Miyakogusa Predicted Gene
- Lj0g3v0227659.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0227659.1 Non Chatacterized Hit- tr|A5B3Q6|A5B3Q6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.28,7e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR_2,Pentatricopeptide repeat; PPR_1,Pentatricopep,CUFF.14841.1
(285 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 189 1e-48
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 100 9e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 4e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 4e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 7e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 5e-18
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 4e-17
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 4e-17
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 83 2e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 4e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 8e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 81 9e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 80 2e-15
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 78 6e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 7e-15
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 7e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-14
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 4e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 9e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 2e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 2e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 2e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 4e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 7e-13
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 7e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 70 1e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 1e-12
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 70 2e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 69 4e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 8e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 2e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 66 3e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 8e-11
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 8e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 9e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 62 4e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 62 4e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 1e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 57 2e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 54 9e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 53 2e-07
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 53 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 4e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 8e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 50 1e-06
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 50 2e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 6e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 48 8e-06
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 9e-06
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 9e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-05
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 174/321 (54%), Gaps = 44/321 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPD---------------FVTE-------- 40
Y +L+ C G ++A DQM +G P+ ++ E
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 41 ----FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
FSPS+VT NALI+G G+ E+A+ +L M E GL PD VS++ V+SGF R ++
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPL------------SGDVYWSLMGKQGGLLDEVNYTS 144
+A +K EM E + + L + D+Y ++ + G DE YT+
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML-RVGLPPDEFTYTA 525
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHL 204
LINAYC +G++ KA L +E+ G + V Y VLI+GL+K++RT+EAK++LL L Y
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE- 584
Query: 205 CTSSWPT-LTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAV 263
S P+ +T+ TLIENCSN EF S+V L+KGF ++ + EA V +ML N KPDG
Sbjct: 585 --ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 264 YNFLIVEHCRCDNGDKAYDMY 284
YN +I HCR + KAY +Y
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLY 663
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 109/272 (40%), Gaps = 51/272 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y L+ +C G A + D+M KG LP+ +VT N LI G +
Sbjct: 205 VFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPN--------VVTYNTLIDGYCKLRKI 256
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++ ++LR M GL P+ +S+ V++G R G +++ + EM+
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN-------------- 302
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
++G LDEV Y +LI YC +G +A + E+ G + Y LI
Sbjct: 303 ----------RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Query: 182 SGLDKKARTQEAKKMLLSL-VYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
+ K A + L + V LC + T+ TL++ GF +
Sbjct: 353 HSMCKAGNMNRAMEFLDQMRVRGLCPNER---TYTTLVD---------------GFSQKG 394
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
NEA VL M P YN LI HC
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+ YC +G+ KA +H++M+ KG LPD +VT + LI+GL R
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD--------VVTYSVLINGLNKQSRTR 572
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSG-----FFRIGELRKAYDLKLEMDEMMQSNNMLA 117
EA +L + P V++ ++ F + L K + +K M E Q
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ------ 626
Query: 118 IQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIY 177
V+ S++GK D Y +I+ +C G++ KA TL E+ G + +V
Sbjct: 627 -------VFESMLGKNHK-PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 178 DVLISGLDKKARTQEAKKMLLSLVYHLCTS 207
L+ L K+ + E L S++ H+ S
Sbjct: 679 IALVKALHKEGKVNE----LNSVIVHVLRS 704
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 49/281 (17%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y +++ C GE +A + DQMI + + SP+ VT N LI L + E
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITR--------DCSPNTVTYNTLISTLCKENQVE 382
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA E+ R + G+ PD +F +++ G L + + + +E+ E M+S
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLC----LTRNHRVAMELFEEMRS---------- 428
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+G DE Y LI++ C+ G++ +A +L ++ G R + Y+ LI
Sbjct: 429 ----------KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
G K +T+EA+++ + H S ++T++TLI+ L K R+ D
Sbjct: 479 GFCKANKTREAEEIFDEMEVH--GVSRNSVTYNTLIDG-----------LCKSRRVED-- 523
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
AA +++ M+ KPD YN L+ CR + KA D+
Sbjct: 524 --AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 115/275 (41%), Gaps = 34/275 (12%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P + T N LI L + A+ +L MP GL PD +FT V+ G+ G+L A
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 101 DLKLEMDEMMQSNNMLAIQPL------SGDVYWSL-----MGKQGGLL-DEVNYTSLINA 148
++ +M E S + +++ + G V +L M Q G D+ + +L+N
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
C G V A ++D + G Y+ +ISGL K +EA ++L ++ C+ +
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 209 WPTLTFDTLIEN-CSNNEFTSLVE-------------------LVKGFRIRDLENEAASV 248
T+T++TLI C N+ E L++G + A +
Sbjct: 365 --TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 249 LNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
M +PD YN LI C D+A +M
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 125/312 (40%), Gaps = 56/312 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS--------------------- 42
Y L+ C + + +A + + KG LPD T S
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 43 ------PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P T N LI L G+ +EAL +L+ M G +++ ++ GF + +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWS--------LMGK---QGGLLDEVNYTSL 145
R+A ++ EM+ S N + L + S LM + +G D+ Y SL
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
+ +C G++ KA ++ +T G V Y LISGL K R + A K+L S+
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 206 TSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYN 265
N + + + +++ + FR R EA ++ ML N+ P AV +
Sbjct: 607 --------------NLTPHAYNPVIQGL--FRKRK-TTEAINLFREMLEQNEAPPDAV-S 648
Query: 266 FLIVEHCRCDNG 277
+ IV C+ G
Sbjct: 649 YRIVFRGLCNGG 660
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ + L+ YC G AF +H+ MI G SP++VT LI GL G
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGC--------SPNVVTYTTLIDGLCKEGDL 472
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+ A E+L M ++GL P+ ++ ++V+G + G + +A L E +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA------------- 519
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
G D V YT+L++AYC GE+ KA+ +L E+ G V ++VL+
Sbjct: 520 -----------AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
+G ++ +K+L +W L + + N T+ LVK + IR+
Sbjct: 569 NGFCLHGMLEDGEKLL----------NW------MLAKGIAPNA-TTFNSLVKQYCIRNN 611
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
A ++ M PDG Y L+ HC+ N +A+ ++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 136/330 (41%), Gaps = 73/330 (22%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------- 39
+Y Y +++G C + ++A +MI +G LPD V
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 40 -----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
+ +P ++T A+I G G EA ++ M GL PD+V+FT +++G+ + G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
++ A+ + M + S N+ V YT+LI+ C +G+
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNV------------------------VTYTTLIDGLCKEGD 471
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
+ A LL E+ G Y+ +++GL K +EA K++ + + T+T+
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE--FEAAGLNADTVTY 529
Query: 215 DTLIEN-CSNNEFTSLVELVK-------------------GFRIRDLENEAASVLNTMLH 254
TL++ C + E E++K GF + + + +LN ML
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 255 WNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
P+ +N L+ ++C +N A +Y
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 38/251 (15%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
N +IH + GR +EA +L M G PD +S++ VV+G+ R GEL K + L E
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI----E 305
Query: 109 MMQSNNMLAIQPLSGDVY---------------WSLMGKQGGLLDEVNYTSLINAYCADG 153
+M+ + + G + +S M +QG L D V YT+LI+ +C G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 154 EVVKAKTLLDELTHFGDVRQSVI-YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL 212
++ A E+ H D+ V+ Y +ISG + EA K+ + C P
Sbjct: 366 DIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM---FCKGLEP-- 419
Query: 213 TFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+ + EL+ G+ +A V N M+ P+ Y LI C
Sbjct: 420 ------------DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 273 RCDNGDKAYDM 283
+ + D A ++
Sbjct: 468 KEGDLDSANEL 478
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y LM YC GE KA + +M+ KG P++VT N L++G G E+
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGL--------QPTIVTFNVLMNGFCLHGMLED 579
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
++L M G+ P+ +F ++V K Y ++ NN+ A +
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLV----------KQYCIR---------NNLKAATAIYK 620
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D M +G D Y +L+ +C + +A L E+ G Y VLI G
Sbjct: 621 D-----MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 184 LDKKARTQEAKKML 197
K+ + EA+++
Sbjct: 676 FLKRKKFLEAREVF 689
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ + L+ YC G AF +H+ MI G SP++VT LI GL G
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGC--------SPNVVTYTTLIDGLCKEGDL 472
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+ A E+L M ++GL P+ ++ ++V+G + G + +A L E +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA------------- 519
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
G D V YT+L++AYC GE+ KA+ +L E+ G V ++VL+
Sbjct: 520 -----------AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
+G ++ +K+L +W L + + N T+ LVK + IR+
Sbjct: 569 NGFCLHGMLEDGEKLL----------NW------MLAKGIAPNA-TTFNSLVKQYCIRNN 611
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
A ++ M PDG Y L+ HC+ N +A+ ++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 136/330 (41%), Gaps = 73/330 (22%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------- 39
+Y Y +++G C + ++A +MI +G LPD V
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 40 -----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
+ +P ++T A+I G G EA ++ M GL PD+V+FT +++G+ + G
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
++ A+ + M + S N+ V YT+LI+ C +G+
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNV------------------------VTYTTLIDGLCKEGD 471
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
+ A LL E+ G Y+ +++GL K +EA K++ + + T+T+
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE--FEAAGLNADTVTY 529
Query: 215 DTLIEN-CSNNEFTSLVELVK-------------------GFRIRDLENEAASVLNTMLH 254
TL++ C + E E++K GF + + + +LN ML
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 255 WNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
P+ +N L+ ++C +N A +Y
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 38/251 (15%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
N +IH + GR +EA +L M G PD +S++ VV+G+ R GEL K + L E
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI----E 305
Query: 109 MMQSNNMLAIQPLSGDVY---------------WSLMGKQGGLLDEVNYTSLINAYCADG 153
+M+ + + G + +S M +QG L D V YT+LI+ +C G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 154 EVVKAKTLLDELTHFGDVRQSVI-YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL 212
++ A E+ H D+ V+ Y +ISG + EA K+ + C P
Sbjct: 366 DIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM---FCKGLEP-- 419
Query: 213 TFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+ + EL+ G+ +A V N M+ P+ Y LI C
Sbjct: 420 ------------DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 273 RCDNGDKAYDM 283
+ + D A ++
Sbjct: 468 KEGDLDSANEL 478
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 32/194 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y LM YC GE KA + +M+ KG P++VT N L++G G E+
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGL--------QPTIVTFNVLMNGFCLHGMLED 579
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
++L M G+ P+ +F ++V K Y ++ NN+ A +
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLV----------KQYCIR---------NNLKAATAIYK 620
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D M +G D Y +L+ +C + +A L E+ G Y VLI G
Sbjct: 621 D-----MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 184 LDKKARTQEAKKML 197
K+ + EA+++
Sbjct: 676 FLKRKKFLEAREVF 689
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 143/302 (47%), Gaps = 42/302 (13%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+ C + +F KA + QM+ KG +P+ ++T NALI+G G E
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN--------VITYNALINGYCKRGMIE 410
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFR------IGELRKAYDLKLEMDEMMQSNNML 116
+A++++ M L P+T ++ ++ G+ + +G L K + K+ + +++ N+++
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKV-LPDVVTYNSLI 469
Query: 117 AIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
Q SG+ SLM +G + D+ YTS+I++ C V +A L D L G
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEF--TS 228
V+Y LI G K + EA ML ++ C + +LTF+ LI C++ + +
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN--SLTFNALIHGLCADGKLKEAT 587
Query: 229 LVE--LVK-GFR-------------IRDLE-NEAASVLNTMLHWNDKPDGAVYNFLIVEH 271
L+E +VK G + ++D + + A S ML KPD Y I +
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 272 CR 273
CR
Sbjct: 648 CR 649
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 50/281 (17%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +L+ YC + + AF + ++M KG + V LIHGL R +
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY--------THLIHGLCVARRID 305
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA+++ M + FP ++T ++ +A +L EM+E I+P
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET-------GIKP-- 356
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+++ YT LI++ C+ + KA+ LL ++ G + + Y+ LI+
Sbjct: 357 -NIH--------------TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
G K+ ++A V L S L+ +T N EL+KG+ ++
Sbjct: 402 GYCKRGMIEDAVD-----VVELMESR--KLSPNTRTYN----------ELIKGYCKSNV- 443
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
++A VLN ML PD YN LI CR N D AY +
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 111/284 (39%), Gaps = 37/284 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C S+A ++ +M G P++ T LI L + E+
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGI--------KPNIHTYTVLIDSLCSQCKFEK 376
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A E+L M E GL P+ +++ A+++G+ + G + A D+ M+ S N L
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 124 DVYWSLMGKQGGLL----------DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
S + K G+L D V Y SLI+ C G A LL + G V
Sbjct: 437 GYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELV 233
Y +I L K R +EA + FD+L + N L+
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDL-----------------FDSLEQKGVNPNVVMYTALI 539
Query: 234 KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG 277
G+ +EA +L ML N P+ +N LI H C +G
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI--HGLCADG 581
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 111/283 (39%), Gaps = 38/283 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ YC G+ +A M ++M+ K LP+ +T NALIHGL G+ +EA
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT--------FNALIHGLCADGKLKEA 586
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ M ++GL P + T ++ + G+ AY +M+ S
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS---RFQQMLSS------------ 631
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
G D YT+ I YC +G ++ A+ ++ ++ G Y LI G
Sbjct: 632 ---------GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTL--TFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
+T A +L + C S T L+E + S EL + + +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDN---GDKAYD 282
+L M+ + P+ Y LI+ C N +K +D
Sbjct: 743 T-VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 53/237 (22%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P++ T N +++G G EEA + + + E GL PD ++T+++ G+ + +L A+ +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
EM PL +G +EV YT LI+ C + +A L
Sbjct: 276 FNEM-------------PL-----------KGCRRNEVAYTHLIHGLCVARRIDEAMDLF 311
Query: 163 DELTH---FGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC-TSSWPTL-TFDTL 217
++ F VR Y VLI L R EA L+LV + T P + T+ L
Sbjct: 312 VKMKDDECFPTVR---TYTVLIKSLCGSERKSEA----LNLVKEMEETGIKPNIHTYTVL 364
Query: 218 IEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
I++ CS +F +A +L ML P+ YN LI +C+
Sbjct: 365 IDSLCSQCKF----------------EKARELLGQMLEKGLMPNVITYNALINGYCK 405
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 126/276 (45%), Gaps = 24/276 (8%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y+Y L+ +C G+ +A+++ ++M G P+ V N LI R
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGL--------KPNTVGFNCLISAFCKEHRI 475
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA+EI R MP G PD +F +++SG + E++ A L +M N + L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 122 ------SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
G++ + M QG LDE+ Y SLI C GEV KA++L +++ G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSL 229
++ ++LI+GL + +EA + +V L S+ +TF++LI C
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMV--LRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYN 265
+ + + + + + + NT++ W K G VY+
Sbjct: 654 LTMFRKLQAEGIPPDTVT-FNTLMSWLCK-GGFVYD 687
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 37/288 (12%)
Query: 31 KGFLPDFVTEFS--PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVS 88
K L D VT + P + T N+LI+G G ALE+L M G P+ S+T +V
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 89 GFFRIGELRKAYDLKLEMDEMMQSNNMLAIQ------------PLSGDVYWSLMGKQGGL 136
GF ++G++ +AY++ EM N + P + +++ M ++G
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE-MPRKGCK 491
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
D + SLI+ C E+ A LL ++ G V +V Y+ LI+ ++ +EA+K+
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 197 LLSLVYHLCTSSWPTLTFDTLIEN-CSNNEF---TSLVE----------------LVKGF 236
+ +V+ S +T+++LI+ C E SL E L+ G
Sbjct: 552 VNEMVFQ--GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ EA M+ PD +N LI CR + M+
Sbjct: 610 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 106/276 (38%), Gaps = 52/276 (18%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
+M +C E A + M G +P+ V LIH L R EAL++
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY--------QTLIHSLSKCNRVNEALQL 274
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
L M MG PD +F V+ G + + +A + N ML
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM---------VNRMLI---------- 315
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
+G D++ Y L+N C G V AK L + + VI++ LI G
Sbjct: 316 -----RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTH 366
Query: 188 ARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAAS 247
R +AK +L +V ++ + + C+ N L+ G+ L A
Sbjct: 367 GRLDDAKAVLSDMV----------TSYGIVPDVCTYN------SLIYGYWKEGLVGLALE 410
Query: 248 VLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
VL+ M + KP+ Y L+ C+ D+AY++
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 28/222 (12%)
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ I+R + G T + + K+Y++ LE+ + S N ++ +
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI---LVSGN---CHKVAAN 203
Query: 125 VYWSLMGKQGGLLDEVNYT--SLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
V++ ++ ++ + +T ++ A+CA E+ A +LL ++T G V SVIY LI
Sbjct: 204 VFYDMLSRK---IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
L K R EA ++L + C T +++ G D
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFN-----------------DVILGLCKFDRI 303
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
NEAA ++N ML PD Y +L+ C+ D A D++
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 44/298 (14%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
GE + F + M++ G +PD ++ C LI G G+ +A +IL + G
Sbjct: 116 GELEEGFKFLENMVYHGNVPD--------IIPCTTLIRGFCRLGKTRKAAKILEILEGSG 167
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------SGDVYWSL 129
PD +++ ++SG+ + GE+ A + +D M S +++ + SG + ++
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 130 -----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
M ++ D + YT LI A C D V A LLDE+ G V Y+VL++G+
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELV-----KGFRI 238
K+ R EA K L + C + +T + ++ + CS + +L+ KGF
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPN--VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 239 --------------RDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYD 282
+ L A +L M +P+ YN L+ C+ D+A +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 49/270 (18%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C G + A + M+ KGF SPS+VT N LI+ L G A++IL MP
Sbjct: 320 CSTGRWMDAEKLLADMLRKGF--------SPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
+ G P+++S+ ++ GF + ++ +A + Y M
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIE------------------------YLERMVS 407
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
+G D V Y +++ A C DG+V A +L++L+ G + Y+ +I GL K +T +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 193 AKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTM 252
A K+L + L DT+ + LV G +EA +
Sbjct: 468 AIKLLDEM-------RAKDLKPDTI----------TYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 253 LHWNDKPDGAVYNFLIVEHCRCDNGDKAYD 282
+P+ +N +++ C+ D+A D
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 49/253 (19%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ +Y L+ +C + + +A ++M+ +G PD +VT N ++ L G+
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD--------IVTYNTMLTALCKDGKV 430
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
E+A+EIL + G P +++ V+ G + G+ KA L +DEM + ++P
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL---LDEMRAKD----LKP- 482
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
D + Y+SL+ +G+V +A E G +V ++ ++
Sbjct: 483 ----------------DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
GL K +T A L+ ++ C NE TS L++G +
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINR----------------GCKPNE-TSYTILIEGLAYEGM 569
Query: 242 ENEAASVLNTMLH 254
EA +LN + +
Sbjct: 570 AKEALELLNELCN 582
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 31/281 (11%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C G + A + DQM + G PD V S L++GL GR +A
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS--------LVNGLCNSGRWRDA 231
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL--- 121
+LRGM + + PD ++F A++ F + G+ A +L EM M + N+ L
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 122 --------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
+ LM +G D V YTSLIN +C +V A + E++ G
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP--TLTFDTLIEN-CSNNEFTSLV 230
++ Y LI G + + A+++ H+ + P T++ L+ C N + +
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVF----SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 231 ELVKGFRIRDLENEAASV--LNTMLH---WNDKPDGAVYNF 266
+ + + R+++ A ++ N +LH +N K + A+ F
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 121/316 (38%), Gaps = 73/316 (23%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
LM +C + A +M+ GF PD +VT +LI+G R EEA+ +
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPD--------IVTFTSLINGFCLGNRMEEAMSM 164
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM--------------------- 106
+ M EMG+ PD V +T ++ + G + A L +M
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 107 -------DEMMQSNNMLAIQP--LSGDVYWSLMGKQGGLLDE----------------VN 141
D +++ I+P ++ + K+G LD
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 142 YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
YTSLIN +C +G V +A+ + + G V Y LI+G K + +A K+ +
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 202 YHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDG 261
T + T+T+ TLI+ GF N A V + M+ P+
Sbjct: 345 QKGLTGN--TITYTTLIQ---------------GFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 262 AVYNFLIVEHCRCDNG 277
YN L+ HC C NG
Sbjct: 388 RTYNVLL--HCLCYNG 401
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 134/311 (43%), Gaps = 47/311 (15%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y L+ YC G+ A + +M+ LP+ TCN L+H L GR
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN--------AYTCNILLHSLWKMGRI 447
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA E+LR M E G DTV+ +V G GEL KA +E+ + M+ + A+ L
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA----IEIVKGMRVHGSAALGNL 503
Query: 122 SGDVYWSLMG----KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIY 177
G+ Y L+ + L D + Y++L+N C G +AK L E+ SV Y
Sbjct: 504 -GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 178 DVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT---LTFDTLIEN-------------- 220
++ I K+ + A ++L + C S T L I+N
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Query: 221 -------CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
C+ N T++ L +G ++ D A ++L+ M+ N P+ + +LI C+
Sbjct: 623 KGISPNICTYN--TAIQYLCEGEKVED----ATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Query: 274 CDNGDKAYDMY 284
+ D A +++
Sbjct: 677 VPDFDMAQEVF 687
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 34/249 (13%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
SL + N + GL G+ EA +L+ M + G+ P S+ ++ G ++G L A +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI- 383
Query: 104 LEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLD 163
LM + G D V Y L++ YC+ G+V AK+LL
Sbjct: 384 -----------------------VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420
Query: 164 ELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CS 222
E+ + + ++L+ L K R EA+++L + T+T + +++ C
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK--GYGLDTVTCNIIVDGLCG 478
Query: 223 NNEFTSLVELVKGFRIR------DLENEAASVL-NTMLHWNDKPDGAVYNFLIVEHCRCD 275
+ E +E+VKG R+ +L N ++ ++++ N PD Y+ L+ C+
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 276 NGDKAYDMY 284
+A +++
Sbjct: 539 RFAEAKNLF 547
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
G+F +A + QM KG PS+ + N L+ GL G +A I+ M G
Sbjct: 340 GKFIEAETVLKQMTDKGI--------GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG 135
+ PD V++ ++ G+ +G++ A L + EMM++N
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSL---LQEMMRNN---------------------C 427
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
L + L+++ G + +A+ LL ++ G +V ++++ GL +A +
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 196 MLLSLVYHLCTS------SWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVL 249
++ + H + S+ L D+LIEN + + L+ G EA ++
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 250 NTMLHWNDKPDGAVYNFLIVEHCR 273
M+ +PD YN I C+
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCK 571
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L+ CD A + D+M KG P+ EF T L+ G G
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPN---EF-----TFGILVRGYCKAGLT 198
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++ LE+L M G+ P+ V + +VS F R G D +M E M+
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGR----NDDSEKMVEKMR---------- 244
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL---THFGDVR-QSVIY 177
++G + D V + S I+A C +G+V+ A + ++ + G R S+ Y
Sbjct: 245 ----------EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 178 DVLISGLDKKARTQEAKKMLLSL 200
++++ G K ++AK + S+
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESI 317
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 46/248 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y L+ YC G+ KAF +HD+M+ G P T+F T +LI+ L +
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP---TQF-----TYTSLIYVLCRKNKT 448
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA E+ + G+ PD V ++ G IG + +A+ L EMD M++I P
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD-------MMSINP- 500
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
D+V Y L+ C +G+ +A+ L+ E+ G + Y+ LI
Sbjct: 501 ----------------DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 182 SGLDKKARTQEA---KKMLLSLVYHLCTSSWPT-LTFDTLIENCSNNEFTSLVELVKGFR 237
SG KK T+ A + +LSL ++ PT LT++ L++ S N+ L E +
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFN------PTLLTYNALLKGLSKNQEGELAEEL---- 594
Query: 238 IRDLENEA 245
+R++++E
Sbjct: 595 LREMKSEG 602
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLV-TCNALIHGLGFFGRAE 62
Y L+ + +G A + +M KGF PD T ++P L CN GRA
Sbjct: 262 TYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQT-YNPILSWMCNE--------GRAS 312
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
E +LR M E+GL PD+VS+ ++ G G+L A+ + EM + L
Sbjct: 313 E---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Query: 122 ----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ ++ + ++G +LD V Y LIN YC G+ KA L DE+ G
Sbjct: 370 HGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQ 429
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
Y LI L +K +T+EA ++ +V
Sbjct: 430 PTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ Y KG+ AF + D+M+ GF +P+L+T NAL+ GL E
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEMLSLGF--------NPTLLTYNALLKGLSKNQEGEL 590
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGF 90
A E+LR M G+ P+ SF +V+
Sbjct: 591 AEELLREMKSEGIVPNDSSFCSVIEAM 617
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 44/293 (15%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ +C S A + DQM+ G+ PD VT LIHGL +A EA+
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPD--------TVTFTTLIHGLFLHNKASEAVA 204
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY 126
++ M + G PD V++ AVV+G + G+ DL L + M++ + A + V
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDT----DLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 127 WSL---------------MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
SL M +G + + Y+SLI+ C G A LL ++
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
V + LI KK + +A+K+ ++ +I+ + +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKL-----------------YEEMIKRSIDPNIFTYSS 363
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
L+ GF + D EA +L M+ + P+ YN LI C+ DK +++
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 44/284 (15%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C A ++ +M +KG P+ +T SL++C L +GR +A
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT--YSSLISC------LCNYGRWSDA 307
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL--- 121
+L M E + P+ V+F+A++ F + G+L KA L EM + N+ L
Sbjct: 308 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLING 367
Query: 122 --------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
LM ++ L + V Y +LIN +C V K L E++ G V
Sbjct: 368 FCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGN 427
Query: 174 SVIYDVLISGLDKKARTQEAK---KMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSL 229
+V Y LI G + A+ K ++S+ H LT++ L++ C N +
Sbjct: 428 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH-----PNILTYNILLDGLCKNGKLA-- 480
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+A V + +PD YN +I C+
Sbjct: 481 --------------KAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 32/187 (17%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +L+ +C +A M + MI K LP+ +VT N LI+G R +
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN--------VVTYNTLINGFCKAKRVD 410
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+ +E+ R M + GL +TV++T ++ GFF+ + A M+ Q +S
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA--------------QMVFKQMVS 456
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
V+ +++ Y L++ C +G++ KA + + L Y+++I
Sbjct: 457 VGVHPNIL----------TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 506
Query: 183 GLDKKAR 189
G+ K +
Sbjct: 507 GMCKAGK 513
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 50/296 (16%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ YC S+A + DQM FV E+ P+ VT N LIHGL +A EA+
Sbjct: 155 SLLNGYCHGKRISEAVALVDQM--------FVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY 126
++ M G PD ++ VV+G + G++ DL L + + M+ + A
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDI----DLALSLLKKMEKGKIEA--------- 253
Query: 127 WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDK 186
D V YT++I+A C V A L E+ + G V Y+ LI L
Sbjct: 254 -----------DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 187 KARTQEAKKMLLSLVYHLCTSSWPTLT------------------FDTLIENCSNNEFTS 228
R +A ++L ++ + T + +D +I+ + + +
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
L+ GF + D +EA + M+ + P+ YN LI C+ ++ +++
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 125/300 (41%), Gaps = 54/300 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C+ + A ++ +M +KG P+ +VT N+LI L +GR +A
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPN--------VVTYNSLIRCLCNYGRWSDA 309
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+L M E + P+ V+F+A++ F + G+L +A L DEM++ +I P
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL---YDEMIKR----SIDP---- 358
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
D Y+SLIN +C + +AK + + + V Y+ LI G
Sbjct: 359 -------------DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE------NC--SNNEFTSLVE----- 231
K R +E ++ + + T+T++TLI+ +C + F +V
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGN--TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 232 -------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
L+ G +A V + +PD YN +I C+ + +D++
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 122/284 (42%), Gaps = 38/284 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ + +G+ +A ++D+MI + PD + T ++LI+G R +EA +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHM 382
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA----IQPL-- 121
M FP+ V++ ++ GF + + + +L EM + N + IQ L
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 122 SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
+GD + M G D + Y+ L++ C G++ KA + + L
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
Y+++I G+ K + ++ + C+ S + + +I +T+++ GF
Sbjct: 503 YNIMIEGMCKAGKVEDGWDL-------FCSLSLKGVKPNVII-------YTTMIS---GF 545
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ L+ EA ++ M P+ YN LI R +GDKA
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLI--RARLRDGDKA 587
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 42/236 (17%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT----------------------E 40
+ Y +L+ +C +A HM + MI K P+ VT E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 41 FSP-----SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
S + VT N LI GL G + A +I + M G+ PD ++++ ++ G + G+
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 96 LRKA-----YDLKLEMD-EMMQSNNMLAIQPLSGDVY--WSL---MGKQGGLLDEVNYTS 144
L KA Y K +M+ ++ N M+ +G V W L + +G + + YT+
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL----DKKARTQEAKKM 196
+I+ +C G +A L E+ G + S Y+ LI DK A + K+M
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 27 QMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAV 86
Q I K + D V P ++T + L+ GL +G+ E+AL + + + + PD ++ +
Sbjct: 450 QKIFKKMVSDGV---PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 87 VSGFFRIGELRKAYDLKLEMD-EMMQSNNMLAIQPLSG----------DVYWSLMGKQGG 135
+ G + G++ +DL + + ++ N ++ +SG D + M + G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
L + Y +LI A DG+ + L+ E+ G V + ++I+ L
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 118/278 (42%), Gaps = 36/278 (12%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ YC S+A + DQM FVT + P+ VT N LIHGL +A EA+
Sbjct: 156 SLLNGYCHSKRISEAVALVDQM--------FVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE-MMQSNNMLAIQPLSGDV 125
++ M G PD V++ VV+G + G+ A++L +M++ ++ ++ + G
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 126 YWSLMGKQGGLLDE----------VNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
+ M L E V Y+SLI+ C G A LL ++
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKG 235
+ LI K+ + EA+K+ +D +++ + + L+ G
Sbjct: 328 TFSALIDAFVKEGKLVEAEKL-----------------YDEMVKRSIDPSIVTYSSLING 370
Query: 236 FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
F + D +EA + M+ + PD YN LI C+
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 121/289 (41%), Gaps = 38/289 (13%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ + L+ + +G+ +A ++D+M+ + PS+VT ++LI+G R
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKR--------SIDPSIVTYSSLINGFCMHDRL 377
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA---- 117
+EA ++ M FPD V++ ++ GF + + + ++ EM + N +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 118 IQPL--SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
IQ L +GD + M G + + Y +L++ C +G++ KA + + L
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLV 230
Y+++I G+ K + ++ + C S + D + N
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDL-------FCNLSLKGVKPDVVAYN---------- 540
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDK 279
++ GF + + EA ++ M P+ YN LI R +GD+
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI--RARLRDGDR 587
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 122/309 (39%), Gaps = 45/309 (14%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C A ++ +M KG P+ VT SL++C L +GR +A
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT--YSSLISC------LCNYGRWSDA 310
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL--- 121
+L M E + PD +F+A++ F + G+L +A L EM + +++ L
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 122 --------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
+ M + D V Y +LI +C V + + E++ G V
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP--TLTFDTLIENCSNNEFTSLVE 231
+V Y++LI GL + A+++ +V + P +T++TL++ N
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMV----SDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 232 LVKGFRIRDLENEAASVLNTMLH-----------WN---------DKPDGAVYNFLIVEH 271
+V + R N M+ W+ KPD YN +I
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 272 CRCDNGDKA 280
CR + ++A
Sbjct: 547 CRKGSKEEA 555
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 111/279 (39%), Gaps = 49/279 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y +++ YC G+ +A + D M+ G P + VT N L+ G G A
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYP--------TNVTFNVLVDGYAKAGEMLTA 331
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
EI M G FPD V+FT+++ G+ R+G++ + + L
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL---------------------- 369
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
W M +G + Y+ LINA C + ++KA+ LL +L + Q +Y+ +I G
Sbjct: 370 --WEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE 244
K + EA ++ + C T T L+ G ++ E
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTI-----------------LIIGHCMKGRMFE 470
Query: 245 AASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
A S+ + M+ PD + L+ + +AY +
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 32/193 (16%)
Query: 47 TCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM 106
T N LI GL G+AE+ALE+L M G PD V++ ++ GF + EL KA ++ ++
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 107 DEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELT 166
SG V D V YTS+I+ YC G++ +A +LLD++
Sbjct: 268 K--------------SGSVCSP---------DVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 167 HFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIENCSNNE 225
G +V ++VL+ G K A+++ ++ C +P +TF +LI+
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC---FPDVVTFTSLIDG----- 356
Query: 226 FTSLVELVKGFRI 238
+ + ++ +GFR+
Sbjct: 357 YCRVGQVSQGFRL 369
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 111/279 (39%), Gaps = 49/279 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y +++ YC G+ +A + D M+ G P + VT N L+ G G A
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYP--------TNVTFNVLVDGYAKAGEMLTA 331
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
EI M G FPD V+FT+++ G+ R+G++ + + L
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL---------------------- 369
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
W M +G + Y+ LINA C + ++KA+ LL +L + Q +Y+ +I G
Sbjct: 370 --WEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE 244
K + EA ++ + C T T L+ G ++ E
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTI-----------------LIIGHCMKGRMFE 470
Query: 245 AASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
A S+ + M+ PD + L+ + +AY +
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 32/193 (16%)
Query: 47 TCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM 106
T N LI GL G+AE+ALE+L M G PD V++ ++ GF + EL KA ++ ++
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 107 DEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELT 166
SG V D V YTS+I+ YC G++ +A +LLD++
Sbjct: 268 K--------------SGSVCSP---------DVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 167 HFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIENCSNNE 225
G +V ++VL+ G K A+++ ++ C +P +TF +LI+
