Miyakogusa Predicted Gene

Lj0g3v0224699.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0224699.1 Non Chatacterized Hit- tr|I1NKT9|I1NKT9_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,38.97,0.000000000002, ,CUFF.14637.1
         (153 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32620.2 | Symbols:  | Enhancer of polycomb-like transcriptio...    65   1e-11
AT4G32620.1 | Symbols:  | Enhancer of polycomb-like transcriptio...    65   1e-11

>AT4G32620.2 | Symbols:  | Enhancer of polycomb-like transcription
            factor protein | chr4:15731968-15737222 FORWARD
            LENGTH=1540
          Length = 1540

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 84/149 (56%), Gaps = 27/149 (18%)

Query: 1    MRYYSASNDGYYRNHNPKSHRSKSKKFGSYMYQNVAQTTAYNQRMSLSGKRNGVTRWNMG 60
            M Y+S+  +GY+RNH  KS R                         ++GKRN   RW+ G
Sbjct: 1407 MGYFSSGGNGYHRNHQNKSQR-------------------------INGKRNTSERWDAG 1441

Query: 61   DYDLPGHRQYLL-DGPQRHGIEQM-DGSDHDEFKLRDASGAAQHARKMAQLKRQRAQRLH 118
              + P        +G QR  +E + + +D DE+KLRDA+GAA+ A  +A+LKR+RA+ L 
Sbjct: 1442 YSECPSSNLVCYSNGSQRPDVEGIRNSTDIDEYKLRDAAGAARRACALAKLKRERAESLR 1501

Query: 119  YRADLAIHKAVVALMAAEAMKGSEDSVGD 147
            Y+ADLAI KA  ALM AEA+K S + +G+
Sbjct: 1502 YKADLAIQKAAAALMCAEAVKASSEDLGN 1530


>AT4G32620.1 | Symbols:  | Enhancer of polycomb-like transcription
            factor protein | chr4:15731968-15737222 FORWARD
            LENGTH=1539
          Length = 1539

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 84/149 (56%), Gaps = 27/149 (18%)

Query: 1    MRYYSASNDGYYRNHNPKSHRSKSKKFGSYMYQNVAQTTAYNQRMSLSGKRNGVTRWNMG 60
            M Y+S+  +GY+RNH  KS R                         ++GKRN   RW+ G
Sbjct: 1406 MGYFSSGGNGYHRNHQNKSQR-------------------------INGKRNTSERWDAG 1440

Query: 61   DYDLPGHRQYLL-DGPQRHGIEQM-DGSDHDEFKLRDASGAAQHARKMAQLKRQRAQRLH 118
              + P        +G QR  +E + + +D DE+KLRDA+GAA+ A  +A+LKR+RA+ L 
Sbjct: 1441 YSECPSSNLVCYSNGSQRPDVEGIRNSTDIDEYKLRDAAGAARRACALAKLKRERAESLR 1500

Query: 119  YRADLAIHKAVVALMAAEAMKGSEDSVGD 147
            Y+ADLAI KA  ALM AEA+K S + +G+
Sbjct: 1501 YKADLAIQKAAAALMCAEAVKASSEDLGN 1529