Miyakogusa Predicted Gene
- Lj0g3v0224259.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0224259.1 Non Chatacterized Hit- tr|I1ND38|I1ND38_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,39.16,1e-18,seg,NULL;
PPR: pentatricopeptide repeat domain,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide rep,CUFF.14586.1
(152 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 82 1e-16
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 78 2e-15
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-15
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 9e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-13
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 1e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 71 2e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 7e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-13
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 69 1e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-12
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 67 4e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 67 5e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 6e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-12
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 7e-12
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-12
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-11
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-11
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-11
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-11
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-11
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-11
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-11
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-11
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-11
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-11
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 8e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-10
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 61 3e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-10
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 61 3e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-10
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 60 6e-10
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 60 6e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 8e-10
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-09
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-09
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 58 2e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 58 2e-09
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-09
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 57 5e-09
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 7e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-08
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 55 1e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 5e-08
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-08
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 53 8e-08
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-08
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-08
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 53 9e-08
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 52 2e-07
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 52 2e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-07
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-07
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-07
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-07
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 50 6e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-07
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 49 9e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 49 9e-07
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 49 1e-06
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 48 2e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 2e-06
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 3e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 4e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 7e-06
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 8e-06
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 8e-06
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 8e-06
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 9e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ +M KG+EPN S N VI GLCRE R KE V EM R+G++ DE TY +LI C
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ +A + EM+ G +PSV+ Y LI + C G
Sbjct: 322 K-EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M EKG++P++ + + +IQG C + RTKEA +++EEM R G PDE TYT+LI+ C D
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+KA ++ EM+++G P VV Y+ LI
Sbjct: 536 -LEKALQLHNEMVEKGVLPDVVTYSVLING 564
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ + M G+ P+ + +I +C+ A E ++M+ +G P+E+TYT+L+D
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD--- 388
Query: 107 DYDDK--TDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ K ++A +VLREM D GFSPSVV YN LI +C G
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M + G P+ + N +I G C + ++A V E+MK KG +PD +Y++++ C
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 107 -DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
YD D+A +V REM+++G P + Y+ LI+ +C
Sbjct: 462 RSYD--VDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
++ M EKG+ P+ S + V+ G CR + EA V EM KG PD TY+SLI
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
C+ +T +A + EM+ G P Y LI AYC G
Sbjct: 496 CE-QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 38 ISAKKKVA---GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPD 94
I +K+ ++ + M E V PN + N +I+G C A +F++M+ KG P+
Sbjct: 180 IRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPN 239
Query: 95 EKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
TY +LID C K D K+LR M +G P+++ YN +I C
Sbjct: 240 VVTYNTLIDGYCKL-RKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSAM------TEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L P T +I + K + AM +G+ PN + ++ G ++ EA
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
V EM GF+P TY +LI+ C K + A VL +M ++G SP VV Y+ ++
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHC-VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 141 YC 142
+C
Sbjct: 460 FC 461
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 27 LEPESWPNTMMISAK------KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L P+ + T +I+A +K L + M EKGV P+ + + +I GL ++ RT+EA+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKT--------------DKADKVLREMIDRG 126
+ ++ + P + TY +LI+ + + K+ +AD+V M+ +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 127 FSPSVVEYNKLIRAYCCYG 145
P YN +I +C G
Sbjct: 636 HKPDGTAYNIMIHGHCRAG 654
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 80.1 bits (196), Expect = 6e-16, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
++V + M E+G EP+ + N ++ CR R KEA +++ M R+ PD TYTSL
Sbjct: 253 REVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSL 312
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
I LC D + +A + M+DRG P + YN LI AYC G Q K
Sbjct: 313 IKGLCK-DGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK 361
Score = 46.2 bits (108), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+V+ M R G P+ T+ L ++ C+ D + D L +M + GF P +V YN L+ +