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC---FPDVVTFTSLIDG----- 356
Query: 226 FTSLVELVKGFRI 238
+ + ++ +GFR+
Sbjct: 357 YCRVGQVSQGFRL 369
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 33/281 (11%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y ++ +C G +A ++M G +P++VT ALIH +
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVG--------CTPNVVTYTALIHAYLKAKKVS 570
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
A E+ M G P+ V+++A++ G + G++ KA + + M S ++ +
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI---FERMCGSKDVPDV---- 623
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
D+Y+ + V Y +L++ +C V +A+ LLD ++ G ++YD LI
Sbjct: 624 -DMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
GL K + EA+++ + H +P + ++SL++ + +DL
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEH----GFPATLY----------TYSSLIDRYFKVKRQDL- 727
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
A+ VL+ ML + P+ +Y +I C+ D+AY +
Sbjct: 728 --ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 104/241 (43%), Gaps = 23/241 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS--------PSLVTCNALIHGL 55
Y L+ +C G+ KA + ++M +PD F P++VT AL+ G
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 56 GFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE------- 108
R EEA ++L M G P+ + + A++ G ++G+L +A ++K EM E
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 109 -----MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLD 163
++ + Q L+ V S M + + V YT +I+ C G+ +A L+
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKV-LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768
Query: 164 ELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSN 223
+ G V Y +I G + + ++L + ++ +T+ LI++C
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY--VTYRVLIDHCCK 826
Query: 224 N 224
N
Sbjct: 827 N 827
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 35/229 (15%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C G+ +A+ + M KG P++VT A+I G G G+ E
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGC--------QPNVVTYTAMIDGFGMIGKIETC 798
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
LE+L M G+ P+ V++ ++ + G L A++L ++EM Q+
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL---LEEMKQT------------ 843
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+W Y +I + + E +++ LLDE+ +Y +LI L
Sbjct: 844 -HWP--------THTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVEL 232
K R + A ++L + T + T+++LIE+ C N+ + +L
Sbjct: 893 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQL 941
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 128/293 (43%), Gaps = 60/293 (20%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ +C F +A + DQ++ G+ P++V N +I L G+ AL+
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGY--------EPNVVIYNTIIDSLCEKGQVNTALD 205
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY 126
+L+ M +MG+ PD V++ ++++ F G + + +M M S +++ L DVY
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI-DVY 264
Query: 127 WSLMGKQGGLLDE----------------VNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
GK+G LL+ V Y SLIN C G + +AK +L+ L G
Sbjct: 265 ----GKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW-----PTLTFDTLIEN-CSNN 224
+V Y+ LI+G K R + K+ LC S T T++TL + C
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKI-------LCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG 277
+F++ A VL M+ PD +Y F I+ CD+G
Sbjct: 374 KFSA----------------AEKVLGRMVSCGVHPD--MYTFNILLDGLCDHG 408
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 108/280 (38%), Gaps = 52/280 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y++ L+ +C S A +M+ GF PS+VT +L++G R
Sbjct: 115 YSFTTLIDCFCRCARLSLALSCLGKMMKLGF--------EPSIVTFGSLVNGFCHVNRFY 166
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA+ ++ + +G P+ V + ++ G++ A D+ M +M I+P
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM-------GIRP-- 217
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
D V Y SLI G + +L ++ G + + LI
Sbjct: 218 ---------------DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
K+ + EAKK ++ +I+ N + L+ G I L
Sbjct: 263 VYGKEGQLLEAKK-----------------QYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHC---RCDNGDK 279
+EA VLN ++ P+ YN LI +C R D+G K
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMK 345
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 133/300 (44%), Gaps = 41/300 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ C KGE KA + +M G + + T LI+GL G ++
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN--------ERTYTVLINGLFKNGVKKQG 252
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
E+ M E G+FP+ ++ V++ + G + A+ + EM E S N++ L G
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 125 VYWSL-MGKQGGLLDE----------VNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
+ + + + ++D+ + Y +LI+ +C G++ KA +L +L G
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF--DTLIENCSNN------- 224
V Y++L+SG +K T A KM+ + S T T DT S+N
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR--SDNMEKAIQL 430
Query: 225 ----EFTSLVE-------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
E LV L+ GF I+ NEA+ + +M+ N +P+ +YN +I+ +C+
Sbjct: 431 RLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 35/245 (14%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+G C + + ++A + DQM G +P+L+T N LI G G+ +
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGI--------NPNLITYNTLIDGFCGVGKLGK 356
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL + R + GL P V++ +VSGF R G+ A + EM+E I+P
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER-------GIKP--- 406
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+V YT LI+ + + KA L + G V Y VLI G
Sbjct: 407 --------------SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLE 242
K + EA ++ S+V C + + ++T+I C ++L+K ++L
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPN--EVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 243 NEAAS 247
AS
Sbjct: 511 PNVAS 515
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 101/274 (36%), Gaps = 70/274 (25%)
Query: 79 DTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------------SGDVY 126
D SF ++ G GE+ K++DL +E+ E S N++ L + D++
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 127 WSLMGKQGGLLDEVNYTSLINA-----------------------------------YCA 151
+ MGK G + +E YT LIN C
Sbjct: 222 FE-MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 152 DGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT 211
DG A + DE+ G V Y+ LI GL ++ + EA K++ + +
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL-- 338
Query: 212 LTFDTLIEN-CSNNEFTSLVELVKGFRIRDLE-------------------NEAASVLNT 251
+T++TLI+ C + + L + + R L + AA ++
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
M KP Y LI R DN +KA + +
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 138/314 (43%), Gaps = 61/314 (19%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSL-------------------------- 45
YC++G+ SKAF +M KG +PD + + P +
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIVPDTYS-YRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 46 --VTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFR-------IGEL 96
+ L+HG G+ EEAL + + M + G+ D V + ++ G + G L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCA 151
++ +D L+ D+++ ++ M+ + +GD W LM +G + +EV YT++IN C
Sbjct: 671 KEMHDRGLKPDDVIYTS-MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 152 DGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDK-KARTQEAKKMLLSLVYHLCTSSWP 210
G V +A+ L ++ V V Y + L K + Q+A ++ +++ L +
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLAN--- 786
Query: 211 TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVE 270
T T++ LI +GF + EA+ ++ M+ PD Y +I E
Sbjct: 787 TATYNMLI---------------RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINE 831
Query: 271 HCRCDNGDKAYDMY 284
CR ++ KA +++
Sbjct: 832 LCRRNDVKKAIELW 845
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 128/302 (42%), Gaps = 60/302 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C EF M D+M+ FSPS ++L+ GL G+ EE
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEML--------CLRFSPSEAAVSSLVEGLRKRGKIEE 350
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL +++ + + G+ P+ + A++ + RK ++ +L D M + + ++P
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCK---GRKFHEAELLFDRMGK----IGLRP--N 401
Query: 124 DVYWSLM----GKQGGL----------------LDEVNYTSLINAYCADGEVVKAKTLLD 163
DV +S++ ++G L L Y SLIN +C G++ A+ +
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 164 ELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW--PTL-TFDTLIEN 220
E+ + V Y L+ G K + +A ++ YH T P++ TF TL+
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRL-----YHEMTGKGIAPSIYTFTTLLSG 516
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
L + IRD A + N M WN KP+ YN +I +C + KA
Sbjct: 517 -----------LFRAGLIRD----AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 281 YD 282
++
Sbjct: 562 FE 563
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y Y +L+ +C G+ S A +MI+K + P++VT +L+ G G+
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINK--------KLEPTVVTYTSLMGGYCSKGKI 488
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+AL + M G+ P +FT ++SG FR G +R A L +EM + N ++P
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL---FNEMAEWN----VKP- 540
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+ V Y +I YC +G++ KA L E+T G V + Y LI
Sbjct: 541 ----------------NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 182 SGLDKKARTQEAK 194
GL + EAK
Sbjct: 585 HGLCLTGQASEAK 597
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 35/157 (22%)
Query: 15 KGE--FSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
KGE KA +H+ ++ KG L + T N LI G GR EEA E++ M
Sbjct: 764 KGEVDMQKAVELHNAIL-KGLLANTATY--------NMLIRGFCRQGRIEEASELITRMI 814
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
G+ PD +++T +++ R +++KA +L W+ M +
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIEL------------------------WNSMTE 850
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
+G D V Y +LI+ C GE+ KA L +E+ G
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 99/251 (39%), Gaps = 32/251 (12%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P + T +AL+HGL F A+E+ M +G+ PD +T V+ + +L +A ++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 103 KLEMDEMMQSNNMLAIQPL-----SGDVYWSLMGKQGGLL------DEVNYTSLINAYCA 151
M+ N++ L W +G + L D V Y +L+ C
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 152 DGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT 211
E ++DE+ L+ GL K+ + +EA ++ +V + P
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS---PN 366
Query: 212 L-TFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
L ++ LI++ C +F +EA + + M +P+ Y+ LI
Sbjct: 367 LFVYNALIDSLCKGRKF----------------HEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 270 EHCRCDNGDKA 280
CR D A
Sbjct: 411 MFCRRGKLDTA 421
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 36/292 (12%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y ++ +C + AF ++I G+ P+ +T + LI+GL GR
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGY--------EPNTITFSTLINGLCLEGRVS 175
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
EALE++ M EMG PD ++ +V+G G+ +A L +M E N + P+
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 122 -----SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
SG ++ M ++ LD V Y+ +I+ C G + A L +E+ G
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
+ Y++LI G R + K+L ++ + +TF LI++
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN--VVTFSVLIDS----------- 342
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
VK ++R EA + M+H PD Y LI C+ ++ DKA M
Sbjct: 343 FVKEGKLR----EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 53/285 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y ++ C G AF++ ++M KG + +++T N LI G GR
Sbjct: 263 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI--------TTNIITYNILIGGFCNAGRW 314
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++ ++LR M + + P+ V+F+ ++ F + G+LR+A +L EM I P
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-------GIAP- 366
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
D + YTSLI+ +C + + KA ++D + G +++LI
Sbjct: 367 ----------------DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
+G K R + ++ + + T+T++TLI+ F L +L
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVAD--TVTYNTLIQG-----FCELGKL--------- 454
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG--DKAYDMY 284
N A + M+ P+ Y L+ CDNG +KA +++
Sbjct: 455 -NVAKELFQEMVSRKVPPNIVTYKILL--DGLCDNGESEKALEIF 496
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 108/291 (37%), Gaps = 68/291 (23%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS------------------------- 42
L+ + +G+ +A +H +MIH+G PD +T S
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 43 --PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P++ T N LI+G R ++ LE+ R M G+ DTV++ ++ GF +G+L A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+L EM N+ V Y L++ C +GE KA
Sbjct: 459 ELFQEMVSRKVPPNI------------------------VTYKILLDGLCDNGESEKALE 494
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
+ +++ IY+++I G+ ++ +A + SL T
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI------ 548
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEH 271
++ G + +EA + M PDG YN LI H
Sbjct: 549 -----------MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 37/241 (15%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
AY Y+ + Y G+ A ++M KG +P++V CNA ++ L GR
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGI--------APNIVACNASLYSLAKAGRD 484
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA +I G+ ++GL PD+V++ ++ + ++GE+ +A L + EMM++ +P
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL---LSEMMEN----GCEP- 536
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
D + SLIN V +A + + V Y+ L+
Sbjct: 537 ----------------DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRD 240
+GL K + QEA ++ +V C + T+TF+TL + C N+E T ++++ F++ D
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPN--TITFNTLFDCLCKNDEVTLALKML--FKMMD 636
Query: 241 L 241
+
Sbjct: 637 M 637
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 28/243 (11%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C G F +AF D M +G LP+ L T N LI GL R ++ALE+
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPN--------LHTYNTLICGLLRVHRLDDALEL 420
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------ 121
M +G+ P ++ + + + G+ A + +M + N++A
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 122 ------SGDVYWSLMGKQGGLL-DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS 174
+ +++ L K GL+ D V Y ++ Y GE+ +A LL E+ G
Sbjct: 481 AGRDREAKQIFYGL--KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 175 VIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT-LTFDTLIENCSNN-EFTSLVEL 232
++ + LI+ L K R EA KM + + PT +T++TL+ N + +EL
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKE---MKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 233 VKG 235
+G
Sbjct: 596 FEG 598
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 98/248 (39%), Gaps = 46/248 (18%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
+FSP+ T LI GL GR EA ++ GM + G P+ + +++GF + GE A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
L + M K+G D Y+ L++ C G V +
Sbjct: 946 CAL------------------------FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT---LTFDT 216
EL G V Y+++I+GL K R +EA L L + TS T T+++
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA----LVLFNEMKTSRGITPDLYTYNS 1037
Query: 217 LIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDN 276
LI N I + EA + N + +P+ +N LI +
Sbjct: 1038 LILN---------------LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 277 GDKAYDMY 284
+ AY +Y
Sbjct: 1083 PEHAYAVY 1090
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 109/282 (38%), Gaps = 49/282 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y+ L+ + D + +M G +PD VT C A G FG A +
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA-----GNFGEAFD 384
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
L+++R + G+ P+ ++ ++ G R+ L A +L M+ L ++P +
Sbjct: 385 TLDVMR---DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES-------LGVKPTA- 433
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
Y I+ Y G+ V A +++ G V + +
Sbjct: 434 ----------------YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 477
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
L K R +EAK++ L L D++ N ++ + E+ +
Sbjct: 478 LAKAGRDREAKQIFYGL-------KDIGLVPDSVTYNMMMKCYSKVGEI----------D 520
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMYM 285
EA +L+ M+ +PD V N LI + D D+A+ M+M
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
AY+Y L+ ++A ++ +MI +GF PSL T ++L+ GLG
Sbjct: 188 AYSYNGLIHLLLKSRFCTEAMEVYRRMILEGF--------RPSLQTYSSLMVGLGKRRDI 239
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+ + +L+ M +GL P+ +FT + R G++ +AY++ MD+ +++ L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 122 ------------SGDVYWSL-MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
+ +V+ + G+ D V Y +L++ + + ++ K E+
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKP--DRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 169 GDVRQSVIYDVLISGLDKKARTQEA 193
G V V + +L+ L K EA
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEA 382
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 12/172 (6%)
Query: 42 SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD 101
P L T N LI GL E A ++ + G PD ++ ++ + + G++ + ++
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 102 LKLEMD-EMMQSNNMLAIQPLSG-----------DVYWSLMGKQGGLLDEVNYTSLINAY 149
L EM ++N + +SG D+Y+ LM + Y LI+
Sbjct: 842 LYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
G + +AK L + + +G IY++LI+G K A + +V
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 36/292 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+ L+ +C +G S+A + D+M+ PD LVT + LI+GL GR E
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD--------LVTVSTLINGLCLKGRVSE 193
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM----LAIQ 119
AL ++ M E G PD V++ V++ + G A DL +M+E ++ + I
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 120 PLSGD-------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
L D ++ M +G D V Y+SLI C DG+ +L E+ +
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVEL 232
V + LI K+ + EAK++ ++ + T+T+++LI+
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITR--GIAPDTITYNSLID------------- 358
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
GF + +EA + + M+ +PD Y+ LI +C+ D ++
Sbjct: 359 --GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 22/257 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ +C + +A M D M+ KG PD +VT + LI+ R ++
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD--------IVTYSILINSYCKAKRVDD 403
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
+ + R + GL P+T+++ +V GF + G+L A +L EM +++ L
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 122 ----SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+G++ +L M K L Y +I+ C +V A +L L+ G
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE-NCSNNEFTSLVE 231
V Y+V+I GL KK EA + + CT T++ LI + + S VE
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD--DFTYNILIRAHLGGSGLISSVE 581
Query: 232 LVKGFRIRDLENEAASV 248
L++ ++ +++++
Sbjct: 582 LIEEMKVCGFSADSSTI 598
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 122/317 (38%), Gaps = 57/317 (17%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT--------------------------- 39
+L+ +C A +M DQM+ G+ P+ V
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
P +VT N+LI GL GR +A ++ M + ++PD +F A++ + G + +A
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 100 YDLKLEMDEMMQSNNMLAIQPL-----------SGDVYWSLMGKQGGLLDEVNYTSLINA 148
+ EM +++ L + + M +G D V Y+ LIN
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
YC +V L E++ G VR +V Y +LI G + + A+++ +V+ C
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF--CGVH 393
Query: 209 WPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFL 267
+T++ L+ C N + +A +L M D YN +
Sbjct: 394 PNIITYNVLLHGLCDNGKI----------------EKALVILADMQKNGMDADIVTYNII 437
Query: 268 IVEHCRCDNGDKAYDMY 284
I C+ A+D+Y
Sbjct: 438 IRGMCKAGEVADAWDIY 454
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 43/242 (17%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
+L TCN L++ + AL L M ++G P V+F ++++GF R G+ + YD
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR-GD--RVYDAL 171
Query: 104 LEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLD 163
D+M+ + +P + V Y ++I+ C +V A LL+
Sbjct: 172 YMFDQMVG----MGYKP-----------------NVVIYNTIIDGLCKSKQVDNALDLLN 210
Query: 164 ELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIENCS 222
+ G V Y+ LISGL R +A +M+ + +P TF+ LI+ C
Sbjct: 211 RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR---EIYPDVFTFNALIDAC- 266
Query: 223 NNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYD 282
VK R+ +EA M+ + PD Y+ LI C D+A +
Sbjct: 267 ----------VKEGRV----SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 283 MY 284
M+
Sbjct: 313 MF 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC G+ + A + +M+ G P+++T N L+HGL G+ E+
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGV--------HPNIITYNVLLHGLCDNGKIEK 414
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD 107
AL IL M + G+ D V++ ++ G + GE+ A+D+ ++
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 19/192 (9%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C +A M M+ KG PD VT + LI+G + E +++ M
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTY--------SILINGYCKSKKVEHGMKLFCEMS 353
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------SGDVY 126
+ G+ +TV++T ++ G+ R G+L A ++ M N++ L +G +
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 127 WSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+L M K G D V Y +I C GEV A + L G + Y ++
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 182 SGLDKKARTQEA 193
GL KK +EA
Sbjct: 474 LGLYKKGLRREA 485
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 127/310 (40%), Gaps = 41/310 (13%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y ++ C G AF++ ++M KGF D ++T N LI G GR
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD--------IITYNTLIGGFCNAGRW 314
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++ ++LR M + + P+ V+F+ ++ F + G+LR+A L EM + + N + L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 122 -----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
LM +G D + + LIN YC + L E++ G
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSL 229
+ +V Y+ L+ G + + + AKK+ +V +++ L++ C N E
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD--IVSYKILLDGLCDNGELEKA 492
Query: 230 VELVKGFRIRDLE-------------------NEAASVLNTMLHWNDKPDGAVYNFLIVE 270
+E+ +E ++A + ++ K D YN +I E
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552
Query: 271 HCRCDNGDKA 280
CR D+ KA
Sbjct: 553 LCRKDSLSKA 562
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 36/292 (12%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y ++ +C + S AF +++ G+ PD V N L++GL R
Sbjct: 124 YTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPD--------TVIFNTLLNGLCLECRVS 175
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
EALE++ M EMG P ++ +V+G G++ A L M E N + P+
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 122 -----SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
SG ++ M ++ LD V Y+ +I+ C DG + A L +E+ G
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
+ Y+ LI G R + K+L ++ S +TF LI++
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR--KISPNVVTFSVLIDS----------- 342
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
VK ++R EA +L M+ P+ YN LI C+ + ++A M
Sbjct: 343 FVKEGKLR----EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 43/246 (17%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
FS VT N +++G R +ALE+L+ M E G+ P+ ++ ++ GFFR G++R A
Sbjct: 190 RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
++ LEM K+ +D V YT++++ + GE+ +A+
Sbjct: 250 WEFFLEMK------------------------KRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
+ DE+ G + Y+ +I L KK + A M +V + T++ LI
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPN--VTTYNVLIR 343
Query: 220 NCSN-NEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGD 278
+ EF+ EL++ +ENE +P+ YN +I + C +
Sbjct: 344 GLFHAGEFSRGEELMQ-----RMENEGC-----------EPNFQTYNMMIRYYSECSEVE 387
Query: 279 KAYDMY 284
KA ++
Sbjct: 388 KALGLF 393
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 85/226 (37%), Gaps = 42/226 (18%)
Query: 59 GRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAI 118
G+ ++A+++ M E G F D SF ++ + + KAY+L
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL---------------- 183
Query: 119 QPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYD 178
+ +L G+ +D V Y ++N +C KA +L E+ G Y+
Sbjct: 184 -------FRALRGRFS--VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 179 VLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRI 238
++ G + + + A + L + C T T +V GF +
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYT-----------------TVVHGFGV 277
Query: 239 RDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
A +V + M+ P A YN +I C+ DN + A M+
Sbjct: 278 AGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 34/189 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ + GE +A ++ D+MI +G L PS+ T NA+I L E A
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVL--------PSVATYNAMIQVLCKKDNVENA 319
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + M G P+ ++ ++ G F GE + +E+MQ
Sbjct: 320 VVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG-------EELMQR------------ 360
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDVLISG 183
M +G + Y +I Y EV KA L +++ GD ++ Y++LISG
Sbjct: 361 -----MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS-GDCLPNLDTYNILISG 414
Query: 184 LDKKARTQE 192
+ + R+++
Sbjct: 415 MFVRKRSED 423
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 124/289 (42%), Gaps = 36/289 (12%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ YC S A + DQM+ G+ PD +T LIHGL +A EA+
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPD--------TITFTTLIHGLFLHNKASEAVA 211
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV- 125
++ M + G P+ V++ VV+G + G++ A++L +M+ N++ + +
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 126 ----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
++ M +G + + Y+SLI+ C A LL ++ V
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKG 235
++ LI K+ + EA+K+ +D +I+ + + + L+ G
Sbjct: 332 TFNALIDAFVKEGKLVEAEKL-----------------YDEMIKRSIDPDIFTYSSLING 374
Query: 236 FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
F + D +EA + M+ + P+ YN LI C+ D+ +++
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 49/260 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +L+ +C +A HM + MI K P+ +VT N LI+G R +
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN--------VVTYNTLINGFCKAKRID 417
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
E +E+ R M + GL +TV++T ++ GFF+ + A M+ Q +S
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA--------------QMVFKQMVS 463
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
V+ ++M Y +L++ C +G++ KA + + L Y+++I
Sbjct: 464 DGVHPNIM----------TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
G+ K + ++ + C+ S + D +I N ++ GF + L+
Sbjct: 514 GMCKAGKVEDGWDL-------FCSLSLKGVKPDVIIYN----------TMISGFCRKGLK 556
Query: 243 NEAASVLNTMLHWNDKPDGA 262
EA ++ M PD
Sbjct: 557 EEADALFRKMREDGPLPDSG 576
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 49/276 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C A ++ +M +KG P+ +T SL++C L + R +A
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT--YSSLISC------LCNYERWSDA 314
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+L M E + P+ V+F A++ F + G+L +A L DEM++ +I P
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL---YDEMIKR----SIDP---- 363
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
D Y+SLIN +C + +AK + + + V Y+ LI+G
Sbjct: 364 -------------DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE 244
K R E ++ + + T+T+ TLI F+ RD +N
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGN--TVTYTTLIHGF--------------FQARDCDN- 453
Query: 245 AASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
A V M+ P+ YN L+ C+ +KA
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 121/289 (41%), Gaps = 36/289 (12%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ YC S A + DQM+ G+ PD T LIHGL +A EA+
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPD--------TFTFTTLIHGLFLHNKASEAVA 209
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV- 125
++ M + G PD V++ VV+G + G++ A +L +M+ N++ + +
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 126 ----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
++ M +G + V Y SLIN C G A LL + V
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKG 235
++ LI K+ + EA+K+ ++ ++ DT+ N L+ G
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQR-------SIDPDTITYNL----------LING 372
Query: 236 FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
F + + +EA + M+ + P+ YN LI C+C + +++
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 50/300 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y + +C + + S A + +M+ G+ PD +VT ++L++G R
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPD--------IVTLSSLLNGYCHSKRIS 170
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+A+ ++ M EMG PDT +FT ++ G F + +A L +D+M+Q QP
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL---VDQMVQR----GCQP-- 221
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
D V Y +++N C G++ A LL+++ VI++ +I
Sbjct: 222 ---------------DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 183 GLDKKARTQEAKKMLL---------------SLVYHLCT-SSWPTLT--FDTLIENCSNN 224
L K + A + SL+ LC W + ++E N
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ L+ F EA + M+ + PD YN LI C + D+A M+
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 131/302 (43%), Gaps = 49/302 (16%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------------E 40
L+ + +G+ +A +H++MI + PD +T +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P++ T N LI+G R E+ +E+ R M + GL +TV++T ++ GFF+ G+ A
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 101 DLKLEMDEMMQSNNMLAIQPL-----------SGDVYWSLMGKQGGLLDEVNYTSLINAY 149
+ +M +++ L + V + + K L+ Y ++I
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C G+V +A L L+ DV V Y+ +ISGL K QEA + + +
Sbjct: 514 CKAGKVGEAWDLFCSLSIKPDV---VTYNTMISGLCSKRLLQEADDLFRKMKED---GTL 567
Query: 210 P-TLTFDTLIE-NCSNNEFTSLVELVKGFRIRDLENEAA--SVLNTMLHWNDKPDGAVYN 265
P + T++TLI N + + + EL+K R +A+ S++ MLH + + D + N
Sbjct: 568 PNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH-DGRLDKSFLN 626
Query: 266 FL 267
L
Sbjct: 627 ML 628
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 34/256 (13%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P++VT N+LI+ L +GR +A +L M E + P+ V+F A++ FF+ G+L +A L
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 103 KLEMDEMMQSNNMLAIQPL-----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCA 151
EM + + + L + M + L + Y +LIN +C
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 152 DGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT 211
V L E++ G V +V Y +I G + A+ + +V ++ PT
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV----SNRVPT 466
Query: 212 --LTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+T+ L+ CS + + + + K + ++E LN +YN +I
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME------LNIF----------IYNTMI 510
Query: 269 VEHCRCDNGDKAYDMY 284
C+ +A+D++
Sbjct: 511 EGMCKAGKVGEAWDLF 526
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 131/308 (42%), Gaps = 38/308 (12%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C G + A + D+M G D VT N+L+ GL GR +A
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY--------NSLVAGLCCSGRWSDA 228
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNMLAI 118
++R M + P+ ++FTAV+ F + G+ +A L EM ++ N+++
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 119 QPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
+ G V LM +G L D V Y +LIN +C V + L E+ G V
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLS------------LVYHLCTSSWPTLTFDTLIENC 221
++ Y+ +I G + R A+++ L+Y LC +W L EN
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCM-NWRVEKALVLFENM 407
Query: 222 SNNE----FTSLVELVKGF-RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDN 276
+E T+ ++ G +I ++E +A + ++ KPD Y +I CR
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVE-DAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 277 GDKAYDMY 284
DK+ +Y
Sbjct: 467 WDKSDLLY 474
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 30/277 (10%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y+Y ++ C F A + +M+ G+ PD +VT ++LI+G R
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD--------VVTVSSLINGFCQGNRVF 156
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL--KLEMD----EMMQSNNML 116
+A++++ M EMG PD V + ++ G +IG + A +L ++E D + + N+++
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 117 AIQPLSGDVYWSLMGK-------QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
A SG WS + + + + + +T++I+ + +G+ +A L +E+T
Sbjct: 217 AGLCCSG--RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTS 228
Y+ LI+GL R EAK+ML +V C +T++TLI C +
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD--VVTYNTLINGFCKSKRVDE 332
Query: 229 LVELVKGFRIRDLENEAASVLNTMLH---WNDKPDGA 262
+L + R L + + NT++ +PD A
Sbjct: 333 GTKLFREMAQRGLVGDTIT-YNTIIQGYFQAGRPDAA 368
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y +L+ C G +A M D M+ KG LPD +VT N LI+G R
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD--------VVTYNTLINGFCKSKRV 330
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM--MQSNNMLAI- 118
+E ++ R M + GL DT+++ ++ G+F+ G A ++ MD +++ ++L
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYG 390
Query: 119 -----QPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
+ V + M K LD Y +I+ C G V A L L+ G
Sbjct: 391 LCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Query: 174 SVIYDVLISGLDKKAR 189
V Y +ISG +K +
Sbjct: 451 VVSYTTMISGFCRKRQ 466
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 102/254 (40%), Gaps = 45/254 (17%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
N +I+ L R AL ++ M + G PD V+ +++++GF + + A DL +M+E
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 109 MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
M +P D V Y ++I+ C G V A L D +
Sbjct: 168 M-------GFRP-----------------DVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT--------------- 213
G +V Y+ L++GL R +A +++ +V + T T
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 214 ---FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVE 270
++ + C + + + L+ G + +EA +L+ M+ PD YN LI
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 271 HC---RCDNGDKAY 281
C R D G K +
Sbjct: 324 FCKSKRVDEGTKLF 337
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 130/303 (42%), Gaps = 54/303 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y ++ C G AF++ ++M KGF D ++ LI G + GR
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD--------IIIYTTLIRGFCYAGRW 298
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++ ++LR M + + PD V+F+A++ F + G+LR+A +L EM+Q I P
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH---KEMIQR----GISP- 350
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
D V YTSLI+ +C + ++ KA +LD + G +++LI
Sbjct: 351 ----------------DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRD 240
+G K + ++ + + T+T++TLI+ C + EL + R
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVAD--TVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 241 LENEAAS--VLNTMLHWNDKPDGA-----------------VYNFLIVEHCRCDNGDKAY 281
+ + S +L L N +P+ A +YN +I C D A+
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 282 DMY 284
D++
Sbjct: 513 DLF 515
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 124/295 (42%), Gaps = 42/295 (14%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y ++ C + S AF ++I G+ PD VT FS LI+GL GR
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVT-FS-------TLINGLCLEGRVS 159
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQS---------N 113
EALE++ M EMG P ++ A+V+G G K D L +D M+++
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNG---KVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 114 NMLAIQPLSGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
+L + SG ++ M ++ LD V Y+ +I+ C DG + A L +E+
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTS 228
G +IY LI G R + K+L ++ T + F LI +C
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD--VVAFSALI-DC------- 326
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
VK ++R EA + M+ PD Y LI C+ + DKA M
Sbjct: 327 ---FVKEGKLR----EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 47/311 (15%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSL-VTCNALIHGLGFFGRAEEALE 66
L+ C G+ S A + D+M+ GF P+ VT + P L V C + G+ A+E
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT-YGPVLKVMCKS--------GQTALAME 233
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD-EMMQSNNMLAIQPLSGDV 125
+LR M E + D V ++ ++ G + G L A++L EM+ + +++ ++ + G
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 126 YWSLMGKQGGLL----------DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
Y LL D V +++LI+ + +G++ +A+ L E+ G +V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVK 234
Y LI G K+ + +A ML +V C + TF+ LI C N +EL +
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR--TFNILINGYCKANLIDDGLELFR 411
Query: 235 GFRIRDLENE-------------------AASVLNTMLHWNDKPDGAVYNFLIVEHCRCD 275
+R + + A + M+ +PD Y L+ CD
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL--DGLCD 469
Query: 276 NG--DKAYDMY 284
NG +KA +++
Sbjct: 470 NGEPEKALEIF 480
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 49/268 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ +C + + KA HM D M+ KG P++ T N LI+G ++
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGC--------GPNIRTFNILINGYCKANLIDD 405
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
LE+ R M G+ DTV++ ++ GF +G+L A +L EM+ ++P
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL---FQEMVSRR----VRP--- 455
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D V+Y L++ C +GE KA + +++ IY+++I G
Sbjct: 456 --------------DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
+ ++ +A + SL L T++ +I S +L+ R +E
Sbjct: 502 MCNASKVDDAWDLFCSL--PLKGVKPDVKTYNIMIGGLCKKGSLSEADLL----FRKMEE 555
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEH 271
+ S P+G YN LI H
Sbjct: 556 DGHS-----------PNGCTYNILIRAH 572
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 51/270 (18%)
Query: 17 EFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGL 76
+++AF ++ M+ K PD ++ LI GL G+ E+AL++L MP G+
Sbjct: 318 RYTQAFELYANMLKKNIKPD--------IILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Query: 77 FPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGL 136
PDT + AV+ G L + L+LEM E
Sbjct: 370 SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSE------------------------TESF 405
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
D +T LI + C +G V +A+ + E+ G ++ LI GL K +EA+
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEAR-- 463
Query: 197 LLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE---LVKGFRIRDLENEAASVLNTML 253
L+ H P F L + N F ++VE ++K + RDL + A +
Sbjct: 464 ---LLLHKMEVGRPASLFLRL-SHSGNRSFDTMVESGSILKAY--RDLAHFADT------ 511
Query: 254 HWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
PD YN LI CR + D A +
Sbjct: 512 --GSSPDIVSYNVLINGFCRAGDIDGALKL 539
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 107/273 (39%), Gaps = 53/273 (19%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y + LM KG S A M D M +G SP+ VT LI GL G A+
Sbjct: 199 YTFGILMDGLYKKGRTSDAQKMFDDMTGRGI--------SPNRVTYTILISGLCQRGSAD 250
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+A ++ M G +PD+V+ A++ GF ++G + +A++L
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL-------------------- 290
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
L K G +L Y+SLI+ +A L + ++Y +LI
Sbjct: 291 ----LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQ 346
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPT--LTFDTLIENCSNNEFTSLVELVKGFRIRD 240
GL K + ++A K+L SS P+ ++ DT N ++K R
Sbjct: 347 GLSKAGKIEDALKLL---------SSMPSKGISPDTYCYNA----------VIKALCGRG 387
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
L E S+ M PD + LI CR
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCR 420
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 48/288 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLP-----DFVTE--FSPSLVTCNALIHGLG 56
+ L+ C + S+A + M+ GFL D + E +P ++T N LI+GL
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 57 FFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNML 116
GR EA ++ M GL D V++ +V+G ++G+ + A +L +M+E
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET------- 290
Query: 117 AIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
I+P D V Y+++I+ C DG A+ L E+ G
Sbjct: 291 HIKP-----------------DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
Y+ +I G R +A+++L ++ LTF+ LI ++ V+ K F
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPD--VLTFNALI--------SASVKEGKLF 383
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EA + + MLH PD YN +I C+ + D A M+
Sbjct: 384 -------EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 124/296 (41%), Gaps = 50/296 (16%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C G S A ++ +M+ KG +P++ T N +I G FGR +A
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGI--------APNVFTYNCMIDGFCSFGRWSDA 350
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+LR M E + PD ++F A++S + G+L +A L DEM+ +
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL---CDEMLHRCIFPDTVTYNSM 407
Query: 125 VY--------------WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+Y + LM D V + ++I+ YC V + LL E++ G
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYH-LCTSSWPTLTFDTLIEN-CSNNEFTS 228
V + Y+ LI G + A+ + ++ H +C T+T + L+ C N +
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD---TITCNILLYGFCENEKLEE 520
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+EL + ++ ++ D YN +I C+ D+A+D++
Sbjct: 521 ALELFEVIQMSKID----------------LDTVAYNIIIHGMCKGSKVDEAWDLF 560
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C+ + A + +MI G PD +TCN L++G + EE
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD--------TITCNILLYGFCENEKLEE 520
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-----DEMMQSNNMLAI 118
ALE+ + + DTV++ ++ G + ++ +A+DL + + +Q+ N++ I
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM-I 579
Query: 119 QPLSG-------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
G +V + M G D Y +LI GE+ K+ L+ E+ G
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 32/192 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ YC G S A + + M HKG SP+ T +LI G+ R EE
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGI--------SPNSATYTSLIKGMSIISRVEE 698
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + M GL P+ +TA++ G+ ++G++ K L E M S N + P
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE----MHSKN---VHP--- 748
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+++ YT +I Y DG V +A LL+E+ G V S+ Y I G
