Miyakogusa Predicted Gene

Lj0g3v0228619.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0228619.1 Non Chatacterized Hit- tr|I0YZF3|I0YZF3_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,37.11,2e-18,SIN3B-RELATED,NULL,CUFF.14920.1
         (150 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G70060.1 | Symbols: SNL4 | SIN3-like 4 | chr1:26383789-263895...   196   5e-51
AT5G15020.1 | Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569...   183   5e-47
AT5G15020.2 | Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569...   183   5e-47
AT1G24190.2 | Symbols: SNL3 | SIN3-like 3 | chr1:8563858-8569927...   182   6e-47
AT1G24190.1 | Symbols: SIN3, ATSIN3, SNL3 | SIN3-like 3 | chr1:8...   182   6e-47
AT1G59890.4 | Symbols: SNL5 | SIN3-like 5 | chr1:22044326-220508...   172   8e-44
AT1G59890.1 | Symbols: SNL5 | SIN3-like 5 | chr1:22044326-220506...   172   8e-44
AT1G59890.2 | Symbols: SNL5 | SIN3-like 5 | chr1:22044326-220506...   172   9e-44
AT1G59890.3 | Symbols: SNL5 | SIN3-like 5 | chr1:22044326-220506...   172   9e-44
AT3G01320.2 | Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 F...   162   6e-41
AT3G01320.1 | Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 F...   162   6e-41
AT1G10450.1 | Symbols: SNL6 | SIN3-like 6 | chr1:3432313-3437979...   155   7e-39

>AT1G70060.1 | Symbols: SNL4 | SIN3-like 4 | chr1:26383789-26389568
            FORWARD LENGTH=1326
          Length = 1326

 Score =  196 bits (498), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 97/151 (64%), Positives = 119/151 (78%), Gaps = 4/151 (2%)

Query: 1    MDNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECS-AAPTRLSIQLMRYGH 59
            MDNKL QL+ YE+SRKP KF+D VY+ENA VLLPDE+IYRIEC  + P++LSIQL+ YGH
Sbjct: 1142 MDNKLQQLYAYEKSRKPEKFLDAVYYENALVLLPDEDIYRIECEQSTPSKLSIQLLDYGH 1201

Query: 60   DKPEVAAVTMDPNFSAYLHNDFLSVVPDKKEKSGIFLKRNKRKYASIDDEHSSQVMDGLQ 119
            DKP+V +++MDP F+AYLHN FLS  P+ KE   I+LKRNKRK    DDE  +   D ++
Sbjct: 1202 DKPDVTSISMDPTFAAYLHNVFLSYQPNAKENPRIYLKRNKRKNGG-DDELCT--TDEVK 1258

Query: 120  VINGLECKIACNSSKVSYVLDTEDFLFRTRR 150
            +INGLECKI C+SSKVSYVLDTED L R +R
Sbjct: 1259 IINGLECKITCSSSKVSYVLDTEDVLHRAKR 1289


>AT5G15020.1 | Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569
            REVERSE LENGTH=1367
          Length = 1367

 Score =  183 bits (464), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 87/151 (57%), Positives = 116/151 (76%), Gaps = 1/151 (0%)

Query: 1    MDNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECSAAPTRLSIQLMRYGHD 60
            MDNKLLQL+ YE SR+PG+  D VY+ENAR+LL +ENIYR+ECS++P+RLSIQLM    +
Sbjct: 1189 MDNKLLQLYEYENSRRPGRVFDSVYYENARILLHEENIYRLECSSSPSRLSIQLMDNIIE 1248

Query: 61   KPEVAAVTMDPNFSAYLHNDFLSVVPDKKEKSGIFLKRNKRKYASIDD-EHSSQVMDGLQ 119
            KP+  AV+M+P F++YL N+FLS    KKE   I L+RN R Y  +DD   + + M+G+Q
Sbjct: 1249 KPDAYAVSMEPTFTSYLQNEFLSNSSGKKELQDIVLQRNMRGYNGLDDLAVACKAMEGVQ 1308

Query: 120  VINGLECKIACNSSKVSYVLDTEDFLFRTRR 150
            VINGLECK++C+S K+SYVLDTEDF  R ++
Sbjct: 1309 VINGLECKMSCSSYKISYVLDTEDFFHRKKK 1339


>AT5G15020.2 | Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569
            REVERSE LENGTH=1355
          Length = 1355

 Score =  183 bits (464), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 87/151 (57%), Positives = 116/151 (76%), Gaps = 1/151 (0%)