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCN-DSNFREVDDFLEKMEEEGFEPDLVTYNTLVSS 280
Query: 141 YCCYG 145
YC G
Sbjct: 281 YCRRG 285
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L +T KG+ P+ + N +IQGLC + A E+FEEM+ KG PDE TY LID LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K D+A +L++M G + SV+ YN LI +C
Sbjct: 447 S-KGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K +M M ++G +P+ + N VI GLC+ KEA EV ++M + +P+ TY +L
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
I LC +++ ++A ++ R + +G P V +N LI+ C
Sbjct: 372 ISTLCK-ENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 53 EKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKT 112
+ G P+ + N ++ GLC+ K A E+ + M ++G+ PD TY S+I LC +
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE-V 346
Query: 113 DKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+A +VL +MI R SP+ V YN LI C
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 7/121 (5%)
Query: 28 EPESWPNTMMISA---KKKV---AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEE 81
EP+ + M+I + K K+ ++ M G + + N +I G C+ +T+EAEE
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 82 VFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+F+EM+ G + + TY +LID LC + + A +++ +MI G P YN L+ +
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCK-SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 142 C 142
C
Sbjct: 551 C 551
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M GV NS + N +I GLC+ R ++A ++ ++M +G PD+ TY SL+ C D
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
AD +++ M G P +V Y LI C G
Sbjct: 556 IKKAAD-IVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRK-GFAPDEKTYTSLIDLLCDYD 109
M E G ++ S+N ++ G C+E R ++A +EM + GF PD+ T+ +L++ LC
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA- 308
Query: 110 DKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
A +++ M+ G+ P V YN +I C G
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M+ G++P+ + N +I+ LCR + + A + E+M G PDEKT+T+++ + D
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D A ++ +M++ G S S V N ++ +C G
Sbjct: 240 -LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEG 273
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
KK A ++ AMT G EP+ + +I GLC+ R + A ++ ++ KG Y +
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFS-PSVVEYNKLIRAYCCYG 145
I L KT +A + REM+++ + P V Y + R C G
Sbjct: 617 IQGLF-RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A LM M +G +P+ + N ++ CR K+A ++ + M G PD TY +LI
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
LC + + A K+LR + +G + + YN +I+
Sbjct: 585 LCKA-GRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
Query: 28 EPESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEE 81
+P + T+++ K+ +++ M+ G++PN+ N +I C+E R EA E
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 82 VFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+F EM RKG PD T+ SLI LC+ D+ A +LR+MI G + V YN LI A+
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDE-IKHALWLLRDMISEGVVANTVTYNTLINAF 539
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ MT+ G PNS +I L + R EA ++ EEM G PD +T+ +I LC
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
+ D+ ++A K++ M+ RGF+P + Y L+ C G K
Sbjct: 299 KF-DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I GF G L+ AK A L +T G+ P+ + N +I G +E
Sbjct: 360 IHGFVTHGRLD----------DAK---AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
A EV +M+ KG P+ +YT L+D C K D+A VL EM G P+ V +N L
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKL-GKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 138 IRAYC 142
I A+C
Sbjct: 466 ISAFC 470
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M G P++++ N+VI GLC+ R EA ++ M +GFAPD+ TY L++ LC
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K + D +++ R P +V +N LI + +G
Sbjct: 334 ----KIGRVDAA-KDLFYRIPKPEIVIFNTLIHGFVTHG 367
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K+ L++ M +G + + N +I+GLCR +A +FE+M R G AP + L
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
I+ LC ++A + +EM+ RG +P +V +N LI C G
Sbjct: 606 INGLCR-SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K L+ M +GV N+ + N +I R KEA ++ EM +G DE TY SL
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
I LC + DKA + +M+ G +PS + N LI C
Sbjct: 571 IKGLCRAGE-VDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M KG +PN S ++ G C+ + EA V EM G P+ + LI C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ + +A ++ REM +G P V +N LI C
Sbjct: 471 K-EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L M G P++ S N +I GLCR +EA E +EM +G PD T+ SLI
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
+ LC + + + R++ G P V +N L+ C G+
Sbjct: 642 NGLCR-AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E+GV N + N +I GLCRE + EA +V ++MK G P+ TY +LID C
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG- 352
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K KA + R++ RG SPS+V YN L+ +C
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 40 AKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYT 99
KK+ + M E GV PN + N V+ LC++ RTK+A +VF+EM+ +G + + TY
Sbjct: 248 VKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307
Query: 100 SLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+LI LC + K ++A+KV+ +M G +P+++ YN LI +C G
Sbjct: 308 TLIGGLCR-EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L +M EK EPN N +I G C+E + A ++ +EM+ K AP+ +Y +I++LC
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ K+ +A++++ +MID G PS + + RA
Sbjct: 525 K-ERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L + +G+ P+ + N ++ G CR+ T A ++ +EM+ +G P + TYT LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D D +KA ++ M + G P V Y+ LI +C G
Sbjct: 416 DTFAR-SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M G+ PN + N +I G C + +A + ++K +G +P TY L+ C
Sbjct: 325 VVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
D T A K+++EM +RG PS V Y LI +
Sbjct: 385 RKGD-TSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 36/131 (27%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI---- 102
L+ +TE G PN +I G C++ ++A+++F EM + G +E+TYT LI
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 103 -------------------------------DLLCDYDDKTDKADKVLREMIDRGFSPSV 131
+ LC D +T A +V EM +RG S ++
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK-DGRTKDAFQVFDEMRERGVSCNI 303
Query: 132 VEYNKLIRAYC 142
V YN LI C
Sbjct: 304 VTYNTLIGGLC 314
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K L +M E G+ P+ + + +I G C + + EA +F+ M K P+E Y ++
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
I C + + +A K+L+EM ++ +P+V Y +I C
Sbjct: 485 ILGYCK-EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A ++ M E+G++P+ + +I R ++A ++ M+ G PD TY+ LI
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
C + ++A ++ + M+++ P+ V YN +I YC
Sbjct: 453 FC-IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
KV L+ M KG++PNS +I LCR + EAEE F EM R+G PD YT+LI
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D C D A K EM R +P V+ Y +I +C G
Sbjct: 359 DGFCKRGD-IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M + G++PN + N ++ GLC+ +EA ++ E + G D TYT+L+D C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ DKA ++L+EM+ +G P++V +N L+ +C +G
Sbjct: 538 K-SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+ P+ T +IS ++ ++ A M KG+EP+S + E+I G C+ K+A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
V M + G +P+ TYT+LID LC D D A+++L EM G P++ YN ++