Sbjct: 749 --------------NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 184 LDKKARTQEAKK 195
K+ EA K
Sbjct: 795 YLKQGGVLEAFK 806
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 32/191 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ C K + +AF D+M+ +G PD ++ S++ C GL + EE
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD---NYTYSILIC-----GLFNMNKVEE 593
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A++ G+ PD +++ ++ G + + + DEMM N +QP
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF---FDEMMSKN----VQP--- 643
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ V Y LI AYC G + A L +++ H G S Y LI G
Sbjct: 644 --------------NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 184 LDKKARTQEAK 194
+ +R +EAK
Sbjct: 690 MSIISRVEEAK 700
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 53/285 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + + +C G+ +A + +M G +P++VT N +I GLG GR
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV--------APNVVTFNTVIDGLGMCGRY 311
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EA M E G+ P ++++ +V G R +
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI------------------------- 346
Query: 122 SGDVYWSL--MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDV 179
GD Y+ L M K+G + + Y +LI+++ G + KA + D + G S Y+
Sbjct: 347 -GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
LI G K + A+++L ++ ++ F N + FTS++ L+ +
Sbjct: 406 LIKGYCKNGQADNAERLLKEML---------SIGF-----NVNQGSFTSVICLLCSHLMF 451
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
D A + ML N P G + LI C+ KA +++
Sbjct: 452 D---SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 125/325 (38%), Gaps = 89/325 (27%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y NL+ + + G +KA + D M+ KG S + T N LI G G+A+
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGL--------SLTSSTYNTLIKGYCKNGQADN 418
Query: 64 ALEILRGMPEMGLFPDTVSFTAVV-----------------------------------S 88
A +L+ M +G + SFT+V+ S
Sbjct: 419 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 89 GFFRIGELRKAYDLKLE------MDEMMQSNNMLAIQPLSGD------VYWSLMGKQGGL 136
G + G+ KA +L + + + SN +L +G + ++G+ G +
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR-GCV 537
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA--- 193
+D V+Y +LI+ C ++ +A LDE+ G + Y +LI GL + +EA
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 194 -----KKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASV 248
+ +L VY T+ +I+ C E T E
Sbjct: 598 WDDCKRNGMLPDVY----------TYSVMIDGCCKAERT---------------EEGQEF 632
Query: 249 LNTMLHWNDKPDGAVYNFLIVEHCR 273
+ M+ N +P+ VYN LI +CR
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCR 657
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 6 VNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEAL 65
L+ C G+ SKA + Q ++KGF+ D T NAL+HGL G+ +EA
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS--------NALLHGLCEAGKLDEAF 525
Query: 66 EILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSN------------ 113
I + + G D VS+ ++SG +L +A+ + +DEM++
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF---MFLDEMVKRGLKPDNYTYSILI 582
Query: 114 ----NMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
NM ++ +W + G L D Y+ +I+ C + + DE+
Sbjct: 583 CGLFNMNKVE--EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 170 DVRQSVIYDVLISGLDKKARTQEA 193
+V+Y+ LI + R A
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMA 664
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 32/192 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ YC G S A + + M HKG SP+ T +LI G+ R EE
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGI--------SPNSATYTSLIKGMSIISRVEE 698
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + M GL P+ +TA++ G+ ++G++ K L E M S N + P
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE----MHSKN---VHP--- 748
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+++ YT +I Y DG V +A LL+E+ G V S+ Y I G
Sbjct: 749 --------------NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 184 LDKKARTQEAKK 195
K+ EA K
Sbjct: 795 YLKQGGVLEAFK 806
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 32/191 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ C K + +AF D+M+ +G PD ++ S++ C GL + EE
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD---NYTYSILIC-----GLFNMNKVEE 593
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A++ G+ PD +++ ++ G + + + DEMM N +QP
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF---FDEMMSKN----VQP--- 643
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ V Y LI AYC G + A L +++ H G S Y LI G
Sbjct: 644 --------------NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 184 LDKKARTQEAK 194
+ +R +EAK
Sbjct: 690 MSIISRVEEAK 700
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 53/285 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + + +C G+ +A + +M G +P++VT N +I GLG GR
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV--------APNVVTFNTVIDGLGMCGRY 311
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EA M E G+ P ++++ +V G R +
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI------------------------- 346
Query: 122 SGDVYWSL--MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDV 179
GD Y+ L M K+G + + Y +LI+++ G + KA + D + G S Y+
Sbjct: 347 -GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
LI G K + A+++L ++ ++ F N + FTS++ L+ +
Sbjct: 406 LIKGYCKNGQADNAERLLKEML---------SIGF-----NVNQGSFTSVICLLCSHLMF 451
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
D A + ML N P G + LI C+ KA +++
Sbjct: 452 D---SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 125/325 (38%), Gaps = 89/325 (27%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y NL+ + + G +KA + D M+ KG S + T N LI G G+A+
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGL--------SLTSSTYNTLIKGYCKNGQADN 418
Query: 64 ALEILRGMPEMGLFPDTVSFTAVV-----------------------------------S 88
A +L+ M +G + SFT+V+ S
Sbjct: 419 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 89 GFFRIGELRKAYDLKLE------MDEMMQSNNMLAIQPLSGD------VYWSLMGKQGGL 136
G + G+ KA +L + + + SN +L +G + ++G+ G +
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR-GCV 537
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA--- 193
+D V+Y +LI+ C ++ +A LDE+ G + Y +LI GL + +EA
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 194 -----KKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASV 248
+ +L VY T+ +I+ C E T E
Sbjct: 598 WDDCKRNGMLPDVY----------TYSVMIDGCCKAERT---------------EEGQEF 632
Query: 249 LNTMLHWNDKPDGAVYNFLIVEHCR 273
+ M+ N +P+ VYN LI +CR
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCR 657
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 6 VNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEAL 65
L+ C G+ SKA + Q ++KGF+ D T NAL+HGL G+ +EA
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS--------NALLHGLCEAGKLDEAF 525
Query: 66 EILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSN------------ 113
I + + G D VS+ ++SG +L +A+ + +DEM++
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF---MFLDEMVKRGLKPDNYTYSILI 582
Query: 114 ----NMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
NM ++ +W + G L D Y+ +I+ C + + DE+
Sbjct: 583 CGLFNMNKVE--EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 170 DVRQSVIYDVLISGLDKKARTQEA 193
+V+Y+ LI + R A
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMA 664
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 56/301 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ C KG+ ++ + D M KG +P+ VT N LIHGL G+ ++A
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY--------NTLIHGLCLKGKLDKA 311
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ +L M P+ V++ +++G + R+A D A++ LS
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVK---QRRATD---------------AVRLLSS- 352
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
M ++G L++ Y+ LI+ +G+ +A +L ++ G V+Y VL+ GL
Sbjct: 353 -----MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE---------------------NCSN 223
++ + EAK++L ++ C + T+ +L++ CS
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPN--AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465
Query: 224 NEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
N+F V L+ G EA V + ML KPD Y+ +I C + D A +
Sbjct: 466 NKFCYSV-LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 284 Y 284
Y
Sbjct: 525 Y 525
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 125/298 (41%), Gaps = 26/298 (8%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+ +G+ +A + +M KG P++V + L+ GL G+
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGC--------KPNIVVYSVLVDGLCREGKPN 414
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA----I 118
EA EIL M G P+ ++++++ GFF+ G +A + EMD+ S N I
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 119 QPLSGD-------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
L G + WS M G D V Y+S+I C G + A L E+ +
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEP 534
Query: 172 RQS---VIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT--FDTLIE--NCSNN 224
+ V Y++L+ GL + A +L S++ C T +TL E N +
Sbjct: 535 KSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDK 594
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYD 282
+ L ELV R + A +++ ML P + + ++ E C+ + A D
Sbjct: 595 GRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 48/289 (16%)
Query: 14 DKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPE 73
++G + + +D +++ + SP+ ++ N +I L + A+E+ RGMPE
Sbjct: 160 NEGLYHRGLEFYDYVVNS----NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPE 215
Query: 74 MGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQ 133
PD ++ ++ G + + +A L +DEM + P+ +V + K+
Sbjct: 216 RKCLPDGYTYCTLMDGLCKEERIDEAV---LLLDEMQSEG--CSPSPVIYNVLIDGLCKK 270
Query: 134 GGLL----------------DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIY 177
G L +EV Y +LI+ C G++ KA +LL+ + + V Y
Sbjct: 271 GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 178 DVLISGLDKKARTQEAKKMLLSLV---YHLCTSSWPTLTFDTLIENCSNNEFTSLVELVK 234
LI+GL K+ R +A ++L S+ YHL N S+ L+
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSMEERGYHL------------------NQHIYSV--LIS 370
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
G EA S+ M KP+ VY+ L+ CR ++A ++
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 52/300 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C GE + A + ++M KG D +VT N L+ GL + GR +
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGAD--------VVTYNTLLTGLCYSGRWSD 229
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +LR M + + PD V+FTA++ F + G L +A +L EM+QS ++ P
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL---YKEMIQS----SVDP--- 279
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ V Y S+IN C G + AK D + G V Y+ LISG
Sbjct: 280 --------------NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 184 LDKKARTQEAKKMLL---------------SLVYHLCTSSWPTLTFDTLIENCSNNEFTS 228
K E K+ +L++ C + D S
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 229 LVE---LVKGFRIRDLENEAASVLNTMLHWNDKPDGAV-YNFLIVEHCRCDNGDKAYDMY 284
++ L+ G + E E+A V + ++K G V YN +I C+ D +KA++++
Sbjct: 386 IITHCILLHGLCVNG-EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 40/295 (13%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y++ L+ +C S A + +M+ G+ PS+VT +L+HG R
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGY--------EPSIVTFGSLLHGFCLVNRIG 158
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNML 116
+A ++ M + G P+ V + ++ G + GEL A +L EM+ +++ N +L
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 117 AIQPLSGDVYWS-------LMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
SG WS M K+ D V +T+LI+ + G + +A+ L E+
Sbjct: 219 TGLCYSGR--WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSL 229
+V Y+ +I+GL R +AKK TFD + +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKK-----------------TFDLMASKGCFPNVVTY 319
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
L+ GF + +E + M D YN LI +C+ A D++
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 97/246 (39%), Gaps = 44/246 (17%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
S L + LIH R AL +L M ++G P V+F +++ GF + + A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
L + LM K G + V Y +LI+ C +GE+ A
Sbjct: 162 SLVI------------------------LMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
LL+E+ G V Y+ L++GL R +A +ML +++
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML-----------------RDMMKR 240
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI---VEHCRCDNG 277
N + + L+ F + +EA + M+ + P+ YN +I H R +
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 278 DKAYDM 283
K +D+
Sbjct: 301 KKTFDL 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 74/253 (29%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
Y L+ C G +S A M M+ + PD VT
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGF--FRIG 94
P+ VT N++I+GL GR +A + M G FP+ V++ ++SGF FR+
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM- 331
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY--------WSLMGKQGGLLDE------- 139
+DE M+ ++ + + D++ + +GK LD
Sbjct: 332 -----------VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Query: 140 ------VNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS------VIYDVLISGLDKK 187
+ + L++ C +GE+ A L F D+R+S V Y+++I GL K
Sbjct: 381 RVTPDIITHCILLHGLCVNGEIESA------LVKFDDMRESEKYIGIVAYNIMIHGLCKA 434
Query: 188 ARTQEAKKMLLSL 200
+ ++A ++ L
Sbjct: 435 DKVEKAWELFCRL 447
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 48/288 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLP-----DFVTE--FSPSLVTCNALIHGLG 56
+ L+ C + S+A + M+ GFL D + E +P ++T N LI+GL
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 57 FFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNML 116
GR EA ++ M GL D V++ +V+G ++G+ + A +L +M+E
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET------- 290
Query: 117 AIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
I+P D V Y+++I+ C DG A+ L E+ G
Sbjct: 291 HIKP-----------------DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
Y+ +I G R +A+++L ++ + LTF+ LI ++ V+ K F
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIER--EINPDVLTFNALI--------SASVKEGKLF 383
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EA + + MLH PD YN +I C+ + D A M+
Sbjct: 384 -------EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 124/296 (41%), Gaps = 50/296 (16%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C G S A ++ +M+ KG +P++ T N +I G FGR +A
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGI--------APNVFTYNCMIDGFCSFGRWSDA 350
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+LR M E + PD ++F A++S + G+L +A L DEM+ +
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL---CDEMLHRCIFPDTVTYNSM 407
Query: 125 VY--------------WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+Y + LM D V + ++I+ YC V + LL E++ G
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYH-LCTSSWPTLTFDTLIEN-CSNNEFTS 228
V + Y+ LI G + A+ + ++ H +C T+T + L+ C N +
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD---TITCNILLYGFCENEKLEE 520
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+EL + ++ ++ D YN +I C+ D+A+D++
Sbjct: 521 ALELFEVIQMSKID----------------LDTVAYNIIIHGMCKGSKVDEAWDLF 560
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C+ + A + +MI G PD +TCN L++G + EE
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD--------TITCNILLYGFCENEKLEE 520
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-----DEMMQSNNMLAI 118
ALE+ + + DTV++ ++ G + ++ +A+DL + + +Q+ N++ I
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM-I 579
Query: 119 QPLSG-------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
G +V + M G D Y +LI GE+ K+ L+ E+ G
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 134/321 (41%), Gaps = 59/321 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS--------------------- 42
+ +L+ YC A + DQ++ GF P+ VT +
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 43 ------PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
P++VT NAL+ GL GR +A +LR M + + P+ ++FTA++ F ++G+L
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDV-----------YWSLMGKQGGLLDEVNYTSL 145
+A +L M +M ++ L + + LM + G +EV YT+L
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
I+ +C V + E++ G V ++ Y VLI G R A+++ +
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR-- 392
Query: 206 TSSWPTL-TFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAV 263
+ P + T++ L++ C N + + + + R R+++ +
Sbjct: 393 -RAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT---------------- 435
Query: 264 YNFLIVEHCRCDNGDKAYDMY 284
Y +I C+ + A+D++
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLF 456
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 19/207 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y +L+ C G +A M M G P+ V LIHG R
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY--------TTLIHGFCKSKRV 344
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNM 115
E+ ++I M + G+ +T+++T ++ G+ +G A ++ +M ++ N +
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 116 LAIQPLSGDVYWSLM-----GKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
L +G V +LM K+ ++ V YT +I C G+V A L L G
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKML 197
+ Y +ISG ++ EA +
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLF 491
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 109/299 (36%), Gaps = 72/299 (24%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT--------------------------- 39
+L+ +C F +A + D M GF+P+ V
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 213
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
VT N LI GL GR +A +LR M + + P+ + FTA++ F + G L +A
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
+L EM N+ Y SLIN +C G + AK
Sbjct: 274 RNLYKEMIRRSVVPNVFT------------------------YNSLINGFCIHGCLGDAK 309
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
+ D + G V Y+ LI+G K R ++ K+ + Y T++TLI
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD--AFTYNTLIH 367
Query: 220 N-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG 277
C + N A V N M+ PD YN L+ C C+NG
Sbjct: 368 GYCQAGKL----------------NVAQKVFNRMVDCGVSPDIVTYNILL--DCLCNNG 408
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 27/134 (20%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------- 39
A+ Y L+ YC G+ + A + ++M+ G PD VT
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 40 -----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
E ++T N +I GL + +EA + R + G+ PD +++ ++SG R G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 95 ELRKAYDLKLEMDE 108
R+A L M E
Sbjct: 479 LQREADKLCRRMKE 492
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 36/289 (12%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ YC S A + DQM+ G+ PD T LIHGL +A EA+
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPD--------TFTFTTLIHGLFLHNKASEAVA 209
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE-MMQSNNMLAIQPLSGDV 125
++ M + G PD V++ VV+G + G++ A L +M++ ++++ ++ + G
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 126 YWSLMGKQGGLLDEVN----------YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
+ M L E++ Y+SLI+ C G A LL ++ V
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKG 235
+ LI K+ + EA+K+ +D +I+ + + + L+ G
Sbjct: 330 TFSALIDAFVKEGKLVEAEKL-----------------YDEMIKRSIDPDIFTYSSLING 372
Query: 236 FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
F + D +EA + M+ + P+ Y+ LI C+ ++ +++
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 122/300 (40%), Gaps = 50/300 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y + +C + + S A + +M+ G+ PD +VT ++L++G R
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPD--------IVTLSSLLNGYCHSKRIS 170
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+A+ ++ M EMG PDT +FT ++ G F + +A L +D+M+Q QP
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL---VDQMVQR----GCQP-- 221
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
D V Y +++N C G++ A +LL ++ VIY+ +I
Sbjct: 222 ---------------DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 183 GLDKKARTQEAKKMLL---------------SLVYHLCT-SSWPTLT--FDTLIENCSNN 224
GL K +A + SL+ LC W + +IE N
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ L+ F EA + + M+ + PD Y+ LI C D D+A M+
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 51/277 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +L+ +C +A HM + MI K P+ +VT + LI G R E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN--------VVTYSTLIKGFCKAKRVE 415
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
E +E+ R M + GL +TV++T ++ GFF+ + A M+ Q +S
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA--------------QMVFKQMVS 461
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
V+ +++ Y L++ C +G++ KA + + L Y+++I
Sbjct: 462 VGVHPNIL----------TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
G+ K + ++ ++ +L L S + ++T+I GF + +
Sbjct: 512 GMCKAGKVEDGWELFCNL--SLKGVSPNVIAYNTMIS---------------GFCRKGSK 554
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDK 279
EA S+L M P+ YN LI R +GD+
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLI--RARLRDGDR 589
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 50/261 (19%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLP------------------DFVTE--- 40
+ Y L+ C + + A + D+M +G +P D + E
Sbjct: 310 VFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQ 369
Query: 41 ------FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
P +V N L++G G A I+ GM GL PD +++T ++ GF R G
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLL----------------D 138
++ A +++ EMD+ N + + + M K+G ++ D
Sbjct: 430 DVETALEIRKEMDQ-----NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 139 EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL 198
+V YT +++A+C G+ LL E+ G V V Y+VL++GL K + + A MLL
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA-DMLL 543
Query: 199 SLVYHLCTSSWPTLTFDTLIE 219
+ ++ +T++TL+E
Sbjct: 544 DAMLNIGVVP-DDITYNTLLE 563
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ +C G+ A ++ D MI +G PD +T LI G G E A
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD--------KITYTTLIDGFCRGGDVETA 434
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
LEI + M + G+ D V F+A+V G + G + D + + EM+++ I+P D
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEG---RVIDAERALREMLRA----GIKP--DD 485
Query: 125 VYWSLM----GKQG------GLLDE----------VNYTSLINAYCADGEVVKAKTLLDE 164
V +++M K+G LL E V Y L+N C G++ A LLD
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 165 LTHFGDVRQSVIYDVLISGLDKKARTQE 192
+ + G V + Y+ L+ G + A + +
Sbjct: 546 MLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 45/237 (18%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
N L++ G +A ++ + + L P VSF +++G+ ++G L + + LK +M+
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME- 302
Query: 109 MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
K D Y++LINA C + ++ A L DE+
Sbjct: 303 -----------------------KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR 339
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT-FDTLIEN-CSNNEF 226
G + VI+ LI G +R E M S L P + ++TL+ C N +
Sbjct: 340 GLIPNDVIFTTLIHG---HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 227 TSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+ A ++++ M+ +PD Y LI CR + + A ++
Sbjct: 397 VA----------------ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +M +C KG+ F + +M G +P S+VT N L++GL G+ +
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP--------SVVTYNVLLNGLCKLGQMKN 538
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM 106
A +L M +G+ PD +++ ++ G R K Y K E+
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI 581
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 136/314 (43%), Gaps = 50/314 (15%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLP------------------DFVTEFSPSLV 46
Y L+ +C KGE +A M+ +M+ P D +F ++
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 47 ---------TCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
+I GL G+ +EA EI+ M + L PD V FT +++ +F+ G ++
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 98 KAYDLKLEMDEMMQSNNMLAIQPL------SGDVYWSLMGKQGGLLDEVNYTSLINAYCA 151
A ++ ++ E +++A+ + +G ++ +++ ++V YT LI+A C
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCK 415
Query: 152 DGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT 211
+G+ ++ + L +++ G V +Y I+GL K+ +A K+ +V
Sbjct: 416 EGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE-------G 468
Query: 212 LTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEH 271
L D L + L+ G + L EA V + ML+ PD AV++ LI +
Sbjct: 469 LLLDLL----------AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
Query: 272 CRCDNGDKAYDMYM 285
+ N A D+ +
Sbjct: 519 EKEGNMAAASDLLL 532
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 62/226 (27%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
+ +M Y G A +M+ ++I +GF PD +V + +I G+ G+ EA
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD--------VVALSTMIDGIAKNGQLHEA 392
Query: 65 L------------------------------EILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
+ + + E GL PD +T+ ++G + G
Sbjct: 393 IVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
L A+ LK M + +G LLD + YT+LI + G
Sbjct: 453 NLVDAFKLKTRMVQ------------------------EGLLLDLLAYTTLIYGLASKGL 488
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
+V+A+ + DE+ + G S ++D+LI +K+ A +LL +
Sbjct: 489 MVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 42 SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD 101
SP++VT + I G + AL+ M L P+ V+FT ++ G+ + G+L A
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 102 LKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTL 161
L EM + S N+ V YT+LI+ +C GE+ +A+ +
Sbjct: 220 LYKEMRRVRMSLNV------------------------VTYTALIDGFCKKGEMQRAEEM 255
Query: 162 LDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN- 220
+ S++Y +I G ++ + A K L ++ + +I
Sbjct: 256 YSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ--GMRLDITAYGVIISGL 313
Query: 221 CSNNEFTSLVELVKGFRIRDL 241
C N + E+V+ DL
Sbjct: 314 CGNGKLKEATEIVEDMEKSDL 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 105/255 (41%), Gaps = 38/255 (14%)
Query: 34 LPDFVTEFSPSLVTCNALIHGL---GFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGF 90
+P F E P +++ N+LI G G A LE LR PD VSF ++ +GF
Sbjct: 82 MPRFGCE--PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF 139
Query: 91 FRIGELRKAYDLKLEMDEMMQ--SNNMLAIQPL------SGDVYWSL-----MGKQGGLL 137
++ L + + + M M++ S N++ SG++ +L M +
Sbjct: 140 SKMKMLDEVF---VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSP 196
Query: 138 DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
+ V +T LI+ YC G++ A +L E+ V Y LI G KK Q A++M
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256
Query: 198 LSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWND 257
+V + +L + T+I+ GF R + A L ML+
Sbjct: 257 SRMVEDRVEPN--SLVYTTIID---------------GFFQRGDSDNAMKFLAKMLNQGM 299
Query: 258 KPDGAVYNFLIVEHC 272
+ D Y +I C
Sbjct: 300 RLDITAYGVIISGLC 314
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 129/300 (43%), Gaps = 37/300 (12%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y ++ C + + S A + +M+ G+ PS+VT N+L++G R
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGY--------GPSIVTLNSLLNGFCHGNRIS 152
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-DEMMQSNNMLAIQPL 121
EA+ ++ M EMG PDTV+FT +V G F+ + +A L M + Q + + +
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 122 SG-------DVYWSLMGK--QGGL-LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+G D+ +L+ K +G + D V Y+++I++ C V A L E+ + G
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT------------------ 213
Y LIS L R +A ++L ++ + T
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 214 FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
FD +I+ + + L+ GF + D +EA + M+ + PD YN LI C+
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 114/277 (41%), Gaps = 51/277 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ +C +A + M+ K LPD +VT N LI+G + +
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD--------VVTYNTLINGFCKAKKVVD 398
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
+E+ R M GL +TV++T ++ GFF+ + A M+ Q +S
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA--------------QMVFKQMVSD 444
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
V+ ++M Y +L++ C +G++ KA + + L Y+++ G
Sbjct: 445 GVHPNIM----------TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
+ K + ++ + C+ S + D + N ++ GF + L+
Sbjct: 495 MCKAGKVEDGWDL-------FCSLSLKGVKPDVIAYN----------TMISGFCKKGLKE 537
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
EA ++ M PD YN LI H R +GDKA
Sbjct: 538 EAYTLFIKMKEDGPLPDSGTYNTLIRAHLR--DGDKA 572
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 49/316 (15%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C A ++ +M +KG PD T SL++C L +GR +A
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT--YSSLISC------LCNYGRWSDA 294
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSN---NMLAIQPL 121
+L M E + P+ V+F +++ F + G+L +A L DEM+Q + N++ L
Sbjct: 295 SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL---FDEMIQRSIDPNIVTYNSL 351
Query: 122 -----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
++LM + L D V Y +LIN +C +VV L +++ G
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSL 229
V +V Y LI G + + A+ + +V + +T++TL++ C N +
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN--IMTYNTLLDGLCKNGKLEKA 469
Query: 230 VELVKGFRIRDLENEAASVLNTMLH-----------WN---------DKPDGAVYNFLIV 269
+ + + + +E + + N M W+ KPD YN +I
Sbjct: 470 MVVFEYLQKSKMEPDIYT-YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 270 EHCRCDNGDKAYDMYM 285
C+ ++AY +++
Sbjct: 529 GFCKKGLKEEAYTLFI 544
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 36/278 (12%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ YC S A + DQM+ G+ PD +T LIHGL +A EA+
Sbjct: 85 SLLNGYCHGKRISDAVALVDQMVEMGYRPD--------TITFTTLIHGLFLHNKASEAVA 136
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV- 125
++ M + G P+ V++ VV+G + G++ A++L +M+ +++ + +
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 126 ----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
+ M +G + V Y+SLI+ C+ G A LL ++ V
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKG 235
++ LI K+ + EA+K+ D +I+ + + + L+ G
Sbjct: 257 TFNALIDAFVKEGKFVEAEKL-----------------HDDMIKRSIDPDIFTYNSLING 299
Query: 236 FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
F + D ++A + M+ + PD YN LI C+
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 122/300 (40%), Gaps = 50/300 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y L+ +C + + S A + +M+ G+ PS+VT ++L++G R
Sbjct: 46 YTYNILINCFCRRSQISLALALLGKMMKLGY--------EPSIVTLSSLLNGYCHGKRIS 97
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+A+ ++ M EMG PDT++FT ++ G F + +A L +D M+Q QP
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL---VDRMVQR----GCQP-- 148
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+ V Y ++N C G++ A LL+++ VI++ +I
Sbjct: 149 ---------------NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 183 GLDKKARTQEAKKMLL---------------SLVYHLCT-SSWPTLT--FDTLIENCSNN 224
L K +A + SL+ LC+ W + +IE N
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ L+ F EA + + M+ + PD YN LI C D DKA M+
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 107/278 (38%), Gaps = 51/278 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +L+ +C KA M + M+ K PD L T N LI G R E
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD--------LDTYNTLIKGFCKSKRVE 342
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+ E+ R M GL DTV++T ++ G F G+ A +
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV-------------------- 382
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+ M G D + Y+ L++ C +G++ KA + D + IY +I
Sbjct: 383 ----FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
G+ K + + + SL L +T++T+I G + L
Sbjct: 439 GMCKAGKVDDGWDLFCSL--SLKGVKPNVVTYNTMIS---------------GLCSKRLL 481
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
EA ++L M PD YN LI H R +GDKA
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLR--DGDKA 517
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 135/313 (43%), Gaps = 43/313 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ YC KG S A ++ ++M+ +G D +VT N ++HGL EA
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMD--------VVTYNTILHGLCKRKMLGEA 464
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE------MMQSNNMLAI 118
++ M E LFPD+ + T ++ G ++G L+ A +L +M E ++ N +L
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 119 QPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
GD+ W+ M + L ++Y+ L+NA C+ G + +A + DE+
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI------ENCSN---- 223
+I + +I G + + + L ++ ++++TLI EN S
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD--CISYNTLIYGFVREENMSKAFGL 642
Query: 224 -----NEFTSLV-------ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEH 271
E LV ++ GF ++ EA VL M+ PD + Y +I
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Query: 272 CRCDNGDKAYDMY 284
DN +A+ ++
Sbjct: 703 VSQDNLTEAFRIH 715
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ Y KG +AF + + M KG FSP + T N +I+GL G+ E
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKG--------FSPGVYTYNTVINGLCKHGKYER 323
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNMLA 117
A E+ M GL PD+ ++ +++ + G++ + + +M +++ ++M++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 118 IQPLSGDVYWSLM----GKQGGLL-DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ SG++ +LM K+ GL+ D V YT LI YC G + A L +E+ G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 173 QSVIYDVLISGLDKKARTQEAKKML 197
V Y+ ++ GL K+ EA K+
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLF 468
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 32/191 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ C KG ++AF + D+MI K P+++ CN++I G G A +
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNI--------KPTVMICNSMIKGYCRSGNASD 603
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
L M G PD +S+ ++ GF R + KA+ L +M+E
Sbjct: 604 GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE--------------- 648
Query: 124 DVYWSLMGKQGGLLDEV-NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+QGGL+ +V Y S+++ +C ++ +A+ +L ++ G Y +I+
Sbjct: 649 --------EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 183 GLDKKARTQEA 193
G + EA
Sbjct: 701 GFVSQDNLTEA 711
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 116/288 (40%), Gaps = 36/288 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ C G+ K Q+ KG PD +VT N LI G EEA E+
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPD--------IVTYNTLISAYSSKGLMEEAFEL 292
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------ 121
+ MP G P ++ V++G + G+ +A ++ EM S + + L
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 122 SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
GDV +S M + + D V ++S+++ + G + KA + + G + +VI
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
Y +LI G +K A + ++ C + +T++T++ G
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGC--AMDVVTYNTILH---------------GL 455
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
R + EA + N M PD LI HC+ N A +++
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 42/280 (15%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G+ + AF + ++M G P+ +T + L+ L R++EA+E+
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGI-------SYPNSITYSTLMDCLFAHSRSKEAVEL 254
Query: 68 LRGM-PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL----- 121
M + G+ PD V+F +++GF R GE+ +A + M + + N+ L
Sbjct: 255 FEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFC 314
Query: 122 ------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
+ + K G LD V YT+L+N +C +GE +A LL E+ ++
Sbjct: 315 KVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTL 374
Query: 176 IYDVLISGLDKKARTQEAKKML---LSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVEL 232
Y+V++ GL + R++EA +ML S HL S+ + + L C N E V+
Sbjct: 375 TYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSY-RIILNAL---CCNGELEKAVKF 430
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+ SV++ W P A +N L+V C
Sbjct: 431 L-------------SVMSERGIW---PHHATWNELVVRLC 454
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ +C GE +A + D M G +P++ +AL++G G+ +EA +
Sbjct: 274 MINGFCRAGEVERAKKILDFMKKNGC--------NPNVYNYSALMNGFCKVGKIQEAKQT 325
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNMLAIQPL 121
+ + GL DTV +T +++ F R GE +A L EM + + N +L
Sbjct: 326 FDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSS 385
Query: 122 SGDVYWSLM-----GKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
G +L G +G L++ +Y ++NA C +GE+ KA L ++ G
Sbjct: 386 EGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHAT 445
Query: 177 YDVLISGLDKKARTQEAKKMLLSLV 201
++ L+ L + T+ ++L+ +
Sbjct: 446 WNELVVRLCESGYTEIGVRVLIGFL 470
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 61/294 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ C +G S+A + ++M+ KG P P +VT A+++G G ++
Sbjct: 420 GYSAIVHALCKEGRMSEAKDLINEMLSKGHCP-------PDVVTYTAVVNGFCRLGEVDK 472
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++L+ M G P+TVS+TA+++G R G+ LE EMM +S
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK-------SLEAREMMN---------MSE 516
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ +WS + + Y+ +++ +G++ +A ++ E+ G V ++L+
Sbjct: 517 EHWWSP--------NSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQS 568
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNE----------------- 225
L + RT EA+K + + C + + F T+I C N+E
Sbjct: 569 LCRDGRTHEARKFMEECLNKGCAIN--VVNFTTVIHGFCQNDELDAALSVLDDMYLINKH 626
Query: 226 -----FTSLVE-LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+T+LV+ L K RI EA ++ MLH P Y +I +C+
Sbjct: 627 ADVFTYTTLVDTLGKKGRI----AEATELMKKMLHKGIDPTPVTYRTVIHRYCQ 676
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 117/298 (39%), Gaps = 68/298 (22%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFS--------------------- 42
Y ++ YCD +A + + M KG LPD V+ ++
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 43 -------PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
P VT N LIH L A+EAL L+ E G D + ++A+V + G
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433
Query: 96 LRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEV 155
+ +A DL N ML+ DV V YT+++N +C GEV
Sbjct: 434 MSEAKDL---------INEMLSKGHCPPDV--------------VTYTAVVNGFCRLGEV 470
Query: 156 VKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFD 215
KAK LL + G +V Y L++G+ + ++ EA++M+ ++ W
Sbjct: 471 DKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM-----NMSEEHW------ 519
Query: 216 TLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
S N T V ++ G R +EA V+ M+ P N L+ CR
Sbjct: 520 -----WSPNSITYSV-IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 38 VTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFF----RI 93
V P++VT N +I G R EEA+E+L M G PD VS+ ++ G+ RI
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIM-GYLCKEKRI 363
Query: 94 GELRK-----AYDLKLEMDEMMQSN--NMLAIQPLSGDVYWSLMGKQ--GGLLDEVNYTS 144
E+R A + L D++ + +ML + + W L Q G +D++ Y++
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVI-YDVLISGLDKKARTQEAKKMLLSLVYH 203
+++A C +G + +AK L++E+ G V+ Y +++G + +AKK+L + H
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 115/300 (38%), Gaps = 52/300 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
A+ +M Y G+ A + M G P+L+ CN I R E+
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGV--------EPNLLICNTTIDVFVRANRLEK 295
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL L M +G+ P+ V++ ++ G+ + + +A +E+ E M S
Sbjct: 296 ALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEA----IELLEDMHS----------- 340
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELT-HFGDVRQSVIYDVLIS 182
+G L D+V+Y +++ C + +V+ + L+ ++ G V V Y+ LI
Sbjct: 341 ---------KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIH 391
Query: 183 GLDKKARTQEA---------------KKMLLSLVYHLCTSSWPTLTFDTLIENCSNN--- 224
L K EA K ++V+ LC + D + E S
Sbjct: 392 MLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 451
Query: 225 -EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+ + +V GF ++A +L M KP+ Y L+ CR +A +M
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ C +A M D M+ KG L D +V+ N LI+G R E+
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD--------VVSYNTLINGFCKAKRVED 348
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
+++ R M + GL +TV++ ++ GFF+ G++ KA + +MD S ++ L G
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 124 D-----------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
V + M K+ LD V YT++I C G+V +A +L L+ G
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 173 QSVIYDVLISGLDKKARTQEAKKM 196
V Y ++SGL K E + +
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEAL 492
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 128/293 (43%), Gaps = 36/293 (12%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y + ++ +C + S A + +M+ G+ PD VT +L++G R
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPD--------RVTIGSLVNGFCRRNRVS 172
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA----I 118
+A+ ++ M E+G PD V++ A++ + + A+D E++ N++ +
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 119 QPLSGDVYWSL-------MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
L WS M K+ + + Y++L++A+ +G+V++AK L +E+
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
V Y LI+GL R EA +M +V C + ++++TLI N F
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD--VVSYNTLI-----NGFCKAKR 345
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ G ++ ++ V NT+ YN LI + + DKA + +
Sbjct: 346 VEDGMKLFREMSQRGLVSNTV----------TYNTLIQGFFQAGDVDKAQEFF 388
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 96/240 (40%), Gaps = 28/240 (11%)
Query: 45 LVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKL 104
L T N +I+ + AL IL M ++G PD V+ ++V+GF R + A L
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 105 EMDEMMQSNNMLAIQPLSGDV-----------YWSLMGKQGGLLDEVNYTSLINAYCADG 153
+M E+ +++A + + ++ + ++G + V YT+L+N C
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 154 EVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT 213
A LL ++ + Y L+ K + EAK++
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL----------------- 282
Query: 214 FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
F+ ++ + + + L+ G + D +EA + + M+ D YN LI C+
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+G CD GE KA + + M + E +VT +I G+ G+ E
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKR--------EMDLDIVTYTTVIRGMCKTGKVE 452
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL--KLEMDEMMQSNNMLAIQP 120
EA + + GL PD V++T ++SG G L + L K++ + +M+++ L+
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--- 509
Query: 121 LSGDVYWS 128
GD+ S
Sbjct: 510 -DGDITLS 516
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 125/320 (39%), Gaps = 55/320 (17%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT----------------------- 39
Y Y L+ +C + + S A + +M+ G+ PD VT
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 40 ----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
+ P T N LIHGL RA EA+ ++ M G PD V++ VV+G + G+