Query: 1    MDNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECSAAPTRLSIQLMRYGHD 60
            MDNKLLQL+ YE SR+PG+  D VY+ENAR+LL +ENIYR+ECS++P+RLSIQLM    +
Sbjct: 1177 MDNKLLQLYEYENSRRPGRVFDSVYYENARILLHEENIYRLECSSSPSRLSIQLMDNIIE 1236

Query: 61   KPEVAAVTMDPNFSAYLHNDFLSVVPDKKEKSGIFLKRNKRKYASIDD-EHSSQVMDGLQ 119
            KP+  AV+M+P F++YL N+FLS    KKE   I L+RN R Y  +DD   + + M+G+Q
Sbjct: 1237 KPDAYAVSMEPTFTSYLQNEFLSNSSGKKELQDIVLQRNMRGYNGLDDLAVACKAMEGVQ 1296

Query: 120  VINGLECKIACNSSKVSYVLDTEDFLFRTRR 150
            VINGLECK++C+S K+SYVLDTEDF  R ++
Sbjct: 1297 VINGLECKMSCSSYKISYVLDTEDFFHRKKK 1327


>AT1G24190.2 | Symbols: SNL3 | SIN3-like 3 | chr1:8563858-8569927
            REVERSE LENGTH=1326
          Length = 1326

 Score =  182 bits (463), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 90/151 (59%), Positives = 114/151 (75%), Gaps = 3/151 (1%)

Query: 1    MDNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECS-AAPTRLSIQLMRYGH 59
            MDNKLLQL+ YE+SR+P    D VY++N RVLLPDENIYRIEC  + P +LSIQLM  G 
Sbjct: 1152 MDNKLLQLYFYEKSRRPETIFDAVYYDNTRVLLPDENIYRIECRLSTPAKLSIQLMCNGL 1211

Query: 60   DKPEVAAVTMDPNFSAYLHNDFLSVVPDKKEKSGIFLKRNKRKYASIDDEHSSQVMDGLQ 119
            DKP+V +V++DP F+AYLHNDFLS+ P+ +E   I+L RNKRK    D++  S   D ++
Sbjct: 1212 DKPDVTSVSIDPTFAAYLHNDFLSIQPNAREDRRIYLNRNKRKVCREDEQLYS--TDEVK 1269

Query: 120  VINGLECKIACNSSKVSYVLDTEDFLFRTRR 150
            + NGLECKIAC SSKVSYVL+TED L R ++
Sbjct: 1270 IKNGLECKIACGSSKVSYVLETEDLLVRVKK 1300


>AT1G24190.1 | Symbols: SIN3, ATSIN3, SNL3 | SIN3-like 3 |
            chr1:8563858-8569927 REVERSE LENGTH=1330
          Length = 1330

 Score =  182 bits (463), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 90/151 (59%), Positives = 114/151 (75%), Gaps = 3/151 (1%)

Query: 1    MDNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECS-AAPTRLSIQLMRYGH 59
            MDNKLLQL+ YE+SR+P    D VY++N RVLLPDENIYRIEC  + P +LSIQLM  G 
Sbjct: 1156 MDNKLLQLYFYEKSRRPETIFDAVYYDNTRVLLPDENIYRIECRLSTPAKLSIQLMCNGL 1215

Query: 60   DKPEVAAVTMDPNFSAYLHNDFLSVVPDKKEKSGIFLKRNKRKYASIDDEHSSQVMDGLQ 119
            DKP+V +V++DP F+AYLHNDFLS+ P+ +E   I+L RNKRK    D++  S   D ++
Sbjct: 1216 DKPDVTSVSIDPTFAAYLHNDFLSIQPNAREDRRIYLNRNKRKVCREDEQLYS--TDEVK 1273

Query: 120  VINGLECKIACNSSKVSYVLDTEDFLFRTRR 150
            + NGLECKIAC SSKVSYVL+TED L R ++
Sbjct: 1274 IKNGLECKIACGSSKVSYVLETEDLLVRVKK 1304


>AT1G59890.4 | Symbols: SNL5 | SIN3-like 5 | chr1:22044326-22050812
            FORWARD LENGTH=1152
          Length = 1152

 Score =  172 bits (436), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 87/151 (57%), Positives = 110/151 (72%), Gaps = 3/151 (1%)

Query: 2    DNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECSAAPTRLSIQLMRYGHDK 61
            D KLLQL+ YE  RKPG+F D+VYHENAR LL D+NIYRIE S+A TRL IQLM   +D+
Sbjct: 971  DTKLLQLYAYENYRKPGRFFDIVYHENARALLHDQNIYRIEYSSAQTRLGIQLMNSWNDQ 1030