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 141 YCCYG 145
C G
Sbjct: 501 LCKSG 505
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGL------MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L+P S+ +I ++ L S M +G+ P++ +I G C+ + A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ F EM + PD TYT++I C D + A K+ EM +G P V + +LI
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE-AGKLFHEMFCKGLEPDSVTFTELING 430
Query: 141 YCCYGY 146
YC G+
Sbjct: 431 YCKAGH 436
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K+ L+ M KG P+ S + V+ G CR + ++ E MKRKG P+ Y S+
Sbjct: 263 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 322
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
I LLC K +A++ EMI +G P V Y LI +C G
Sbjct: 323 IGLLCRI-CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M KG+ PN+ + N +++ C K A ++++M +G PD KTY +L+ C
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ + A + +EM +GFS SV Y+ LI+ +
Sbjct: 643 KARNMKE-AWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 21 FAAAGSLEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREW 74
F AAG L ++ T ++ A K ++ M KG++P + N ++ G C
Sbjct: 517 FEAAG-LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 75 RTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEY 134
++ E++ M KG AP+ T+ SL+ C + A + ++M RG P Y
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC-IRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 135 NKLIRAYC 142
L++ +C
Sbjct: 635 ENLVKGHC 642
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 53 EKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKT 112
E GV N S N VI +C+ R KEA + M+ KG+ PD +Y+++++ C + +
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE-L 297
Query: 113 DKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
DK K++ M +G P+ Y +I C
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
KV L+ M KG++PNS +I LCR + EAEE F EM R+G PD YT+LI
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D C D A K EM R +P V+ Y +I +C G
Sbjct: 359 DGFCKRGD-IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M + G++PN + N ++ GLC+ +EA ++ E + G D TYT+L+D C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ DKA ++L+EM+ +G P++V +N L+ +C +G
Sbjct: 538 K-SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+ P+ T +IS ++ ++ A M KG+EP+S + E+I G C+ K+A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
V M + G +P+ TYT+LID LC D D A+++L EM G P++ YN ++
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 141 YCCYG 145
C G
Sbjct: 501 LCKSG 505
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGL------MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L+P S+ +I ++ L S M +G+ P++ +I G C+ + A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ F EM + PD TYT++I C D + A K+ EM +G P V + +LI
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE-AGKLFHEMFCKGLEPDSVTFTELING 430
Query: 141 YCCYGY 146
YC G+
Sbjct: 431 YCKAGH 436
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K+ L+ M KG P+ S + V+ G CR + ++ E MKRKG P+ Y S+
Sbjct: 263 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 322
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
I LLC K +A++ EMI +G P V Y LI +C G
Sbjct: 323 IGLLCRI-CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M KG+ PN+ + N +++ C K A ++++M +G PD KTY +L+ C
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ + A + +EM +GFS SV Y+ LI+ +
Sbjct: 643 KARNMKE-AWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 21 FAAAGSLEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREW 74
F AAG L ++ T ++ A K ++ M KG++P + N ++ G C
Sbjct: 517 FEAAG-LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 75 RTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEY 134
++ E++ M KG AP+ T+ SL+ C + A + ++M RG P Y
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC-IRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 135 NKLIRAYC 142
L++ +C
Sbjct: 635 ENLVKGHC 642
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 53 EKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKT 112
E GV N S N VI +C+ R KEA + M+ KG+ PD +Y+++++ C + +
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE-L 297
Query: 113 DKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
DK K++ M +G P+ Y +I C
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A L+ M ++ + PN + + +I +E + +EAEE+ +EM +G APD TYTSLID
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
C ++ DKA++++ M+ +G P++ +N LI YC
Sbjct: 378 FCK-ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K ++ M KG +PN + N +I G C+ R + E+F +M +G D TY +LI
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
C+ K + A ++ +EM+ R P++V Y L+ C
Sbjct: 446 QGFCEL-GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
M + + G EPN+ + + +I GLC E R EA E+ + M G PD T +L++ LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC- 204
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K +A ++ +M++ G P+ V Y ++ C G
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 30 ESWPNTMMISAKKKVAGLM-SAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR 88
+ N + +S K+ A L+ M E G +PN+ + V+ +C+ +T A E+ +M+
Sbjct: 197 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 89 KGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D Y+ +ID LC + D A + EM +G + +++ YN LI +C G
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHG-SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 312
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 34 NTMMISAKKKVAG-LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFA 92
N M S + +A L+ M E+ ++ ++ + +I GLC+ A +F EM+ KG
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 93 PDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ TY LI C+ + D K+LR+MI R +P+VV ++ LI ++
Sbjct: 296 TNIITYNILIGGFCNA-GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 20 GFAAAGSLEPESW-PNTMMISA----------KKKVAGLMSAMTEKGVEPNSDSLNEVIQ 68
F+A G + + PNT+ S + L+ M E G +P+ ++N ++
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 69 GLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFS 128
GLC + EA + ++M G P+ TY +++++C +T A ++LR+M +R
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK-SGQTALAMELLRKMEERNIK 260
Query: 129 PSVVEYNKLIRAYCCYG 145
V+Y+ +I C +G
Sbjct: 261 LDAVKYSIIIDGLCKHG 277
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L ++ KGV+P + N +I GLC++ EAE +F +M+ G APD TY LI
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Query: 107 DYDDKTDKADKVLREMIDRGFS 128
D T K+ K++ E+ GFS
Sbjct: 590 GDGDAT-KSVKLIEELKRCGFS 610
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K+ L+ M G+ P++ + N +I R +EA +VFEEMK GF+ D+ TY +L
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+D+ + +A KVL EM+ GFSPS+V YN LI AY
Sbjct: 321 LDVYGK-SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
S + E+G P+ +LN ++ R +A V + MK +GF P TY SL+ +
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D K++++LRE++ +G P ++ YN +I AYC
Sbjct: 677 SAD-FGKSEEILREILAKGIKPDIISYNTVIYAYC 710
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ + KG++P+ S N VI CR R ++A +F EM+ G PD TY + I
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D ++A V+R MI G P+ YN ++ YC
Sbjct: 746 A-DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC 780
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K G++ M E+G P+ + N ++ R ++EE+ E+ KG PD +Y ++I
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCC 143
C + + A ++ EM + G P V+ YN I +Y
Sbjct: 707 YAYCR-NTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA 746
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 40 AKKKVAGLMSAMTEKG----VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDE 95