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 96 LRKAYDLKLEMDEMMQSNNMLAIQPLSGDV-----------YWSLMGKQGGLLDEVNYTS 144
+ A L +M++ ++ + + ++ M +G + V Y S
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHL 204
LI C G A LL ++ V + LI K+ + EA+K+
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL-------- 348
Query: 205 CTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVY 264
+D +I+ + + + L+ GF + D +EA + M+ + P+ Y
Sbjct: 349 ---------YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 265 NFLIVEHCRCDNGDKAYDMY 284
N LI C+ D+ +++
Sbjct: 400 NTLIKGFCKAKRVDEGMELF 419
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 116/284 (40%), Gaps = 38/284 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ + +G+ +A ++D+MI + PD + T ++LI+G R +EA +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHM 383
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------ 121
M FP+ V++ ++ GF + + + +L EM + N + L
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 122 -----SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
+ + + M G L D + Y+ L++ C +G+V A + + L
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
Y+++I G+ K + ++ + SL + T T ++ GF
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT-----------------TMMSGF 546
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+ L+ EA ++ M PD YN LI H R +GDKA
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR--DGDKA 588
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 121/300 (40%), Gaps = 54/300 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C+ + A ++ +M +KG P+ +VT N+LI L +GR +A
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPN--------VVTYNSLIRCLCNYGRWSDA 310
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+L M E + P+ V+F+A++ F + G+L +A L DEM++ +I P
Sbjct: 311 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL---YDEMIKR----SIDP---- 359
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
D Y+SLIN +C + +AK + + + V Y+ LI G
Sbjct: 360 -------------DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI------ENCSNNE--FTSLVE----- 231
K R E ++ + + T+T+ TLI C N + F +V
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGN--TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 232 -------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
L+ G A V + +PD YN +I C+ + +D++
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 62/290 (21%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C +G F K+ ++ +M G+ +P++VT N ++H GR + A+E+
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGY--------APTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
L M G+ D ++ ++ R + K Y L +M + M I P
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM-------IHP------- 336
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKK 187
+EV Y +LIN + +G+V+ A LL+E+ FG V ++ LI G +
Sbjct: 337 ----------NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386
Query: 188 ARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLEN--- 243
+EA KM + T S +++ L++ C N EF +L +GF +R N
Sbjct: 387 GNFKEALKMFYMMEAKGLTPS--EVSYGVLLDGLCKNAEF----DLARGFYMRMKRNGVC 440
Query: 244 --------------------EAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
EA +LN M PD Y+ LI C+
Sbjct: 441 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 490
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 120/282 (42%), Gaps = 38/282 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ C G +A + ++M G PD +VT +ALI+G GR +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD--------IVTYSALINGFCKVGRFKT 496
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A EI+ + +GL P+ + ++ ++ R+G L++A + M + + L
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 556
Query: 122 ----SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+G V + M G L + V++ LIN Y GE +KA ++ DE+T G
Sbjct: 557 SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVE 231
Y L+ GL K +EA+K L SL H ++ T+ ++TL+ C +
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSL--HAVPAAVDTVMYNTLLTAMCKSGNLA---- 670
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+A S+ M+ + PD Y LI CR
Sbjct: 671 ------------KAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 19/197 (9%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ C G +A +++ MI +G D T N L+ L G+ EA
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT--------FNVLVTSLCKAGKVAEA 567
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL--- 121
E +R M G+ P+TVSF +++G+ GE KA+ + EM ++ L
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 122 --------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
+ + + +D V Y +L+ A C G + KA +L E+ +
Sbjct: 628 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687
Query: 174 SVIYDVLISGLDKKART 190
S Y LISGL +K +T
Sbjct: 688 SYTYTSLISGLCRKGKT 704
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 32/180 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y+ L+ C G+ AF + ++MI P V E +A++ L G+A+EA
Sbjct: 937 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE--------SAMVRALAKCGKADEA 988
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+LR M +M L P SFT ++ + G + +A +L++
Sbjct: 989 TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV-------------------- 1028
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+M G LD V+Y LI CA G++ A L +E+ G + + Y LI GL
Sbjct: 1029 ----VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 117/293 (39%), Gaps = 38/293 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ Y + + S +F ++ +I G LPD +TC++L+ G+ E
Sbjct: 796 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPD--------KLTCHSLVLGICESNMLEI 847
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQS------NNMLA 117
L+IL+ G+ D +F ++S GE+ A+DL M + S + M++
Sbjct: 848 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907
Query: 118 IQPLSGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ + S M KQG + Y LIN C G++ A + +E+
Sbjct: 908 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIENCSNNEFTSLVE 231
+V ++ L K + EA L L + L PT+ +F TL+ C N
Sbjct: 968 PNVAESAMVRALAKCGKADEAT---LLLRFMLKMKLVPTIASFTTLMHLCCKN------- 1017
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
G I LE M + K D YN LI C + A+++Y
Sbjct: 1018 ---GNVIEALELRV-----VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1062
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 95/241 (39%), Gaps = 38/241 (15%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ C G +KA + +M+ + LPD T S LI GL G+ A
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS--------LISGLCRKGKTVIA 707
Query: 65 LEILRGMPEMG-LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
+ + G + P+ V +T V G F+ G+ + + +MD +
Sbjct: 708 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL-------------- 753
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
G D V ++I+ Y G++ K LL E+ + Y++L+ G
Sbjct: 754 ----------GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 803
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWP-TLTFDTLIEN-CSNNEFTSLVELVKGFRIRDL 241
K+ + + S++ + P LT +L+ C +N ++++K F R +
Sbjct: 804 YSKRKDVSTSFLLYRSIILN---GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860
Query: 242 E 242
E
Sbjct: 861 E 861
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 30/237 (12%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
N L+ GL +A+ +LR M L PD S+ V+ GF EL KA +L EM
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 109 MMQSNNMLAIQPLSGDVYWSL--MGKQGGLLDE----------VNYTSLINAYCADGEVV 156
S +++ L D + M + G L E V YTSLI +C GE+
Sbjct: 206 SGCSWSLVTWGILI-DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDT 216
+ K L DE+ GD ++ Y+ LI G K + +EA ++ F+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI-----------------FEF 307
Query: 217 LIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
+IE + L+ G EA +LN M+ +++P+ YN +I + C+
Sbjct: 308 MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 39/226 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y +L+ +CD GE + + D+++ +G SP +T N LI G G+ +EA
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGD--------SPCAITYNTLIRGFCKLGQLKEA 301
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY---DLKLEMDEMMQSNNMLAIQPL 121
EI M E G+ P+ ++T ++ G +G+ ++A +L +E DE +P
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE----------EP- 350
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+ V Y +IN C DG V A +++ + ++ Y++L+
Sbjct: 351 ----------------NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEF 226
GL K EA K+L ++ + ++++ LI C N
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 53/280 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
++Y ++ +C+ E KA + ++M G S SLVT LI G+ +
Sbjct: 178 FSYNTVIRGFCEGKELEKALELANEMKGSGC--------SWSLVTWGILIDAFCKAGKMD 229
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA+ L+ M MGL D V +T+++ GF GEL + L DE+++ + P +
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL---FDEVLERGD----SPCA 282
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDVLI 181
+ Y +LI +C G++ +A + + + G VR +V Y LI
Sbjct: 283 -----------------ITYNTLIRGFCKLGQLKEASEIFEFMIERG-VRPNVYTYTGLI 324
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRD 240
GL +T+EA ++L ++ +T++ +I C + VE+V+ + R
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEK--DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR- 381
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
+PD YN L+ C + D+A
Sbjct: 382 ---------------RTRPDNITYNILLGGLCAKGDLDEA 406
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+G C KG+ +A + M+ D P +++ NALIHGL R +
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD------PDVISYNALIHGLCKENRLHQ 442
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL-KLEMDEMMQSNNMLAIQPLS 122
AL+I + E D V+ +++ + G++ KA +L K D + N+ +
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 123 GDVYWSLMGKQGGLLDEV----------NYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
G ++ GLL ++ +Y L+++ C +G + +A L +E+ +
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSL 200
V ++++I G K + A+ +L+ +
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGM 590
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 41/244 (16%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+ P VT NAL+ G G EAL +L+ M E D+V++ +V+ + R G ++A
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+ +EM M K+G + + + YT++I+AY G+ +A
Sbjct: 372 GV-IEM-----------------------MTKKGVMPNAITYTTVIDAYGKAGKEDEALK 407
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
L + G V + Y+ ++S L KK+R+ E KML + + C+ + T++T++
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN--RATWNTMLAL 465
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
C N V V FR M +PD +N LI + RC + A
Sbjct: 466 CGNKGMDKFVNRV--FR-------------EMKSCGFEPDRDTFNTLISAYGRCGSEVDA 510
Query: 281 YDMY 284
MY
Sbjct: 511 SKMY 514
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 19/198 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y L+ Y G +A + + M KG +P+ +T +I G G+
Sbjct: 351 SVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN--------AITYTTVIDAYGKAGKE 402
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQS------NNM 115
+EAL++ M E G P+T ++ AV+S + + + +M S N M
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 116 LAIQPLSG-----DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
LA+ G + + M G D + +LI+AY G V A + E+T G
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 171 VRQSVIYDVLISGLDKKA 188
Y+ L++ L +K
Sbjct: 523 NACVTTYNALLNALARKG 540
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 46/296 (15%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPD----------FVTEFS--------- 42
+ Y L+ C+ G +S A + M+ K PD FV E
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 43 ---------PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRI 93
P +V N LI G + R EE +E+ R M + GL +TV++T ++ GFF+
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 94 GELRKAYDLKLEM------DEMMQSNNMLAIQPLSGDVYWSL-----MGKQGGLLDEVNY 142
+ A + +M ++M N +L +G+V +L M K+ LD V Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 143 TSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVY 202
T++I A C G+V L L+ G V Y ++SG +K +EA + + +
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 203 HLCTSSWP-TLTFDTLIE-NCSNNEFTSLVELVKGFRIRDLENEAAS--VLNTMLH 254
P + T++TLI + + + EL+K R +A++ ++ MLH
Sbjct: 525 D---GPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLH 577
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 64/314 (20%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT--------------------------- 39
+L+ +C S+A + DQM+ G+ PD VT
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
P LVT A+I+GL G + AL +L M + + D V + ++ G + + A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDV----YWSLMGKQGGLLDEVN-------YTSLINA 148
+DL +M+ ++ PL + WS + + E N + +LI+A
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 149 YCADGEVVKAKTLLDELTH----FGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHL 204
+ +G++V+A+ L DE+ F DV V Y+ LI G K R +E ++ +
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDV---VAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 205 CTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVY 264
+ T+T+ TLI F+ RD +N A V M+ PD Y
Sbjct: 387 LVGN--TVTYTTLIHGF--------------FQARDCDN-AQMVFKQMVSDGVHPDIMTY 429
Query: 265 NFLIVEHCRCDNGD 278
N L+ C+NG+
Sbjct: 430 NILL--DGLCNNGN 441
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 56/285 (19%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y + +C + + S A + +M+ G+ PS+VT N+L++G R
Sbjct: 111 YTYSIFINYFCRRSQLSLALAILGKMMKLGY--------GPSIVTLNSLLNGFCHGNRIS 162
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA+ ++ M EMG PDTV+FT +V G F+ + +A L ++ M+ + QP
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL---VERMV----VKGCQP-- 213
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
D V Y ++IN C GE A LL+++ VIY+ +I
Sbjct: 214 ---------------DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWP--TLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
GL K +A L + T T++ LI N S
Sbjct: 259 GLCKYKHMDDA----FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS------------ 302
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLI---VEHCRCDNGDKAYD 282
+A+ +L+ ML N PD +N LI V+ + +K YD
Sbjct: 303 ---DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 99/240 (41%), Gaps = 36/240 (15%)
Query: 60 RAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQ----SNNM 115
+ ++A+ + M + FP V F+ ++S ++ + +DL + + E MQ S+N+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNK----FDLVISLGEQMQNLGISHNL 110
Query: 116 ----LAIQPLSGDVYWSL-------MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDE 164
+ I SL M K G V SL+N +C + +A L+D+
Sbjct: 111 YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 170
Query: 165 LTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNN 224
+ G +V + L+ GL + + EA ++ +V C
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP----------------- 213
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ + ++ G R + A ++LN M + D +YN +I C+ + D A+D++
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y +L+ C KG +AF + D++ KG SPS T ALI G+ G
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGL--------SPSSYTYGALIDGVCKVGEM 380
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA---YDL---KLEMDEMMQSNNM 115
A ++ M G+ V F ++ G+ R G + +A YD+ K ++ N +
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 116 LA----IQPLSGDVYWSLMGKQGGL-LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+ ++ W +GG+ L V+YT+LI+ YC +G V +AK L E++ G
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKM 196
++ Y+V+I K+ + +EA+K+
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKL 526
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 32/181 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y NL+ YC +G +A + +M KG P+ +T N +I+ G+ +E
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGV--------QPNAITYNVMIYAYCKQGKIKE 522
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++ M G+ PD+ ++T+++ G + +DE M+
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGEC----------IADNVDEAMR------------ 560
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+S MG +G + V YT +I+ G+ +A L DE+ G + +Y LI
Sbjct: 561 --LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Query: 184 L 184
+
Sbjct: 619 M 619
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 106/284 (37%), Gaps = 36/284 (12%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
Y D G F + + D M+ KG D +C + R + LEI R M
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSID--------ERSCIVFLVAAKKRRRIDLCLEIFRRM 215
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNMLAI----QPL 121
+ G+ S T VV G R GE+ K+ L E E N ++ +
Sbjct: 216 VDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDF 275
Query: 122 SG-DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
SG + +M K G + ++V YT L+ +G++ A+ L DE+ G +Y L
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
IS +K + A L FD L E + + L+ G
Sbjct: 336 ISWNCRKGNMKRA-----------------FLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
A ++N M V+N LI +CR D+A +Y
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIY 422
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 39/309 (12%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y LM YC G+ A +HD MI G + CN+LI+G G+
Sbjct: 332 HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGV--------RTNTTICNSLINGYCKSGQLV 383
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE------MMQSNNML 116
EA +I M + L PD ++ +V G+ R G + +A L +M + +M N +L
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 117 AIQPLSGDVY-----WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
G + W +M K+G DE++ ++L+ A G+ +A L + + G +
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT--------LTFDTLIENCSN 223
++ +V+ISGL K + EAK++L ++ C + T L E +
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 224 NEFTS------LVE----LVKG-FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
E+ +E L+ G F+ R L N+ A ++ + P A Y LI C
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHL-NKVADLVIELRARGLTPTVATYGALITGWC 622
Query: 273 RCDNGDKAY 281
DKAY
Sbjct: 623 NIGMIDKAY 631
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 39/289 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ Y +KG A H+ D M + G +P ++ S G F AL +
Sbjct: 161 ILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVR---KGENFV-----ALHV 212
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY--------DLKLEMDEMMQSNNMLAIQ 119
M + PD + + VV+ + R G + KA L LE++ ++ N+++
Sbjct: 213 YDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN-VVTYNSLINGY 271
Query: 120 PLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS 174
+ GDV LM ++G + V YTSLI YC G + +A+ + + L V
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ 331
Query: 175 VIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVK 234
+Y VL+ G + + ++A ++ D +IE T L+
Sbjct: 332 HMYGVLMDGYCRTGQIRDAVRV-----------------HDNMIEIGVRTNTTICNSLIN 374
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
G+ EA + + M W+ KPD YN L+ +CR D+A +
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKL 423
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y L+ G+ +KAF + D+M KG +P+ +VT NALI GL G +
Sbjct: 756 YTYTILIHGCAIAGDINKAFTLRDEMALKGIIPN--------IVTYNALIKGLCKLGNVD 807
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
A +L +P+ G+ P+ +++ ++ G + G + +A LK +M E
Sbjct: 808 RAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 853
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 15 KGEFSKAFHMHDQMIHKGFLPD----------------------FVTEFSPSL------V 46
KGE A H++DQMI PD F E SL V
Sbjct: 203 KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVV 262
Query: 47 TCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM 106
T N+LI+G G E +LR M E G+ + V++T+++ G+ + G + +A +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE----HV 318
Query: 107 DEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNY----------------TSLINAYC 150
E+++ ++A Q + G V + G + D V SLIN YC
Sbjct: 319 FELLKEKKLVADQHMYG-VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377
Query: 151 ADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS-W 209
G++V+A+ + + + Y+ L+ G + EA L L +C
Sbjct: 378 KSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA----LKLCDQMCQKEVV 433
Query: 210 PT-LTFDTLIENCS 222
PT +T++ L++ S
Sbjct: 434 PTVMTYNILLKGYS 447
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 117/286 (40%), Gaps = 45/286 (15%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
G+F++A + + ++ +G L D +T N +I GL + EA EIL +
Sbjct: 485 GDFNEAMKLWENVLARGLLTD--------TITLNVMISGLCKMEKVNEAKEILDNVNIFR 536
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE-----MMQSNNMLAIQPLSGDVYWSLM 130
P ++ A+ G++++G L++A+ +K M+ ++ N L +SG + +
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL----ISGAFKYRHL 592
Query: 131 GKQGGLLDEV----------NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
K L+ E+ Y +LI +C G + KA E+ G I +
Sbjct: 593 NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKI 652
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
+ L + + EA +L +V FD L+ + SL E ++
Sbjct: 653 ANSLFRLDKIDEACLLLQKIV-----------DFDLLLPG-----YQSLKEFLEASATTC 696
Query: 241 LENE--AASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
L+ + A SV N+ P+ VYN I C+ + A ++
Sbjct: 697 LKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLF 742
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 25/148 (16%)
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
P+ L P+ + + ++G + G+L A L +++ S+ +
Sbjct: 711 PKKLLVPNNIVYNVAIAGLCKAGKLEDARKL---FSDLLSSDRFIP-------------- 753
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
DE YT LI+ G++ KA TL DE+ G + V Y+ LI GL K
Sbjct: 754 ------DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVD 807
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
A+++L L T + +T++TLI+
Sbjct: 808 RAQRLLHKLPQKGITPN--AITYNTLID 833
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ +C G F +A+ + + M +GF+P+ + T NA I L RA E
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN--------IYTYNAAIDSLCKKSRAPE 446
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-----MQSNNMLAI 118
A E+L GL D V++T ++ + ++ +A M++ M+ NN+L
Sbjct: 447 AYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIA 506
Query: 119 ------QPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ + + L+ G + + YTS+I+ YC +G++ A + G V
Sbjct: 507 AFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVP 566
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI-ENCSNNE 225
S Y LISGL KK+ EA K+ +++ S P +T TL E C N+
Sbjct: 567 DSFTYGSLISGLCKKSMVDEACKLYEAMIDR--GLSPPEVTRVTLAYEYCKRND 618
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 114/279 (40%), Gaps = 39/279 (13%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ C+ G ++A +MI GF P+L+ +LI GL G ++A E+
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGF--------KPNLINFTSLIDGLCKKGSIKQAFEM 309
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD--LKLEMDEMMQSNNMLAIQPLSG-- 123
L M G P+ + TA++ G + G KA+ LKL + + N + G
Sbjct: 310 LEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC 369
Query: 124 --------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
++ +S M +QG + YT+LIN +C G +A L++ + G +
Sbjct: 370 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 429
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI-ENCSNNEFTSLVELVK 234
Y+ I L KK+R EA ++L C +T+ LI E C N+
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFS--CGLEADGVTYTILIQEQCKQNDI-------- 479
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
N+A + M + D + N LI CR
Sbjct: 480 --------NQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 126/290 (43%), Gaps = 41/290 (14%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ + + G ++A M M ++G +PS +T N ++ G E A +
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGL--------TPSSITMNCVLEIAVELGLIEYAENV 204
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQ-------SNNMLAIQP 120
M G+ PD+ S+ +V G FR G++++A + M+Q + L +
Sbjct: 205 FDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA---DRWLTGMIQRGFIPDNATCTLILTA 261
Query: 121 L--SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
L +G V Y+ M G + +N+TSLI+ C G + +A +L+E+ G
Sbjct: 262 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 321
Query: 174 SVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELV 233
+ LI GL K+ T++A ++ L LV DT N + +TS ++
Sbjct: 322 VYTHTALIDGLCKRGWTEKAFRLFLKLVRS-----------DTYKPNV--HTYTS---MI 365
Query: 234 KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
G+ D N A + + M P+ Y LI HC+ + +AY++
Sbjct: 366 GGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 34/218 (15%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
AY+Y L+ +C +G A + MI G LPD +V N ++ L G+A
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD--------IVNYNTVLATLCKNGKA 419
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++ALEI + E+G P++ S+ + S + G+ +A + LE M SN I P
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE----MMSN---GIDP- 471
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
DE+ Y S+I+ C +G V +A LL ++ V Y++++
Sbjct: 472 ----------------DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
G K R ++A +L S+V + C + T T LIE
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYT--VLIE 551
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 130/308 (42%), Gaps = 63/308 (20%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT----------------------- 39
+ Y ++ C +G +AF M + KG PD ++
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 40 ----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
+ P++VT + LI L G+ EEA+ +L+ M E GL PD S+ +++ F R G
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 96 LRKAYDLKLEMDEMMQS----------NNMLAIQPLSGDVYWSL-----MGKQGGLLDEV 140
L D+ +E E M S N +LA +G +L +G+ G +
Sbjct: 384 L----DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 141 NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
+Y ++ +A + G+ ++A ++ E+ G + Y+ +IS L ++ EA ++L+ +
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 201 VYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPD 260
C +T++ + L+ K RI D A +VL +M+ +P+
Sbjct: 500 --RSCEFHPSVVTYNIV-----------LLGFCKAHRIED----AINVLESMVGNGCRPN 542
Query: 261 GAVYNFLI 268
Y LI
Sbjct: 543 ETTYTVLI 550
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 132/333 (39%), Gaps = 67/333 (20%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFV--TEF------------------------SPSLV 46
C G + ++ H+ + M+ KG+ PD + T+ P +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 47 TCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM 106
NALI+G R ++A +L M PDTV++ ++ G+L DL L++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL----DLALKV 215
Query: 107 DEMMQSNN----------MLAIQPLSGDVYWSL-----MGKQGGLLDEVNYTSLINAYCA 151
+ S+N ++ L G V +L M +G D Y ++I C
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 152 DGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT 211
+G V +A ++ L G + Y++L+ L + + +E +K++ + C +
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN--V 333
Query: 212 LTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAAS-------------------VLNT 251
+T+ LI C + + + L+K + + L +A S L T
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
M+ PD YN ++ C+ D+A +++
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 136/341 (39%), Gaps = 62/341 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------- 39
+AY L+ +C A + D+M K F PD VT
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 40 -----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
P+++T LI G +EAL+++ M GL PD ++ ++ G + G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 95 ELRKAYDL--KLEM---DEMMQSNNMLAIQPLS------GDVYWSLMGKQGGLLDEVNYT 143
+ +A+++ LE+ + + S N+L L+ G+ + M + + V Y+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 144 SLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYH 203
LI C DG++ +A LL + G + YD LI+ ++ R A + L +++
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 204 LCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLH--WN--DK 258
C + ++T++ C N + +E+ ++S NTM W+ DK
Sbjct: 398 GCLPD--IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY-NTMFSALWSSGDK 454
Query: 259 ----------------PDGAVYNFLIVEHCRCDNGDKAYDM 283
PD YN +I CR D+A+++
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 123/292 (42%), Gaps = 36/292 (12%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y ++ C G+ A+++ +MI G P++V LI R
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGC--------RPNVVIYTTLIKTFLQNSRFG 469
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNML------ 116
+A+ +L+ M E G+ PD + +++ G + + +A +EM E N
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 117 -----AIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
A + S D Y M + G L ++V T LIN YC G+V++A + + G +
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
+ Y VL++GL K + +A+++ + ++ LI N F+ L
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD--VFSYGVLI-----NGFSKLGN 642
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+ K A+S+ + M+ P+ +YN L+ CR +KA ++
Sbjct: 643 MQK----------ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 136/325 (41%), Gaps = 60/325 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPD------FVTEFSPS---LVTCNA-- 50
A+ Y + Y + EF+ A +M G LP+ + E+ + C+A
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 51 ----------------LIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
L++GL + ++A EI R M G+ PD S+ +++GF ++G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 95 ELRKAYDLKLEM-DEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDE----------VNYT 143
++KA + EM +E + N ++ L G + K LLDE V Y
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 144 SLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYH 203
++I+ YC G++ +A L DE+ G V S +Y L+ G + + A + +
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761
Query: 204 LCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWN----DKP 259
+S+ P F +L+ V F +L+ E VLN ++ + KP
Sbjct: 762 CASSTAP---------------FNALINWVFKFGKTELKTE---VLNRLMDGSFDRFGKP 803
Query: 260 DGAVYNFLIVEHCRCDNGDKAYDMY 284
+ YN +I C+ N + A +++
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELF 828
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 119/298 (39%), Gaps = 52/298 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPD-FVTEFSPSLVTCNALIHGLGFFGR 60
A Y ++ YC G+ ++AF + D+M KG +PD FV L+ G
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY---------TTLVDGCCRLND 747
Query: 61 AEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLE-MDEMMQSNNMLAIQ 119
E A+ I G + G T F A+++ F+ G+ +LK E ++ +M + +
Sbjct: 748 VERAITIF-GTNKKGCASSTAPFNALINWVFKFGKT----ELKTEVLNRLMDGSFDRFGK 802
Query: 120 PLSGDVYWSLM----GKQGGLLDE----------------VNYTSLINAYCADGEVVKAK 159
P DV +++M K+G L + YTSL+N Y G +
Sbjct: 803 P--NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
+ DE G ++Y V+I+ K+ T +A L LV + + I
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA----LVLVDQMFAKNAVDDGCKLSIS 916
Query: 220 NCSNNEFTSLVELVKGF-RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDN 276
C L+ GF ++ ++E A V+ M+ PD A LI E C N
Sbjct: 917 TCR--------ALLSGFAKVGEME-VAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 21/159 (13%)
Query: 59 GRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAI 118
G E+A + GM GL P ++ +++ G+ R +R+ Y+L +EM + + I
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-----RNIVI 415
Query: 119 QPL-----------SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
P SGD+ + M G + V YT+LI + + A +L
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
E+ G Y+ LI GL K R EA+ L+ +V
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 34/208 (16%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
G+ + + + D+M+ GF PD L T N L+H L + AL +L M E+G
Sbjct: 271 GKTDRLYRLLDEMVKDGFSPD--------LYTYNILLHHLATGNKPLAALNLLNHMREVG 322
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG 135
+ P + FT ++ G R G+L K MDE + K G
Sbjct: 323 VEPGVIHFTTLIDGLSRAGKLEAC---KYFMDETV---------------------KVGC 358
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
D V YT +I Y + GE+ KA+ + E+T G + Y+ +I G + +EA
Sbjct: 359 TPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACA 418
Query: 196 MLLSLVYHLCTSSWPTLTFDTLIENCSN 223
+L + C ++ + + TL+ N N
Sbjct: 419 LLKEMESRGCNPNF--VVYSTLVNNLKN 444
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 119/309 (38%), Gaps = 63/309 (20%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTC------------- 48
A Y LM + + GE+ + D+MI G+ P F+ + TC
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGY-PTTACTFNLLICTCGEAGLARDVVEQF 210
Query: 49 ---------------NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRI 93
NA++H L + + + M E G PD +++ V+ FR+
Sbjct: 211 IKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRL 270
Query: 94 GELRKAYDLKLEMDEMMQ--------SNNML------AIQPLSGDVYWSLMGKQGGLLDE 139
G+ + Y L +DEM++ + N+L +PL+ + M + G
Sbjct: 271 GKTDRLYRL---LDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV 327
Query: 140 VNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLS 199
+++T+LI+ G++ K +DE G V Y V+I+G ++A++M
Sbjct: 328 IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEM--- 384
Query: 200 LVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKP 259
F + E + +++GF + EA ++L M P
Sbjct: 385 --------------FKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNP 430
Query: 260 DGAVYNFLI 268
+ VY+ L+
Sbjct: 431 NFVVYSTLV 439
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 38/228 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
AY ++ +C G+ +KA+ + ++M KGF P VT
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
++V ++LI G G GR +EA IL + + GL P+ ++ +++ + E+
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPL-----------SGDVYWSLMGKQGGLLDEVNYTSL 145
+A M E+ + N + L V+W M KQG ++YT++
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
I+ G + +A L D G V S Y+ +I GL R +A
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 103/267 (38%), Gaps = 51/267 (19%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
GE K M +++ + F+PD + + LIHGL G A E E+ M E G
Sbjct: 531 GEPEKGRAMFEEIKARRFVPD--------ARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG 135
DT ++ V+ GF + G++ KAY L EM +P
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK-------GFEPTV------------- 622
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
V Y S+I+ + +A L +E VIY LI G K R EA
Sbjct: 623 ----VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 196 MLLSLVYHLCTSSWPTL-TFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLH 254
+L L+ T P L T+++L++ LVK I NEA +M
Sbjct: 679 ILEELMQKGLT---PNLYTWNSLLD-----------ALVKAEEI----NEALVCFQSMKE 720
Query: 255 WNDKPDGAVYNFLIVEHCRCDNGDKAY 281
P+ Y LI C+ +KA+
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAF 747
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 120/310 (38%), Gaps = 38/310 (12%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
YAY ++ Y G+F +A+ + ++ KG + PS++ N ++ L G+ +
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI--------PSVIAYNCILTCLRKMGKVD 360
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EAL++ M + P+ ++ ++ R G+L A++L+ M + N+ + +
Sbjct: 361 EALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 123 GDVYWSLMGKQGGLL-----------DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ S + + DE+ + SLI+ G V A + +++
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT--FDTLIENCSNNEFTSL 229
S++Y LI R ++ K+ ++ C+ L D + + + ++
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 230 VELVKGFRI----------------RDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
E +K R NE + +M D YN +I C+
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 274 CDNGDKAYDM 283
C +KAY +
Sbjct: 600 CGKVNKAYQL 609
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 94/258 (36%), Gaps = 35/258 (13%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
+F P+ LI ++ L + + M E+G P FT ++ GF + G + A
Sbjct: 163 KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222
Query: 100 YDLKLEMDEMMQSN-------NMLAIQPLSG----DVYWSL---MGKQGGLLDEVNYTSL 145
L +DEM S+ + I D+ W + G DEV YTS+
Sbjct: 223 LSL---LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
I C + +A + + L V + Y+ +I G + EA +L
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER---QRA 336
Query: 206 TSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYN 265
S P++ I C R +EA V M + P+ + YN
Sbjct: 337 KGSIPSVIAYNCILTC--------------LRKMGKVDEALKVFEEM-KKDAAPNLSTYN 381
Query: 266 FLIVEHCRCDNGDKAYDM 283
LI CR D A+++
Sbjct: 382 ILIDMLCRAGKLDTAFEL 399
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 108/295 (36%), Gaps = 44/295 (14%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ C G+ AF + D M G P+ + T N ++ L + +EA
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPN--------VRTVNIMVDRLCKSQKLDEA 431
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ M PD ++F +++ G ++G + AY + +M + N + L +
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCAD---------------GEVVKAKTLLDELTHFG 169
+ + G + Y +IN C+ GE K + + +E+
Sbjct: 492 FFNHGRKEDGHKI----YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSL 229
V + Y +LI GL K E ++ S+ C DT N
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC-------VLDTRAYNI-------- 592
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
++ GF N+A +L M +P Y +I + D D+AY ++
Sbjct: 593 --VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 50/300 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y L+ +C + + S A + +M+ G+ PS+VT ++L++G R
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGY--------EPSIVTLSSLLNGYCHGKRIS 172
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+A+ ++ M EMG PDT++FT ++ G F + +A L +D M+Q QP
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL---VDRMVQR----GCQP-- 223
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+ V Y ++N C G+ A LL+++ VI++ +I
Sbjct: 224 ---------------NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 183 GLDKKARTQEAKKMLL---------------SLVYHLCT-SSWPTLT--FDTLIENCSNN 224
L K +A + SL+ LC+ W + +IE N
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ L+ F EA + + M+ + PD YN L+ C D DKA M+
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +L+ +C KA M + M+ K PD +VT N LI G R E
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD--------VVTYNTLIKGFCKSKRVE 417
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+ E+ R M GL DTV++T ++ G F G+ A +
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV-------------------- 457
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+ M G D + Y+ L++ C +G++ KA + D + IY +I
Sbjct: 458 ----FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
G+ K + + + SL L +T++T+I G + L
Sbjct: 514 GMCKAGKVDDGWDLFCSL--SLKGVKPNVVTYNTMIS---------------GLCSKRLL 556
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
EA ++L M P+ YN LI H R +GDKA
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLR--DGDKA 592
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 19/195 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y NLM Y + +K F + D+M G PD + T N LIH + G +E
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD--------VATYNILIHSMVVRGYIDE 531
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A EI+ + G P T++FT V+ GF + G+ ++A+ L M ++ +++ L
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 122 ---------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
V ++ + G D V Y +LI+ YC+ G++ KA L+ + G +
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 173 QSVIYDVLISGLDKK 187
+ L+ GL+ K
Sbjct: 652 NESTHHALVLGLEGK 666
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 109/280 (38%), Gaps = 49/280 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ YC+ G KAF ++ G PSL T LI FG +
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGN--------PPSLTTSTILIGACSRFGSISD 461
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + R M GL D V++ ++ G+ + +L K ++L +DEM + I P
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL---IDEMRSA----GISP--- 511
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D Y LI++ G + +A ++ EL G V ++ + +I G
Sbjct: 512 --------------DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
K+ QEA + + L + CS L+ G+
Sbjct: 558 FSKRGDFQEAFILWFYM---------ADLRMKPDVVTCS--------ALLHGYCKAQRME 600
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+A + N +L KPD +YN LI +C + +KA ++
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 112/280 (40%), Gaps = 63/280 (22%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
YC G F K + + M H G PD +V I L G +EA +L +
Sbjct: 281 YCSDGYFDKGWELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKEATSVLFKL 332
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
G+ D+VS ++V+ GF ++G+ +A +KL ++ N +
Sbjct: 333 KLFGISQDSVSVSSVIDGFCKVGKPEEA--IKLIHSFRLRPNIFV--------------- 375
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
Y+S ++ C+ G++++A T+ E+ G + V Y +I G RT
Sbjct: 376 ----------YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDT-LIENCSNNEFTSLVELVKGFRIRDLENEAASVL- 249
+A + +L L + + P+LT T LI CS F S+ + FR E V+
Sbjct: 426 KAFQYFGAL---LKSGNPPSLTTSTILIGACS--RFGSISDAESVFRNMKTEGLKLDVVT 480
Query: 250 -NTMLHWNDK--------------------PDGAVYNFLI 268
N ++H K PD A YN LI
Sbjct: 481 YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 19/195 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y NLM Y + +K F + D+M G PD + T N LIH + G +E
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD--------VATYNILIHSMVVRGYIDE 531
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A EI+ + G P T++FT V+ GF + G+ ++A+ L M ++ +++ L
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 122 ---------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
V ++ + G D V Y +LI+ YC+ G++ KA L+ + G +
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 173 QSVIYDVLISGLDKK 187
+ L+ GL+ K
Sbjct: 652 NESTHHALVLGLEGK 666
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 109/280 (38%), Gaps = 49/280 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ YC+ G KAF ++ G PSL T LI FG +
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGN--------PPSLTTSTILIGACSRFGSISD 461
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + R M GL D V++ ++ G+ + +L K ++L +DEM + I P
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL---IDEMRSA----GISP--- 511
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D Y LI++ G + +A ++ EL G V ++ + +I G
Sbjct: 512 --------------DVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
K+ QEA + + L + CS L+ G+
Sbjct: 558 FSKRGDFQEAFILWFYM---------ADLRMKPDVVTCS--------ALLHGYCKAQRME 600
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+A + N +L KPD +YN LI +C + +KA ++
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 112/280 (40%), Gaps = 63/280 (22%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
YC G F K + + M H G PD +V I L G +EA +L +
Sbjct: 281 YCSDGYFDKGWELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKEATSVLFKL 332
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
G+ D+VS ++V+ GF ++G+ +A +KL ++ N +
Sbjct: 333 KLFGISQDSVSVSSVIDGFCKVGKPEEA--IKLIHSFRLRPNIFV--------------- 375
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
Y+S ++ C+ G++++A T+ E+ G + V Y +I G RT
Sbjct: 376 ----------YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 192 EAKKMLLSLVYHLCTSSWPTLTFDT-LIENCSNNEFTSLVELVKGFRIRDLENEAASVL- 249
+A + +L L + + P+LT T LI CS F S+ + FR E V+
Sbjct: 426 KAFQYFGAL---LKSGNPPSLTTSTILIGACS--RFGSISDAESVFRNMKTEGLKLDVVT 480
Query: 250 -NTMLHWNDK--------------------PDGAVYNFLI 268
