Miyakogusa Predicted Gene
- Lj0g3v0228939.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0228939.1 tr|B9PCF4|B9PCF4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_795095 PE=4 SV=1,61.76,6e-17,GB
DEF: F14N23.28,NULL; FAMILY NOT NAMED,NULL; seg,NULL; Cullin
repeat-like,Cullin repeat-like-conta,CUFF.14945.1
(445 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G10385.1 | Symbols: | Vps51/Vps67 family (components of vesi... 394 e-110
AT5G49830.3 | Symbols: EXO84B | exocyst complex component 84B | ... 358 6e-99
AT5G49830.1 | Symbols: EXO84B | exocyst complex component 84B | ... 357 8e-99
AT5G49830.2 | Symbols: EXO84B | exocyst complex component 84B | ... 357 9e-99
AT1G10180.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 149 4e-36
>AT1G10385.1 | Symbols: | Vps51/Vps67 family (components of
vesicular transport) protein | chr1:3403224-3405856
FORWARD LENGTH=754
Length = 754
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/457 (51%), Positives = 290/457 (63%), Gaps = 30/457 (6%)
Query: 1 MRNLLSTQAALVHGVADGCQLSSLMTGNEDS-------DMDNILNEKTDISKTEKWLIGY 53
MRNLLS QAALVHG+ADG +SSL + D DMDN +S E W++ +
Sbjct: 101 MRNLLSAQAALVHGLADGVHISSLCADDADDLRDEDLYDMDN-----KQLSNIENWVVEF 155
Query: 54 LETLEVLLAEKRVDEAMAALDEGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAGQL 113
+ LEVLLAEKRV+E+MAAL+EG ++A E E RT LSP+ +L +AI E RQ+LA QL
Sbjct: 156 FDRLEVLLAEKRVEESMAALEEGRRVAVEAHEKRT-LSPTTLLSLNNAIKEKRQELADQL 214
Query: 114 AETLSQASTRSAEIRSTALALKILGDGPRAHTLLLNSHKEKLQRGMQSIHS--TSYGGVG 171
AE +SQ STR E+RS L+LK LGDG RAHTLLL S++ +LQ +QS+ + TSYG
Sbjct: 215 AEAISQPSTRGGELRSAVLSLKKLGDGSRAHTLLLRSYERRLQANIQSLRASNTSYGV-- 272
Query: 172 AYTSALSQLVFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSEHFALLLKKRILASTA 231
A+ +ALSQLVFSTI+QAASDS V E+ PAYTSELV+WAV Q+E FALLLK+ LAS+A
Sbjct: 273 AFAAALSQLVFSTIAQAASDSQAVVGED-PAYTSELVTWAVKQAESFALLLKRHTLASSA 331
Query: 232 AAGGLRIASECVHVCLNHCHLLEASGMTLSPVLLKHFKPFVEQALNTNLKRIEQSSXXXX 291
AAG LR+ +ECV +C +HC LE+ G+ LSPVLLKHF+P VEQAL NLKRIEQSS
Sbjct: 332 AAGSLRVTAECVQLCASHCSSLESRGLALSPVLLKHFRPGVEQALTGNLKRIEQSSAALA 391
Query: 292 XXXXXXXXXXPT-SRSSGLPPTSSYSNLSSFQPKLSSSAHKFNSMVQELFEDVGPL-ESX 349
PT SR+S PT+ + KLS SA +FNSMVQE ED GPL E+
Sbjct: 392 ASDDWSLSYTPTGSRASSTTPTAPH-------LKLSISAQRFNSMVQEFLEDAGPLDEAL 444
Query: 350 XXXXXXXXXXXXVFGFYVNLLIDALPASIVTENLEGSGHKIVKIAETEEQQIXXXXXXXX 409
VF YV+LLI+ALP S EN E H+IVK+AETE QQ
Sbjct: 445 QLDGIALDGVLQVFNSYVDLLINALPGS--AENEENPVHRIVKVAETESQQTALLVNALL 502
Query: 410 XXXXXXPRAVVKLSHSTRGDESQRRG-PDKQRPPEQR 445
