Miyakogusa Predicted Gene

Lj0g3v0226459.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0226459.1 tr|D7LZN3|D7LZN3_ARALL Signal-responsive protein
OS=Arabidopsis lyrata subsp. lyrata GN=ATSR PE=4
SV,72.88,1e-18,THREONINE DEHYDRATASE-RELATED,NULL; SER/THR
DEHYDRATASE, TRP SYNTHASE,NULL; no description,NULL,CUFF.14812.1
         (62 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G11640.1 | Symbols: ATSR, SR | serine racemase | chr4:7021770...    98   1e-21

>AT4G11640.1 | Symbols: ATSR, SR | serine racemase |
           chr4:7021770-7023252 FORWARD LENGTH=331
          Length = 331

 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 53/61 (86%)

Query: 1   MKLCFQILKVVVEPSGAIGLAAVLSDSFQKNPAWKDCNNIGIVVSGGNVDLGVLWDSLNK 60
           MK+C++ILKV VEPSGAIGLAAVLS+SF+ NP+ +DC NIGIV+SGGNVDLG LWDS   
Sbjct: 270 MKMCYEILKVSVEPSGAIGLAAVLSNSFRNNPSCRDCKNIGIVLSGGNVDLGSLWDSFKS 329

Query: 61  A 61
           +
Sbjct: 330 S 330