A K GLM ++ E+ +EP + L ++ + EAE F E+K +GF+PD
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 96 KTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
T S++ + KA+ VL M +RGF+PS+ YN L+
Sbjct: 630 TTLNSMVSIY-GRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G+ P+ + N ++ + E VF+EMKR GF P+ +T+ +LI ++
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS-FEQ 507
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRA 140
A V R M+D G +P + YN ++ A
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAA 533
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K+ +++ M G P+ + N +I R+ EA E+ +M KG PD TYT+L
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ + K + A + EM + G P++ +N I+ Y G
Sbjct: 391 LSGF-ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
IRGF AG W + A L+ M ++ + P+ + + +I +E + +
Sbjct: 289 IRGFCYAGR-----WDDG---------AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
EAEE+ +EM ++G +PD TYTSLID C +++ DKA+ +L M+ +G P++ +N L
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCK-ENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 138 IRAYC 142
I YC
Sbjct: 394 INGYC 398
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M E+ ++ ++ + +I GLC++ A +F EM+ KGF D YT+LI C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
Y + D K+LR+MI R +P VV ++ LI +
Sbjct: 294 -YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K ++ M KG PN + N +I G C+ + E+F +M +G D TY +LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
C+ K + A ++ +EM+ R P +V Y L+ C
Sbjct: 430 QGFCEL-GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M E G +PN + V++ +C+ +T A E+ +M+ + D Y+ +ID LC
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D D A + EM +GF ++ Y LIR +C G
Sbjct: 259 K-DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
M + + G EP++ + + +I GLC E R EA E+ + M G P T +L++ LC
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLC- 188
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ K A ++ M++ GF P+ V Y +++ C G
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M E G +P +LN ++ GLC + +A + + M GF P+E TY ++ ++C
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+T A ++LR+M +R V+Y+ +I C
Sbjct: 224 K-SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 64 NEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMI 123
N +I G+C + +A ++F + KG PD KTY +I LC ++ AD + R+M
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE-ADLLFRKME 554
Query: 124 DRGFSPSVVEYNKLIRAY 141
+ G SP+ YN LIRA+
Sbjct: 555 EDGHSPNGCTYNILIRAH 572
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M+ +GV ++ + N +IQG C + + A+E+F+EM + PD +Y L+D LC
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D + + +KA ++ ++ + YN +I C
Sbjct: 469 D-NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 44 VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLID 103
V L M KG+ N +L+ +I CR + A ++ + G+ PD T+++LI+
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 104 LLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC + + +A +++ M++ G P+++ N L+ C G
Sbjct: 151 GLC-LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L ++ KGV+P+ + N +I GLC++ EA+ +F +M+ G +P+ TY LI
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573
Query: 107 DYDDKTDKADKVLREMIDRGFS 128
D T K+ K++ E+ GFS
Sbjct: 574 GEGDAT-KSAKLIEEIKRCGFS 594
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 29 PESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P S +++I +V GL M EKG +P++ + +I+ LC +A +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
F+EM +G P+ TYT LID LC D K ++A+ V R+M+ PSV+ YN LI YC
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCR-DGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
KV +MS E PNS S + +I GLC R +EA + ++M KG P +TYT LI
Sbjct: 251 KVFDVMSK--EVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
LCD DKA + EMI RG P+V Y LI C
Sbjct: 309 KALCD-RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
G+ M + + P+ + N +I G C++ R A E+ M+++ P+ +T+ L++ L
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQT 149
C K KA +L+ M+D G SP +V YN LI C G+ T
Sbjct: 417 CRVG-KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M ++ +PN + NE+++GLCR + +A + + M G +PD +Y LID LC
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ + A K+L M P + + +I A+C
Sbjct: 453 R-EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M G PN +I GLC+ R +EAE++ M+ G +P+ TYT ++
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ + K D+A + +R M++RG+ + Y+ L++ +
Sbjct: 663 N-NGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L+ M + G+ P+ S N +I GLCRE A ++ M PD T+T++I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ C K D A L M+ +G S V LI C G
Sbjct: 484 NAFCK-QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG 525
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
++ + + G+ P+ + ++ GL R + + E MK G P+ YT +I+ L
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGL 626
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
C + + ++A+K+L M D G SP+ V Y +++ Y
Sbjct: 627 CQF-GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M E+ + PN + N +I +E + EAE++++EM ++ PD TY+SLI+ C
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D+ D+A + MI + P+VV YN LI +C
Sbjct: 377 MH-DRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M +E N + VI LC+ +A +F EM+ KG P+ TY+SLI LC
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+Y+ +D A ++L +MI+R +P+VV +N LI A+
Sbjct: 307 NYERWSD-ASRLLSDMIERKINPNVVTFNALIDAF 340
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M K PN + N +I G C+ R E E+F EM ++G + TYT+LI D
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D A V ++M+ G P+++ YN L+ C
Sbjct: 451 -CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M KGV PN + + +I LC R +A + +M + P+ T+ +LID
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
+ K +A+K+ EMI R P + Y+ LI +C +
Sbjct: 342 K-EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
L+ M + G EP+ +L+ ++ G C R +A + ++M G+ PD T+T+LI L
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ +K +A ++ M+ RG P++V Y ++ C
Sbjct: 201 FLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M ++G +PN + V+ GLC+ A + +M+ + Y+++ID
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
LC Y + D A + EM ++G P+V+ Y+ LI C Y
Sbjct: 270 LCKYRHE-DDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M GV PN + N ++ GLC+ + ++A VFE ++R P TY +I+ +C
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D + + +G P V+ YN +I +C
Sbjct: 521 VEDGWD-LFCSLSLKGVKPDVIIYNTMISGFC 551
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ + + GV PN N +I LC+ + EAE +F+ M + G P++ TY+ LID+ C
Sbjct: 354 LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC 413
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K D A L EM+D G SV YN LI +C +G
Sbjct: 414 R-RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 54 KGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTD 113
KG+ N+ + N +I+G CR+ R +EA E+ M G +PD TYT++I+ LC +D
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND-VK 839
Query: 114 KADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
KA ++ M ++G P V YN LI C G
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 26 SLEPESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
L+P+ T MI AK K G+ M +G PN + VI GLC+ EA
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
E + +M+ P++ TY +D+L + KA + L I +G + YN LIR
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE-LHNAILKGLLANTATYNMLIR 795
Query: 140 AYCCYG 145
+C G
Sbjct: 796 GFCRQG 801
