Miyakogusa Predicted Gene

Lj0g3v0225779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0225779.1 Non Chatacterized Hit- tr|I1MN82|I1MN82_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56481
PE,63.33,0.000000000000007, ,CUFF.14684.1
         (68 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36195.2 | Symbols:  | Serine carboxypeptidase S28 family pro...    47   4e-06
AT4G36195.3 | Symbols:  | Serine carboxypeptidase S28 family pro...    47   4e-06
AT4G36195.1 | Symbols:  | Serine carboxypeptidase S28 family pro...    47   4e-06

>AT4G36195.2 | Symbols:  | Serine carboxypeptidase S28 family
          protein | chr4:17127202-17129787 FORWARD LENGTH=477
          Length = 477

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)

Query: 16 IFLSFAAVSHGLVPPRTLLNRLSEG-RYLNSTELWFNNQTLDHFSP 60
          I LS + +S+GL+ PR + + L+E  +YL   ELWFN QTLDH+SP
Sbjct: 15 ILLSLSTLSNGLLQPRRISHGLTESSKYLTRDELWFN-QTLDHYSP 59


>AT4G36195.3 | Symbols:  | Serine carboxypeptidase S28 family
          protein | chr4:17127202-17129787 FORWARD LENGTH=488
          Length = 488

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)

Query: 16 IFLSFAAVSHGLVPPRTLLNRLSEG-RYLNSTELWFNNQTLDHFSP 60
          I LS + +S+GL+ PR + + L+E  +YL   ELWFN QTLDH+SP
Sbjct: 15 ILLSLSTLSNGLLQPRRISHGLTESSKYLTRDELWFN-QTLDHYSP 59


>AT4G36195.1 | Symbols:  | Serine carboxypeptidase S28 family
          protein | chr4:17127202-17129787 FORWARD LENGTH=488
          Length = 488

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 2/46 (4%)

Query: 16 IFLSFAAVSHGLVPPRTLLNRLSEG-RYLNSTELWFNNQTLDHFSP 60
          I LS + +S+GL+ PR + + L+E  +YL   ELWFN QTLDH+SP
Sbjct: 15 ILLSLSTLSNGLLQPRRISHGLTESSKYLTRDELWFN-QTLDHYSP 59