N ++H K PD A YN LI
Sbjct: 481 YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ YV L+ C KG ++AF M M +G PS++T N +I+GL GR
Sbjct: 348 FLYVTLIDGICRKGNLNRAFSMLGDMEQRG--------IQPSILTYNTVINGLCMAGRVS 399
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIG------ELRKAY-DLKLEMDEMMQSNNM 115
EA E+ + G+ D ++++ ++ + ++ E+R+ + + K+ MD +M N +
Sbjct: 400 EADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVM-CNIL 453
Query: 116 LAIQPLSG-----DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
L L G D + M + D Y ++I YC G++ +A + +EL
Sbjct: 454 LKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK-SS 512
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
V +V Y+ +I L KK A ++L+ L
Sbjct: 513 VSAAVCYNRIIDALCKKGMLDTATEVLIEL 542
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 128/300 (42%), Gaps = 59/300 (19%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y N + Y G A +M+ KG D +V+ + LI GL G EEA
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRD--------VVSYSILIDGLSKEGNVEEA 296
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
L +L M + G+ P+ +++TA++ G ++G+L +A+ L N +L++
Sbjct: 297 LGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVL---------FNRILSV------ 341
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
G +DE Y +LI+ C G + +A ++L ++ G + Y+ +I+GL
Sbjct: 342 ---------GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGL 392
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVE------------ 231
R EA ++ +V +T+ TL+++ +++E
Sbjct: 393 CMAGRVSEADEVSKGVV-------GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPM 445
Query: 232 -------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
L+K F + EA ++ M + PD A Y +I +C+ ++A +M+
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 56/287 (19%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGF---LPDFVTEFSPSLVTCNALIHGLGFF 58
+ + +L+ + +KGE A + + M +K +FV C+A+I G
Sbjct: 134 SLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFV---------CSAVISGFCKI 184
Query: 59 GRAEEALEILRGMPEMG-LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA 117
G+ E AL + G L P+ V++T +VS ++G++ + DL +++
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLED--------- 235
Query: 118 IQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIY 177
+G D V Y++ I+ Y G +V A E+ G R V Y
Sbjct: 236 ---------------EGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSY 280
Query: 178 DVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF- 236
+LI GL K+ +EA +L ++ + T T +++G
Sbjct: 281 SILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYT-----------------AIIRGLC 323
Query: 237 RIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
++ LE EA + N +L + D +Y LI CR N ++A+ M
Sbjct: 324 KMGKLE-EAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 35/190 (18%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C +G F A ++ M KG F PS + L+ L R+ +A ++
Sbjct: 597 CKRGSFEAAIEVYMIMRRKGLTVTF-----PSTIL-KTLVDNL----RSLDAYLLVVNAG 646
Query: 73 EMGLFP-DTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
E L D + +T +++G + G L KA +L S
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNL------------------------CSFAK 682
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
+G L+ + Y SLIN C G +V+A L D L + G V V Y +LI L K+
Sbjct: 683 SRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFL 742
Query: 192 EAKKMLLSLV 201
+A+K+L S+V
Sbjct: 743 DAEKLLDSMV 752
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 42/205 (20%)
Query: 45 LVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKL 104
LV CN L+ G EA + R MPEM L PDT ++ ++ G+ + G++ +A L
Sbjct: 447 LVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEA----L 502
Query: 105 EMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDE 164
EM ++ +++ A V Y +I+A C G + A +L E
Sbjct: 503 EMFNELRKSSVSA---------------------AVCYNRIIDALCKKGMLDTATEVLIE 541
Query: 165 LTHFG---DVRQS--VIYDVLISGLDKKARTQEAKKMLLSLVY---HLCTSSWPTLTFDT 216
L G D+ S +++ + +G DK +L LVY L + + D
Sbjct: 542 LWEKGLYLDIHTSRTLLHSIHANGGDKG---------ILGLVYGLEQLNSDVCLGMLNDA 592
Query: 217 LIENCSNNEFTSLVELVKGFRIRDL 241
++ C F + +E+ R + L
Sbjct: 593 ILLLCKRGSFEAAIEVYMIMRRKGL 617
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 132/314 (42%), Gaps = 45/314 (14%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ C+ G+ AF QM+ +G P++ T ++L+ G G +
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGC--------HPNIYTLSSLVKGCFLRGTTFD 334
Query: 64 ALEILRGMPE-MGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
AL++ M GL P+ V++ +V GF G + KA + M+E+ S N+ L
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 122 ---------SGDVY-WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
G VY W+ M G + V YT+++ A C + +A++L++ ++
Sbjct: 395 NGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSL-VYHLCTSSWPTLTFDTLIENCSN-NEFTSL 229
++ I GL R A+K+ + H C + +T++ L++ + N
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPN--IVTYNELLDGLAKANRIEEA 512
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWN--------------------DKPDGAVYNFLIV 269
L + +R +E ++S NT+LH + PD N +I+
Sbjct: 513 YGLTREIFMRGVE-WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIIL 571
Query: 270 EHCRCDNGDKAYDM 283
+C+ ++A M
Sbjct: 572 AYCKQGKAERAAQM 585
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 29/260 (11%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
F P++ T N L+ L + + A ++L M G PD VS+T V+S +G +++
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWS-------LMGKQGGLLDEVNYTSLINAYCADG 153
+L + ++ N L I L + + M ++G + ++Y++LIN C G
Sbjct: 237 ELAERFEPVVSVYNAL-INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 154 EVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT 213
++ A + L ++ G L+ G + T +A + ++ +
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP-NVVA 354
Query: 214 FDTLIEN-CSNNEFTSLV-------------------ELVKGFRIRDLENEAASVLNTML 253
++TL++ CS+ V L+ GF R + A + N ML
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Query: 254 HWNDKPDGAVYNFLIVEHCR 273
P+ VY ++ CR
Sbjct: 415 TSGCCPNVVVYTNMVEALCR 434
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+P++ TCN L+ L E A ++L +P MGL P+ V++T ++ G+ G++ A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA- 245
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
K ++EM+ +G D YT L++ YC G +A T
Sbjct: 246 --KRVLEEMLD---------------------RGWYPDATTYTVLMDGYCKLGRFSEAAT 282
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
++D++ V Y V+I L K+ ++ EA+ M FD ++E
Sbjct: 283 VMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM-----------------FDEMLER 325
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG 277
+ + +++ +EA + ML N PD A+ + LI H C G
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI--HWLCKEG 380
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 22/232 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++G Y +G+ A + ++M+ +G+ PD T L+ G GR E
Sbjct: 228 TYTTILGGYVARGDMESAKRVLEEMLDRGWYPD--------ATTYTVLMDGYCKLGRFSE 279
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFF---RIGELRKAYDLKLEMDEMMQSNNML-AIQ 119
A ++ M + + P+ V++ ++ + GE R +D LE M S+ I
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 120 PLSGD-------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
L D W M K + D ++LI+ C +G V +A+ L DE G +
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIP 398
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNN 224
+ Y+ LI+G+ +K EA ++ + C + T++ LIE S N
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPN--AFTYNVLIEGLSKN 448
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 28/211 (13%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y LM YC G FS+A + D M E P+ VT +I L ++
Sbjct: 261 ATTYTVLMDGYCKLGRFSEAATVMDDMEK--------NEIEPNEVTYGVMIRALCKEKKS 312
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA + M E PD+ V+ ++ +A L +M+++N M L
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGL---WRKMLKNNCMPDNALL 369
Query: 122 SGDVYWSLMGKQG------GLLDE---------VNYTSLINAYCADGEVVKAKTLLDELT 166
S ++W + K+G L DE + Y +LI C GE+ +A L D++
Sbjct: 370 STLIHW--LCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMY 427
Query: 167 HFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
+ Y+VLI GL K +E ++L
Sbjct: 428 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C+KGE ++A + D M + + P+ T N LI GL G +E
Sbjct: 402 TYNTLIAGMCEKGELTEAGRLWDDMYER--------KCKPNAFTYNVLIEGLSKNGNVKE 453
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
+ +L M E+G FP+ +F + G ++G+
Sbjct: 454 GVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y ++ C +G+ A + ++M +G +PD VT N++I G G GR
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY--------NSMIDGFGKVGRL 313
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++ + M +M PD +++ A+++ F + G+L + EM N+++ L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 122 -----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
++ M + G + +E YTSLI+A C G + A L +E+ G
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKML 197
V Y LI GL R +EA+++
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELF 460
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 27/206 (13%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y +L+ C G S AF + ++M+ G ++VT ALI GL R +
Sbjct: 403 YTYTSLIDANCKIGNLSDAFRLGNEMLQVGV--------EWNVVTYTALIDGLCDAERMK 454
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA E+ M G+ P+ S+ A++ GF + + +A +L E+ ++L L
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL----LY 510
Query: 123 GDVYWSL---------------MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTH 167
G W L M + G + + YT+L++AY G + LLDE+
Sbjct: 511 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Query: 168 FGDVRQSVIYDVLISGLDKKARTQEA 193
V + VLI GL K +A
Sbjct: 571 LDIEVTVVTFCVLIDGLCKNKLVSKA 596
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 29/265 (10%)
Query: 31 KGFLPDFVTEFS-PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSG 89
K F D + + P++ T N +I + G E A + M GL PDTV++ +++ G
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 90 FFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-----------SGDVYWSLMGKQGGLLD 138
F ++G L EM +M +++ L G ++ M G +
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 139 EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL 198
V+Y++L++A+C +G + +A ++ G V Y LI K +A ++
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 199 SLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDK 258
++ W +T+ LI+ + E R++ EA + M
Sbjct: 427 EMLQ--VGVEWNVVTYTALIDGLCDAE-----------RMK----EAEELFGKMDTAGVI 469
Query: 259 PDGAVYNFLIVEHCRCDNGDKAYDM 283
P+ A YN LI + N D+A ++
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALEL 494
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G+ S A + QM+ K +P+ +VT +++I+G G EE
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN--------VVTYSSMINGYVKKGMLEE 417
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-MQSNNML------ 116
A+ +LR M + + P+ ++ V+ G F+ G+ A +L EM + ++ NN +
Sbjct: 418 AVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVN 477
Query: 117 ------AIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
I+ + G V M +G LD++NYTSLI+ + G+ A +E+ G
Sbjct: 478 HLKRIGRIKEVKGLV--KDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Query: 171 VRQSVIYDVLISGLDK 186
V Y+VLISG+ K
Sbjct: 536 PWDVVSYNVLISGMLK 551
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 126/323 (39%), Gaps = 78/323 (24%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ +C G S A + + S VT N +I GL G A+EA +
Sbjct: 135 LIHSFCKVGRLSFAISLLRNRV-----------ISIDTVTYNTVISGLCEHGLADEAYQF 183
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE---------MMQSNNMLAI 118
L M +MG+ PDTVS+ ++ GF ++G +A L E+ E + N+ AI
Sbjct: 184 LSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAI 243
Query: 119 QPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKA-------------------K 159
+ D+ S G D V ++S+IN C G+V++
Sbjct: 244 EEAYRDMVMS-----GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYT 298
Query: 160 TLLDELTHFGDVRQS----------------VIYDVLISGLDKKARTQEAK---KMLL-- 198
TL+D L R + V+Y VL+ GL K +EA+ KMLL
Sbjct: 299 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 358
Query: 199 ----------SLVYHLCTS---SWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEA 245
+LV LC + S ++E + ++ G+ + + EA
Sbjct: 359 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 418
Query: 246 ASVLNTMLHWNDKPDGAVYNFLI 268
S+L M N P+G Y +I
Sbjct: 419 VSLLRKMEDQNVVPNGFTYGTVI 441
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 101/225 (44%), Gaps = 31/225 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQM--------------------IHKGFLPDFVTEFSP 43
+Y L+ +C G F +A + D++ I + + ++ F P
Sbjct: 198 SYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDP 257
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
+VT +++I+ L G+ E +LR M EM ++P+ V++T +V F+ R A L
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317
Query: 104 LEMDEMMQSNNMLAIQPL------SGDVY-----WSLMGKQGGLLDEVNYTSLINAYCAD 152
+M +++ L +GD+ + ++ + + + V YT+L++ C
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 377
Query: 153 GEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
G++ A+ ++ ++ + V Y +I+G KK +EA +L
Sbjct: 378 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 32/194 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G KA + M +GF+PD VT N+L+HG +
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD--------TVTFNSLMHGYFVGSHVRK 731
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL M E G+ P+ ++ ++ G G +++
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEV------------------------ 767
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D + S M +G D+ Y +LI+ G + + T+ E+ G V ++ Y+VLIS
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISE 827
Query: 184 LDKKARTQEAKKML 197
+ +A+++L
Sbjct: 828 FANVGKMLQARELL 841
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 27/135 (20%)
Query: 42 SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD 101
SP + N LIH GR A+ +LR + DTV++ V+SG G +AY
Sbjct: 126 SPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQ 182
Query: 102 LKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTL 161
+ S M K G L D V+Y +LI+ +C G V+AK L
Sbjct: 183 ------------------------FLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKAL 218
Query: 162 LDELTHFGDVRQSVI 176
+DE++ + +++
Sbjct: 219 VDEISELNLITHTIL 233
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 51/275 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y LM YC + S+A +M D M+ + SP +VT +LI G R ++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVR--------NKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
+++ R + + GL + V+++ +V GF + G+++ A +L EM
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS--------------- 431
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
G L D + Y L++ C +G++ KA + ++L V+Y +I G
Sbjct: 432 ---------HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
+ K + ++A + SL C P + T+ ++ G + +
Sbjct: 483 MCKGGKVEDAWNLFCSLP---CKGVKPNVMTYTV--------------MISGLCKKGSLS 525
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGD 278
EA +L M + P+ YN LI H R +GD
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLR--DGD 558
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 116/264 (43%), Gaps = 49/264 (18%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+ P T N LI GL G+ EA+ ++ M E G PD V++ ++V+G R G+ A
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
DL +M+E + + DV+ Y+++I++ C DG + A +
Sbjct: 214 DLLRKMEE----------RNVKADVF--------------TYSTIIDSLCRDGCIDAAIS 249
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE- 219
L E+ G V Y+ L+ GL K + + +L +V + +TF+ L++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN--VITFNVLLDV 307
Query: 220 -------NCSNNEFTSLV------------ELVKGFRIRDLENEAASVLNTMLHWNDKPD 260
+N + ++ L+ G+ +++ +EA ++L+ M+ PD
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 261 GAVYNFLIVEHC---RCDNGDKAY 281
+ LI +C R D+G K +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVF 391
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A Y L+ +C G+ A + +M+ G LPD +T L+ GL G+
Sbjct: 403 AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY--------GILLDGLCDNGKL 454
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD-EMMQSNNMLAIQP 120
E+ALEI + + + V +T ++ G + G++ A++L + + ++ N M
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 121 LSG----------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG- 169
+SG ++ M + G ++ Y +LI A+ DG++ + L++E+ G
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 170 --DVRQ-SVIYDVLISGLDK 186
D ++ D+L+S + +
Sbjct: 575 SADASSIKMVIDMLLSAMKR 594
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 50/267 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------------ 39
Y L+ CD+G KAF++ D+MI +G P+ T
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 40 ---EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
PS++T NALI+G GR A E+L M + P+ +F ++ G R+G+
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQG------GLLDEVN--------- 141
KA L + M+ +N L+ +S +V + ++G LL +N
Sbjct: 423 YKAVHL---LKRML--DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Query: 142 -YTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
+T++INA+C G+ A L + G V LI G+ K +T++A +L +L
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 201 VYH--LCTSSWPTLTFDTLIENCSNNE 225
V L T + D L + C E
Sbjct: 538 VKMRILTTPHSLNVILDMLSKGCKVKE 564
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 110/266 (41%), Gaps = 42/266 (15%)
Query: 18 FSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLF 77
F + ++ D + + VT +P+ V+ + LIHGL GR EEA + M E G
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVT-CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 78 PDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLL 137
P T ++T ++ G + KA++L DEM+ +G
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNL---FDEMIP---------------------RGCKP 334
Query: 138 DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
+ YT LI+ C DG++ +A + ++ + Y+ LI+G K R A ++L
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394
Query: 198 LSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWND 257
+ C + TF+ L+E L + K ++ A +L ML
Sbjct: 395 TVMEKRACKPN--VRTFNELMEG--------LCRVGKPYK-------AVHLLKRMLDNGL 437
Query: 258 KPDGAVYNFLIVEHCRCDNGDKAYDM 283
PD YN LI CR + + AY +
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKL 463
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 109/279 (39%), Gaps = 49/279 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ +Y L+ C+ G +AF + DQM KG PS T LI L G
Sbjct: 266 SVSYSILIHGLCEVGRLEEAFGLKDQMGEKG--------CQPSTRTYTVLIKALCDRGLI 317
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++A + M G P+ ++T ++ G R G++ +A N + + +
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA--------------NGVCRKMV 363
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
++ S+ + Y +LIN YC DG VV A LL + ++ L+
Sbjct: 364 KDRIFPSV----------ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
GL + + +A +L +++N + + S L+ G
Sbjct: 414 EGLCRVGKPYKAVHLL-----------------KRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
N A +L++M ++ +PD + +I C+ D A
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 93/237 (39%), Gaps = 56/237 (23%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
LM C G+ KA H+ +M+ G PD V+ N LI GL G A ++
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY--------NVLIDGLCREGHMNTAYKL 463
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGE-----------LRKAYDL-------------- 102
L M + PD ++FTA+++ F + G+ LRK L
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Query: 103 ------KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
L + E + +L P S +V ++ K + +E+ IN VV
Sbjct: 524 VGKTRDALFILETLVKMRILT-TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV 582
Query: 157 KAKTLLDELTHFGDVRQSV----------------IYDVLISGLDKKARTQEAKKML 197
TL+D L GD+ S Y ++I+GL + R +EA+K+L
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 20/232 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ G+ + +F + + M G LP+ P + +I+GL FGR EE
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY----PYTI----IINGLCQFGRVEE 634
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-MQSNNMLAIQPLS 122
A ++L M + G+ P+ V++T +V G+ G+L +A + M E + N+ + L
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
G V + ++G E + S I D E + L+ + G + L++
Sbjct: 695 GFV----LSQKGIDNSEESTVSDIALRETDPECINE--LISVVEQLGGCISGLCI-FLVT 747
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELV 233
L K+ RT E+ ++ +++ + D ++E+ CS + T +EL+
Sbjct: 748 RLCKEGRTDESNDLVQNVLER---GVFLEKAMDIIMESYCSKKKHTKCMELI 796
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 44/245 (17%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
+ P++++ N+LI+GL G+ EA+ + M G+ P+ +++ A+++GF + L++A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
D+ + S+ G QG + Y LI+AYC G++
Sbjct: 386 LDM-----------------------FGSVKG-QGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLI 218
L +E+ G V Y+ LI+GL + + AKK L L + P L TF L+
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK----LFDQLTSKGLPDLVTFHILM 477
Query: 219 ENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGD 278
E G+ + +AA +L M KP YN ++ +C+ N
Sbjct: 478 E---------------GYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 279 KAYDM 283
A +M
Sbjct: 523 AATNM 527
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 33/260 (12%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
+ P++ T N +I+ L G+ +A +++ M G P+ VS+ ++ G+ ++G K
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 100 YDLKLEMDEMMQ---SNNMLAIQPLSGDVYWSLMGKQGG------LLDE------VNYTS 144
Y + EM++ S N+ L D +W G +LD+ ++Y S
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILI-DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHL 204
LIN C G++ +A ++ D++ G + Y+ LI+G K +EA M S+
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 205 CTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVY 264
+ T ++ LI+ + L ++ GF +++ E E ++ PD Y
Sbjct: 397 AVPT--TRMYNMLID-----AYCKLGKIDDGFALKE-EMEREGIV---------PDVGTY 439
Query: 265 NFLIVEHCRCDNGDKAYDMY 284
N LI CR N + A ++
Sbjct: 440 NCLIAGLCRNGNIEAAKKLF 459
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 34/194 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ YC G+ F + ++M +G +PD + T N LI GL G E A
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPD--------VGTYNCLIAGLCRNGNIEAA 455
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
++ + GL PD V+F ++ G+ R GE RKA L EM +M ++P
Sbjct: 456 KKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKM-------GLKP---- 503
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI-YDVLISG 183
+ Y ++ YC +G + A + ++ +R +V Y+VL+ G
Sbjct: 504 -------------RHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 184 LDKKARTQEAKKML 197
+K + ++A +L
Sbjct: 551 YSQKGKLEDANMLL 564
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C G A + DQ+ KG P LVT + L+ G G + +
Sbjct: 438 TYNCLIAGLCRNGNIEAAKKLFDQLTSKGL---------PDLVTFHILMEGYCRKGESRK 488
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +L+ M +MGL P +++ V+ G+ + G L+ A +++ +M++ +
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLR---------- 538
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
++ +Y L+ Y G++ A LL+E+ G V + Y+++
Sbjct: 539 -------------MNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 38/224 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------EFSPSL----- 45
++Y L+ C G+ AF + QM K +P+ V+ F +L
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434
Query: 46 ----------VTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
V+ N L+ GR+EEAL+ILR M +G+ D V++ A++ G+ + G+
Sbjct: 435 MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 96 LRKAYDLKLEMDEMMQSNNMLAIQPL-----SGDVYWSLMG-----KQGGL-LDEVNYTS 144
+ + EM N+L L G +Y M K GL D V Y++
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 145 LINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKA 188
LI+A C +G V A +L+DE+T G V Y+ +I + A
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+++ YC G FS+A+ + + T S V N LG G+ EEA+E
Sbjct: 366 SILQCYCQMGNFSEAYDLFKEFRE--------TNISLDRVCYNVAFDALGKLGKVEEAIE 417
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV- 125
+ R M G+ PD +++T ++ G G+ A+DL +EMD ++ +++ L+G +
Sbjct: 418 LFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLA 477
Query: 126 ----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
+M +G V + +I GE+ KA+ + L H +
Sbjct: 478 TNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA- 536
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKG 235
++ G A + + L + L S + TL F +L C+ ++ S
Sbjct: 537 ---SMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTL-FTSL---CAEKDYIS------- 582
Query: 236 FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+A +L+ M +P+ ++Y LI CR +N KA + +
Sbjct: 583 --------KAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFF 623
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 30/299 (10%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+G C +G+ S AF + +M G PD +V N L GL G A+EA
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPD--------IVIYNVLAGGLATNGLAQEA 485
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG- 123
E L+ M G+ P V+ V+ G GEL KA ++ + N+ ++
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAA 545
Query: 124 ---DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV-KAKTLLDELTHFGDVRQSVIYDV 179
D + + L + Y +L + CA+ + + KA+ LLD + G + +Y
Sbjct: 546 GCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGK 605
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN--CSNNEFTSLVELVKGFR 237
LI + ++A++ LV P L T++ N C NE L + +
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIV---PDLFTYTIMINTYCRLNEPKQAYALFEDMK 662
Query: 238 IRDLENEAAS---VLNT---------MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
RD++ + + +LN+ M ++ PD Y +I +C ++ K Y ++
Sbjct: 663 RRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALF 721
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y ++ YC E +A+ + + M + PD +VT + L++ ++
Sbjct: 636 FTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPD--------VVTYSVLLN-------SD 680
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
L++ R M + PD V +T +++ + + +L+K Y L +M +++ L
Sbjct: 681 PELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL 740
Query: 123 GDVYWSLMGKQGGLL----DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYD 178
+ + ++ D YT LI+ C G++ +AK + D++ G + Y
Sbjct: 741 KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYT 800
Query: 179 VLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFT-SLVELVKGFR 237
LI+ K +EAK + ++ + + LI C N F V+LVK
Sbjct: 801 ALIACCCKMGYLKEAKMIFDRMIESGVKPD--VVPYTALIAGCCRNGFVLKAVKLVKEML 858
Query: 238 IRDLENEAASV 248
+ ++ AS+
Sbjct: 859 EKGIKPTKASL 869
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y + L+ C G +A + + M K F P+L +L++G G+
Sbjct: 203 YVFGCLLDALCKNGSVKEASKVFEDMREK---------FPPNLRYFTSLLYGWCREGKLM 253
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNM----LAI 118
EA E+L M E GL PD V FT ++SG+ G++ AYDL +M + N+ + I
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 119 QPL--------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
Q L + M + G D V YT+LI+ +C G + K ++LD++ G
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
+ V Y ++ +KK + +E +++ + C
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 131/304 (43%), Gaps = 43/304 (14%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
+C KGE +KA H ++ +GF +V+CN ++ GL + E A +L +
Sbjct: 228 FC-KGEVTKALDFHRLVMERGF--------RVGIVSCNKVLKGLSV-DQIEVASRLLSLV 277
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL---------- 121
+ G P+ V+F +++GF + GE+ +A+DL M++ +++A L
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 122 -SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
G +S +G LD V ++S I+ Y G++ A + + G V Y +L
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE---NCSNNE-----FTSLVE- 231
I GL + R EA M ++ S +T+ +LI+ C N + +++
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPS--IVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 232 -----------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
LV G + L A ML + + + V+N LI CR + D+A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 281 YDMY 284
++
Sbjct: 516 LKVF 519
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
A AY L+ +C + + + D M + S + CN +IH L R
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQR--------NKISADIAVCNVVIHLLFKCHRI 617
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFF---RIGELRKAYDLKLEMDEMMQSNNMLAI 118
E+A + + E + PD V++ ++ G+ R+ E + ++L L++ + L I
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL-LKVTPFGPNTVTLTI 676
Query: 119 --------QPLSGDV-YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
+ G + +S+M ++G + V Y L++ + ++ + L +E+ G
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKML 197
V Y ++I GL K+ R EA +
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 126/308 (40%), Gaps = 48/308 (15%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
Y G+ + A ++ +M+ +G SP++VT LI GL GR EA + +
Sbjct: 366 YVKSGDLATASVVYKRMLCQGI--------SPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV------ 125
+ G+ P V++++++ GF + G LR + L +M +M +++ L +
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 126 -----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
+ M Q L+ V + SLI+ +C +A + + +G + +
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 181 ISGLDKKARTQEAK-------KMLL--------SLVYHLCTSSWPTL---TFDTLIENCS 222
+ + R +EA KM L +L+ C PT+ FD + N
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Query: 223 NNEF----TSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC---RCD 275
+ + + L K RI D A+ N ++ +PD YN +I +C R D
Sbjct: 598 SADIAVCNVVIHLLFKCHRIED----ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 653
Query: 276 NGDKAYDM 283
++ +++
Sbjct: 654 EAERIFEL 661
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 131/304 (43%), Gaps = 43/304 (14%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
+C KGE +KA H ++ +GF +V+CN ++ GL + E A +L +
Sbjct: 228 FC-KGEVTKALDFHRLVMERGF--------RVGIVSCNKVLKGLSV-DQIEVASRLLSLV 277
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL---------- 121
+ G P+ V+F +++GF + GE+ +A+DL M++ +++A L
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 122 -SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
G +S +G LD V ++S I+ Y G++ A + + G V Y +L
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE---NCSNNE-----FTSLVE- 231
I GL + R EA M ++ S +T+ +LI+ C N + +++
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPS--IVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 232 -----------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
LV G + L A ML + + + V+N LI CR + D+A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 281 YDMY 284
++
Sbjct: 516 LKVF 519
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 121/288 (42%), Gaps = 37/288 (12%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
Y G+ + A ++ +M+ +G SP++VT LI GL GR EA + +
Sbjct: 366 YVKSGDLATASVVYKRMLCQGI--------SPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSL-- 129
+ G+ P V++++++ GF + G LR + L +M +M +++ +Y L
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV--------IYGVLVD 469
Query: 130 -MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLD---ELTHFGDVRQSVIYDVLISGLD 185
+ KQG +L + ++ + VV +L+D L F D V + I G+
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF-DEALKVFRLMGIYGIK 528
Query: 186 KKARTQEAKKMLLSLVYHLCTSSWPTL---TFDTLIENCSNNEF----TSLVELVKGFRI 238
T + + C PT+ FD + N + + + L K RI
Sbjct: 529 PDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 588
Query: 239 RDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC---RCDNGDKAYDM 283
D A+ N ++ +PD YN +I +C R D ++ +++
Sbjct: 589 ED----ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFF---RIGEL 96
+ S + CN +IH L R E+A + + E + PD V++ ++ G+ R+ E
Sbjct: 567 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 626
Query: 97 RKAYDLKLEMDEMMQSNNMLAI--------QPLSGDV-YWSLMGKQGGLLDEVNYTSLIN 147
+ ++L L++ + L I + G + +S+M ++G + V Y L++
Sbjct: 627 ERIFEL-LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 685
Query: 148 AYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
+ ++ + L +E+ G V Y ++I GL K+ R EA +
Sbjct: 686 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 125/295 (42%), Gaps = 41/295 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ Y G+ KA + +M + PD + T N LI+G + + A
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPD--------VCTFNILINGYCRSSKFDLA 247
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM----MQSNNMLAIQP 120
L++ R M E G P+ VSF ++ GF G++ + + EM E+ ++ + +
Sbjct: 248 LDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDG 307
Query: 121 LSGD--------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
L + + L+ K+ L E +Y SL+ C + + V+A +++EL G
Sbjct: 308 LCREGRVDDACGLVLDLLNKR-VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 173 QSVIYDVLISGLDKKARTQEA----KKMLLS-----------LVYHLCTSSWPT----LT 213
+ L+ GL K RT++A +KM+ + L+ LC+S T L
Sbjct: 367 CFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLR 426
Query: 214 FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+ +E T V LV GF E ++N ML + PD YN L+
Sbjct: 427 LLASSKGYEPDETTYHV-LVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 101/256 (39%), Gaps = 42/256 (16%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P++ N +++G G ++AL + M + PD +F +++G+ R + A DL
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
EM E +G + V++ +LI + + G++ + +
Sbjct: 251 FREMKE------------------------KGCEPNVVSFNTLIRGFLSSGKIEEGVKMA 286
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL---------------SLVYHLCTS 207
E+ G ++L+ GL ++ R +A ++L SLV LC
Sbjct: 287 YEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGE 346
Query: 208 SWPTLTFDTLIENCSNNE---FTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVY 264
+ + + E + F + LV+G R +A+ + M++ PD +
Sbjct: 347 NKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTF 406
Query: 265 NFLIVEHCRCDNGDKA 280
N L+ + C D+ A
Sbjct: 407 NLLLRDLCSSDHSTDA 422
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 53/300 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C G+ SKA M +I + +S S + N++I G G + A
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKE-------KRYSMSCTSYNSIIDGFVKVGDTDSA 609
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+E R M E G P+ V+FT++++GF + + DL LEM M+S +
Sbjct: 610 VETYREMSENGKSPNVVTFTSLINGFCKSNRM----DLALEMTHEMKSMEL--------- 656
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
LD Y +LI+ +C ++ A TL EL G + +Y+ LISG
Sbjct: 657 -----------KLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF 705
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE--------NCSNNEFTSLVE----- 231
+ A + +V S T+ T+I+ N +++ ++ L++
Sbjct: 706 RNLGKMDAAIDLYKKMVND--GISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 232 -------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
LV G + +A+ +L M + P+ +Y+ +I H R N ++A+ ++
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLH 823
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y +++ + G+ A + +M G SP++VT +LI+G R +
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGK--------SPNVVTFTSLINGFCKSNRMDL 643
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-S 122
ALE+ M M L D ++ A++ GF + +++ AY L E+ E+ N+ L S
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 123 G-----------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
G D+Y ++ G D YT++I+ DG + A L EL G V
Sbjct: 704 GFRNLGKMDAAIDLYKKMVN-DGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762
Query: 172 RQSVIYDVLISGLDKKARTQEAKKML 197
+++ VL++GL KK + +A KML
Sbjct: 763 PDEILHMVLVNGLSKKGQFLKASKML 788
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 91/195 (46%), Gaps = 19/195 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY L+ +C K + A+ + ++ G +P+ + N+LI G G+ +
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPN--------VSVYNSLISGFRNLGKMDA 713
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM-DEMMQSNNMLAIQPLS 122
A+++ + M G+ D ++T ++ G + G + A DL E+ D + + +L + ++
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Query: 123 GDVYWSLMGKQGGLLDEVN----------YTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
G K +L+E+ Y+++I + +G + +A L DE+ G V
Sbjct: 774 GLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVH 833
Query: 173 QSVIYDVLISGLDKK 187
++++L+SG +K
Sbjct: 834 DDTVFNLLVSGRVEK 848
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 51/265 (19%)
Query: 60 RAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQ 119
+ EEA++I R + G PD + F+ V + +L A DL EM L +
Sbjct: 254 KPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREM------RGKLGV- 306
Query: 120 PLSGDVYWSLMG---KQGGL------LDE----------VNYTSLINAYCADGEVVKAKT 160
P S + Y S++ K+G + +DE + TSL+N YC E+ KA
Sbjct: 307 PASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALD 366
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
L + + G V++ V++ K ++A + + + S ++ T+I+
Sbjct: 367 LFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPS--SVLVHTMIQG 424
Query: 221 CS------------NNEFTSLVELVKGFRIRDL---------ENEAASVLNTMLHWNDKP 259
C N+ F S + GF + + A S L M +P
Sbjct: 425 CLKAESPEAALEIFNDSFESWI--AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEP 482
Query: 260 DGAVYNFLIVEHCRCDNGDKAYDMY 284
+ YN +++ HCR N D A ++
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIF 507
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 103/274 (37%), Gaps = 50/274 (18%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
+C +G+ A M KG P+ V + L C + A I M
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCR--------MKNMDLARSIFSEM 510
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMG 131
E GL P+ +++ ++ GFF+ + + A+D+ +M+ ++N A
Sbjct: 511 LEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN----ASNFEA-------------- 552
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI-YDVLISGLDKKART 190
+EV Y ++IN C G+ KAK +L L S Y+ +I G K T
Sbjct: 553 ------NEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT 606
Query: 191 QEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLN 250
A + T+ + EN + + L+ GF + + A + +
Sbjct: 607 DSAVE-----------------TYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649
Query: 251 TMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
M K D Y LI C+ ++ AY ++
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLF 683
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 30/256 (11%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
F P++ +CNA + L GR + AL R M + P+ + V+SG+ R G+L K
Sbjct: 199 FLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGI 258
Query: 101 DLKLEMDEM------MQSNNMLAIQPLSGDVYWSL-----MGKQGGLLDEVNYTSLINAY 149
+L +M+ + + N ++A G + +L MGK G + V + +LI+ +
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTS-S 208
C ++ +A + E+ +V Y+ LI+G ++ + A + +V C
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV---CNGIQ 375
Query: 209 WPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
LT++ LI L K + R +AA + + N P+ + ++ LI
Sbjct: 376 RDILTYNALI-----------FGLCKQAKTR----KAAQFVKELDKENLVPNSSTFSALI 420
Query: 269 VEHCRCDNGDKAYDMY 284
+ C N D+ +++Y
Sbjct: 421 MGQCVRKNADRGFELY 436
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 28/252 (11%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
+ SP+ T N ++ G G+ ++ +E+L+ M +G VS+ +++G G L A
Sbjct: 233 KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLL-----------DEVNYTSLINA 148
LK M + N++ L ++ ++ + + V Y +LIN
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
Y G+ A +++ G R + Y+ LI GL K+A+T++A + +
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV----------- 401
Query: 209 WPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
L + L+ N S + L+ G +R + + +M+ P+ +N L+
Sbjct: 402 -KELDKENLVPNSS-----TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 269 VEHCRCDNGDKA 280
CR ++ D A
Sbjct: 456 SAFCRNEDFDGA 467
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 30/256 (11%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
F P++ +CNA + L GR + AL R M + P+ + V+SG+ R G+L K
Sbjct: 199 FLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGI 258
Query: 101 DLKLEMDEM------MQSNNMLAIQPLSGDVYWSL-----MGKQGGLLDEVNYTSLINAY 149
+L +M+ + + N ++A G + +L MGK G + V + +LI+ +
Sbjct: 259 ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGF 318
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTS-S 208
C ++ +A + E+ +V Y+ LI+G ++ + A + +V C
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV---CNGIQ 375
Query: 209 WPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
LT++ LI L K + R +AA + + N P+ + ++ LI
Sbjct: 376 RDILTYNALI-----------FGLCKQAKTR----KAAQFVKELDKENLVPNSSTFSALI 420
Query: 269 VEHCRCDNGDKAYDMY 284
+ C N D+ +++Y
Sbjct: 421 MGQCVRKNADRGFELY 436
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 28/252 (11%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
+ SP+ T N ++ G G+ ++ +E+L+ M +G VS+ +++G G L A
Sbjct: 233 KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLL-----------DEVNYTSLINA 148
LK M + N++ L ++ ++ + + V Y +LIN
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
Y G+ A +++ G R + Y+ LI GL K+A+T++A + +
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV----------- 401
Query: 209 WPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
L + L+ N S + L+ G +R + + +M+ P+ +N L+
Sbjct: 402 -KELDKENLVPNSS-----TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 269 VEHCRCDNGDKA 280
CR ++ D A
Sbjct: 456 SAFCRNEDFDGA 467
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 102/265 (38%), Gaps = 49/265 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +LM C +A M D+M +KG D P+ ALI G E
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI-----PAY---GALIDGFCKRSNMES 672
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + + E GL P + +++SGF +G + A DL
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL--------------------- 711
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ M K G D YT+LI+ DG ++ A L E+ G V +IY V+++G
Sbjct: 712 ---YKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG 768
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
L KK + + KM + + +T + LI N L + FR+ D
Sbjct: 769 LSKKGQFVKVVKMFEEMKKN-------NVTPNVLIYNAVIAGHYREGNLDEAFRLHD--- 818
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLI 268
ML PDGA ++ L+
Sbjct: 819 -------EMLDKGILPDGATFDILV 836
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 3 YAYVN-LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ YVN + + ++A ++ +M+ G D VT L+ +
Sbjct: 198 FPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVT--------TQLLMRASLREEKP 249
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EALE+L E G PD++ ++ V + +L A L EM E L +
Sbjct: 250 AEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKE-----KKLCVP-- 302
Query: 122 SGDVYWSLM---GKQGGLLDEVNY----------------TSLINAYCADGEVVKAKTLL 162
S + Y S++ KQG + D + TSLI +C + ++V A L
Sbjct: 303 SQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLF 362
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEA----KKM----LLSLVYHLCT--SSW--- 209
D++ G SV + VLI K ++A KKM L V+H+ T W
Sbjct: 363 DKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG 422
Query: 210 -----PTLTFDTLIENCSNNEF---TSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDG 261
FD E N F T L L K + +EA +L+ M P+
Sbjct: 423 QKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKT----DEATELLSKMESRGIGPNV 478