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L MT KG+ P+ + ++ GL R ++A ++F EM P+ TY +I
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+ C+ D + KA + L+EM ++G P Y LI C G K+
Sbjct: 550 EGYCEEGDMS-KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 26 SLEPESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
L+ +P +I+ K G M+ M K +EP + ++ G C + + +A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
++ EM KG AP T+T+L+ L D A K+ EM + P+ V YN +I
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD-AVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 140 AYC 142
YC
Sbjct: 551 GYC 553
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M E V+PN + N +I+G C E +A E +EM KG PD +Y LI LC
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
T +A + + +D G E N++ +G+C+ KL
Sbjct: 589 ----LTGQASEA-KVFVD-GLHKGNCELNEICYTGLLHGFCREGKL 628
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ MTEKG+ P++ S +I GLC + EA+ + + + +E YT L+ C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
+ K ++A V +EM+ RG +V Y LI
Sbjct: 624 R-EGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
IRGF G +E S L++ M GV P+ + +I LCR K
Sbjct: 794 IRGFCRQGRIEEASE--------------LITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPS 130
+A E++ M KG PD Y +LI C + KA ++ EM+ +G P+
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCC-VAGEMGKATELRNEMLRQGLIPN 891
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M E+ + PN + N +I +E + EAE++F+EM ++ P+ TY SLI+ C
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D+ D+A ++ M+ + P VV YN LI +C
Sbjct: 357 MH-DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M + +E + + VI LC+ +A +F EM KG PD TY+SLI LC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+Y +D A ++L +M++R +P+VV +N LI A+
Sbjct: 287 NYGRWSD-ASRLLSDMLERKINPNVVTFNSLIDAF 320
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M KG+ P+ + + +I LC R +A + +M + P+ T+ SLID
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
+ K +A+K+ EMI R P++V YN LI +C +
Sbjct: 322 K-EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ + M K P+ + N +I G C+ + + E+F +M R+G + TYT+LI
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D D A V ++M+ G P+++ YN L+ C G
Sbjct: 427 QASD-CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
++ M + G P+ +LN ++ G C R EA + ++M G+ PD T+T+L+ L
Sbjct: 121 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 180
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ +K +A ++ M+ +G P +V Y +I C
Sbjct: 181 FQH-NKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M GV PN + N ++ GLC+ + ++A VFE +++ PD TY + + +C
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D + + +G P V+ YN +I +C
Sbjct: 501 VEDGWD-LFCSLSLKGVKPDVIAYNTMISGFC 531
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 36/136 (26%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKT------- 97
L+ M E G +P++ + ++ GL + + EA + E M KG PD T
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 98 ----------------------------YTSLIDLLCDYDDKTDKADKVLREMIDRGFSP 129
Y+++ID LC Y D A + EM ++G P
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY-RHVDDALNLFTEMDNKGIRP 273
Query: 130 SVVEYNKLIRAYCCYG 145
V Y+ LI C YG
Sbjct: 274 DVFTYSSLISCLCNYG 289
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++S MT++ + P+ + N +I +E R EAEE +EEM R+ PD TY+ LI LC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
Y + D+A+++ M+ +G P VV Y+ LI YC
Sbjct: 303 MY-SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 20 GFAAAGSLEPESWPNTMMISA---KKKVAG---LMSAMTEKGVEPNSDSLNEVIQGLCRE 73
GF + P+ +++I+ KKV L M+++GV N+ + +IQG CR
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 74 WRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVE 133
+ AEE+F M G P+ TY L+ LCD + K +KA +L +M G +V
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD-NGKIEKALVILADMQKNGMDADIVT 433
Query: 134 YNKLIRAYC 142
YN +IR C
Sbjct: 434 YNIIIRGMC 442
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M + G EP+ + ++ G CR R +A +F++M G+ P+ Y ++ID LC
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D A +L M G P VV YN LI C G
Sbjct: 198 K-SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M + G+ P+ + N +I GLC R +A + M ++ PD T+ +LID C
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA-C 266
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
+ + +A++ EMI R P +V Y+ LI C Y
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 26 SLEPESWPNTMMI------SAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
SL+P+ +++I S + + M KG P+ + + +I G C+ + +
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
++F EM ++G + TYT LI C K + A+++ R M+ G P+++ YN L+
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCR-AGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 140 AYC 142
C
Sbjct: 405 GLC 407
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M G +PN N +I GLC+ + A ++ M++ G PD TY SLI LC
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+D A +++ M R P V +N LI A
Sbjct: 233 SSGRWSD-ATRMVSCMTKREIYPDVFTFNALIDA 265
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M EK + PN + N +I +E + EAE+++++M ++ PD TY SL++ C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D+ DKA ++ M+ + P VV YN LI+ +C
Sbjct: 377 MH-DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M +E + N +I LC+ +A +F+EM+ KG P+ TY+SLI LC
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG-YCQTQKL 152
Y +D A ++L +MI++ +P++V +N LI A+ G + + +KL
Sbjct: 307 SYGRWSD-ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M K P+ + N +I+G C+ R ++ E+F EM +G D TYT+LI L +D
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF-HDG 449
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D A KV ++M+ G P ++ Y+ L+ C G
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M ++G +PN + V+ GLC+ T A + +M+ D + ++ID
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC Y D A + +EM +G P+VV Y+ LI C YG
Sbjct: 270 LCKY-RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M KG+ PN + + +I LC R +A ++ +M K P+ T+ +LID
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
+ K +A+K+ +MI R P + YN L+ +C +
Sbjct: 342 K-EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
L+ M + G EP+ +L+ ++ G C R +A + ++M G+ PD T+T+LI L
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ +K +A ++ M+ RG P++V Y ++ C
Sbjct: 201 FLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M ++ ++P+ + N ++ G C R +A+++FE M K PD TY +LI C
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK-SK 414
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
+ + ++ REM RG V Y LI+ G C +
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M GV P+ + + ++ GLC + ++A EVF+ M++ D YT++I+ +C
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA-G 519
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K D + + +G P+VV YN +I C
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M E+ V P+ DS +IQG CR+ + A E+ ++M KGF PD +LI LC
Sbjct: 212 LFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLC 267
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D D+ K L EMI +GFSP N L++ +C +G
Sbjct: 268 D-QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFG 305
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A L+S M +K + PN + + ++ + + EA+E+FEEM R PD TY+SLI+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
LC + D+ D+A+++ M+ +G VV YN LI +C
Sbjct: 305 LCLH-DRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M E G +P+ + N +I LC+ R +A + F+E++RKG P+ TYT+L++
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
LC+ +D A ++L +MI + +P+V+ Y+ L+ A+
Sbjct: 235 LCNSSRWSDAA-RLLSDMIKKKITPNVITYSALLDAF 270