PR+ ++ + RRG D+Q PEQR
Sbjct: 503 LADELIPRSASRILPQGTSQSTPRRGSSDRQNRPEQR 539
>AT5G49830.3 | Symbols: EXO84B | exocyst complex component 84B |
chr5:20250803-20254766 REVERSE LENGTH=783
Length = 783
Score = 358 bits (918), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 228/453 (50%), Positives = 289/453 (63%), Gaps = 22/453 (4%)
Query: 1 MRNLLSTQAALVHGVADGCQLSSLMTGNEDSDMDNILN-EKTDISKTEKWLIGYLETLEV 59
+RNLLSTQA L+HG+ADG + +E S + +LN E +S EKW + + L+
Sbjct: 126 IRNLLSTQATLIHGLADGVNIDDDKVSDE-SLANGLLNFEDNGLSDLEKWATEFPDHLDA 184
Query: 60 LLAEKRVDEAMAALDEGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAGQLAETLSQ 119
LLAE+RVDEA+AA DEGE + + +E + TLS S+ +LQ AI E +QKLA QLA+ Q
Sbjct: 185 LLAERRVDEALAAFDEGEILVSQANE-KHTLSSSVLSSLQFAIAERKQKLADQLAKAACQ 243
Query: 120 ASTRSAEIRSTALALKILGDGPRAHTLLLNSHKEKLQRGMQSIH--STSYGGVGAYTSAL 177
STR E+RS ALK LGDGPRAHT+LL++H ++ Q MQS+ STSYGG AYT+AL
Sbjct: 244 PSTRGGELRSAIAALKRLGDGPRAHTVLLDAHFQRYQYNMQSLRPSSTSYGG--AYTAAL 301
Query: 178 SQLVFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSEHFALLLKKRILASTAAAGGLR 237
SQLVFS ISQA+SDSL +F +E PAY+SELV+WA Q+E F+LL+K+ LAS+AAAGGLR
Sbjct: 302 SQLVFSAISQASSDSLGIFGKE-PAYSSELVTWATKQTEAFSLLVKRHALASSAAAGGLR 360
Query: 238 IASECVHVCLNHCHLLEASGMTLSPVLLKHFKPFVEQALNTNLKRIEQSSXXXXXXXXXX 297
A+EC + L HC LLEA G++L PVLLKHFKP VEQAL NLKRIE+++
Sbjct: 361 AAAECAQIALGHCSLLEARGLSLCPVLLKHFKPIVEQALEANLKRIEENTAAMAAADDWV 420
Query: 298 XXXXPTSRSSGLPPTSSYSNLSSFQPKLSSSAHKFNSMVQELFEDVGPLESXXXXXXXXX 357
PP S ++FQ KL+SSAH+FN MVQ+ FEDVGPL S
Sbjct: 421 LTS---------PPAGSRHASTAFQNKLTSSAHRFNLMVQDFFEDVGPLLSMQLGSKALE 471
Query: 358 XXXXVFGFYVNLLIDALPASIVTE--NLEGSGHKIVKIAETEEQQIXXXXXXXXXXXXXX 415
VF YV++L+ ALP SI E N E S +KIV++AETE Q+
Sbjct: 472 GLFRVFNSYVDVLVRALPGSIEEEDPNFESSCNKIVQMAETEANQLALLANASLLADELL 531
Query: 416 PRAVVKLSHSTRGDESQ--RRGPDKQ-RPPEQR 445
PRA +KLS G + RR D+Q R PEQR
Sbjct: 532 PRAAMKLSLDQTGQRTDDLRRPLDRQNRNPEQR 564
>AT5G49830.1 | Symbols: EXO84B | exocyst complex component 84B |
chr5:20250803-20254766 REVERSE LENGTH=752
Length = 752
Score = 357 bits (917), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 228/453 (50%), Positives = 289/453 (63%), Gaps = 22/453 (4%)
Query: 1 MRNLLSTQAALVHGVADGCQLSSLMTGNEDSDMDNILN-EKTDISKTEKWLIGYLETLEV 59
+RNLLSTQA L+HG+ADG + +E S + +LN E +S EKW + + L+
Sbjct: 95 IRNLLSTQATLIHGLADGVNIDDDKVSDE-SLANGLLNFEDNGLSDLEKWATEFPDHLDA 153
Query: 60 LLAEKRVDEAMAALDEGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAGQLAETLSQ 119
