 704 LTCYPDATVGVAKELMEARGVKQLPVVKRGEVIHKGKRRKLLGLLHYDSIWTFLRDEMSR 763
Query: 424 RKSAYRNRTENNLDVITTNGH 444
R+S R + + TNGH
Sbjct: 764 RRSINDRRKDKE---VGTNGH 781
>AT4G35440.1 | Symbols: CLC-E, ATCLC-E, CLCE | chloride channel E |
chr4:16836384-16839345 REVERSE LENGTH=710
Length = 710
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 191/394 (48%), Gaps = 35/394 (8%)
Query: 17 CGCVSVAMTRLVAWFNKFFEVIQEKFGLPTVVCPXXXXXXXXXXXXKYPGILYWGFTNVE 76
CG VS+A++R + + + + G+P V P YP +LYWGF NV+
Sbjct: 309 CGLVSLALSRCTSSMTSAVDSLNKDAGIPKAVFPVMGGLSVGIIALVYPEVLYWGFQNVD 368
Query: 77 EILRTGKSASAPGIWLLTQWAAAKVIATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXX 136
+L LL Q A K+ ATA C+ SGLVGG YAPSL I
Sbjct: 369 ILLEKRPFVKGLSADLLLQLVAVKIAATAWCRASGLVGGYYAPSLFIGGAAGMAYGKFIG 428
Query: 137 EVINSAIPGNAAI---AQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYTILLPLMG 193
+ N +I A PQAY LVGMAATLA VC VPLT+VLLLFELT+DY I+LPL+G
Sbjct: 429 LALAQNPDFNLSILEVASPQAYGLVGMAATLAGVCQVPLTAVLLLFELTQDYRIVLPLLG 488
Query: 194 AVGLAIWVPSVTN---QTKESDAPDTRNLAKGYSSISHAEDDEGNWRQGNDGNGLE--LC 248
AVG++ W+ S + +T+E+ R + S++ ++D+ N+ +E LC
Sbjct: 489 AVGMSSWITSGQSKRQETRETKETRKRKSQEAVQSLTSSDDESST----NNLCEVESSLC 544
Query: 249 IVGXXXXXXXXXXXXXXXNLKVSQAMSVLYLKVSSSTTLKDAIKCMHDNQQNCVLVVDEE 308
+ ++ VS+AM + V ST+L++A+ M +Q+C L+VD +
Sbjct: 545 L-----DDSLNQSEELPKSIFVSEAMRTRFATVMMSTSLEEALTRMLIEKQSCALIVDPD 599
Query: 309 DFLEGILTYGDIRRCRXXXXXXXXXXXXALLDVNTCP----VSSVCTRGISYRGQARGLL 364
+ GILT DI+ A + N P V+ +C+R G+ +
Sbjct: 600 NIFLGILTLSDIQE-----------FSKARKEGNNRPKDIFVNDICSRS---GGKCKVPW 645
Query: 365 TCYPNTSLAMAKELMEAKGIKQLPVVKRGVDSSR 398
T P+ L A+ +M + + VV +D+ R
Sbjct: 646 TVTPDMDLLAAQTIMNKHELSHVAVVSGSIDAPR 679
>AT4G35440.2 | Symbols: CLC-E | chloride channel E |
chr4:16836367-16839345 REVERSE LENGTH=749
Length = 749
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 191/394 (48%), Gaps = 35/394 (8%)
Query: 17 CGCVSVAMTRLVAWFNKFFEVIQEKFGLPTVVCPXXXXXXXXXXXXKYPGILYWGFTNVE 76
CG VS+A++R + + + + G+P V P YP +LYWGF NV+
Sbjct: 309 CGLVSLALSRCTSSMTSAVDSLNKDAGIPKAVFPVMGGLSVGIIALVYPEVLYWGFQNVD 368
Query: 77 EILRTGKSASAPGIWLLTQWAAAKVIATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXX 136
+L LL Q A K+ ATA C+ SGLVGG YAPSL I
Sbjct: 369 ILLEKRPFVKGLSADLLLQLVAVKIAATAWCRASGLVGGYYAPSLFIGGAAGMAYGKFIG 428
Query: 137 EVINSAIPGNAAI---AQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYTILLPLMG 193
+ N +I A PQAY LVGMAATLA VC VPLT+VLLLFELT+DY I+LPL+G
Sbjct: 429 LALAQNPDFNLSILEVASPQAYGLVGMAATLAGVCQVPLTAVLLLFELTQDYRIVLPLLG 488
Query: 194 AVGLAIWVPSVTN---QTKESDAPDTRNLAKGYSSISHAEDDEGNWRQGNDGNGLE--LC 248
AVG++ W+ S + +T+E+ R + S++ ++D+ N+ +E LC
Sbjct: 489 AVGMSSWITSGQSKRQETRETKETRKRKSQEAVQSLTSSDDESST----NNLCEVESSLC 544
Query: 249 IVGXXXXXXXXXXXXXXXNLKVSQAMSVLYLKVSSSTTLKDAIKCMHDNQQNCVLVVDEE 308
+ ++ VS+AM + V ST+L++A+ M +Q+C L+VD +
Sbjct: 545 L-----DDSLNQSEELPKSIFVSEAMRTRFATVMMSTSLEEALTRMLIEKQSCALIVDPD 599
Query: 309 DFLEGILTYGDIRRCRXXXXXXXXXXXXALLDVNTCP----VSSVCTRGISYRGQARGLL 364
+ GILT DI+ A + N P V+ +C+R G+ +
Sbjct: 600 NIFLGILTLSDIQE-----------FSKARKEGNNRPKDIFVNDICSRS---GGKCKVPW 645
Query: 365 TCYPNTSLAMAKELMEAKGIKQLPVVKRGVDSSR 398
T P+ L A+ +M + + VV +D+ R
Sbjct: 646 TVTPDMDLLAAQTIMNKHELSHVAVVSGSIDAPR 679