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M + G EP+ ++ ++ G CR R +A + ++M G+ PD Y ++ID LC
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D +E+ +G P+VV Y L+ C
Sbjct: 202 KTKRVNDAFD-FFKEIERKGIRPNVVTYTALVNGLC 236
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M+++G+ N+ + N +IQG + +A+E F +M G +PD TY L+ LC
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D + + +KA + +M R +V Y +IR C G
Sbjct: 412 D-NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M KG + S N +I G C+ R ++ ++F EM ++G + TY +LI
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D DKA + +M G SP + YN L+ C
Sbjct: 377 QAGD-VDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 15/128 (11%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I+GF AG ++ K S M G+ P+ + N ++ GLC +
Sbjct: 372 IQGFFQAGDVD--------------KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
+A +FE+M+++ D TYT++I +C K ++A + + +G P +V Y +
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCK-TGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Query: 138 IRAYCCYG 145
+ C G
Sbjct: 477 MSGLCTKG 484
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M E+ + PN + + +I +E + EAE++++EM ++ PD TY+SLI+ C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D+ D+A + MI + P+VV YN LI+ +C
Sbjct: 372 MH-DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M +G +P+ + V+ GLC+ A + ++M++ D YT++ID
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC+Y + D A + EM ++G P+VV YN LIR C YG
Sbjct: 265 LCNYKNVND-ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M K PN + N +I+G C+ R +E E+F EM ++G + TY +LI L D
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D A K+ ++M+ G P ++ Y+ L+ C YG
Sbjct: 446 -CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M + +E + +I LC +A +F EM KG P+ TY SLI LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+Y +D A ++L +MI+R +P+VV ++ LI A+
Sbjct: 302 NYGRWSD-ASRLLSDMIERKINPNVVTFSALIDAF 335
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M KG+ PN + N +I+ LC R +A + +M + P+ T+++LID
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
+ K +A+K+ EMI R P + Y+ LI +C +
Sbjct: 337 K-EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M+++G+ N+ + N +IQGL + A+++F++M G PD TY+ L+D LC
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
Y K +KA V + P + YN +I C G
Sbjct: 477 KY-GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+ P + +I A K L+ A M ++ ++P+ + + +I G C R EA+
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+FE M K P+ TY +LI C + ++ ++ REM RG + V YN LI+
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCK-AKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 141 YCCYGYC 147
G C
Sbjct: 440 LFQAGDC 446
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 27 LEPESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+EP+ + +MI K L +++ KGV+PN +I G CR+ +EA+
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGF 127
+F EMK G P+ TY +LI DK A+ +++EM GF
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE-LIKEMRSCGF 601
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 56 VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKA 115
+EP+ + N +I+G+C+ + ++ ++F + KG P+ YT++I C K ++A
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK-EEA 554
Query: 116 DKVLREMIDRGFSPSVVEYNKLIRA 140
D + REM + G P+ YN LIRA
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRA 579
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M GV P+ + + ++ GLC+ + ++A VFE +++ PD TY +I+ +C
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D + + +G P+V+ Y +I +C
Sbjct: 516 VEDGWD-LFCSLSLKGVKPNVIIYTTMISGFC 546
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M E+ + PN + + +I +E + EAE++++EM ++ PD TY+SLI+ C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D+ D+A + MI + P+VV YN LI+ +C
Sbjct: 373 MH-DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 28 EPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEE 81
+P+S+ +I + L+ M KG +P+ + V+ GLC+ A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 82 VFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ ++M++ P Y ++ID LC+Y + D A + EM ++G P+VV YN LIR
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVND-ALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 142 CCYG 145
C YG
Sbjct: 302 CNYG 305
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M + +EP N +I LC +A +F EM KG P+ TY SLI LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+Y +D A ++L +MI+R +P+VV ++ LI A+
Sbjct: 303 NYGRWSD-ASRLLSDMIERKINPNVVTFSALIDAF 336
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M KG+ PN + N +I+ LC R +A + +M + P+ T+++LID
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
+ K +A+K+ EMI R P + Y+ LI +C +
Sbjct: 338 K-EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M K PN + N +I+G C+ R E E+F EM ++G + TYT+LI +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQT 149
D A V ++M+ G P ++ Y+ L+ C G +T
Sbjct: 447 -CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 27 LEPESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+EP+ + +MI K L +++ KGV+PN + ++ G CR+ +EA+
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREM 122
+F EMK +G PD TY +LI DK A+ ++REM
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE-LIREM 597
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
+++ M + G EP+ +LN ++ G C R +A + +M G+ PD T+ +LI L
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ ++ +A ++ M+ +G P +V Y ++ C G
Sbjct: 197 FRH-NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 56 VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKA 115
+EP+ + N +I+G+C+ + ++ ++F + KG P+ TYT+++ C K ++A
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK-EEA 555
Query: 116 DKVLREMIDRGFSPSVVEYNKLIRAY 141
D + REM + G P YN LIRA+
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIRAH 581
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M GV P+ + + ++ GLC + + A VFE ++R PD TY +I+ +C
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D + + +G P+VV Y ++ +C
Sbjct: 517 VEDGWD-LFCSLSLKGVKPNVVTYTTMMSGFC 547
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M KG P+ N +I G CRE R +A +V ++M G +P+ +Y +LI LC
Sbjct: 282 LLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLC 341
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D D+ K L EMI +GFSP N L++ +C +G
Sbjct: 342 D-QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFG 379
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M E+ V P+ DS +IQG CR+ + A E+ ++M KGF PD +YT+L++ LC
Sbjct: 212 LFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLC 271
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ +A K+L M +G +P +V YN +I +C
Sbjct: 272 R-KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFC 306
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M KG P+ S ++ LCR+ + +EA ++ MK KG PD Y ++I C
Sbjct: 247 LLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFC 306
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D D A KVL +M+ G SP+ V Y LI C G
Sbjct: 307 REDRAMD-ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQG 344
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 26 SLEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
S+ P+ T +I K L A M + V+PN+ + N +I GLC R +A
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
++ F+ M KG P+ TY +LI C + D+ K+ + M GF+ + YN LI
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKF-RMVDEGMKLFQRMSCEGFNADIFTYNTLI- 358
Query: 140 AYCCYGYCQTQKL 152
+GYCQ KL
Sbjct: 359 ----HGYCQVGKL 367
