Miyakogusa Predicted Gene

Lj0g3v0224269.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0224269.1 tr|H2KWA6|H2KWA6_ORYSJ Saccharopine dehydrogenase
family protein, expressed OS=Oryza sativa subsp.
j,68.66,2e-19,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
NAD(P)-binding Rossmann-fold domains,NULL; seg,NULL;,CUFF.14591.1
         (163 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50450.1 | Symbols:  | Saccharopine dehydrogenase  | chr1:186...   182   1e-46

>AT1G50450.1 | Symbols:  | Saccharopine dehydrogenase  |
           chr1:18687902-18690348 REVERSE LENGTH=428
          Length = 428

 Score =  182 bits (461), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 86/112 (76%), Positives = 98/112 (87%)

Query: 52  LSNLCPSLQILVAGRNREKGEALVAKLGGNSGFARVDINDANSLETALKDVDLVVHAAGP 111
           LS LCP L+I+V GRNREKGEA+VAKLG NS F++VDINDA  LET+L+DVDLVVHAAGP
Sbjct: 58  LSKLCPELKIVVGGRNREKGEAMVAKLGENSEFSQVDINDAKMLETSLRDVDLVVHAAGP 117

Query: 112 FQQAERCTVLEAAINTKTAYLDVCDDTTYASRAKSFMDQALAANVPAITTGG 163
           FQQA RCTVLEAAI TKTAYLDVCDDT+YA RAKS   +A+AAN+PA+TT G
Sbjct: 118 FQQAPRCTVLEAAIKTKTAYLDVCDDTSYAFRAKSLEAEAIAANIPALTTAG 169