Query: 62   PEVAAVTMDPNFSAYLHNDFLSVVPDKKEKSGIFLKRNKRKYASIDDEH--SSQVMDGLQ 119
            PEV AVT++P F+ YL NDFLS V D +EK G+FLKRNK K +   +E    S+ ++GL 
Sbjct: 1031 PEVTAVTVEPGFANYLQNDFLSFVSD-EEKPGLFLKRNKAKLSGPGEESLGMSRALEGLN 1089

Query: 120  VINGLECKIACNSSKVSYVLDTEDFLFRTRR 150
            +IN +ECKIAC+S KV Y   T D L+R ++
Sbjct: 1090 IINEVECKIACSSFKVKYEPHTADLLYRRKQ 1120


>AT1G59890.1 | Symbols: SNL5 | SIN3-like 5 | chr1:22044326-22050670
            FORWARD LENGTH=1162
          Length = 1162

 Score =  172 bits (436), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 87/151 (57%), Positives = 110/151 (72%), Gaps = 3/151 (1%)

Query: 2    DNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECSAAPTRLSIQLMRYGHDK 61
            D KLLQL+ YE  RKPG+F D+VYHENAR LL D+NIYRIE S+A TRL IQLM   +D+
Sbjct: 971  DTKLLQLYAYENYRKPGRFFDIVYHENARALLHDQNIYRIEYSSAQTRLGIQLMNSWNDQ 1030

Query: 62   PEVAAVTMDPNFSAYLHNDFLSVVPDKKEKSGIFLKRNKRKYASIDDEH--SSQVMDGLQ 119
            PEV AVT++P F+ YL NDFLS V D +EK G+FLKRNK K +   +E    S+ ++GL 
Sbjct: 1031 PEVTAVTVEPGFANYLQNDFLSFVSD-EEKPGLFLKRNKAKLSGPGEESLGMSRALEGLN 1089

Query: 120  VINGLECKIACNSSKVSYVLDTEDFLFRTRR 150
            +IN +ECKIAC+S KV Y   T D L+R ++
Sbjct: 1090 IINEVECKIACSSFKVKYEPHTADLLYRRKQ 1120


>AT1G59890.2 | Symbols: SNL5 | SIN3-like 5 | chr1:22044326-22050670
            FORWARD LENGTH=1167
          Length = 1167

 Score =  172 bits (435), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 87/151 (57%), Positives = 110/151 (72%), Gaps = 3/151 (1%)

Query: 2    DNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECSAAPTRLSIQLMRYGHDK 61
            D KLLQL+ YE  RKPG+F D+VYHENAR LL D+NIYRIE S+A TRL IQLM   +D+
Sbjct: 976  DTKLLQLYAYENYRKPGRFFDIVYHENARALLHDQNIYRIEYSSAQTRLGIQLMNSWNDQ 1035

Query: 62   PEVAAVTMDPNFSAYLHNDFLSVVPDKKEKSGIFLKRNKRKYASIDDEH--SSQVMDGLQ 119
            PEV AVT++P F+ YL NDFLS V D +EK G+FLKRNK K +   +E    S+ ++GL 
Sbjct: 1036 PEVTAVTVEPGFANYLQNDFLSFVSD-EEKPGLFLKRNKAKLSGPGEESLGMSRALEGLN 1094

Query: 120  VINGLECKIACNSSKVSYVLDTEDFLFRTRR 150
            +IN +ECKIAC+S KV Y   T D L+R ++
Sbjct: 1095 IINEVECKIACSSFKVKYEPHTADLLYRRKQ 1125


>AT1G59890.3 | Symbols: SNL5 | SIN3-like 5 | chr1:22044326-22050670
            FORWARD LENGTH=1158
          Length = 1158

 Score =  172 bits (435), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 87/151 (57%), Positives = 110/151 (72%), Gaps = 3/151 (1%)

Query: 2    DNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECSAAPTRLSIQLMRYGHDK 61
            D KLLQL+ YE  RKPG+F D+VYHENAR LL D+NIYRIE S+A TRL IQLM   +D+
Sbjct: 967  DTKLLQLYAYENYRKPGRFFDIVYHENARALLHDQNIYRIEYSSAQTRLGIQLMNSWNDQ 1026

Query: 62   PEVAAVTMDPNFSAYLHNDFLSVVPDKKEKSGIFLKRNKRKYASIDDEH--SSQVMDGLQ 119
            PEV AVT++P F+ YL NDFLS V D +EK G+FLKRNK K +   +E    S+ ++GL 
Sbjct: 1027 PEVTAVTVEPGFANYLQNDFLSFVSD-EEKPGLFLKRNKAKLSGPGEESLGMSRALEGLN 1085