LLAE+RVDEA+AA DEGE + + +E + TLS S+ +LQ AI E +QKLA QLA+ Q
Sbjct: 154 LLAERRVDEALAAFDEGEILVSQANE-KHTLSSSVLSSLQFAIAERKQKLADQLAKAACQ 212
Query: 120 ASTRSAEIRSTALALKILGDGPRAHTLLLNSHKEKLQRGMQSIH--STSYGGVGAYTSAL 177
STR E+RS ALK LGDGPRAHT+LL++H ++ Q MQS+ STSYGG AYT+AL
Sbjct: 213 PSTRGGELRSAIAALKRLGDGPRAHTVLLDAHFQRYQYNMQSLRPSSTSYGG--AYTAAL 270
Query: 178 SQLVFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSEHFALLLKKRILASTAAAGGLR 237
SQLVFS ISQA+SDSL +F +E PAY+SELV+WA Q+E F+LL+K+ LAS+AAAGGLR
Sbjct: 271 SQLVFSAISQASSDSLGIFGKE-PAYSSELVTWATKQTEAFSLLVKRHALASSAAAGGLR 329
Query: 238 IASECVHVCLNHCHLLEASGMTLSPVLLKHFKPFVEQALNTNLKRIEQSSXXXXXXXXXX 297
A+EC + L HC LLEA G++L PVLLKHFKP VEQAL NLKRIE+++
Sbjct: 330 AAAECAQIALGHCSLLEARGLSLCPVLLKHFKPIVEQALEANLKRIEENTAAMAAADDWV 389
Query: 298 XXXXPTSRSSGLPPTSSYSNLSSFQPKLSSSAHKFNSMVQELFEDVGPLESXXXXXXXXX 357
PP S ++FQ KL+SSAH+FN MVQ+ FEDVGPL S
Sbjct: 390 LTS---------PPAGSRHASTAFQNKLTSSAHRFNLMVQDFFEDVGPLLSMQLGSKALE 440
Query: 358 XXXXVFGFYVNLLIDALPASIVTE--NLEGSGHKIVKIAETEEQQIXXXXXXXXXXXXXX 415
VF YV++L+ ALP SI E N E S +KIV++AETE Q+
Sbjct: 441 GLFRVFNSYVDVLVRALPGSIEEEDPNFESSCNKIVQMAETEANQLALLANASLLADELL 500
Query: 416 PRAVVKLSHSTRGDESQ--RRGPDKQ-RPPEQR 445
PRA +KLS G + RR D+Q R PEQR
Sbjct: 501 PRAAMKLSLDQTGQRTDDLRRPLDRQNRNPEQR 533
>AT5G49830.2 | Symbols: EXO84B | exocyst complex component 84B |
chr5:20250803-20254766 REVERSE LENGTH=814
Length = 814
Score = 357 bits (916), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 228/453 (50%), Positives = 289/453 (63%), Gaps = 22/453 (4%)
Query: 1 MRNLLSTQAALVHGVADGCQLSSLMTGNEDSDMDNILN-EKTDISKTEKWLIGYLETLEV 59
+RNLLSTQA L+HG+ADG + +E S + +LN E +S EKW + + L+
Sbjct: 157 IRNLLSTQATLIHGLADGVNIDDDKVSDE-SLANGLLNFEDNGLSDLEKWATEFPDHLDA 215
Query: 60 LLAEKRVDEAMAALDEGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAGQLAETLSQ 119
LLAE+RVDEA+AA DEGE + + +E + TLS S+ +LQ AI E +QKLA QLA+ Q
Sbjct: 216 LLAERRVDEALAAFDEGEILVSQANE-KHTLSSSVLSSLQFAIAERKQKLADQLAKAACQ 274
Query: 120 ASTRSAEIRSTALALKILGDGPRAHTLLLNSHKEKLQRGMQSIH--STSYGGVGAYTSAL 177
STR E+RS ALK LGDGPRAHT+LL++H ++ Q MQS+ STSYGG AYT+AL
Sbjct: 275 PSTRGGELRSAIAALKRLGDGPRAHTVLLDAHFQRYQYNMQSLRPSSTSYGG--AYTAAL 332
Query: 178 SQLVFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSEHFALLLKKRILASTAAAGGLR 237
SQLVFS ISQA+SDSL +F +E PAY+SELV+WA Q+E F+LL+K+ LAS+AAAGGLR
Sbjct: 333 SQLVFSAISQASSDSLGIFGKE-PAYSSELVTWATKQTEAFSLLVKRHALASSAAAGGLR 391
Query: 238 IASECVHVCLNHCHLLEASGMTLSPVLLKHFKPFVEQALNTNLKRIEQSSXXXXXXXXXX 297