Query: 262 AVYNFLIVEHCRCDNGDKA 280
YN +++ HCR N D A
Sbjct: 479 VSYNNVMLGHCRQKNMDLA 497
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 118/286 (41%), Gaps = 56/286 (19%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
++ ++ Y G+ ++ + D M G +P ++ T N LI+GL + E+A
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP--------TVHTFNGLINGLVEKRQMEKA 643
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+EIL M G+ + ++T ++ G+ +G+ KA++
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE----------------------- 680
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
Y++ + +G +D Y +L+ A C G + A + E++ R S +Y++LI G
Sbjct: 681 -YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGW 739
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIENCSN----NEFTSLVE-------- 231
++ EA ++ + P + T+ + I CS N T +E
Sbjct: 740 ARRGDVWEAADLIQQMKKEGVK---PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVK 796
Query: 232 --------LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
L+KG+ L +A S M KPD AVY+ L+
Sbjct: 797 PNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 116/306 (37%), Gaps = 39/306 (12%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ Y G+ SKA + M +G +L T + +I+G A
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGV--------KHNLKTYSMMINGFVKLKDWANA 538
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL--- 121
+ M + G+ PD + + ++S F +G + +A EM ++ P+
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 122 ---SGDVYWSL----MGKQGGLLDEVN-YTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
SGD+ SL M ++ G + V+ + LIN ++ KA +LDE+T G
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 174 SVIYDVLISGLDKKARTQEAKKMLL---------------SLVYHLCTS----SWPTLTF 214
Y ++ G T +A + +L+ C S S +T
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 215 DTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRC 274
+ N N F + L+ G+ R EAA ++ M KPD Y I +
Sbjct: 719 EMSARNIPRNSFVYNI-LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 275 DNGDKA 280
+ ++A
Sbjct: 778 GDMNRA 783
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 113/282 (40%), Gaps = 52/282 (18%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++G +C G+ ++ + M HK S ++V+ N LI GL G+ +E
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEHKN---------SVNIVSYNILIKGLLENGKIDE 377
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A I R MP G D ++ + G G + KA + E++
Sbjct: 378 ATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES--------------- 422
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
GG LD Y S+I+ C + +A L+ E++ G S + + LI G
Sbjct: 423 ---------SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDLE 242
L + +R EA L + + C + ++++ LI C +F
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPT--VVSYNILICGLCKAGKF---------------- 515
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
EA++ + ML KPD Y+ L+ CR D A +++
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELW 557
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C K EF KA D M +GF PD FS S V I+ L G+ ++
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV---FSYSTV-----INDLAKAGKLDD 202
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL--KLEMDEMMQSN---NMLAI 118
ALE+ M E G+ PD + ++ GF + + + A +L +L D + N + + I
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 119 QPLS--GDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
LS G V W M + D Y+SLI+ C G V KA+++ +EL
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS 322
Query: 172 RQSVIYDVLISGLDKKARTQEA 193
V Y+ ++ G + + +E+
Sbjct: 323 IDVVTYNTMLGGFCRCGKIKES 344
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 108/272 (39%), Gaps = 49/272 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
YAY +++ C K +A ++ +M G E + + CNALI GL R
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHG------VELNSHV--CNALIGGLIRDSRLG 481
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA LR M + G P VS+ ++ G + G+ +A EM E
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE-------------- 527
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
G D Y+ L+ C D ++ A L + G +++++LI
Sbjct: 528 ----------NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIH 577
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
GL + +A ++ ++ + CT++ +T++TL+E F++ D
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTAN--LVTYNTLMEGF--------------FKVGD-S 620
Query: 243 NEAASVLNTMLHWNDKPDGAVYNFLIVEHCRC 274
N A + M +PD YN ++ C C
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTIMKGLCMC 652
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 44/219 (20%)
Query: 24 MHDQMIHKGFLPDFVT---------------------------EFSPSLVTCNALIHGLG 56
++ QM+ GF PD +T FSP T N L+H LG
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 57 FFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQS---- 112
+ AL L M E+G+ P + +T ++ G R G L K +DEM+++
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEAC---KYFLDEMVKAGCRP 357
Query: 113 -----NNMLAIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
M+ +SG++ + M +G L + Y S+I C GE +A LL
Sbjct: 358 DVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLL 417
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
E+ G V+Y L+S L K + EA+K++ +V
Sbjct: 418 KEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMV 456
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 32/191 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+A+ ++G C +G+ ++ + + + MI KG P++ LI G G E
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYTVFENMIRKGS--------KPNVAIYTVLIDGYAKSGSVE 379
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+A+ +L M + G PD V+++ VV+G + G + +A D
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD--------------------- 418
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
Y+ G ++ + Y+SLI+ G V +A+ L +E++ G R S Y+ LI
Sbjct: 419 ---YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 183 GLDKKARTQEA 193
K + EA
Sbjct: 476 AFTKHRKVDEA 486
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 91/231 (39%), Gaps = 40/231 (17%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------EFSPSLVTC- 48
Y L+ Y G A + +MI +GF PD VT E TC
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 49 -----------NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
++LI GLG GR +EA + M E G D+ + A++ F + ++
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 98 KAYDLKLEMDEMMQSNNMLAIQP--LSGDV----------YWSLMGKQGGLLDEVNYTSL 145
+A L M+E + + LSG W +M +G + +L
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
C G+V +A +LDEL G + + D +I+ L K R +EA K+
Sbjct: 545 STGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKL 594
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
P +VT N +I G G+ ++A+E LR M G D +++ ++ + +
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 100 YDLKLEMDE----MMQSNNMLAIQPL-------SGDVYWSLMGKQGGLLDEVNYTSLINA 148
L EMDE + L I L G + M ++G + YT LI+
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSS 208
Y G V A LL + G V Y V+++GL K R +EA +H C
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY-----FHTC--- 423
Query: 209 WPTLTFDTLIENCSNNEFTSLVE-LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFL 267
FD L N + ++SL++ L K R+ +EA + M D YN L
Sbjct: 424 ----RFDGLAIN--SMFYSSLIDGLGKAGRV----DEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 268 I 268
I
Sbjct: 474 I 474
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 43 PSLVTCNALIHGL---GFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
P+L T N L++GL F AE E+ M + PD V++ ++ G+ + G+ +KA
Sbjct: 220 PTLYTYNFLMNGLVSAMFVDSAERVFEV---MESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 100 ----YDLKLEMDEMMQSNNMLAIQPLSGD-------VYWSLMGKQGGLLDEVNYTSLINA 148
D++ E + M IQ D + M ++G + ++ +I
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 149 YCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
C +G++ + T+ + + G IY VLI G K ++A ++L ++
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 108/271 (39%), Gaps = 52/271 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFF-GRAE 62
AYV ++ ++ + + AF + M G LP P++ + N LI L G +
Sbjct: 123 AYVTVLAILVEENQLNLAFKFYKNMREIG-LP-------PTVASLNVLIKALCRNDGTVD 174
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
L+I MP+ G PD+ ++ ++SG R G + +A L EM E + +
Sbjct: 175 AGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV------- 227
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
V YTSLIN C V +A L+E+ G Y L+
Sbjct: 228 -----------------VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDL 241
GL K R+ +A ++ ++ C + +T+ TLI C + VEL+ ++ L
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNM--VTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
KPD +Y +I C
Sbjct: 329 ----------------KPDAGLYGKVISGFC 343
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 31/216 (14%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +LM C G +A + + M+ +G P++VT LI GL + +
Sbjct: 263 FTYSSLMDGLCKDGRSLQAMELFEMMMARGC--------RPNMVTYTTLITGLCKEQKIQ 314
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMM------------ 110
EA+E+L M GL PD + V+SGF I + R+A + +DEM+
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANF---LDEMILGGITPNRLTWN 371
Query: 111 ----QSNNML----AIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
SN ++ A P + M +G ++ SL+ C GE KA L+
Sbjct: 372 IHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLV 431
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLL 198
DE+ G + + +LI K EA LL
Sbjct: 432 DEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLL 467
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+Y Y L+ C G +A + +M+ K + +P++VT +LI+GL
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEK--------DCAPTVVTYTSLINGLCGSKNV 243
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EA+ L M G+ P+ ++++++ G + G +A +E+ EMM +
Sbjct: 244 DEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQA----MELFEMMMA--------- 290
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+G + V YT+LI C + ++ +A LLD + G + +Y +I
Sbjct: 291 -----------RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Query: 182 SGLDKKARTQEAKKMLLSLV 201
SG ++ +EA L ++
Sbjct: 340 SGFCAISKFREAANFLDEMI 359
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 131/320 (40%), Gaps = 56/320 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y NL+ YC G +AF + + M LPD L T N LI+GL G E
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD--------LCTYNILINGLCNAGSMRE 328
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQS--NNMLAIQPL 121
LE++ M + L PD V++ ++ G F +G L LE ++M+ N+ + +
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDGCFELG-------LSLEARKLMEQMENDGVKANQV 381
Query: 122 SGDVYWSLMGKQ-----------------GGLLDEVNYTSLINAYCADGEVVKAKTLLDE 164
+ ++ + K+ G D V Y +LI AY G++ A ++ E
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 165 LTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNN 224
+ G ++ + ++ L K+ + EA +L S H +T+ TLI
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNS--AHKRGFIVDEVTYGTLIMGFFRE 499
Query: 225 E-FTSLVEL---VKGFRIRDLENEAASVLNTMLHWNDK----------------PDGAVY 264
E +E+ +K +I + S++ + H PD + +
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 265 NFLIVEHCRCDNGDKAYDMY 284
N +I+ +C+ +KA++ Y
Sbjct: 560 NSIILGYCKEGRVEKAFEFY 579
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ + + + KA M D+M + +P++ T N+LI GL G+ E
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKK--------VKITPTVSTFNSLIGGLCHHGKTEL 539
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLE-MDEMMQSNNMLAIQPLS 122
A+E + E GL PD +F +++ G+ + G + KA++ E + + +N L+
Sbjct: 540 AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 123 GDVYWSLMGK---------QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
G + K + +D V Y ++I+A+C D ++ +A LL E+ G
Sbjct: 600 GLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 174 SVIYDVLISGLDKKARTQEAKKML 197
Y+ IS L + + E ++L
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELL 683
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 23/251 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ Y G+ S A M +M KG + +T N ++ L + +E
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGI--------KMNTITLNTILDALCKERKLDE 469
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +L + G D V++ ++ GFFR ++ KA ++ EM ++ + + L G
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 124 DV-----------YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+ + + + G L D+ + S+I YC +G V KA +E
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVE 231
+ ++L++GL K+ T++A +L+ T+T++T+I C + + +
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEE---REVDTVTYNTMISAFCKDKKLKEAYD 646
Query: 232 LVKGFRIRDLE 242
L+ + LE
Sbjct: 647 LLSEMEEKGLE 657
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P+ VT N L++G G +EA +I+ M + + PD ++ +++G G +R+ +L
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
MD M L +QP D V Y +LI+ G ++A+ L+
Sbjct: 333 ---MDAMKS----LKLQP-----------------DVVTYNTLIDGCFELGLSLEARKLM 368
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
+++ + G V +++ + L K+ + + + + LV + S +T+ TLI+
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV-DMHGFSPDIVTYHTLIK 424
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 33/232 (14%)
Query: 9 MGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA---EEAL 65
+ Y +G+ A + +MI + P+L+TCN L+ GL + + A
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIR--------LKLKPNLLTCNTLLIGLVRYPSSFSISSAR 189
Query: 66 EILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDV 125
E+ M ++G+ + +F +V+G+ G+L A L M E M S + ++ +
Sbjct: 190 EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA----LGMLERMVSEFKVNPDNVTYNT 245
Query: 126 YWSLMGKQGGLLD----------------EVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
M K+G L D V Y +L+ YC G + +A +++ +
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENC 221
+ Y++LI+GL +E +++ ++ +T++TLI+ C
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAM--KSLKLQPDVVTYNTLIDGC 355
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 37/289 (12%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+ YC K +A + D+M G +P++VT N+ IHG GR
Sbjct: 239 FTYNTLISVYCKKSMHFEALSVQDRMERSGV--------APNIVTYNSFIHGFSREGRMR 290
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE------MMQSNNML 116
EA + R + + + + V++T ++ G+ R+ ++ +A L+ M+ ++ N++L
Sbjct: 291 EATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSIL 349
Query: 117 AIQPLSGDVYWS--LMGKQGGLL---DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
G + + L+ + G D + +LINAYC ++V A + ++ G
Sbjct: 350 RKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLK 409
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
Y LI G K + AK+ L S++ + + T ++
Sbjct: 410 LDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW----------------- 452
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
LV GF ++ ++E +L D A+Y LI C+ + D A
Sbjct: 453 LVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYA 501
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 34/251 (13%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
N L+H G E+A ++L M E G+FPD ++ ++S + + +A ++ M+
Sbjct: 207 NVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMER 266
Query: 109 MMQSNNMLAIQP-LSGDVYWSLMGKQGGLLDE---------VNYTSLINAYCADGEVVKA 158
+ N++ + G M + L E V YT+LI+ YC ++ +A
Sbjct: 267 SGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEA 326
Query: 159 KTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI 218
L + + G V Y+ ++ L + R +EA ++L + +T +TLI
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPD--NITCNTLI 384
Query: 219 EN-CSNNEFTSLVE-------------------LVKGF-RIRDLENEAASVLNTMLHWND 257
C + S V+ L+ GF ++ +LEN A L +M+
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELEN-AKEELFSMIEKGF 443
Query: 258 KPDGAVYNFLI 268
P A Y++L+
Sbjct: 444 SPGYATYSWLV 454
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 124/322 (38%), Gaps = 71/322 (22%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFV-----------------------TE 40
+ LM C +G +A + D+M+ +G P T
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETH 71
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
+V NA+I L G A + M + G+FPD ++++ ++ F R G A
Sbjct: 72 IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAE 131
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
L +M E I P D V +++LINA +G+V +A+
Sbjct: 132 QLLRDMIERQ-------INP-----------------DVVTFSALINALVKEGKVSEAEE 167
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN 220
+ ++ G ++ Y+ +I G K+ R +AK+ML S+ C S +TF TLI
Sbjct: 168 IYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC--SPDVVTFSTLING 225
Query: 221 -CSNNEFTSLVE-------------------LVKGF-RIRDLENEAASVLNTMLHWNDKP 259
C + +E L+ GF ++ DL+ A +LN M+ P
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD-AAQDLLNVMISSGVAP 284
Query: 260 DGAVYNFLIVEHCRCDNGDKAY 281
+ + ++ C KA+
Sbjct: 285 NYITFQSMLASLCSKKELRKAF 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ +C G ++ A + MI + PD VT FS ALI+ L G+ E
Sbjct: 113 TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVT-FS-------ALINALVKEGKVSE 164
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A EI M G+FP T+++ +++ GF + L A + M S +++ L
Sbjct: 165 AEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLIN 224
Query: 122 ---------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+G + M ++G + + V YT+LI+ +C G++ A+ LL+ + G
Sbjct: 225 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAP 284
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSL 200
+ + +++ L K ++A +L L
Sbjct: 285 NYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 39 TEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRK 98
T P +VT L++GL GR +AL ++ M E G P + +++G ++G+
Sbjct: 4 TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTES 59
Query: 99 AYDLKLEMDEMMQSNNMLA----IQPLSGDVY-------WSLMGKQGGLLDEVNYTSLIN 147
A +L +M+E +++ I L D + ++ M +G D + Y+ +I+
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 148 AYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTS 207
++C G A+ LL ++ V + LI+ L K+ + EA+++ ++
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR---G 176
Query: 208 SWPT-LTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNF 266
+PT +T++++I+ GF +D N+A +L++M + PD ++
Sbjct: 177 IFPTTITYNSMID---------------GFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 267 LIVEHC---RCDNG 277
LI +C R DNG
Sbjct: 222 LINGYCKAKRVDNG 235
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 38/282 (13%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
YV M Y KG+ +A ++ ++M DF + P++ + NA++ L G ++
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERM-------DFY-DCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++ M + G+ PD SFT + F + A L M N++A + G
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 124 DVY--------WSLMGK---QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
Y + L GK G L + L+ C G+V + + LLD++ G +
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVE 231
Y++ I GL ++ A +M+ L+ +T++ LI C N++F
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ--GPKPDVITYNNLIYGLCKNSKF----- 302
Query: 232 LVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
EA L M++ +PD YN LI +C+
Sbjct: 303 -----------QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 118/283 (41%), Gaps = 51/283 (18%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +L+ C +GE ++A + ++ + KG P+++ N LI GL G
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGI--------KPNVILYNTLIKGLSNQGMIL 408
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EA ++ M E GL P+ +F +V+G ++G + A
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA----------------------- 445
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
D +M +G D + LI+ Y ++ A +LD + G Y+ L++
Sbjct: 446 -DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTSLVELVKGFRIRDL 241
GL K ++ ++ + T+ T++E C+ N FT + L R R L
Sbjct: 505 GLCKTSKFEDVME-----------------TYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ EA +L M + + PD + LI C+ + D AY ++
Sbjct: 548 D-EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 113/290 (38%), Gaps = 50/290 (17%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C +GE A M +I +G PD ++T N LI+GL + +EA L M
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPD--------VITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
GL PD+ ++ +++G+ + G ++ A + + GD ++
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLA-------------------ERIVGDAVFN---- 350
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
G + D+ Y SLI+ C +GE +A L +E G ++Y+ LI GL + E
Sbjct: 351 -GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 193 AKKMLLS---------------LVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE---LVK 234
A ++ LV LC + + S F + L+
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
G+ + A +L+ ML PD YN L+ C+ + + Y
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 119/303 (39%), Gaps = 51/303 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVT-CNALIHGLGFFGR 60
++Y +M D G F +A ++ +M +G PD V F+ + + C R
Sbjct: 111 VFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD-VYSFTIRMKSFCKT--------SR 161
Query: 61 AEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQS-------- 112
AL +L M G + V++ VV GF+ + Y+L +M+ S
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYEL---FGKMLASGVSLCLST 218
Query: 113 -NNMLAIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELT 166
N +L + GDV + K+G L + Y I C GE+ A ++ L
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 167 HFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYH-LCTSSWPTLTFDTLIENCSNNE 225
G + Y+ LI GL K ++ QEA+ L +V L S+ T++TLI
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY---TYNTLIAGYCKGG 335
Query: 226 FTSLVELVKG-----------FRIRDL---------ENEAASVLNTMLHWNDKPDGAVYN 265
L E + G F R L N A ++ N L KP+ +YN
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 266 FLI 268
LI
Sbjct: 396 TLI 398
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 97/261 (37%), Gaps = 48/261 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y Y +L+ C +F + M+ KG +P+L T N L+ L + +
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC--------APNLFTFNILLESLCRYRKL 547
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EAL +L M + PD V+F ++ GF + G+L AY L +M+E + ++
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS------- 600
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
Y +I+A+ V A+ L E+ Y +++
Sbjct: 601 ----------------STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
G K K LL ++EN T+L ++ + D
Sbjct: 645 DGFCKTGNVNLGYKFLLE-----------------MMENGFIPSLTTLGRVINCLCVEDR 687
Query: 242 ENEAASVLNTMLHWNDKPDGA 262
EAA +++ M+ P+
Sbjct: 688 VYEAAGIIHRMVQKGLVPEAV 708
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++ +C G +S A + MI K PD VT FS ALI+ + E
Sbjct: 47 TYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVT-FS-------ALINAFVKERKVSE 98
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A EI + M +FP T+++ +++ GF + + A + M S +++ L
Sbjct: 99 AEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLIN 158
Query: 122 ---------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+G + M ++G + + V YT+LI+ +C G++ A+ LL+E+ G
Sbjct: 159 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 218
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSL 200
+ + +++GL K ++A +L L
Sbjct: 219 DYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 110/270 (40%), Gaps = 51/270 (18%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C G A ++ +M KG P+ ++T N +I GR +A ++LR M
Sbjct: 21 CKDGNHINAQNLFTEMHEKGIFPN--------VLTYNCMIDSFCHSGRWSDADQLLRHMI 72
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
E + PD V+F+A+++ F + ++ +A ++ EM + WS+
Sbjct: 73 EKQINPDIVTFSALINAFVKERKVSEAEEIYKEM------------------LRWSIFPT 114
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
+ Y S+I+ +C V AK +LD + G V + LI+G K R
Sbjct: 115 T------ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 168
Query: 193 AKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF-RIRDLENEAASVLNT 251
++ + H T+T+ TLI GF ++ DL+ A +LN
Sbjct: 169 GMEIFCEM--HRRGIVANTVTYTTLIH---------------GFCQVGDLD-AAQDLLNE 210
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAY 281
M+ PD ++ ++ C KA+
Sbjct: 211 MISCGVAPDYITFHCMLAGLCSKKELRKAF 240
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 28/253 (11%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ YC E+ A + QM +G PD +VT LIHGL G ++
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD--------IVTYGILIHGLVVSGHMDD 433
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSN---------N 114
A+ + + + G+ PD + ++SG + G A KL EM+ N
Sbjct: 434 AVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA---KLLFSEMLDRNILPDAYVYAT 490
Query: 115 MLAIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
++ SGD +SL ++G +D V++ ++I +C G + +A ++ +
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTS 228
V Y +I G K+ A K+ + + C + +T+ +LI C +F
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN--VVTYTSLINGFCCQGDFKM 608
Query: 229 LVELVKGFRIRDL 241
E K ++RDL
Sbjct: 609 AEETFKEMQLRDL 621
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 76/191 (39%), Gaps = 32/191 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
AY Y L+ + G+F +A + + KG D V NA+I G G
Sbjct: 485 AYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH--------NAMIKGFCRSGML 536
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EAL + M E L PD +++ ++ G+ + ++ A + M++ N+
Sbjct: 537 DEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNV------ 590
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
V YTSLIN +C G+ A+ E+ V V Y LI
Sbjct: 591 ------------------VTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Query: 182 SGLDKKARTQE 192
L K++ T E
Sbjct: 633 RSLAKESSTLE 643
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 107/284 (37%), Gaps = 40/284 (14%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y+ L+ C++G+ + + KG +P+ +V N +I G G E
Sbjct: 206 YSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPN--------IVFYNTIIGGYCKLGDIE 257
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQS------NNML 116
A + + + G P +F +++GF + G+ + L E+ E NN++
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317
Query: 117 AIQPLSG-------DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
+ G + W + D Y LIN C +G+ A LDE + G
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKP--DVATYNILINRLCKEGKKEVAVGFLDEASKKG 375
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSL 229
+ ++ Y LI K A K+LL + C +T+ LI
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD--IVTYGILIH---------- 423
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
G + ++A ++ ++ PD A+YN L+ C+
Sbjct: 424 -----GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 112/280 (40%), Gaps = 49/280 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC G K+F + ++M PSL+T N L+ GL G E+
Sbjct: 251 TYNTLIDGYCKAGNPEKSFKVRERMK--------ADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A +L+ M ++G PD +F+ + G+ S+N A L
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGY---------------------SSNEKAEAALG- 340
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
VY + + G ++ + L+NA C +G++ KA+ +L G V VIY+ +I G
Sbjct: 341 -VYETAV-DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG 398
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
+K A+ + ++ + D L NC F L E +EN
Sbjct: 399 YCRKGDLVGARMKIEAM-------EKQGMKPDHLAYNCLIRRFCELGE---------MEN 442
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
A +N M P YN LI + R DK +D+
Sbjct: 443 -AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDI 481
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 130/295 (44%), Gaps = 48/295 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY L+ +C+ GE A ++M KG SPS+ T N LI G G ++
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGV--------SPSVETYNILIGGYGRKYEFDK 477
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSN-----NMLAI 118
+IL+ M + G P+ VS+ +++ + +L +A +K +M++ S NML
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 119 QPLS-GDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
S G + + M K+G L+ V Y +LI+ G++ +A+ LL E++ G
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW-PTL-TFDTLIENCSNNEFTSLV 230
Y+ LISG Q ++L + S PTL T+ LI C+ E L
Sbjct: 598 DVFTYNSLISGYGFAGNVQRC----IALYEEMKRSGIKPTLKTYHLLISLCT-KEGIELT 652
Query: 231 ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGD--KAYDM 283
E + G + KPD VYN ++ HC +GD KA+++
Sbjct: 653 ERLFG------------------EMSLKPDLLVYNGVL--HCYAVHGDMEKAFNL 687
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 29/207 (14%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ C KG+ AF +M+ KG +LVT N LI GL G+ EA
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGI--------ELNLVTYNTLIDGLSMTGKLSEA 583
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL--S 122
++L + GL PD ++ +++SG+ G +++ L +EM +S I+P +
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL---YEEMKRS----GIKPTLKT 636
Query: 123 GDVYWSLMGKQGGLLDE------------VNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+ SL K+G L E + Y +++ Y G++ KA L ++
Sbjct: 637 YHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKML 197
Y+ LI G K + E + ++
Sbjct: 697 GLDKTTYNSLILGQLKVGKLCEVRSLI 723
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 111/284 (39%), Gaps = 57/284 (20%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ YC KG+ A + M +G PD + N LI G E A
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA--------YNCLIRRFCELGEMENA 443
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ + M G+ P ++ ++ G+ R E K +D+ EM++
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED---------------- 487
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
G + + V+Y +LIN C ++++A+ + ++ G + IY++LI G
Sbjct: 488 --------NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 185 DKKARTQEA----KKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
K + ++A K+ML + +T++TLI+ G +
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGI------ELNLVTYNTLID---------------GLSMTG 578
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+EA +L + KPD YN LI + N + +Y
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 32/268 (11%)
Query: 27 QMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAV 86
+ ++ L D V SP + T N L++G G EA + + + + G PD ++T+
Sbjct: 140 KRLYTEMLEDLV---SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSF 196
Query: 87 VSGFFRIGELRKAYDLKLEMDEM-MQSNNMLAIQPLSG-------DVYWSLMGK---QGG 135
++G R E+ A+ + EM + N + Q + G D SL+ K
Sbjct: 197 ITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNC 256
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
+ YT LI+A C G+ +A L +++ G +Y VLI EA
Sbjct: 257 CPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASG 316
Query: 196 MLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHW 255
+L + ++EN + L+KGF +++ ++A +L+ ML
Sbjct: 317 LL-----------------EHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQ 358
Query: 256 NDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
N PD YN LI C N D AY +
Sbjct: 359 NLVPDLITYNTLIAGQCSSGNLDSAYRL 386
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 19/216 (8%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y+Y ++ C A +M +G SP+LVT N + G G
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQDRGI--------SPNLVTFNTFLSGYSVRGDV 476
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
++ +L + G PD ++F+ +++ R E++ A+D EM E N + L
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNIL 536
Query: 122 ------SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+GD S+ M + G D Y + I ++C +V KA+ LL + G
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCT 206
+ Y LI L + R EA++M S+ H C
Sbjct: 597 KPDNFTYSTLIKALSESGRESEAREMFSSIERHGCV 632
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 99/247 (40%), Gaps = 28/247 (11%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFR---IGELRKAYDLKLE 105
+A+++ L A+E + LR + E G PD+ +F A +S + + E + +D +
Sbjct: 324 DAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVS 383
Query: 106 MDEMMQSNNMLA-IQPL-------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVK 157
N L +Q L GD Y MG G L +Y ++I+ C +
Sbjct: 384 RGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIEN 443
Query: 158 AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTL 217
A L E+ G V ++ +SG + ++ +L L+ H P + +L
Sbjct: 444 AAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH---GFKPDVITFSL 500
Query: 218 IENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG 277
I NC L + I+D A ML W +P+ YN LI C +
Sbjct: 501 IINC----------LCRAKEIKD----AFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT 546
Query: 278 DKAYDMY 284
D++ ++
Sbjct: 547 DRSVKLF 553
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y ++ C G A + D M+ F +P VT N ++ GL GRAE
Sbjct: 448 YTLNTVINGLCKMGRVDDAMKVLDDMMTGKFC-------APDAVTLNTVMCGLLAQGRAE 500
Query: 63 EALEIL-RGMPEMGLFPDTVSFTAVVSGFFRI----------GELRKA------YDLKLE 105
EAL++L R MPE + P V++ AV+ G F++ G+L KA +
Sbjct: 501 EALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAII 560
Query: 106 MDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
+D + +N + + DV W G D Y + + C G + A L +L
Sbjct: 561 IDGLCVTNKVDMAKKFWDDVIWP-----SGRHDAFVYAAFLKGLCQSGYLSDACHFLYDL 615
Query: 166 THFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
G + V Y+ +I+ + +EA ++L
Sbjct: 616 ADSGAIPNVVCYNTVIAECSRSGLKREAYQIL 647
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 40/243 (16%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLF--PDTVSFTAVVSGFFRIGELRKAY 100
P T N +I+GL GR ++A+++L M G F PD V+ V+ G G +A
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDM-MTGKFCAPDAVTLNTVMCGLLAQGRAEEAL 503
Query: 101 DLKLEMDEMMQSNNM--------LAIQPL----SGDVYWSLMG---KQGGLLDEVNYTSL 145
D+ ++ +M N + I+ L GD S+ G K D Y +
Sbjct: 504 DV---LNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAII 560
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
I+ C +V AK D++ + +Y + GL + +A L L
Sbjct: 561 IDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLAD--- 617
Query: 206 TSSWPTLT-FDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVY 264
+ + P + ++T+I CS + L+ EA +L M PD +
Sbjct: 618 SGAIPNVVCYNTVIAECSRS---------------GLKREAYQILEEMRKNGQAPDAVTW 662
Query: 265 NFL 267
L
Sbjct: 663 RIL 665
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 29/140 (20%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPD-----------------------------FVTEFSP 43
CD G F +A + GF+PD F EF P
Sbjct: 101 CDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVP 160
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
SL N L++ L R +A +++ M G PD V+FT ++ G+ I EL A+ +
Sbjct: 161 SLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVF 220
Query: 104 LEMDEMMQSNNMLAIQPLSG 123
EM N L + L G
Sbjct: 221 DEMRVCGIRPNSLTLSVLIG 240
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 39/244 (15%)
Query: 42 SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD 101
+P T N LI+G +EA I + M PD V++ ++ G R G+++ A++
Sbjct: 206 TPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHN 265
Query: 102 LKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTL 161
+ + M++ + DV+ ++ V+YT+L+ YC E+ +A +
Sbjct: 266 V---LSGMLKK---------ATDVHPNV----------VSYTTLVRGYCMKQEIDEAVLV 303
Query: 162 LDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE-N 220
++ G +V Y+ LI GL + R E K +L+ T + TF+ LI+ +
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAH 363
Query: 221 CSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
C + A V ML+ PD A Y+ LI C + D+A
Sbjct: 364 CDAGHL----------------DAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRA 407
Query: 281 YDMY 284
++
Sbjct: 408 ETLF 411
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 49 NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE 108
N+LI G G +E++++ + M +MG+ P ++F +++S + G A+DL DE
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL---FDE 198
Query: 109 MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
M ++ + P D + +LIN +C + V +A + ++ +
Sbjct: 199 MRRT---YGVTP-----------------DSYTFNTLINGFCKNSMVDEAFRIFKDMELY 238
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTS 228
V Y+ +I GL + + + A +L ++ T P + S
Sbjct: 239 HCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKK-ATDVHPNV--------------VS 283
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
LV+G+ ++ +EA V + ML KP+ YN LI
Sbjct: 284 YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 115/274 (41%), Gaps = 33/274 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C +A + +QM +G D + N LI GL GR +EA E+
Sbjct: 335 LINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 392
Query: 68 LRGMP-EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD-- 124
L M E P+ V++ ++ G+ R G+L A ++ M E N++ + + G
Sbjct: 393 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 125 ---------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
V++ M K+G + V Y +LI+A C+ V KA +++ G +
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE-NCSNNEFTSLVELVK 234
IY LISGL + R +A +++ L S L ++ LI C N + E+
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKL--KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM-- 568
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+ D+E E KPD YN LI
Sbjct: 569 ---LTDMEKEGK-----------KPDSITYNTLI 588
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 42/213 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY L+G +CDK K + M M +G PD +T N LI FFG+ ++
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT--------YNTLI---SFFGKHKD 596
Query: 64 ALEILRGMPEM---GLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP 120
+ R M +M GL P ++ AV+ + +GEL +A LKL D + S + P
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA--LKLFKDMGLHSK----VNP 650
Query: 121 LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDV 179
+ V Y LINA+ G +A +L +E+ VR +V Y+
Sbjct: 651 -----------------NTVIYNILINAFSKLGNFGQALSLKEEM-KMKMVRPNVETYNA 692
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCT---SSW 209
L L++K + + K++ +V HL S W
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEHLVNQIRSQW 725
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 107/276 (38%), Gaps = 37/276 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+G Y G+ KA + ++M G SP++ T LI GLG GR +EA
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGC--------SPTVYTYTELIKGLGKAGRVDEA 322
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
+ M GL PD V +++ ++G + + ++ EM + +++ +
Sbjct: 323 YGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKA 382
Query: 125 VYWS------------LMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
++ S M E Y+ LI+ YC V KA LL+E+ G
Sbjct: 383 LFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 442
Query: 173 QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVEL 232
Y LI+ L K R + A ++ F L EN N +
Sbjct: 443 CPAAYCSLINALGKAKRYEAANEL-----------------FKELKENFGNVSSRVYAVM 485
Query: 233 VKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+K F +EA + N M + PD YN L+
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 25/152 (16%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMG-LFPDTVSFTAVVSGFFRIGELRKAYD 101
P+ T N++I L G+ E+ E+ M G FPDT++++A++S + ++G A
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 102 LKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTL 161
L DEM + +QP E YT+L+ Y G+V KA L
Sbjct: 255 L---FDEMKDN----CMQPT-----------------EKIYTTLLGIYFKVGKVEKALDL 290
Query: 162 LDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
+E+ G Y LI GL K R EA
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEA 322
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y L+ YC KA + ++M KGF P P+ C +LI+ LG R E
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP------CPA-AYC-SLINALGKAKRYE 461
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
A E+ + + E + + ++ F + G+L +A DL EM ++ A L
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Query: 122 SGDVYWSLMGKQGGLLDEV----------NYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
SG V ++ + LL ++ ++ ++N + G +A + + + H G
Sbjct: 522 SGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIK 581
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSL 200
V Y+ L+ +EA +M+ +
Sbjct: 582 PDGVTYNTLLGCFAHAGMFEEAARMMREM 610
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 109/276 (39%), Gaps = 49/276 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y LM +C + S A+ + +M+ + +PD + + LI G G+
Sbjct: 192 SYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPD--------VDSYKILIQGFCRKGQVNG 243
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+E+L M G PD +S+T +++ R +LR+AY L
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL--------------------- 282
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
M +G D V+Y ++I +C + + A+ +LD++ G SV Y LI G
Sbjct: 283 ---LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 184 LDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLEN 243
L + E KK L ++ + + + NC LVKGF
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFS-------VSNC----------LVKGFCSFGKVE 382
Query: 244 EAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDK 279
EA V+ ++ + + +I C D +K
Sbjct: 383 EACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 418
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 44/238 (18%)
Query: 41 FSPSLVTCNALIHGL-GFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
F+P N ++ L G ++A E+ + G+ P+T S+ ++ F +L A
Sbjct: 150 FTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIA 209
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAK 159
Y L +M L DV + D +Y LI +C G+V A
Sbjct: 210 YQLFGKM--------------LERDV----------VPDVDSYKILIQGFCRKGQVNGAM 245
Query: 160 TLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE 219
LLD++ + G V + Y L++ L +K + +EA K+L + C
Sbjct: 246 ELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC-------------- 291
Query: 220 NCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG 277
N + ++ GF D +A VL+ ML P+ Y LI CD G
Sbjct: 292 ---NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI--GGLCDQG 344
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 115/274 (41%), Gaps = 33/274 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C +A + +QM +G D + N LI GL GR +EA E+
Sbjct: 335 LINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 392
Query: 68 LRGMP-EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD-- 124
L M E P+ V++ ++ G+ R G+L A ++ M E N++ + + G
Sbjct: 393 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 125 ---------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
V++ M K+G + V Y +LI+A C+ V KA +++ G +
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE-NCSNNEFTSLVELVK 234
IY LISGL + R +A +++ L S L ++ LI C N + E+
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKL--KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM-- 568
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+ D+E E KPD YN LI
Sbjct: 569 ---LTDMEKEGK-----------KPDSITYNTLI 588
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 42/240 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY L+G +CDK K + M M +G PD +T N LI FFG+ ++
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT--------YNTLI---SFFGKHKD 596
Query: 64 ALEILRGMPEM---GLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP 120
+ R M +M GL P ++ AV+ + +GEL +A LKL D + S + P
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA--LKLFKDMGLHSK----VNP 650
Query: 121 LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDV 179