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M + G EPN N +I GLC+ A E+ EM++KG D TY +L+ LC
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
Y + A ++LR+M+ R +P VV + LI +
Sbjct: 223 -YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M +KG+ + + N ++ GLC R +A + +M ++ PD T+T+LID+
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D+A ++ +EMI P+ V YN +I C +G
Sbjct: 258 K-QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A ++ M ++ + P+ + +I ++ EA+E+++EM + P+ TY S+I+
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
LC + D A K M +G P+VV YN LI +C
Sbjct: 291 LCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFC 327
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M + G EP+ + ++ G C R +A + M + G+ P+ Y +LID LC
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ + + A ++L EM +G VV YN L+ C G
Sbjct: 188 K-NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
+ M +G+EP+S + N +I G C+ + AE + + GF PD+ TY SLID LC
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC- 367
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
++ +T++A + E + +G P+V+ YN LI+
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M + GV+P+ + N ++ GLC+ + ++ E ++ M KG AP+ T+ L++ LC
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
Y K D+A +L EM ++ +P V + LI +C
Sbjct: 543 RY-RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 18 IRGFAAAGSLEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLC 71
I G A P+ + +I + L + KG++PN N +I+GL
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 72 REWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSV 131
+ EA ++ EM KG P+ +T+ L++ LC +D AD +++ MI +G+ P +
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD-ADGLVKVMISKGYFPDI 461
Query: 132 VEYNKLIRAY 141
+N LI Y
Sbjct: 462 FTFNILIHGY 471
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 26 SLEPESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
L PE ++++ K+ GL+ M KG P+ + N +I G + + + A
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA 480
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVL---REMIDRGFSPSVVEYNK 136
E+ + M G PD TY SL++ LC KT K + V+ + M+++G +P++ +N
Sbjct: 481 LEILDVMLDNGVDPDVYTYNSLLNGLC----KTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 137 LIRAYCCY 144
L+ + C Y
Sbjct: 537 LLESLCRY 544
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ + ++GV PN + N IQGLC+ A + + +G PD TY +LI LC
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQ 148
+ K +A+ L +M++ G P YN LI YC G Q
Sbjct: 298 K-NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 50 AMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYD 109
M EKG PN + N +++ LCR + EA + EEMK K PD T+ +LID C
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 110 DKTDKADKVLREMIDR-GFSPSVVEYNKLIRAY 141
D D A + R+M + S S YN +I A+
Sbjct: 581 D-LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M GV + N++++ LC++ KE E++ +++ ++G P+ TY I LC
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+ D A +++ +I++G P V+ YN LI YG C+ K
Sbjct: 263 QRGE-LDGAVRMVGCLIEQGPKPDVITYNNLI-----YGLCKNSKF 302
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M EK + P+ + + +I +E + EAEE+++EM R P TY S+ID C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D+ D A ++L M +G SP VV ++ LI YC
Sbjct: 127 K-QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC 161
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ +M KG P+ + + +I G C+ R E+F EM R+G + TYT+LI C
Sbjct: 137 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 196
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D A +L EMI G +P + ++ ++ C
Sbjct: 197 QVGD-LDAAQDLLNEMISCGVAPDYITFHCMLAGLC 231
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 66 VIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDR 125
++ LC++ A+ +F EM KG P+ TY +ID C + + AD++LR MI++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFC-HSGRWSDADQLLRHMIEK 74
Query: 126 GFSPSVVEYNKLIRAY 141
+P +V ++ LI A+
Sbjct: 75 QINPDIVTFSALINAF 90
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + P + + N +I G C++ R +A+ + + M KG +PD T+++LI+ C
Sbjct: 106 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK- 164
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D ++ EM RG + V Y LI +C G
Sbjct: 165 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 199
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
KK G + M G++P + N ++QG R + A + EMK KGF PD +TY +
Sbjct: 242 KKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPI 301
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ +C+ +A +VLREM + G P V YN LIR
Sbjct: 302 LSWMCN----EGRASEVLREMKEIGLVPDSVSYNILIRG 336
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ + EKG+ +S + N +I G C+ K+A + +EM G P + TYTSLI +LC
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+KT +AD++ +++ +G P +V N L+ +C G
Sbjct: 444 R-KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG 481
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 34 NTMM-----ISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR 88
NT+M I + L+ M + P+ + N +++GLC E + +EA E+ EMKR
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530
Query: 89 KGFAPDEKTYTSLIDLLCDYDDKTD--KADKVLREMIDRGFSPSVVEYNKLIRA 140
+G PD +Y +LI Y K D A V EM+ GF+P+++ YN L++
Sbjct: 531 RGIKPDHISYNTLIS---GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKG 581
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
KK L M G++P + +I LCR+ +T+EA+E+FE++ KG PD +L
Sbjct: 414 KKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTL 473
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+D C + D+A +L+EM +P V YN L+R C G
Sbjct: 474 MDGHCAIGN-MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M ++G+ P + N +I GL E + + AE + E++ KG D TY LI+ C + D
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
KA + EM+ G P+ Y LI C
Sbjct: 413 -AKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
+ + ++ M E G+ P+S S N +I+G + A +EM ++G P TY +LI
Sbjct: 310 RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
L ++K + A+ ++RE+ ++G V YN LI YC +G
Sbjct: 370 HGLF-MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 69.7 bits (169), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + G+E + + ++ G+C+E R +AE EM R G PD+ TYT ++D C D
Sbjct: 441 MDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K+L+EM G PSVV YN L+ C G
Sbjct: 501 -AQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 34 NTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAP 93
N +++A+ V G M +G+ P+ + +I G CR + A E+ +EM + G
Sbjct: 393 NGDLVAARNIVDG----MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 94 DEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQT 149
D +++L+ +C + + A++ LREM+ G P V Y ++ A+C G QT
Sbjct: 449 DRVGFSALVCGMCK-EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
GL M ++G+ PN +I G R +E +++M KG PD Y +L++
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQT 149
C D A ++ MI RG P + Y LI +C G +T
Sbjct: 391 CKNGDLV-AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 38 ISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKT 97
IS +KV +T++ ++P S N +I G C+ E + +M++ PD T
Sbjct: 256 ISDAQKV---FDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFT 312
Query: 98 YTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
Y++LI+ LC ++K D A + EM RG P+ V + LI +
Sbjct: 313 YSALINALCK-ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 26 SLEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
SL+P +I+ KV L M + P+ + + +I LC+E + A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
+F+EM ++G P++ +T+LI + + D + ++M+ +G P +V YN L+