Query: 120  VINGLECKIACNSSKVSYVLDTEDFLFRTRR 150
            +IN +ECKIAC+S KV Y   T D L+R ++
Sbjct: 1086 IINEVECKIACSSFKVKYEPHTADLLYRRKQ 1116


>AT3G01320.2 | Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197
            FORWARD LENGTH=1360
          Length = 1360

 Score =  162 bits (411), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 79/148 (53%), Positives = 109/148 (73%), Gaps = 6/148 (4%)

Query: 1    MDNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECSAAPTRLSIQLMRYGHD 60
            MDNKLLQL+ YE+SRKPG+ +D VY+EN RVL+ +ENIYR+ECS+ P+RLSIQLM    +
Sbjct: 1191 MDNKLLQLYEYEKSRKPGRVIDSVYYENVRVLVHEENIYRLECSSLPSRLSIQLMDNIIE 1250

Query: 61   KPEVAAVTMDPNFSAYLHNDFLSVVPDKKEKS-GIFLKRNKRKYASIDDEHSSQVMDGLQ 119
            KPE  AV+MDP F++Y+  + LSV   KKE+   I L+RN      +      + M+G++
Sbjct: 1251 KPEAYAVSMDPTFASYMQTELLSVSSGKKEEGHDIVLQRNLTGLYDL-----CKAMEGVE 1305

Query: 120  VINGLECKIACNSSKVSYVLDTEDFLFR 147
            V+NGLECK++C+S K++YVLDTED+  R
Sbjct: 1306 VVNGLECKMSCSSYKIAYVLDTEDYFHR 1333


>AT3G01320.1 | Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197
            FORWARD LENGTH=1372
          Length = 1372

 Score =  162 bits (411), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 79/148 (53%), Positives = 109/148 (73%), Gaps = 6/148 (4%)

Query: 1    MDNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECSAAPTRLSIQLMRYGHD 60
            MDNKLLQL+ YE+SRKPG+ +D VY+EN RVL+ +ENIYR+ECS+ P+RLSIQLM    +
Sbjct: 1203 MDNKLLQLYEYEKSRKPGRVIDSVYYENVRVLVHEENIYRLECSSLPSRLSIQLMDNIIE 1262

Query: 61   KPEVAAVTMDPNFSAYLHNDFLSVVPDKKEKS-GIFLKRNKRKYASIDDEHSSQVMDGLQ 119
            KPE  AV+MDP F++Y+  + LSV   KKE+   I L+RN      +      + M+G++
Sbjct: 1263 KPEAYAVSMDPTFASYMQTELLSVSSGKKEEGHDIVLQRNLTGLYDL-----CKAMEGVE 1317

Query: 120  VINGLECKIACNSSKVSYVLDTEDFLFR 147
            V+NGLECK++C+S K++YVLDTED+  R
Sbjct: 1318 VVNGLECKMSCSSYKIAYVLDTEDYFHR 1345


>AT1G10450.1 | Symbols: SNL6 | SIN3-like 6 | chr1:3432313-3437979
            FORWARD LENGTH=1122
          Length = 1122

 Score =  155 bits (393), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 80/150 (53%), Positives = 104/150 (69%), Gaps = 2/150 (1%)

Query: 2    DNKLLQLFTYEQSRKPGKFVDLVYHENARVLLPDENIYRIECSAAPTRLSIQLMRYGHDK 61
            D KLLQL  YE  RKPGKF DLVYHENA  LL + NIYRI  S+  TRLSIQLM  G+++
Sbjct: 942  DTKLLQLHAYENYRKPGKFFDLVYHENACALLHEANIYRIRYSSEGTRLSIQLMNSGNNQ 1001

Query: 62   PEVAAVTMDPNFSAYLHNDFLSVVPDKKEKSGIFLKRNKRKYASIDDEHSSQV-MDGLQV 120
             EV  V M+P F+ YL N  L  V D +E  G+FL RNK+K+ S+D+     V M+ L +
Sbjct: 1002 LEVMGVAMEPAFADYLQNKCLKSVND-EENHGLFLNRNKKKFTSLDESRGMPVAMERLNI 1060

Query: 121  INGLECKIACNSSKVSYVLDTEDFLFRTRR 150
            IN +EC++AC+SSKV YV +T D L+R+++
Sbjct: 1061 INEMECRMACSSSKVKYVANTSDLLYRSKQ 1090