+ V Y LINA+ G +A +L +E+ VR +V Y+
Sbjct: 651 -----------------NTVIYNILINAFSKLGNFGQALSLKEEM-KMKMVRPNVETYNA 692
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS-NNEFTSLVELVKGFRI 238
L L++K + + K++ +V C + +T + L+E S ++E L + ++G+ +
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPN--QITMEILMERLSGSDELVKLRKFMQGYSV 750
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 121/294 (41%), Gaps = 47/294 (15%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ YC +G +AF+++ M + +PD LVT +LI GL GR E
Sbjct: 273 TYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPD--------LVTYTSLIKGLCKDGRVRE 324
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + M + G+ PD +S+ ++ + + G ++++ L + EM+ N + +
Sbjct: 325 AHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKL---LHEML--GNSVVPDRFTC 379
Query: 124 DVYWSLMGKQGGLLDEVNYTS----------------LINAYCADGEVVKAKTLLDELTH 167
V ++G LL VN+ LI + C +G+ AK LLD +
Sbjct: 380 KVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIE 439
Query: 168 F-GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEF 226
G + Y+ LI L + +EA ++L T+ LI C
Sbjct: 440 EEGHEAKPETYNNLIESLSRCDAIEEA--LVLKGKLKNQNQVLDAKTYRALI-GC----- 491
Query: 227 TSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKA 280
L + R R EA S++ M KPD + L+ +C+ + DKA
Sbjct: 492 -----LCRIGRNR----EAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKA 536
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 32/199 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
Y + L +C+ F + ++M +GF PD LVT N L+ GR
Sbjct: 236 TYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPD--------LVTYNTLVSSYCRRGRL 287
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EA + + M + PD V++T+++ G + G +R+A+
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQT------------------- 328
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+ M +G D ++Y +LI AYC +G + ++K LL E+ V V++
Sbjct: 329 -----FHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIV 383
Query: 182 SGLDKKARTQEAKKMLLSL 200
G ++ R A ++ L
Sbjct: 384 EGFVREGRLLSAVNFVVEL 402
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ Y G + F + +++ GF S S+VTCN L++GL E+ ++
Sbjct: 172 LVKGYLKLGLVEEGFRVFREVLDSGF--------SVSVVTCNHLLNGLLKLDLMEDCWQV 223
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE------MMQSNNMLAIQPL 121
M +G+ P+T +F + + F R+ D +M+E ++ N +++
Sbjct: 224 YSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCR 283
Query: 122 SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
G + + +M ++ + D V YTSLI C DG V +A + G +
Sbjct: 284 RGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMS 343
Query: 177 YDVLISGLDKKARTQEAKKML 197
Y+ LI K+ Q++KK+L
Sbjct: 344 YNTLIYAYCKEGMMQQSKKLL 364
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 21/202 (10%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +M +C + S+A ++ +M +G PD +T N LI GL GR E
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD--------QITYNTLIFGLSKAGRVE 317
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
EA L+ M + G PDT ++T++++G R GE A L EM+ + N L
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLL 377
Query: 122 ----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
G + +M G L+ Y +L+ + G+V +A + D +
Sbjct: 378 HGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSL 437
Query: 172 RQSVIYDVLISGLD--KKARTQ 191
+ Y L + L KKA+ Q
Sbjct: 438 SDASAYSTLETTLKWLKKAKEQ 459
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 32/183 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
++ L+ C+ +A ++ ++ + GF PD N ++ G + E
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD--------CFLYNTIMKGFCTLSKGSE 283
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+ + + M E G+ PD +++ ++ G + G + +A
Sbjct: 284 AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR----------------------- 320
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+Y M G D YTSL+N C GE + A +LL+E+ G Y+ L+ G
Sbjct: 321 -MYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 184 LDK 186
L K
Sbjct: 380 LCK 382
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
YA + ++ YC +A D+M+ KG + V + ++
Sbjct: 319 YACLAVIDRYCKNMNLPEALGFLDKMLGKGL--------KVNCVIVSLILQCYCKMDMCL 370
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
EALE + +M +F D V + ++G + +A++L EM +
Sbjct: 371 EALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKD-------------- 416
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+G + D +NYT+LI+ YC G+VV A L+DE+ G + Y+VL+S
Sbjct: 417 ----------RGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVS 466
Query: 183 GLDKKARTQE 192
GL + +E
Sbjct: 467 GLARNGHEEE 476
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ YC +G+ A + D+MI G SP L+T N L+ GL G EE
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNGM--------SPDLITYNVLVSGLARNGHEEEV 477
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQ----- 119
LEI M G P+ V+ + ++ G ++++A D +++ N ++
Sbjct: 478 LEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEA 537
Query: 120 PLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDV 179
LS Y + + + L V Y L + C +G + KA +L +++ +
Sbjct: 538 GLSKKAYKAFVRLEYPLRKSV-YIKLFFSLCIEGYLEKAHDVLKKMSAY----------- 585
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLC---TSSWPTLTFDTLIEN-CSNNEFTSLVELVKG 235
R + + M ++ C + FDT++E + FT + +
Sbjct: 586 ---------RVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTY 636
Query: 236 FRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCD 275
R+ +L+ +A S+ M KPD Y L+ + + D
Sbjct: 637 CRLNELQ-KAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD 675
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 109/255 (42%), Gaps = 34/255 (13%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
S V NALI G GR E+A + M ++G PD V++ +++ ++ L++A +
Sbjct: 219 STVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV- 277
Query: 104 LEMDEMMQS---------NNMLA--IQPLSGDVYWSLMGKQ---GGLLDEVNYTSLINAY 149
M EM++S N +L + D ++ M K+ G D V+Y++LI +
Sbjct: 278 --MAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETF 335
Query: 150 CADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
C KA L +E+ G V V Y LI ++ + AKK LL + L S
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK-LLDQMTELGLS-- 392
Query: 210 PTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIV 269
P F T I L L K + ++A V N M+ PD YN LI
Sbjct: 393 PDRIFYTTI----------LDHLCKSGNV----DKAYGVFNDMIEHEITPDAISYNSLIS 438
Query: 270 EHCRCDNGDKAYDMY 284
CR +A ++
Sbjct: 439 GLCRSGRVTEAIKLF 453
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 114/285 (40%), Gaps = 54/285 (18%)
Query: 1 MAYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSL-VTCNALIHGLGFFG 59
+ + Y + C +F + M GF+PD + F+ L + C + +GF
Sbjct: 78 IPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPD-IWAFNVYLDLLCRE--NKVGF-- 132
Query: 60 RAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQ 119
A++ M + G PD VS+T +++G FR G++ A ++
Sbjct: 133 ----AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEI----------------- 171
Query: 120 PLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS-VIYD 178
W+ M + G D +L+ C +V A ++ E V+ S V+Y+
Sbjct: 172 -------WNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 179 VLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIENCSNNEFTSLVELVKGFR 237
LISG K R ++A+ + + C P L T++ L+ +N
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCE---PDLVTYNVLLNYYYDN------------- 268
Query: 238 IRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYD 282
++ A V+ M+ + D YN L+ HCR + DK Y+
Sbjct: 269 --NMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 32/193 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y L+ +C KA+ + ++M KG + + +VT +LI G +
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMN--------VVTYTSLIKAFLREGNSSV 378
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A ++L M E+GL PD + +T ++ + G + KAY + ++M++ I P
Sbjct: 379 AKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGV---FNDMIEHE----ITP--- 428
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
D ++Y SLI+ C G V +A L +++ + + +I G
Sbjct: 429 --------------DAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGG 474
Query: 184 LDKKARTQEAKKM 196
L + + A K+
Sbjct: 475 LIRGKKLSAAYKV 487
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 34/214 (15%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFH-MHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGR 60
AY+Y L+ +C K ++ M +M +GF +V+ + LI
Sbjct: 290 AYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC---------DVVSYSTLIETFCRASN 340
Query: 61 AEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP 120
+A + M + G+ + V++T+++ F R G A L +D+M + L + P
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKL---LDQMTE----LGLSP 393
Query: 121 LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
D + YT++++ C G V KA + +++ ++ Y+ L
Sbjct: 394 -----------------DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSL 436
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
ISGL + R EA K+ + C T F
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ C G KA+ + + MI E +P ++ N+LI GL GR EA
Sbjct: 398 YTTILDHLCKSGNVDKAYGVFNDMIEH--------EITPDAISYNSLISGLCRSGRVTEA 449
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMM 110
+++ M PD ++F ++ G R +L AY + D+MM
Sbjct: 450 IKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV---WDQMM 492
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 28/251 (11%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
++ + N LI+ L G E+A G +M L P++VSF ++ GF + A +
Sbjct: 150 TIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVF 209
Query: 104 LEMDEMMQSNNMLAIQPLSGDVYWSL-MGKQGGLLDE----------VNYTSLINAYCAD 152
EM EM +++ L G + + MGK LL++ V + L+ C
Sbjct: 210 DEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCK 269
Query: 153 GEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL 212
GE +AK L+ ++ + G V Y +L+S L K+ R EAK +L + +
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKR-------RI 322
Query: 213 TFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
D +I N N + + + +R VL M KP+ A Y +I C
Sbjct: 323 KPDVVIYNILVNHLCTECRVPEAYR----------VLTEMQMKGCKPNAATYRMMIDGFC 372
Query: 273 RCDNGDKAYDM 283
R ++ D ++
Sbjct: 373 RIEDFDSGLNV 383
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 86/223 (38%), Gaps = 51/223 (22%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------------EFS- 42
+ Y L+ C +G+F +A +H M + G PD ++ EF
Sbjct: 335 VFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLL 394
Query: 43 --------PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
P ++ N +I G G +G AL +L M G+ P+ + A++ G+ + G
Sbjct: 395 SMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
L A+ +K EM I P D Y L+ A C G
Sbjct: 455 RLIDAWWVKNEMRST-------KIHP-----------------DTTTYNLLLGAACTLGH 490
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
+ A L DE+ G + Y L+ GL K R ++A+ +L
Sbjct: 491 LRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLL 533
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 118/284 (41%), Gaps = 42/284 (14%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
+ ++M C +G+ A + +MI+ G +P +T N L++GL G E+A
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITH--------NHLLNGLCKAGYIEKA 175
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-MQSNNM-------- 115
++R M EMG P+ VS+ ++ G + + KA L M++ ++ N +
Sbjct: 176 DGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHA 235
Query: 116 LAIQPLSGDVYWSLM------GKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
L + + G+ L+ + LD V T L+++ +G VV+A + E++
Sbjct: 236 LCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKN 295
Query: 170 DVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIEN-CSNNEFTS 228
SV+Y+V+I GL A + +V T++TLI C +F
Sbjct: 296 VPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPD--VFTYNTLISALCKEGKF-- 351
Query: 229 LVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
+EA + TM + PD Y +I C
Sbjct: 352 --------------DEACDLHGTMQNGGVAPDQISYKVIIQGLC 381
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 32/178 (17%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
G+ S A + + M+ G P+ T NALIHG GR +A + M
Sbjct: 419 GDTSSALSVLNLMLSYGVKPNVYTN--------NALIHGYVKGGRLIDAWWVKNEMRSTK 470
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGG 135
+ PDT ++ ++ +G LR A+ L DEM++ QP
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRLAFQL---YDEMLRR----GCQP--------------- 508
Query: 136 LLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEA 193
D + YT L+ C G + KA++LL + G V + +L + R EA
Sbjct: 509 --DIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 125/316 (39%), Gaps = 73/316 (23%)
Query: 14 DKGEFSKAFHMHDQMIHKGFLPDFVT-----------------------------EFSPS 44
D +KA +++ MI G +P +T EFS
Sbjct: 215 DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE- 273
Query: 45 LVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKL 104
VT N LI+G G+ EEA M G SF ++ G+ + G A+ +
Sbjct: 274 -VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGV-- 330
Query: 105 EMDEMMQSNNMLAIQPLSG--DVYWSLMGKQGGLLDE------------VNYTSLINAYC 150
DEM+ + I P + ++Y + G + D V+Y +L++ Y
Sbjct: 331 -TDEMLNA----GIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYI 385
Query: 151 ADGEVVKAKTLLDELTHFGDVRQSVI-YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSW 209
G+ V+A L D+L GD+ S++ Y+ LI GL + + A+++ + L +
Sbjct: 386 KMGKFVEASLLFDDL-RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI---F 441
Query: 210 P-TLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
P +T+ TL VKGF + A V + ML KPDG Y
Sbjct: 442 PDVITYTTL---------------VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 269 VEHCRCDNGDKAYDMY 284
V R + DKA+ ++
Sbjct: 487 VGELRLGDSDKAFRLH 502
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 92/242 (38%), Gaps = 65/242 (26%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y LM Y G+F +A + D + + PS+VT N LI GL G E
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDL--------RAGDIHPSIVTYNTLIDGLCESGNLEG 427
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFR------------------------------I 93
A + M +FPD +++T +V GF + +
Sbjct: 428 AQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAV 487
Query: 94 GELR-----KAYDLKLEM-----------------DEMMQSNNMLAIQPLSGDVYWSLMG 131
GELR KA+ L EM D + + N++ ++
Sbjct: 488 GELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF----- 542
Query: 132 KQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQ 191
+ G + D V YT++I Y +G+ A+ L DE+ + Y VLI G K R +
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 192 EA 193
+A
Sbjct: 603 QA 604
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 34/242 (14%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
YAY G+ KAF +H++M+ +P L N I GL G
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMVA-------TDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+A+E R + +GL PD V++T V+ G+ G+ + A +L DEM++
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL---YDEMLRKR-------- 580
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI-YDVL 180
+Y S+ + Y LI + G + +A E+ G VR +V+ ++ L
Sbjct: 581 ---LYPSV----------ITYFVLIYGHAKAGRLEQAFQYSTEMKKRG-VRPNVMTHNAL 626
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
+ G+ K EA + L + + + T + +NC ++ +V+L K ++
Sbjct: 627 LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTM-LISKNCDFEKWEEVVKLYKEMLDKE 685
Query: 241 LE 242
+E
Sbjct: 686 IE 687
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 127/322 (39%), Gaps = 60/322 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFV-------------------------- 38
Y +MG Y G+FSKA + D M +G +PD +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 39 ---TEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGE 95
+ P +T N L+ + A+++ M PD ++ A++S + R G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 96 LRKAYDLKLEMD------EMMQSNNML---AIQPLSGDV--YWSLMGKQGGLLDEVNYTS 144
+A L +E++ + + N++L A + + V + M K G DE+ Y +
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 145 LINAYCADGEVVKAKTLLDELTHF-GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYH 203
+I+ Y G++ A L ++ G ++ Y VLI L K RT EA ++ +
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM--- 464
Query: 204 LCTSSWPTL-TFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGA 262
L PTL T+ LI C G+ EA + ML KPD
Sbjct: 465 LDVGIKPTLQTYSALI--C-------------GYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 263 VYNFLIVEHCRCDNGDKAYDMY 284
Y+ ++ R + KA+ +Y
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLY 531
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 118/295 (40%), Gaps = 47/295 (15%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y ++ Y +G+ A ++ M KG ++ +P +T LI LG R EA
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDM--KG-----LSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
++ M ++G+ P +++A++ G+ + G+ +A D
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT---------------------- 495
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+S M + G D + Y+ +++ E KA L ++ G +Y+++I GL
Sbjct: 496 --FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGL 553
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLT--------FD-------TLIENCSNNEFTSL 229
K+ R+ + +K + + LC + ++ FD I N E +L
Sbjct: 554 MKENRSDDIQKTIRDM-EELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTL 612
Query: 230 VELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ ++ + +EA +L + + LIV HC+ +N A D Y
Sbjct: 613 LSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEY 667
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 31/192 (16%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y ++ Y G ++A + ++ KGF PD VT N+L++ E
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFFPD--------AVTYNSLLYAFARERNTE 384
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
+ E+ + M +MG D +++ ++ + + G+L DL L++
Sbjct: 385 KVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL----DLALQL---------------- 424
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
Y + G G D + YT LI++ V+A L+ E+ G Y LI
Sbjct: 425 ---YKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALIC 481
Query: 183 GLDKKARTQEAK 194
G K + +EA+
Sbjct: 482 GYAKAGKREEAE 493
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 46/253 (18%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT---------------------------- 39
L+ +C++ + +A+++ +M G PD VT
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 40 EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA 99
+ P++ TC +++G G+ EEAL M E+G+ P+ F +++ GF I ++
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 100 YDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK------------QGGLLDEVN-YTSLI 146
++ M+E +++ L WS +G +GG+ +++ ++ L
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMN--AWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
Query: 147 NAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCT 206
Y GE KA+ +L+++ FG VIY +ISG ++A ++ + +
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGL 703
Query: 207 SSWPTL-TFDTLI 218
S P L T++TLI
Sbjct: 704 S--PNLTTYETLI 714
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 115/274 (41%), Gaps = 33/274 (12%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ C +A + ++M +G D + N LI GL GR +EA E+
Sbjct: 335 LINTLCKSRRVDEALEVFEKM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 392
Query: 68 LRGMP-EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD-- 124
L M E P+ V++ ++ G+ R G+L A ++ M E N++ + + G
Sbjct: 393 LVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 125 ---------VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV 175
V++ M K+G + V Y +LI+A C+ V KA +++ G +
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 176 IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE-NCSNNEFTSLVELVK 234
IY LISGL + R +A +++ L S L ++ LI C N + E+
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKL--KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEM-- 568
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
+ D+E E KPD YN LI
Sbjct: 569 ---LTDMEKEGK-----------KPDSITYNTLI 588
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 42/240 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY L+G +CDK K + M M +G PD +T N LI FFG+ ++
Sbjct: 548 AYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSIT--------YNTLI---SFFGKHKD 596
Query: 64 ALEILRGMPEM---GLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP 120
+ R M +M GL P ++ AV+ + +GEL +A LKL D + S + P
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA--LKLFKDMGLHSK----VNP 650
Query: 121 LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSV-IYDV 179
+ V Y LINA+ G +A +L +E+ VR +V Y+
Sbjct: 651 -----------------NTVIYNILINAFSKLGNFGQALSLKEEM-KMKMVRPNVETYNA 692
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS-NNEFTSLVELVKGFRI 238
L L++K + + K++ +V C + +T + L+E S ++E L + ++G+ +
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPN--QITMEILMERLSGSDELVKLRKFMQGYSV 750
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 51/284 (17%)
Query: 2 AYAYVNLMGPYCDKGEF-SKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGR 60
AY Y N + C +G +A + ++M GF D VT NAL+ G R
Sbjct: 279 AYTY-NTLITCCKRGSLHQEAAQVFEEMKAAGFSYD--------KVTYNALLDVYGKSHR 329
Query: 61 AEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP 120
+EA+++L M G P V++ +++S + R G L +A +LK +M E
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE------------ 377
Query: 121 LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
+G D YT+L++ + G+V A ++ +E+ + G ++
Sbjct: 378 ------------KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 181 ISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
I + + E K+ + ++C S +T++TL+ N
Sbjct: 426 IKMYGNRGKFTEMMKIFDEI--NVCGLSPDIVTWNTLLAVFGQN---------------G 468
Query: 241 LENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+++E + V M P+ +N LI + RC + ++A +Y
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 113/289 (39%), Gaps = 48/289 (16%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
Y ++G+F++ + D++ V SP +VT N L+ G G E + + M
Sbjct: 429 YGNRGKFTEMMKIFDEI--------NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEM------DEMMQSNNMLAIQPLSGDV 125
G P+ +F ++S + R G +A + M ++ N +LA G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG-- 538
Query: 126 YWSLMGKQGGLLD-------EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYD 178
W K ++ E+ Y SL++AY E+ +L +E +Y
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE-----------VYS 587
Query: 179 VLISGLDKKARTQEAKKMLLSLVYHLCTS----SWPTLTFDTLIENCSNNEFTSLVELVK 234
+I E + +LL + +C+ F L E + + T+L +V
Sbjct: 588 GVI----------EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 235 GFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+ R + +A VL+ M P A YN L+ H R + K+ ++
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 31/247 (12%)
Query: 51 LIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE-- 108
+I LG GR A + G+ E G D S+T+++S F G R+A ++ +M+E
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 109 ----MMQSNNMLAIQPLSGDVYWSL------MGKQGGLLDEVNYTSLINAYCADGEV-VK 157
++ N +L + G + + M G D Y +LI C G + +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQE 297
Query: 158 AKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTL 217
A + +E+ G V Y+ L+ K R +EA K+L +V + + S +T+++L
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS--IVTYNSL 355
Query: 218 IENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNG 277
I + + + +EA + N M KPD Y L+ R
Sbjct: 356 ISAYARD---------------GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 278 DKAYDMY 284
+ A ++
Sbjct: 401 ESAMSIF 407
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 98/233 (42%), Gaps = 43/233 (18%)
Query: 38 VTEF-SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL 96
+ EF P T N LIHG G ++AL++ M + + P V+F ++ G + +
Sbjct: 144 IDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRV 203
Query: 97 RKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVV 156
++A +K ++ML + + V+ Y SLI A C GE+
Sbjct: 204 KEALKMK---------HDMLKVYGVRPTVHI--------------YASLIKALCQIGELS 240
Query: 157 KAKTLLDELTHFGDVR-QSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFD 215
A L DE + G ++ + IY LIS L K R+ E +L + C T+T++
Sbjct: 241 FAFKLKDE-AYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPD--TVTYN 297
Query: 216 TLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLI 268
LI GF + + A VL+ M+ KPD YN ++
Sbjct: 298 VLIN---------------GFCVENDSESANRVLDEMVEKGLKPDVISYNMIL 335
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 117/283 (41%), Gaps = 36/283 (12%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C G+ + A + + M +P F PS C+ L+ GL + ++A+ ILR M
Sbjct: 115 CSNGKLTDACKLVEVMARHNQVPHF-----PS---CSNLVRGLARIDQLDKAMCILRVMV 166
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNMLAIQPLSGDV- 125
G PDT+++ ++ + G +R A L +M +++ N ++ G+
Sbjct: 167 MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226
Query: 126 ----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+W + G + YT L+ C +A +L+++ G V Y+ L+
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV 286
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
+ ++ +E ++ ++ H T+T++TL+ + ++E+ VE
Sbjct: 287 NYNCRRGNLEEVASVIQHILSH--GLELNTVTYNTLLHSLCSHEYWDEVE---------- 334
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+LN M + P YN LI C+ +A D +
Sbjct: 335 -----EILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFF 372
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 32/190 (16%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ C S+A QM+ + LPD VT N ++ + G ++
Sbjct: 351 TYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTY--------NTVLGAMSKEGMVDD 402
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A+E+L + P +++ +V+ G + G ++KA +L
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL--------------------- 441
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ M G D++ SLI +C V +A +L E ++ G+ + Y ++I G
Sbjct: 442 ---YHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQG 498
Query: 184 LDKKARTQEA 193
L KK + A
Sbjct: 499 LCKKKEIEMA 508
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 38/217 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y ++G C KG A + + M G PD +T N +I + +G AE+
Sbjct: 176 TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITY--------NTVIRCMFDYGNAEQ 227
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFR-IGELRKAYDLKLEMDEMMQSNNMLAIQPLS 122
A+ + + G P +++T +V R G R AI+ L
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR-------------------AIEVLE 268
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
M +G D V Y SL+N C G + + +++ + G +V Y+ L+
Sbjct: 269 D------MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 183 GLDKKARTQEAKKMLLSLVYHLCTSSWPT-LTFDTLI 218
L E ++ +L+++Y TS PT +T++ LI
Sbjct: 323 SLCSHEYWDEVEE-ILNIMYQ--TSYCPTVITYNILI 356
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y L+ Y G +A + D+M KG + + V N++++ L G E
Sbjct: 328 TYGALVDAYGRAGSSDEALRLCDEMTSKGLVVN--------TVIYNSIVYWLFMEGDIEG 379
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A+ +LR M + D + VV G R G +++A + + ++ E +++ L
Sbjct: 380 AMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMH 439
Query: 122 ---------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
D M QG LD +++ +LI+ Y +G++ +A + D +
Sbjct: 440 HFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTS 499
Query: 173 QSVIYDVLISGLDKKARTQEAKKML 197
VIY+ +++GL K+ A+ ++
Sbjct: 500 NLVIYNSIVNGLSKRGMAGAAEAVV 524
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 26/196 (13%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+A N MG + E + + ++ +M G++ + + T N +I+ +
Sbjct: 183 VHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVEN--------VNTFNLVIYSFCKESKL 234
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EAL + M + G++P+ VSF ++ G + G++R A L +M M S N ++ +
Sbjct: 235 FEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMG--MMSGNFVSPNAV 292
Query: 122 SGDVYWSLMGKQGGL----------------LDEVNYTSLINAYCADGEVVKAKTLLDEL 165
+ + + K G L +E Y +L++AY G +A L DE+
Sbjct: 293 TYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEM 352
Query: 166 THFGDVRQSVIYDVLI 181
T G V +VIY+ ++
Sbjct: 353 TSKGLVVNTVIYNSIV 368
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 106/269 (39%), Gaps = 59/269 (21%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ Y G+ ++ + D M+ +G + + P++ T N L+ + EEA
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEA 207
Query: 65 LEILRGMPEMGLFPDTVSFTA-------------------------------------VV 87
E+++ M E G+ PDTV++ VV
Sbjct: 208 WEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVV 267
Query: 88 SGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG-----------DVYWSLMGKQGGL 136
G+ R G +R M EM N++ L D +LM +
Sbjct: 268 GGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVK 327
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
D + Y++++NA+ + G + KA + E+ G + Y +L G + ++A+++
Sbjct: 328 ADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 387
Query: 197 LLSLVYHLCTSSWPTLT-FDTLIEN-CSN 223
L +L+ S P + F T+I CSN
Sbjct: 388 LETLIVE----SRPNVVIFTTVISGWCSN 412
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 24/158 (15%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P+ +T N++I G R ++A +L M G PD V+F+ +++G+ + + ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
EM ++G + + V YT+LI+ +C G++ A+ LL
Sbjct: 68 FCEMH------------------------RRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 103
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
+E+ G + + +++GL K ++A +L L
Sbjct: 104 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 32/162 (19%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +++ +C + A M D M KG PD VT FS LI+G R +
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT-FS-------TLINGYCKAKRVDN 63
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
+EI M G+ +TV++T ++ GF ++G+L A DL ++EM+ + P
Sbjct: 64 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL---LNEMISC----GVAP--- 113
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDEL 165
D + + ++ C+ E+ KA +L++L
Sbjct: 114 --------------DYITFHCMLAGLCSKKELRKAFAILEDL 141
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ YC E KA+ + D+M + E +P ++T +I GLG G+ ++
Sbjct: 248 TYNSLIDVYCKDREIEKAYKLIDKMREE--------EETPDVITYTTVIGGLGLIGQPDK 299
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGF---FRIGELRKAYD 101
A E+L+ M E G +PD ++ A + F R+G+ K D
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVD 340
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 117/298 (39%), Gaps = 44/298 (14%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
++ + L+ + D+GE+ K F + +M G PD +F N +I G F
Sbjct: 409 SFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD--RQF------YNVVIDTFGKFNCL 460
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA---- 117
+ A+ M G+ PD V++ ++ + G + + EM E M+ L
Sbjct: 461 DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR----HIVAEEMFEAMERRGCLPCATT 516
Query: 118 ----IQPLSGDVYW----SLMGK---QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELT 166
I W L+GK QG L + V +T+L++ Y G A L+E+
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 167 HFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEF 226
G S +Y+ LI+ ++ +++A +++ +T D L
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQA------------VNAFRVMTSDGL-----KPSL 619
Query: 227 TSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+L L+ F + EA +VL M KPD Y L+ R D K +Y
Sbjct: 620 LALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ Y +G+ SK ++ MI P++ T ++LI+GL R +EA+++
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQ--------MSIDPNVFTYSSLIYGLCMHNRVDEAIKM 175
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------ 121
L M G P+ V+++ + +GFF+ + L +M + + N ++ L
Sbjct: 176 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 235
Query: 122 SGDVYWSL-----MGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI 176
+G + +L M G + + +Y ++ A+GEV KA + + + + +
Sbjct: 236 AGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIIT 295
Query: 177 YDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
Y ++I G+ K +EA + L + + T
Sbjct: 296 YTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTI 333
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 34/211 (16%)
Query: 7 NLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALE 66
+L+ +C A ++ QM G D V + LI L ALE
Sbjct: 18 SLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVD--------TILIDTLCKNRLVVPALE 69
Query: 67 ILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVY 126
+L+ M + G+ P+ V+++++++G + G L A EMD + N+
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV----------- 118
Query: 127 WSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDK 186
+ +++LI+AY G++ K ++ + Y LI GL
Sbjct: 119 -------------ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCM 165
Query: 187 KARTQEAKKMLLSLVYHLCTSSWPTLTFDTL 217
R EA KML ++ CT + +T+ TL
Sbjct: 166 HNRVDEAIKMLDLMISKGCTPN--VVTYSTL 194
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
SP++VT ++LI GL GR +A L M + P+ ++F+A++ + + G+L K
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSK-- 136
Query: 101 DLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKT 160
+D + + ++I P + Y+SLI C V +A
Sbjct: 137 -----VDSVYKMMIQMSIDP-----------------NVFTYSSLIYGLCMHNRVDEAIK 174
Query: 161 LLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
+LD + G V Y L +G K +R + K+L
Sbjct: 175 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLL 211
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL- 102
SL T N++I G ++EEA +LR M G P++++ +++ RI L+ +
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 103 ------KLEMDEMMQSNNMLAIQPLSGDVYWS-----LMGKQGGLLDEVNYTSLINAYCA 151
K D M N+++ + SG + + LM K+ DEV YTSLI+ Y
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR----DEVTYTSLIDGYGN 460
Query: 152 DGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
GE A L E+T G V ++S E +++ + +
Sbjct: 461 QGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKM 509
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 35/153 (22%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPD----------------------FVTE-- 40
Y ++ +C+KG A + +MI KG P+ F E
Sbjct: 321 YTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEML 380
Query: 41 ---FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR 97
+ ++++CN +I G G+++EA EI + M E G+ P+ +++ A++ GF + ++
Sbjct: 381 RNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVE 440
Query: 98 KAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLM 130
K L E+ L ++P SG Y +L+
Sbjct: 441 KGLKLYKEL-------KALGLKP-SGMAYAALV 465
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 103/279 (36%), Gaps = 38/279 (13%)
Query: 17 EFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGL 76
+ + + +H +M+ +EF + C LI L G E E+L+ + GL
Sbjct: 195 KLDRFWELHKEMVE--------SEFDSERIRC--LIRALCDGGDVSEGYELLKQGLKQGL 244
Query: 77 FPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP-----------LSGDV 125
P + ++SGF IG ++ M +M Q L
Sbjct: 245 DPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYC 304
Query: 126 YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLD 185
+ + +G D V YT++I +C G + A+ L E+ G Y+V+I G
Sbjct: 305 IFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHF 364
Query: 186 KKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEA 245
K+ +SLV ++ ++ N S ++KGF +EA
Sbjct: 365 KRGE--------ISLVEAF---------YNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEA 407
Query: 246 ASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+ M P+ YN LI C+ + +K +Y
Sbjct: 408 FEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLY 446
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 19/209 (9%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y L+ +C+ G ++ + MI P S+ +I GL +
Sbjct: 249 YVYAKLISGFCEIGNYACMSEVLHTMIAWNHFP--------SMYIYQKIIKGLCMNKKQL 300
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
EA I + + + G PD V +T ++ GF G L A L EM + N A +
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 122 -----SGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
G++ +++ M + G ++ ++I +C+ G+ +A + ++ G
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSL 200
++ Y+ LI G K+ + ++ K+ L
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKEL 449
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 109/268 (40%), Gaps = 47/268 (17%)
Query: 39 TEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRK 98
+ +P+ T N IHG R EEAL ++ M G P +S+T ++ + + E K
Sbjct: 218 SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 99 AYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKA 158
Y++ EM+ G + + YT+++++ A E +A
Sbjct: 278 VYEMLSEME------------------------ANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 159 KTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI 218
+ + G S+ Y+ LI L + R +EA+++ + L S T T++++I
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI-NTSTYNSMI 372
Query: 219 E-NCSNNEFTSLVELVKGFRIRDLEN--------------------EAASVLNTMLHWND 257
C ++E +EL+K +L N E +L M+ +
Sbjct: 373 AMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHH 432
Query: 258 -KPDGAVYNFLIVEHCRCDNGDKAYDMY 284
D + Y FLI CR + + AY ++
Sbjct: 433 LSLDESTYTFLIQRLCRANMCEWAYCLF 460
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 41/203 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------EFSPSLVTC--- 48
+Y ++ YC + EF K + M +M G P+ +T EF +L
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 49 ------------NALIHGLGFFGRAEEALEILR-GMPEMGLFPDTVSFTAVVSGFFRIGE 95
N LIH L GR EEA + R MPE+G+ +T ++ ++++ + E
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 96 LRKAYDLKLEMDEMMQSN-NMLAIQPL------SGDVY------WSLMGKQGGLLDEVNY 142
KA +L EM+ N ++ QPL GDV ++ K LDE Y
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 143 TSLINAYCADGEVVKAKTLLDEL 165
T LI C A L +E+
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEM 463
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 109/268 (40%), Gaps = 47/268 (17%)
Query: 39 TEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRK 98
+ +P+ T N IHG R EEAL ++ M G P +S+T ++ + + E K
Sbjct: 218 SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 99 AYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKA 158
Y++ EM+ G + + YT+++++ A E +A
Sbjct: 278 VYEMLSEME------------------------ANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 159 KTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLI 218
+ + G S+ Y+ LI L + R +EA+++ + L S T T++++I
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI-NTSTYNSMI 372
Query: 219 E-NCSNNEFTSLVELVKGFRIRDLEN--------------------EAASVLNTMLHWND 257
C ++E +EL+K +L N E +L M+ +
Sbjct: 373 AMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHH 432
Query: 258 -KPDGAVYNFLIVEHCRCDNGDKAYDMY 284
D + Y FLI CR + + AY ++
Sbjct: 433 LSLDESTYTFLIQRLCRANMCEWAYCLF 460
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 41/203 (20%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT------------EFSPSLVTC--- 48
+Y ++ YC + EF K + M +M G P+ +T EF +L
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 49 ------------NALIHGLGFFGRAEEALEILR-GMPEMGLFPDTVSFTAVVSGFFRIGE 95
N LIH L GR EEA + R MPE+G+ +T ++ ++++ + E
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 96 LRKAYDLKLEMDEMMQSN-NMLAIQPL------SGDVY------WSLMGKQGGLLDEVNY 142
KA +L EM+ N ++ QPL GDV ++ K LDE Y
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 143 TSLINAYCADGEVVKAKTLLDEL 165
T LI C A L +E+
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEM 463
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 22/194 (11%)
Query: 46 VTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLE 105
++ A++ G GR EEALE+ R +P L+ S+TA++SGF + G+ +A+ + E
Sbjct: 172 ISWTAMVSGYAKSGRKEEALELFRILPVKNLY----SWTALISGFVQSGKGLEAFSVFTE 227
Query: 106 M-DEMMQSNNMLAIQPLSG---DVYWSLMGKQ-GGLLDEVNYTS-------LINAYCADG 153
M E + + L + + G ++ S+ G+Q GL+ + + S LI+ Y
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287
Query: 154 EVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT 213
+V+ AK + + H R V + LI G+ + + ++A + +V H + +T
Sbjct: 288 DVIAAKDIFSRMRH----RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPN--EVT 341
Query: 214 FDTLIENCSNNEFT 227
F LI CS+ F
Sbjct: 342 FVGLIYACSHVGFV 355
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+Y++++ C G+ +A M ++ KG + D + N + LG +
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTD--------TMMYNTVFSALGKLKQISH 460
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD------EMMQSNNMLA 117
++ M + G PD ++ +++ F R+GE+ +A ++ E++ +++ N+++
Sbjct: 461 IHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN 520
Query: 118 IQPLSGD-----VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR 172
+GD V + M ++G D V Y++L+ + V A +L +E+ G
Sbjct: 521 CLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQP 580
Query: 173 QSVIYDVLISGLDKKARTQEA 193
V Y++L+ L+K RT EA
Sbjct: 581 NIVTYNILLDCLEKNGRTAEA 601
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 41/226 (18%)
Query: 2 AYAYVNLMGPY--CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTC----------- 48
+++Y L+ Y CDK + + + GF PD T F P C
Sbjct: 71 SFSYNTLLSSYAVCDKPRVT--IFAYKTFVSNGFSPDMFT-FPPVFKACGKFSGIREGKQ 127
Query: 49 -----------------NALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFF 91
N+L+H G G + A ++ MP D VS+T +++GF
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMP----VRDVVSWTGIITGFT 183
Query: 92 RIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK--QGGLLDEVNYTSLINAY 149
R G ++A D +MD + + SG V +GK G +L + SL
Sbjct: 184 RTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 150 CADGEVVKAKTLLDELTHFGDV--RQSVIYDVLISGLDKKARTQEA 193
VK + L D + FG++ + V ++ +ISGL R++EA
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEA 289
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 50/264 (18%)
Query: 17 EFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGL 76
+F A+H+ D M + S+ T LI G A EA+ M + G
Sbjct: 166 QFDLAWHLIDLMKSRNV--------EISIETFTILIRRYVRAGLASEAVHCFNRMEDYGC 217
Query: 77 FPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGL 136
PD ++F+ V+S R R+A + + D + +P
Sbjct: 218 VPDKIAFSIVISNLSR---KRRASEAQSFFDSLKDR-----FEP---------------- 253
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
D + YT+L+ +C GE+ +A+ + E+ G Y ++I L + + A +
Sbjct: 254 -DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 197 LLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWN 256
++ C + +TF+ L+ V + G + L+ V N M
Sbjct: 313 FADMLDSGCAPN--AITFNNLMR----------VHVKAGRTEKVLQ-----VYNQMKKLG 355
Query: 257 DKPDGAVYNFLIVEHCRCDNGDKA 280
+PD YNFLI HCR +N + A
Sbjct: 356 CEPDTITYNFLIEAHCRDENLENA 379
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 37/193 (19%)
Query: 4 AYVNLMGPYCDKG--EFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
++ ++M YC G + +K+F F PS+ + N LI+GL G
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSF----------FCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EALE+ M + G+ PD+V++ + GF +G + A+++ +M + + L
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD----------KGL 323
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI-YDVL 180
S DV + YT L+ C G + LL ++ G S+I V+
Sbjct: 324 SPDV--------------ITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 181 ISGLDKKARTQEA 193
+SGL K R EA
Sbjct: 370 LSGLCKTGRIDEA 382
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 120/302 (39%), Gaps = 58/302 (19%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ C G +A + +QM G SP LV + +IHGL G+ + AL +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGL--------SPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAI--------- 118