A+EC + L HC LLEA G++L PVLLKHFKP VEQAL NLKRIE+++
Sbjct: 392 AAAECAQIALGHCSLLEARGLSLCPVLLKHFKPIVEQALEANLKRIEENTAAMAAADDWV 451
Query: 298 XXXXPTSRSSGLPPTSSYSNLSSFQPKLSSSAHKFNSMVQELFEDVGPLESXXXXXXXXX 357
PP S ++FQ KL+SSAH+FN MVQ+ FEDVGPL S
Sbjct: 452 LTS---------PPAGSRHASTAFQNKLTSSAHRFNLMVQDFFEDVGPLLSMQLGSKALE 502
Query: 358 XXXXVFGFYVNLLIDALPASIVTE--NLEGSGHKIVKIAETEEQQIXXXXXXXXXXXXXX 415
VF YV++L+ ALP SI E N E S +KIV++AETE Q+
Sbjct: 503 GLFRVFNSYVDVLVRALPGSIEEEDPNFESSCNKIVQMAETEANQLALLANASLLADELL 562
Query: 416 PRAVVKLSHSTRGDESQ--RRGPDKQ-RPPEQR 445
PRA +KLS G + RR D+Q R PEQR
Sbjct: 563 PRAAMKLSLDQTGQRTDDLRRPLDRQNRNPEQR 595
>AT1G10180.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: exocyst complex component 84B (TAIR:AT5G49830.1);
Has 132 Blast hits to 132 proteins in 25 species: Archae
- 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 117;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
| chr1:3338381-3341494 REVERSE LENGTH=769
Length = 769
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 210/436 (48%), Gaps = 39/436 (8%)
Query: 1 MRNLLSTQAALVHGVADG-CQ----LSSLMTGNEDSDM--DNILNEKTDISKTEKWLIGY 53
+R +S+Q LV + G C+ + L D+++ D + NE TD K+E +
Sbjct: 79 LRKHISSQGILVQDLMAGVCREMDDWNRLPGDVHDAEVEEDPLPNEVTD-PKSE-----F 132
Query: 54 LETLEVLLAEKRVDEAMAALDEGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAGQL 113
LE +++LLAE +VDEA+ A+D E+ + ++ +G +S + + A E + L QL
Sbjct: 133 LEKIDLLLAEHKVDEALEAMDAEERSSPDL-KGSVEMS-----SYKSAFMERKAVLEDQL 186
Query: 114 AETLSQASTRSAEIRSTALALKILGDGPRAHTLLLNSHKEKLQRGMQSIHSTSYGGVGAY 173
Q S AE++ + L LG GP AH LLL + L+R +++ + +
Sbjct: 187 LRIAKQPSICVAELKHALIGLIRLGKGPSAHQLLLKFYATSLRRRIEAFLPSCLTCPNTF 246
Query: 174 TSALSQLVFSTISQAASDSLTVFAEEE-PAYTSELVSWAVTQSEHFALLLKKRILASTAA 232
+ LS+LVFS IS A +S +F +++ PAY++++V WA + E+ L+K+ + +
Sbjct: 247 PATLSKLVFSNISVATKESAAMFGDDDNPAYSNKVVQWAEREVEYLVRLVKENA-SPSET 305
Query: 233 AGGLRIASECVHVCLNHCHLLEASGMTLSPVLLKHFKPFVEQALNTNLKRIEQSSXXXXX 292
A LR AS C+ CLN+C +LE G+ LS + L F+P+VE+ L N +R +
Sbjct: 306 ASALRAASICLQDCLNYCKVLEPQGLFLSKLFLVLFRPYVEEVLELNFRRARRVIFDL-- 363
Query: 293 XXXXXXXXXPTSRSSGL-PPTSSYSNLSSF----QPKLSSSAHKFNSMVQELFEDVGPLE 347
GL P+ + LS F ++ + +F +VQ++ E + L
Sbjct: 364 ----------NETDEGLESPSDFVTILSEFAIASDTMMTDCSIRFMQIVQDILEQLTHLV 413
Query: 348 SXXXXXXXXXXXXXVFGFYVNLLIDALPASIVTENL-EGSGHKIVKIAETEEQQIXXXXX 406
++ Y++ LI ALP + L E + ++ AET+ +Q+
Sbjct: 414 VLHFGESVLTRILQLYDKYIDFLIKALPGHSDEDGLPELQDNTVLARAETDSEQLALLGA 473
Query: 407 XXXXXXXXXPRAVVKL 422
PR++VK+
Sbjct: 474 AFTILDELLPRSLVKV 489