Miyakogusa Predicted Gene

Lj0g3v0228129.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0228129.1 Non Chatacterized Hit- tr|B9G849|B9G849_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,35.71,5e-19,Cellulose_synt,Cellulose synthase; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.14879.1
         (147 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32540.1 | Symbols: ATCSLB04, CSLB04, ATCSLB4 | cellulose syn...    61   2e-10
AT2G32530.1 | Symbols: ATCSLB03, CSLB03, ATCSLB3 | cellulose syn...    61   3e-10
AT2G32610.1 | Symbols: ATCSLB01, CSLB01, ATCSLB1 | cellulose syn...    55   1e-08
AT2G32620.1 | Symbols: ATCSLB02, CSLB02, ATCSLB2 | cellulose syn...    51   4e-07
AT4G15290.1 | Symbols: ATCSLB05, CSLB05, ATCSLB5 | Cellulose syn...    46   8e-06

>AT2G32540.1 | Symbols: ATCSLB04, CSLB04, ATCSLB4 | cellulose
           synthase-like B4 | chr2:13814686-13818289 FORWARD
           LENGTH=755
          Length = 755

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 15/146 (10%)

Query: 4   MRTSTSWFIGFFSGMLNIAGISDAVFEITQK-----------ETSTSXXXXXXXXXXRFT 52
           ++T+ SW       +L + GIS  VF +T+K           + S            +F 
Sbjct: 608 IKTTCSWLFSVLDVILKLLGISKTVFIVTKKTMPETKSGSGSKKSQREVDCPNQDSGKFE 667

Query: 53  FDESPVFVAGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXX 112
           FD S  F+ GT  +LV LAAL    +GL  +G    G   G+ E    + +++ + P   
Sbjct: 668 FDGSLYFLPGTFIVLVNLAALAGCLVGLQSRG----GGGSGLAEACGCILVVILFLPFLK 723

Query: 113 XXXXXXXYGIPFSTICKSAALAFAFV 138
                  YGIPFST+ K+A LA  FV
Sbjct: 724 GMFEKGKYGIPFSTLSKAAFLAALFV 749


>AT2G32530.1 | Symbols: ATCSLB03, CSLB03, ATCSLB3 | cellulose
           synthase-like B3 | chr2:13809283-13813487 FORWARD
           LENGTH=755
          Length = 755

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 15/148 (10%)

Query: 4   MRTSTSWFIGFFSGMLNIAGISDAVFEITQK-----------ETSTSXXXXXXXXXXRFT 52
           ++T+ SW       +L + GIS  VF +T+K           E S            +F 
Sbjct: 608 IKTTCSWLFSIPDIILKLLGISKTVFIVTKKTMPKTMSGSGSEKSQREVDCPNQDSGKFE 667

Query: 53  FDESPVFVAGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXX 112
           FD S  F+ GT  LLV LAAL    +GL      H G   G+ E    + +++ + P   
Sbjct: 668 FDGSLYFLPGTFILLVNLAALAGCSVGLQ----RHRGGGSGLAEACGCILVVILFLPFLK 723

Query: 113 XXXXXXXYGIPFSTICKSAALAFAFVHF 140
                  YGIP+ST+ K+A LA  FV F
Sbjct: 724 GMFEKGKYGIPWSTLSKAAFLAVLFVVF 751


>AT2G32610.1 | Symbols: ATCSLB01, CSLB01, ATCSLB1 | cellulose
           synthase-like B1 | chr2:13836234-13839513 FORWARD
           LENGTH=757
          Length = 757

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 11/145 (7%)

Query: 7   STSWFIGFFSGMLNIAGISDAVFEITQKET-----------STSXXXXXXXXXXRFTFDE 55
           ++SW    F   L + GIS+ VF IT+K             S            +F FD 
Sbjct: 611 TSSWLFSIFDITLKLLGISETVFIITKKTVAGTKSALGSGPSQGEDVGPNSDLFKFEFDG 670

Query: 56  SPVFVAGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXX 115
           S  F+ GT  +LV +AAL +  +GL     +H G   G+ E    + +++ + P      
Sbjct: 671 SLCFLPGTFIVLVNIAALAVFSVGLQRSSYSHEGGGSGLAEACGCVLVMMLFLPFLMGLF 730

Query: 116 XXXXYGIPFSTICKSAALAFAFVHF 140
               YG P ST+  +  LA  FV F
Sbjct: 731 KKGKYGTPLSTLSIAGFLAVLFVVF 755


>AT2G32620.1 | Symbols: ATCSLB02, CSLB02, ATCSLB2 | cellulose
           synthase-like B | chr2:13840744-13844324 FORWARD
           LENGTH=757
          Length = 757

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 10/144 (6%)

Query: 7   STSWFIGFFSGMLNIAGISDAVFEITQK----ETST------SXXXXXXXXXXRFTFDES 56
           ++SW    F  +L + G+S  VF +++K    ET +      S          +  FD S
Sbjct: 610 TSSWLFSIFDIILKLLGLSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGS 669

Query: 57  PVFVAGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXXX 116
             F+ GT  +LV LAAL+  F+GL     +H G   G+GE  + + +++ ++P       
Sbjct: 670 LYFLPGTFIVLVNLAALVGVFVGLQRSSYSHGGGGSGLGEACACILVVMLFFPFLKGLFA 729

Query: 117 XXXYGIPFSTICKSAALAFAFVHF 140
              YGIP ST+ K+  LA +FV F
Sbjct: 730 KGKYGIPLSTLSKAGFLAVSFVVF 753


>AT4G15290.1 | Symbols: ATCSLB05, CSLB05, ATCSLB5 | Cellulose
           synthase family protein | chr4:8721693-8726599 REVERSE
           LENGTH=757
          Length = 757

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 11/146 (7%)

Query: 7   STSWFIGFFSGMLNIAGISDAVFEITQK-----------ETSTSXXXXXXXXXXRFTFDE 55
           ++SW       +L + GIS   F I +K           + S            +F FD 
Sbjct: 609 TSSWLFSIQDIILKLLGISQIGFVIAKKTIPETKSVYESKPSQGEDDVPKLNLGKFEFDS 668

Query: 56  SPVFVAGTTFLLVQLAALIIKFLGLNPKGPAHSGNECGMGEFISSLYLIVCYWPXXXXXX 115
           S +F+ GT  +LV LAAL    + L     +H G   G+ E    + +++ + P      
Sbjct: 669 SGLFIPGTFIMLVNLAALAGYLVRLQRSSCSHGGGGSGLAEACGCILVVMLFLPFLKGLF 728

Query: 116 XXXXYGIPFSTICKSAALAFAFVHFC 141
               Y IP ST+ K+A L   FV FC
Sbjct: 729 EHGKYSIPLSTLSKAAFLTVLFVFFC 754