M + + P++ + A++ G + G L +A L +D ++ S L I
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL---LDSLISSGETLDIVLYNIVIDG 477
Query: 119 QPLSGDVYWSL----MGKQGGLLDEV-NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
SG + +L + + G+ V + SLI YC + +A+ +LD + +G
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Query: 174 SVIYDVLI---------SGLDKKARTQEAK-----KMLLSLVYHLCTSSWPTLTFDTLIE 219
V Y L+ +D+ R +A+ + S+++ W E
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH-------E 590
Query: 220 NCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDK 279
NC++ + E K +RD+E+E PD YN +I CR +
Sbjct: 591 NCNHVLRERIFEKCKQ-GLRDMESEGIP-----------PDQITYNTIIQYLCRVKHLSG 638
Query: 280 AY 281
A+
Sbjct: 639 AF 640
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 37/193 (19%)
Query: 4 AYVNLMGPYCDKG--EFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
++ ++M YC G + +K+F F PS+ + N LI+GL G
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSF----------FCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EALE+ M + G+ PD+V++ + GF +G + A+++ +M + + L
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD----------KGL 323
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI-YDVL 180
S DV + YT L+ C G + LL ++ G S+I V+
Sbjct: 324 SPDV--------------ITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 181 ISGLDKKARTQEA 193
+SGL K R EA
Sbjct: 370 LSGLCKTGRIDEA 382
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 120/302 (39%), Gaps = 58/302 (19%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
++ C G +A + +QM G SP LV + +IHGL G+ + AL +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGL--------SPDLVAYSIVIHGLCKLGKFDMALWL 420
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAI--------- 118
M + + P++ + A++ G + G L +A L +D ++ S L I
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL---LDSLISSGETLDIVLYNIVIDG 477
Query: 119 QPLSGDVYWSL----MGKQGGLLDEV-NYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
SG + +L + + G+ V + SLI YC + +A+ +LD + +G
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Query: 174 SVIYDVLI---------SGLDKKARTQEAK-----KMLLSLVYHLCTSSWPTLTFDTLIE 219
V Y L+ +D+ R +A+ + S+++ W E
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH-------E 590
Query: 220 NCSNNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDK 279
NC++ + E K +RD+E+E PD YN +I CR +
Sbjct: 591 NCNHVLRERIFEKCKQ-GLRDMESEGIP-----------PDQITYNTIIQYLCRVKHLSG 638
Query: 280 AY 281
A+
Sbjct: 639 AF 640
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 51/297 (17%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLP--DFVTEFSPSLVTCNALIHGLGFFG 59
AY+ NL C +AF ++M+ G P D + + SL + H FFG
Sbjct: 147 AYSRANLPSEAC------RAF---NRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFG 197
Query: 60 RAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL---RKAYDLKLEMD---EMMQSN 113
+A+ G+ P +++ +V G+ RI + RK +D LE + +++ N
Sbjct: 198 KAKG----------FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYN 247
Query: 114 NMLAIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHF 168
+L SGDV + MG G D ++ I+AYC G+V A +LD + +
Sbjct: 248 ALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRY 307
Query: 169 GDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIE-NCSNNEFT 227
V ++ +I L K + +A +L ++ T T+++++ +C + E
Sbjct: 308 DLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD--TWTYNSIMAYHCDHCEV- 364
Query: 228 SLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
N A +L+ M PD YN ++ R D+A +++
Sbjct: 365 ---------------NRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIW 406
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 59 GRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFR---IGELRK----AYDLKLEMDE--- 108
GR A+EIL GMP+ G +P + SF +++ E+ K A L +E+D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 109 ------MMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
+ +S N+ A L + +Q + + ++ LI +C G+ +A LL
Sbjct: 206 NILIKGLCESGNLEAALQLLDE-----FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 163 DELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCS 222
+ + ++ +++LISGL KK R +E +L + ++ C
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK----------------VKGCE 304
Query: 223 NNEFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
N T E++ G + EA +++ M+ W +P Y +++ C
Sbjct: 305 PNPGT-YQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 44/196 (22%)
Query: 8 LMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEI 67
L+ YC++ + ++ + ++ GF+PD VT V CN GR EALE+
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNE--------GRVSEALEV 305
Query: 68 LRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW 127
L + G D V+ +V G+ +G++R A +EM+
Sbjct: 306 LERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEME-------------------- 345
Query: 128 SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI------YDVLI 181
++G L + Y LI YC G + A L F D++ I ++ LI
Sbjct: 346 ----RKGYLPNVETYNLLIAGYCDVGMLDSA------LDTFNDMKTDAIRWNFATFNTLI 395
Query: 182 SGLDKKARTQEAKKML 197
GL RT + K+L
Sbjct: 396 RGLSIGGRTDDGLKIL 411
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 32/176 (18%)
Query: 13 CDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
C+KG +DQMI +G +P S++ + LIH G+ EE+LE++ M
Sbjct: 469 CEKGGMDDLKTAYDQMIGEGGVP--------SIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
G P + +F AV+ GF + D++M +G + M +
Sbjct: 521 TRGYLPRSSTFNAVIIGFCK-------------QDKVM-----------NGIKFVEDMAE 556
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKA 188
+G + D +Y L+ C G++ KA L + V ++ L+ L +K
Sbjct: 557 RGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKT 612
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 113/271 (41%), Gaps = 48/271 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
AY ++ + DKG+ + A + +M G PD +T S +I+G G+ ++
Sbjct: 167 AYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTS--------MINGYCNAGKIDD 218
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
A + + M + ++V+++ ++ G + G++ +A +L EM++
Sbjct: 219 AWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEK--------------- 263
Query: 124 DVYWSLMGKQGGLL--DEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
GGL+ + V YT +I A+C V +A +LD + + G + V VLI
Sbjct: 264 -------EDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
G+ E K L L+ L +L+ C ++ SL+ + +
Sbjct: 317 QGV---LENDEDVKALSKLIDKLVKLGGVSLS------ECFSSATVSLIRMKRW------ 361
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
EA + ML +PDG + + E C
Sbjct: 362 -EEAEKIFRLMLVRGVRPDGLACSHVFRELC 391
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 24/137 (17%)
Query: 61 AEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP 120
A+EAL +LR PE + DTV++ V+ F G+L A L EMD + + P
Sbjct: 146 ADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMD-------CVGLYP 198
Query: 121 LSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
D + YTS+IN YC G++ A L E++ V SV Y +
Sbjct: 199 -----------------DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRI 241
Query: 181 ISGLDKKARTQEAKKML 197
+ G+ K + A ++L
Sbjct: 242 LEGVCKSGDMERALELL 258
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 42/199 (21%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
A +L+ Y G + A + D+ +PD S+VT AL G GR E
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDE------IPD------RSVVTWTALFSGYTTSGRHRE 195
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEM-MQSNNMLAIQPLS 122
A+++ + M EMG+ PD+ V+S +G+L + M+EM MQ N+ +
Sbjct: 196 AIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR----- 250
Query: 123 GDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
T+L+N Y G++ KA+++ D + + V + +I
Sbjct: 251 --------------------TTLVNLYAKCGKMEKARSVFDSMVE----KDIVTWSTMIQ 286
Query: 183 GLDKKARTQEAKKMLLSLV 201
G + +E ++ L ++
Sbjct: 287 GYASNSFPKEGIELFLQML 305
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 82/211 (38%), Gaps = 42/211 (19%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFG--- 59
YAY ++ C G F KA + DQM GF + P T LI +G
Sbjct: 201 YAYNTIINALCRVGNFKKARFLLDQMQLPGF------RYPPDTYTYTILISSYCRYGMQT 254
Query: 60 --------RAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQ 111
R EA + R M G PD V++ ++ G + + +A LE+ E M+
Sbjct: 255 GCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRA----LELFEDMK 310
Query: 112 SNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD- 170
+ +G + ++V Y S I Y E+ A ++ + G
Sbjct: 311 T--------------------KGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLV 201
V S Y LI L + R EA+ +++ +V
Sbjct: 351 VPGSSTYTPLIHALVETRRAAEARDLVVEMV 381
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 89/245 (36%), Gaps = 54/245 (22%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVT----------------------- 39
++Y L+ Y G + + + D+M ++ P +T
Sbjct: 177 FSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFA 236
Query: 40 -----EFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
P +VT N L+ G +EA + R M + G+ PD +++ +V F ++
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 95 ELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGE 154
L K DL E M G L D +Y L+ AY G
Sbjct: 297 RLEKVCDLLGE------------------------MASGGSLPDITSYNVLLEAYAKSGS 332
Query: 155 VVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTF 214
+ +A + ++ G + Y VL++ + R + +++ L + + T+
Sbjct: 333 IKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM--KSSNTDPDAATY 390
Query: 215 DTLIE 219
+ LIE
Sbjct: 391 NILIE 395
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 29/186 (15%)
Query: 34 LPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRI 93
+P + P ++ LI G E+A+EI+R M G+ T++FT ++S ++
Sbjct: 163 IPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKK 222
Query: 94 GELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYT-SLINAYCAD 152
GEL A +L W+ M K+G LD Y +++A
Sbjct: 223 GELEVADNL------------------------WNEMVKKGCELDNAAYNVRIMSAQKES 258
Query: 153 GEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL 212
E V K L++E++ G ++ Y+ L++ ++ EAKK+ L + C +
Sbjct: 259 PERV--KELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPN--AA 314
Query: 213 TFDTLI 218
TF TLI
Sbjct: 315 TFRTLI 320
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 24/185 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
+++ ++ Y + G+ SKA+ + D+M P VT +++T A+I G+
Sbjct: 83 SWIAMISAYAENGKMSKAWQVFDEM------PVRVTTSYNAMIT--AMIKNKCDLGK--- 131
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKA----YDLKLEMDEMMQSNNMLAIQ 119
A E+ +PE + VS+ +++GF R G +A + ++ + + SN +L+
Sbjct: 132 AYELFCDIPE----KNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGY 187
Query: 120 PLSGDVYWSLMGKQGGLLDE-VNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYD 178
+G ++ QG + E V+ +S+++ YC G +V A++L D +T R + +
Sbjct: 188 LRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTE----RNVITWT 243
Query: 179 VLISG 183
+I G
Sbjct: 244 AMIDG 248
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 112/285 (39%), Gaps = 46/285 (16%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
G S+A + +M KG PD T N L+ G E ALE R + ++G
Sbjct: 354 GHLSEAESLLKKMEEKGISPD--------TKTYNILLSLHADAGDIEAALEYYRKIRKVG 405
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQG- 134
LFPDTV+ AV+ + + + + EMD N + I S V + +G
Sbjct: 406 LFPDTVTHRAVLHILCQRKMVAEVEAVIAEMD-----RNSIRIDEHSVPVIMQMYVNEGL 460
Query: 135 --------------GLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVI-YDV 179
+L ++I+ Y G V+A+T+ + R V+ Y+V
Sbjct: 461 VVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNV 520
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
+I K ++A + + +WP + C+ N SL +++ G
Sbjct: 521 MIKAYGKAKLHEKALSLFKGMKNQ---GTWP--------DECTYN---SLFQMLAGV--- 563
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
DL +EA +L ML KP Y +I + R A D+Y
Sbjct: 564 DLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLY 608
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPS-LVTCNALIHGLGFFGR 60
A AY L+ C +G A + ++M G+ PS VT NAL+ GL G
Sbjct: 141 ASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGY---------PSNTVTYNALVRGLCMLGS 191
Query: 61 AEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQP 120
++L+ + + + GL P+ +++ ++ ++ +A L E+ N+++
Sbjct: 192 LNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNV 251
Query: 121 L-----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
L + + +G + V+Y L+ C DG +A +LL E+ G
Sbjct: 252 LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDG-G 310
Query: 170 DVRQSVI-YDVLISGLDKKARTQEAKKML 197
D SV+ Y++LI+ L RT++A ++L
Sbjct: 311 DRAPSVVTYNILINSLAFHGRTEQALQVL 339
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 59/287 (20%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
Y Y ++ YC G +A+ ++ +++ V E P++V L+ G F +A
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEIL--------VAELLPNVVVFGTLVDG---FCKAR 318
Query: 63 E---ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQ 119
E A + M + G+ P+ + ++ G + G + +A L EM+ +
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL---------- 368
Query: 120 PLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDV 179
LS DV+ YT LIN C + +V +A L ++ + S Y+
Sbjct: 369 NLSPDVF--------------TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414
Query: 180 LISGLDKKARTQEAKKMLLSLVYHLCTSSWP--TLTFDTLIENCSNNEFTSLVELVKGFR 237
LI G K+ ++A L L + S +TF TLI+ N
Sbjct: 415 LIHGYCKEYNMEQA----LDLCSEMTASGVEPNIITFSTLIDGYCN-------------- 456
Query: 238 IRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
+RD++ A + M PD Y LI H + N +A +Y
Sbjct: 457 VRDIK-AAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 114/299 (38%), Gaps = 52/299 (17%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
A ++++ + F + + MI +G +PD F L C G + + E+
Sbjct: 166 ACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFV--LFQC---CFKQGLYSKKEK 220
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
L+ M +G+ P+ +T + R D K+E E M
Sbjct: 221 LLD---EMTSLGIKPNVYIYTIYILDLCR--------DNKMEEAEKM------------- 256
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+ LM K G L + Y+++I+ YC G V +A L E+ + V++ L+ G
Sbjct: 257 ---FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313
Query: 184 LDKKARTQEAKKMLL---------------SLVYHLCTSSWPTLTFDTLIE----NCSNN 224
K A+ + + L++ C S L E N S +
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 225 EFTSLVELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
FT + L+ G I D EA + M + P A YN LI +C+ N ++A D+
Sbjct: 374 VFTYTI-LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 89/225 (39%), Gaps = 34/225 (15%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y L+ C + + ++A + +M ++ P S T N+LIHG
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFP--------SSATYNSLIHGYCKEYNM 425
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
E+AL++ M G+ P+ ++F+ ++ G+ + +++ A L EM
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT-------------- 471
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+G + D V YT+LI+A+ + + +A L ++ G + L+
Sbjct: 472 ----------IKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEF 226
G K+ R A S W + F LIE N +
Sbjct: 522 DGFWKEGRLSVAIDFYQENNQQ--RSCWNHVGFTCLIEGLCQNGY 564
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 21/223 (9%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +M G F A +++ F D + E S + + L+ GL GR E
Sbjct: 229 FLYNRIMDALVKNGYFDLAL-----AVYEDFKEDGLVEESTTFMI---LVKGLCKAGRIE 280
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL- 121
E LEIL+ M E PD ++TA++ G L + + EM +++A L
Sbjct: 281 EMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLV 340
Query: 122 -----------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGD 170
+++ + GKQ L+D Y LI + ADG+V A L ++L G
Sbjct: 341 VGLCKDGRVERGYELFMEMKGKQI-LIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGY 399
Query: 171 VRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLT 213
+ IY+ +I GL + +A K+ + + TL+
Sbjct: 400 IADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLS 442
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 110/285 (38%), Gaps = 53/285 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y ++G +F + + D+M+ G P+ VT N LIH G
Sbjct: 359 GHTYTTMVGNLGRAKQFGEINKLLDEMVRDGC--------KPNTVTYNRLIHSYGRANYL 410
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EA+ + M E G PD V++ ++ + G L D+ ++M + MQ L
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFL----DIAMDMYQRMQEAG------L 460
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
S D + Y+ +IN G + A L E+ G V ++++I
Sbjct: 461 SPDTF--------------TYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPT--LTFDTLIENCSNNEFTSLVELVKGFRIR 239
+ L KAR E L L + + + +T+ ++E + F
Sbjct: 507 A-LHAKARNYETA---LKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF------------- 549
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
LE EA V M N PD VY L+ + N DKA+ Y
Sbjct: 550 -LE-EAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 30 HKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSG 89
H+ FL F T P T N LIHG + ++A ++ M PD V++T+ V
Sbjct: 259 HEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEA 317
Query: 90 FFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL------SGDVYWSL-----MGKQGGLLD 138
+ + G+ R+ ++ EM E + N++ + S V +L M + G + D
Sbjct: 318 YCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPD 377
Query: 139 EVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKML 197
Y+SLI+ G A + +++T+ G R ++Y+ +IS +R + A ++L
Sbjct: 378 AKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLL 436
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 85/221 (38%), Gaps = 36/221 (16%)
Query: 20 KAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPD 79
KA + + M+ G PD T N L+ L + L M E G D
Sbjct: 523 KACELFESMMSYGVTPD--------KCTYNTLVQILASADMPHKGRCYLEKMRETGYVSD 574
Query: 80 TVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDE 139
+ + AV+S F ++G+L A ++ EM E I+P D
Sbjct: 575 CIPYCAVISSFVKLGQLNMAEEVYKEMVE-------YNIEP-----------------DV 610
Query: 140 VNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLS 199
V Y LINA+ G V +A + ++ + G SVIY+ LI K EA+ +
Sbjct: 611 VVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRK 670
Query: 200 LVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRD 240
L+ + +P D NC N ++ + K I D
Sbjct: 671 LLQSCNKTQYP----DVYTSNCMINLYSERSMVRKAEAIFD 707
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 50/273 (18%)
Query: 24 MHDQMIHKGFLPDFVTEFSP-SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVS 82
MH+ + G D + P +L+ C + GLG +A+++ M E DTVS
Sbjct: 139 MHNHIEKLGLSSDI---YVPNALIDCYSRCGGLG----VRDAMKLFEKMSER----DTVS 187
Query: 83 FTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDE--- 139
+ +++ G + GELR A L DEM Q + + L G M K L ++
Sbjct: 188 WNSMLGGLVKAGELRDARRL---FDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPE 244
Query: 140 ---VNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
V++++++ Y G++ A+ + D++ + V + ++I+G +K +EA ++
Sbjct: 245 RNTVSWSTMVMGYSKAGDMEMARVMFDKMPL--PAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 197 LLSLVYHLCTSSWPTLTFD-----TLIENCSNNEFTSLVELVKGFRIRDLENEAASVLNT 251
+ +V L FD +++ C+ + SL G RI + +
Sbjct: 303 VDQMVAS-------GLKFDAAAVISILAACTESGLLSL-----GMRIHSILKRS------ 344
Query: 252 MLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
N + V N L+ + +C N KA+D++
Sbjct: 345 ----NLGSNAYVLNALLDMYAKCGNLKKAFDVF 373
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 29/180 (16%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
AY L+ Y G KAF + + + K LV+ N ++HGLG G
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKK------------DLVSWNTMLHGLGVHGHG 397
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
+EA+E+ M G+ PD V+F AV+ G + + D M+++ L Q
Sbjct: 398 KEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYD----LVPQVE 453
Query: 122 SGDVYWSLMGKQGGLLDEVN-------------YTSLINAYCADGEVVKAKTLLDELTHF 168
L+G+ G L + + + +L+ A EV AK +LD L
Sbjct: 454 HYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKL 513
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 108/269 (40%), Gaps = 49/269 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
+ ++M Y KGE + + M+ +G P++V+ NAL+ G + A
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGL--------KPNIVSYNALMGAYAVHGMSGTA 374
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
L +L + + G+ PD VS+T +++ + R + KA ++ L M + + N+
Sbjct: 375 LSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV--------- 425
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
V Y +LI+AY ++G + +A + ++ G V L++
Sbjct: 426 ---------------VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLA-- 468
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE 244
A ++ KK+ + V S + +T N + + + EL K
Sbjct: 469 ---ACSRSKKKVNVDTVLSAAQSR--GINLNTAAYNSAIGSYINAAELEK---------- 513
Query: 245 AASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
A ++ +M K D + LI CR
Sbjct: 514 AIALYQSMRKKKVKADSVTFTILISGSCR 542
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 25/246 (10%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y NL+ G + +A + +M G PD LVT N ++ + +A
Sbjct: 216 YNNLINACGSSGNWREALEVCKKMTDNGVGPD--------LVTHNIVLSAYKSGRQYSKA 267
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE--------MMQSNNML 116
L M + PDT +F ++ ++G+ +A DL M E ++ +++
Sbjct: 268 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 327
Query: 117 AIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ + G++ + M +G + V+Y +L+ AY G A ++L ++ G +
Sbjct: 328 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 387
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
V Y L++ + + +AK++ L + + +T++ LI+ +N F L E
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN--VVTYNALIDAYGSNGF--LAE 443
Query: 232 LVKGFR 237
V+ FR
Sbjct: 444 AVEIFR 449
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 109/269 (40%), Gaps = 49/269 (18%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
+ ++M Y KGE + + M+ +G P++V+ NAL+ G + A
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGL--------KPNIVSYNALMGAYAVHGMSGTA 242
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGD 124
L +L + + G+ PD VS+T +++ + R + KA ++ L M + + N+
Sbjct: 243 LSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV--------- 293
Query: 125 VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
V Y +LI+AY ++G + +A + ++ G V L++
Sbjct: 294 ---------------VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLA-- 336
Query: 185 DKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLENE 244
A ++ KK+ + V L + + +T N + + + EL K
Sbjct: 337 ---ACSRSKKKVNVDTV--LSAAQSRGINLNTAAYNSAIGSYINAAELEK---------- 381
Query: 245 AASVLNTMLHWNDKPDGAVYNFLIVEHCR 273
A ++ +M K D + LI CR
Sbjct: 382 AIALYQSMRKKKVKADSVTFTILISGSCR 410
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 25/246 (10%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y NL+ G + +A + +M G PD LVT N ++ + +A
Sbjct: 84 YNNLINACGSSGNWREALEVCKKMTDNGVGPD--------LVTHNIVLSAYKSGRQYSKA 135
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDE--------MMQSNNML 116
L M + PDT +F ++ ++G+ +A DL M E ++ +++
Sbjct: 136 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 195
Query: 117 AIQPLSGDV-----YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDV 171
+ + G++ + M +G + V+Y +L+ AY G A ++L ++ G +
Sbjct: 196 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 255
Query: 172 RQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVE 231
V Y L++ + + +AK++ L + + +T++ LI+ +N F L E
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN--VVTYNALIDAYGSNGF--LAE 311
Query: 232 LVKGFR 237
V+ FR
Sbjct: 312 AVEIFR 317
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 29/185 (15%)
Query: 18 FSKAFH----MHDQMIHKGFLPDFVTEF-SPSLVTCNALIHGLGFFGRAEEALEILRGMP 72
FS H M + K L D +++ +P N ++H G +EA E+L+ M
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 73 EMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGK 132
GL PD ++T ++SG+ + G + +A ++ E K
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAK------------------------K 470
Query: 133 QGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQE 192
+ L V Y +LI YC E +A LL+E+ FG + Y+ LI KA E
Sbjct: 471 KHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWE 530
Query: 193 AKKML 197
++L
Sbjct: 531 KAEVL 535
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 41 FSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAY 100
P +T N+L G G+ E+AL+++ M E G+ P+ VS+TA+ SG + G R A
Sbjct: 322 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL 381
Query: 101 DLKLEMDE 108
+ ++M E
Sbjct: 382 KVFIKMQE 389
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 21/192 (10%)
Query: 12 YCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGM 71
YC GEF A + D+ + L + NA+I GL GRA EA+E+ M
Sbjct: 162 YCKAGEFENARKVFDENPER------------KLGSWNAIIGGLNHAGRANEAVEMFVDM 209
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKL--------EMDEMMQSNNMLAIQPLSG 123
GL PD + +V + +G+L A+ L E ++M N+++ + G
Sbjct: 210 KRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCG 269
Query: 124 DV-YWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLIS 182
+ S + ++ + V+++S+I Y A+G ++A ++ FG + + ++S
Sbjct: 270 RMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLS 329
Query: 183 GLDKKARTQEAK 194
+E K
Sbjct: 330 ACVHGGLVEEGK 341
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 24/192 (12%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
Y +L+ + D G +AF + ++ +G PD +V CN +IH GR EE
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPD--------IVLCNLMIHTYTRLGRFEE 335
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGEL----RKAYDLKLEMDEMMQSNNMLA-- 117
A ++ + + L PD +F +++S G+ R + + + D + + N+L+
Sbjct: 336 ARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFD--LVTGNLLSNC 393
Query: 118 IQPLSGDVY----WSLMGKQGGLLDEVNYTSLINAYCADGEVVKA----KTLLDELTHFG 169
+ + Y S+M + LD YT ++A C G A K ++ E H
Sbjct: 394 FSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLD 453
Query: 170 DVRQSVIYDVLI 181
S I D LI
Sbjct: 454 AHFHSAIIDSLI 465
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 4 AYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEE 63
A+ +++ YC G+ +A + +M +G SP LVT N LI G G+ +
Sbjct: 249 AWNSVLLAYCQNGKHEEAVELVKEMEKEGI--------SPGLVTWNILIGGYNQLGKCDA 300
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL-- 121
A+++++ M G+ D ++TA++SG G +A D+ +M N + I
Sbjct: 301 AMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS 360
Query: 122 ---------SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTH 167
G S+ K G + D + SL++ Y G++ A+ + D + +
Sbjct: 361 ACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN 415
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 115/290 (39%), Gaps = 41/290 (14%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y L+ Y G+ ++ + D M+ +G + + P++ T N L+ + EEA
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEA 207
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYD---LKLEMDEMMQSNNMLAIQPL 121
E+++ M E G+ PDTV++ + + + + GE +A K+ M E + N
Sbjct: 208 WEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPN-------- 259
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
G+ G+ ++ YC +G V + + V+++ LI
Sbjct: 260 ---------GRTCGI--------VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 182 SGLDKKARTQEAKKMLLSLV-------YHLCTSSWPTLTFDTLIENCS-NNEFTSLVELV 233
+G + ++ L+L+ L + + TL++ C+ + + ++
Sbjct: 303 NGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVM 362
Query: 234 KGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDM 283
+ +AA V M+ KPD Y+ L + R KA ++
Sbjct: 363 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL 412
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 54/215 (25%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
++++ N L+ G G +EA ++ MPE + VS+TA+V G+ G++ A L
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLF 133
Query: 104 LEMDEMMQSNNMLAIQPLSGDVYWSLM---GKQGGLLDE-------------VNYTSLIN 147
+M P V W++M Q G +D+ + TS+I+
Sbjct: 134 WKM-------------PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIH 180
Query: 148 AYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTS 207
C +G V +A+ + DE++ R + + +++G + R +A+K+
Sbjct: 181 GLCKEGRVDEAREIFDEMSE----RSVITWTTMVTGYGQNNRVDDARKI----------- 225
Query: 208 SWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDLE 242
FD + E + + L+ V+ RI D E
Sbjct: 226 ------FDVMPEKTEVSWTSMLMGYVQNGRIEDAE 254
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 107/278 (38%), Gaps = 39/278 (14%)
Query: 42 SPSLVTCNALIHGLGFFGRAE---EALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRK 98
+P L+ + + F A+ +A+E+L MP+ G PD F ++ + G ++
Sbjct: 177 NPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKD 236
Query: 99 AYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQ-------------GGLLDEVNYTSL 145
A L +M N L G W +GK G D V+YT+L
Sbjct: 237 AAKLFEDMRMRFPVNLRYFTSLLYG---WCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNL 293
Query: 146 INAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLC 205
++ Y G++ A LL ++ G + Y VLI L K R +EA K+ + + + C
Sbjct: 294 LSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYEC 353
Query: 206 TSSWPTLTF-------------------DTLIENCSNNEFTSLVELVKGFRIRDLENEAA 246
+ T T D + + +E T + +V + E E
Sbjct: 354 EADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE-ECL 412
Query: 247 SVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
++ M PD +YN +I C+ +A ++
Sbjct: 413 ELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLW 450
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 27/204 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTC-NALIHGLGFFGRAEE 63
Y NL+ Y + G+ + A+ + M +GF P+ C LI L R EE
Sbjct: 290 YTNLLSGYANAGKMADAYDLLRDMRRRGFEPN---------ANCYTVLIQALCKVDRMEE 340
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLA------ 117
A+++ M D V++TA+VSGF + G++ K Y + +D+M++ M +
Sbjct: 341 AMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY---IVLDDMIKKGLMPSELTYMH 397
Query: 118 -----IQPLSGDVYWSLMGKQGGL---LDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
+ S + LM K + D Y +I C GEV +A L +E+ G
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457
Query: 170 DVRQSVIYDVLISGLDKKARTQEA 193
+ ++I+GL + EA
Sbjct: 458 LSPGVDTFVIMINGLASQGCLLEA 481
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 127/312 (40%), Gaps = 41/312 (13%)
Query: 5 YVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEA 64
Y+ ++ C K + AF + D M G P++ +++I LG GR EA
Sbjct: 550 YLIVVNELCKKNDRDAAFAIIDAMEELGL--------RPTVAIYSSIIGSLGKQGRVVEA 601
Query: 65 LEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLE-MDEMMQSNNMLAIQPLSG 123
E M E G+ PD +++ +++ + R G + +A +L E + ++ ++ +SG
Sbjct: 602 EETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISG 661
Query: 124 DVYWSLMGKQGGLLDE----------VNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQ 173
V +M K LD+ V YT+LI + G+ + TL +
Sbjct: 662 FVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHD 721
Query: 174 SVIYDVLISGLDKKARTQEAKKMLL-----SLVYHLCTSSWPTLTFDTLIENCSNNEFTS 228
+ Y L+SGL + ++ +++++ L+ L + P ++ + + N + F
Sbjct: 722 HIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTK-PLVSIPSSLGNYGSKSFAM 780
Query: 229 LV----------------ELVKGFRIRDLENEAASVLNTMLHWNDKPDGAVYNFLIVEHC 272
V ++ G+ +EA + L +M P+ Y L+ H
Sbjct: 781 EVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHI 840
Query: 273 RCDNGDKAYDMY 284
+ + A D++
Sbjct: 841 EAGDIESAIDLF 852
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 3 YAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAE 62
+ Y +M +C + S+A ++ +M +G PD +T N LI GL GR E
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD--------QITYNTLIFGLSKAGRVE 317
Query: 63 EALEILRGMPEMGLFPDTVSFTAVVSGFFRIG 94
EA L+ M + G PDT ++T++++G R G
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 24/138 (17%)
Query: 64 ALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSG 123
AL L M E+G+ P + +T ++ G+ GEL KA ++ EM
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTV--------------- 752
Query: 124 DVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
+G L + Y S+I C GE +A LL E+ G V+Y L+
Sbjct: 753 ---------KGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGY 803
Query: 184 LDKKARTQEAKKMLLSLV 201
L K + EA+K++ +V
Sbjct: 804 LRKAGKLSEARKVIKEMV 821
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 108/285 (37%), Gaps = 53/285 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y ++G +F + D+M+ G P+ VT N LIH G
Sbjct: 364 GHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--------QPNTVTYNRLIHSYGRANYL 415
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA+ + M E G PD V++ ++ + G L D+ ++M + MQ+
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL----DIAMDMYQRMQA--------- 462
Query: 122 SGDVYWSLMGKQGGL-LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
GGL D Y+ +IN G + A L E+ G V Y+++
Sbjct: 463 ------------GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 181 ISGLDKKART-QEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
+ L KAR Q A K+ + +T+ ++E + +
Sbjct: 511 MD-LHAKARNYQNALKLYRDM--QNAGFEPDKVTYSIVMEVLGHCGY------------- 554
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
LE EA +V M N PD VY L+ + N +KA+ Y
Sbjct: 555 -LE-EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 108/285 (37%), Gaps = 53/285 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y ++G +F + D+M+ G P+ VT N LIH G
Sbjct: 364 GHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--------QPNTVTYNRLIHSYGRANYL 415
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA+ + M E G PD V++ ++ + G L D+ ++M + MQ+
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL----DIAMDMYQRMQA--------- 462
Query: 122 SGDVYWSLMGKQGGL-LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
GGL D Y+ +IN G + A L E+ G V Y+++
Sbjct: 463 ------------GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 181 ISGLDKKART-QEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
+ L KAR Q A K+ + +T+ ++E + +
Sbjct: 511 MD-LHAKARNYQNALKLYRDM--QNAGFEPDKVTYSIVMEVLGHCGY------------- 554
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
LE EA +V M N PD VY L+ + N +KA+ Y
Sbjct: 555 -LE-EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 108/285 (37%), Gaps = 53/285 (18%)
Query: 2 AYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRA 61
+ Y ++G +F + D+M+ G P+ VT N LIH G
Sbjct: 364 GHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--------QPNTVTYNRLIHSYGRANYL 415
Query: 62 EEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPL 121
EA+ + M E G PD V++ ++ + G L D+ ++M + MQ+
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL----DIAMDMYQRMQA--------- 462
Query: 122 SGDVYWSLMGKQGGL-LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVL 180
GGL D Y+ +IN G + A L E+ G V Y+++
Sbjct: 463 ------------GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 181 ISGLDKKART-QEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIR 239
+ L KAR Q A K+ + +T+ ++E + +
Sbjct: 511 MD-LHAKARNYQNALKLYRDM--QNAGFEPDKVTYSIVMEVLGHCGY------------- 554
Query: 240 DLENEAASVLNTMLHWNDKPDGAVYNFLIVEHCRCDNGDKAYDMY 284
LE EA +V M N PD VY L+ + N +KA+ Y
Sbjct: 555 -LE-EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 41/210 (19%)
Query: 78 PDTVSFTAVVSGFFRIGELRKA-----------YDLKLE-----MDEMMQSNNMLAIQPL 121
PD +++ ++ GF +G+L +A +D+ +E M+ +++ N
Sbjct: 213 PDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQF----DE 268
Query: 122 SGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLI 181
+ V++ ++ K+GG LD Y +I+ C +G + A+ + DE+ G ++ + LI
Sbjct: 269 ASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLI 328
Query: 182 SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGFRIRDL 241
GL K R EA L+E N + + L+KG
Sbjct: 329 YGLLVKRRVVEAY---------------------GLVEGVENPDISIYHGLIKGLVKIKR 367
Query: 242 ENEAASVLNTMLHWNDKPDGAVYNFLIVEH 271
+EA V M+ +P Y L+ H
Sbjct: 368 ASEATEVFRKMIQRGCEPIMHTYLMLLQGH 397
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 31/190 (16%)
Query: 43 PSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDL 102
P ++T N LI G F +EA + R M E G+ PD ++ +++SG + L + L
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 103 KLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLL 162
DEM+ S LS D+ WS Y +L++ Y G +A +L
Sbjct: 106 ---FDEMLHSG-------LSPDM-WS-------------YNTLMSCYFKLGRHGEAFKIL 141
Query: 163 DELTHFGDVRQSV-IYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPTL-TFDTLIEN 220
E H + + Y++L+ L K T A + L HL + P L T++ LI
Sbjct: 142 HEDIHLAGLVPGIDTYNILLDALCKSGHTDNA----IELFKHLKSRVKPELMTYNILING 197
Query: 221 -CSNNEFTSL 229
C + S+
Sbjct: 198 LCKSRRVGSV 207
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 32/195 (16%)
Query: 17 EFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGL 76
+ K+ + D+M+ +G PD T F+ ++++C A +G+ + A+E M G
Sbjct: 190 DLEKSEKLFDEMLERGIKPDNAT-FT-TIISC-ARQNGV-----PKRAVEWFEKMSSFGC 241
Query: 77 FPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYWSLMGKQGGL 136
PD V+ A++ + R G + D+ L + + ++ W +
Sbjct: 242 EPDNVTMAAMIDAYGRAGNV----DMALSLYDRARTEK------------WRI------- 278
Query: 137 LDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKM 196
D V +++LI Y G + +E+ G VIY+ LI + + R +AK +
Sbjct: 279 -DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKII 337
Query: 197 LLSLVYHLCTSSWPT 211
L+ + T +W T
Sbjct: 338 YKDLITNGFTPNWST 352
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 18/192 (9%)
Query: 16 GEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMG 75
G+ + DQM G PD VT ++ L C + +G +A+E++ +P G
Sbjct: 180 GKLDSCIKLFDQMKRDGLKPDVVT-YNTLLAGCIKVKNGY------PKAIELIGELPHNG 232
Query: 76 LFPDTVSFTAVVSGFFRIGELRKAYDLKLEMDEMMQSNNMLAIQPLSGDVYW-------- 127
+ D+V + V++ G +A + +M S N+ L W
Sbjct: 233 IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKAD 292
Query: 128 ---SLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISGL 184
+ M G + ++V T+L+ Y G +++ LL EL G + Y +L+ GL
Sbjct: 293 ELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGL 352
Query: 185 DKKARTQEAKKM 196
K + +EA+ +
Sbjct: 353 SKAGKLEEARSI 364
>AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22565440-22566678 REVERSE
LENGTH=412
Length = 412
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 28/253 (11%)
Query: 15 KGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGRAEEALEILRGMP-E 73
+G + A H H + I+ G + D+ PS + L GL GR ++A LRG
Sbjct: 119 QGLVNDALHFHHRCINSGQVHDY-----PSDDSFRILTKGLVHSGRLDQAEAFLRGRTVN 173
Query: 74 MGLFPDTVSFTAVVSGFFRIGELRKA------------YDLKLEMDEMMQSN--NMLAIQ 119
+PD V++ ++ GF +G +KA L D++ SN N +A
Sbjct: 174 RTTYPDHVAYNNLIRGFLDLGNFKKANLVLGEFKRLFLIALSETKDDLHHSNYENRVAFL 233
Query: 120 PLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQS-VIYD 178
+ YW GKQ ++ N L N E A LL L +G+ + + +Y
Sbjct: 234 MATFMEYWFKQGKQVEAMECYNRCVLSNRLLVCAETGNA--LLKVLLKYGEKKNAWALYH 291
Query: 179 VLI--SGLDKKARTQEAKKMLLSLVYHLCTSSWPTLTFDTLIENCSNNEFTSLVELVKGF 236
L+ +G K + K+++ + + W + +T + N++ S ++ F
Sbjct: 292 ELLDKNGTGKGCLDSDTIKIMVDECFDM---GWFSEAMETYKKARPKNDYLSDKYIITRF 348
Query: 237 RIRDLENEAASVL 249
+ +EA SV
Sbjct: 349 CENRMLSEAESVF 361
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 32 GFLPDFV-TEFSPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGF 90
G+L D T FSP L ++ L GR +E + +L M + PD V +T V+ G
Sbjct: 237 GYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGV 296
Query: 91 FRIGELRKAYDLKLEMDEMMQS----------NNMLAIQPLSGDV-YWSLMGKQGGLLDE 139
+ KA L E+ + + N + + G + S M K G +
Sbjct: 297 IADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNV 356
Query: 140 VNYTSLINAYCADGEVVKAKTLLDELTHFGDVRQSVIYDVLISG 183
V Y LI A G++ +AKTL E+ G R S +D++IS
Sbjct: 357 VTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISA 400
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
+L++ N++I G+ G+ E A+E+ + GL PD+ ++ +++SGF ++G++ +A+
Sbjct: 297 NLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFF 356
Query: 104 LEMDEMMQSNNMLAIQPL---SGDVYWSLMG---------KQGGLLDEVNYTSLINAYCA 151
M ++ ++ + L D+ W+L K D TSLI+ Y
Sbjct: 357 ERMLSVVMVPSLKCLTSLLSACSDI-WTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMK 415
Query: 152 DGEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSLVYHLCTSSWPT 211
G A+ + D + V ++V+ISG K + A ++ L P+
Sbjct: 416 CGLSSWARRIFDRFEP--KPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE---PS 470
Query: 212 L-TFDTLIENCSN 223
L TF ++ CS+
Sbjct: 471 LATFTAVLSACSH 483
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 17/170 (10%)
Query: 17 EFSKAFHMHDQMIHKGFLPDFVTEFS-----PSLVTCNALIHGLGFFGRAEEALEILRGM 71
++SK H+H + H + + + S P ++T AL+H G E A E +
Sbjct: 386 DYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENL 445
Query: 72 PEMGLFPDTVSFTAVVSGFFRIGELRKAYDLKLEMD--EMMQSNN----MLAIQPLSGD- 124
GL PD + A++ G+ G+ + L EM E+ S +L GD
Sbjct: 446 KSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDA 505
Query: 125 -----VYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFG 169
+ S+ G L Y+ + AY G+V KAK+ DE+ G
Sbjct: 506 NGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLG 555
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 47/194 (24%)
Query: 1 MAYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGR 60
+ Y +L+ Y + G+ + A+ + D+M K LV N++I+G G+
Sbjct: 155 LIYVQNSLLHLYANCGDVASAYKVFDKMPEK------------DLVAWNSVINGFAENGK 202
Query: 61 AEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR-----KAYDLKLEMDEMMQSNNM 115
EEAL + M G+ PD + +++S +IG L Y +K+ + + S+N+
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 116 LAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR-QS 174
L++ Y G V +AKTL DE+ V S
Sbjct: 263 -----------------------------LLDLYARCGRVEEAKTLFDEMVDKNSVSWTS 293
Query: 175 VIYDVLISGLDKKA 188
+I + ++G K+A
Sbjct: 294 LIVGLAVNGFGKEA 307
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 44 SLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELRKAYDLK 103
++V+ A++ G G GRAEEA++I M G+ PD + +S + L +
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 104 LE------MDEMMQSNNMLAIQPLSGDVYWSL-MGKQGGLLDEVNYTSLINAYCADGEVV 156
+ + + SN+++ + GD+ S + + + D V++T++++AY G V
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAV 454
Query: 157 KAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKK 195
+ L D++ G V +IS + ++ ++
Sbjct: 455 ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 42 SPSLVTCNALIHGLGFFGRAEEALEILRGMPEMGLFPDTVSFTAVV---SGFFRIGELRK 98
SP+ T N++I E AL + R M +FPD SFT V+ + F E R+
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 99 AYDLKLE---MDEMMQSNNMLAIQPLSGDVYWSLMGK---QGGLLDEVNYTSLINAYCAD 152
+ L ++ + ++ N ++ + SG Y+ + K + + D V++ SL++AY
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSG--YFEIARKVLDRMPVRDAVSWNSLLSAYLEK 219
Query: 153 GEVVKAKTLLDELTHFGDVRQSVIYDVLISGLDKKARTQEAKKMLLSL 200
G V +A+ L DE+ R ++ +ISG +EAK++ S+
Sbjct: 220 GLVDEARALFDEMEE----RNVESWNFMISGYAAAGLVKEAKEVFDSM 263
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 47/194 (24%)
Query: 1 MAYAYVNLMGPYCDKGEFSKAFHMHDQMIHKGFLPDFVTEFSPSLVTCNALIHGLGFFGR 60
+ Y +L+ Y + G+ + A+ + D+M K LV N++I+G G+
Sbjct: 22 LIYVQNSLLHLYANCGDVASAYKVFDKMPEK------------DLVAWNSVINGFAENGK 69
Query: 61 AEEALEILRGMPEMGLFPDTVSFTAVVSGFFRIGELR-----KAYDLKLEMDEMMQSNNM 115
EEAL + M G+ PD + +++S +IG L Y +K+ + + S+N+
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 116 LAIQPLSGDVYWSLMGKQGGLLDEVNYTSLINAYCADGEVVKAKTLLDELTHFGDVR-QS 174
L++ Y G V +AKTL DE+ V S
Sbjct: 130 -----------------------------LLDLYARCGRVEEAKTLFDEMVDKNSVSWTS 160
Query: 175 VIYDVLISGLDKKA 188
+I + ++G K+A
Sbjct: 161 LIVGLAVNGFGKEA 174