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGH-SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 140 AYCCYG 145
+C G
Sbjct: 389 GFCKNG 394
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K L+S M E ++P+ + +I LC++ +A+ +F EM KG AP+ TY +
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
ID C + +D A ++LR+MI+R +P V+ +N LI A
Sbjct: 338 IDGFCSFGRWSD-AQRLLRDMIEREINPDVLTFNALISA 375
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A L++ M KG+ + + ++ G+C+ TK A + +M+ PD Y+++ID
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC D A + EM+++G +P+V YN +I +C +G
Sbjct: 306 LCK-DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 58 PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADK 117
P+ + N +I CR R E ++ E+ R+G + TY +LI C+ D+ + A
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN-LNAAQD 488
Query: 118 VLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+ +EMI G P + N L+ YG+C+ +KL
Sbjct: 489 LFQEMISHGVCPDTITCNILL-----YGFCENEKL 518
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M E+ + P+ + N +I +E + EAE++ +EM + PD TY S+I C
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
++ D + M D SP VV +N +I YC
Sbjct: 413 KHNRFDDA-----KHMFDLMASPDVVTFNTIIDVYC 443
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L ++ GVEP+ + N +I G C + +A +F +MK G PD TY +LI C
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR-GC 617
Query: 107 DYDDKTDKADKVLREMIDRGFS 128
+ DK+ +++ EM GFS
Sbjct: 618 LKAGEIDKSIELISEMRSNGFS 639
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M E+ + P+ + + +I L +E + EAEE++ +M R+G P TY S+ID C
Sbjct: 133 LLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFC 192
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D+ + A ++L M + SP VV ++ LI YC
Sbjct: 193 K-QDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M E ++ + N +I LC++ A+ +F EM KG PD TY+ +ID C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
TD A+++LR+MI+R +P VV ++ LI A
Sbjct: 123 RSGRWTD-AEQLLRDMIERQINPDVVTFSALINA 155
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ +M K P+ + + +I G C+ R E+F EM R+G + TYT+LI C
Sbjct: 203 MLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D A +L MI G +P+ + + ++ + C
Sbjct: 263 QVGD-LDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M +KG+ P+ + + +I CR R +AE++ +M + PD T+++LI+ L
Sbjct: 98 LFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALV 157
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ K +A+++ +M+ RG P+ + YN +I +C
Sbjct: 158 K-EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFC 192
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M +G+ P + + N +I G C++ R +A+ + + M K +PD T+++LI+ C
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK- 230
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D ++ EM RG + V Y LI +C G
Sbjct: 231 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 50 AMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYD 109
A+ ++ VE +I GLC+ T+ A + +M+ Y ++ID LC D
Sbjct: 31 ALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCK-D 89
Query: 110 DKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
A + EM D+G P V+ Y+ +I ++C
Sbjct: 90 GHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M + +E + N +I GLC+ +A +F EM KG PD TY+SLI LC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+Y +D A ++L +MI+R +P+VV ++ LI A+
Sbjct: 305 NYGRWSD-ASRLLSDMIERKINPNVVTFSALIDAF 338
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M E+ + PN + + +I +E + EAE++++EM ++ PD TY+SLI+ C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D+ D+A + MI + P+VV Y+ LI+ +C
Sbjct: 375 MH-DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M K PN + + +I+G C+ R +E E+F EM ++G + TYT+LI D
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D A V ++M+ G P+++ YN L+ C G
Sbjct: 449 -CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 28 EPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEE 81
+P+++ T +I + L+ M ++G +P+ + V+ GLC+ A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 82 VFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ ++M++ D Y ++ID LC Y D A + EM ++G P V Y+ LI
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKY-KHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 142 CCYG 145
C YG
Sbjct: 304 CNYG 307
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M GV PN + N ++ GLC+ + +A VFE ++R PD TY +I+ +C
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK-AG 517
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K + ++ + +G SP+V+ YN +I +C
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFC 549
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
+++ M + G EP+ +L+ ++ G C R +A + ++M G+ PD T+T+LI L
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ +K +A ++ +M+ RG P +V Y ++ C G
Sbjct: 199 FLH-NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M E G +P++ + +I GL + EA + ++M ++G PD TY ++++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
LC D D A +L++M VV YN +I C Y +
Sbjct: 233 LCKRGD-IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 56 VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKA 115
+EP+ + N +I+G+C+ + ++ E+F + KG +P+ Y ++I C K ++A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK-EEA 557
Query: 116 DKVLREMIDRGFSPSVVEYNKLIRA 140
D +L++M + G P+ YN LIRA
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 26 SLEPESWPNTMMISAKKKVAG------LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
++EP+ + +MI K L ++ KGV PN + N +I G CR+ +EA
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFS 128
+ + ++MK G P+ TY +LI D+ A+ +++EM GF+
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAE-LIKEMRSCGFA 605
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 26 SLEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
S++P+ + +I+ K + M K P+ D+ N +I+G C+ R ++
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
E+F EM +G D TYT+LI L +D D A KV ++M+ G P ++ Y+ L+
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLF-HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 140 AYCCYG 145
C G
Sbjct: 404 GLCNNG 409
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M EK + PN + N +I +E + EAE++ ++M ++ PD TY SLI+ C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D+ DKA ++ M+ + P + YN LI+ +C
Sbjct: 302 MH-DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M +E + N +I LC+ +A +F+EM+ KG P+ TY+SLI LC
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG-YCQTQKL 152
Y +D A ++L +MI++ +P++V +N LI A+ G + + +KL
Sbjct: 232 SYGRWSD-ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M ++G +PN + V+ GLC+ A + +M+ D + ++ID
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC Y D A + +EM +G P+VV Y+ LI C YG
Sbjct: 195 LCKY-RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M KG+ PN + + +I LC R +A ++ +M K P+ T+ +LID
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
+ K +A+K+ +MI R P + YN LI +C +
Sbjct: 267 K-EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
L+ M + G EP+ +L+ ++ G C R +A + ++M G+ PD T+T+LI L
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ +K +A ++ M+ RG P++V Y ++ C G
Sbjct: 126 FLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M ++ ++P+ + N +I G C R +A+++FE M K PD TY +LI C
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
+ + ++ REM RG V Y LI+ G C +
Sbjct: 337 K-SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M GV P+ + + ++ GLC + ++A EVF+ M++ D YT++I+ +C
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA-G 444
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K D + + +G P+VV YN +I C
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L +++ KGV+PN + N +I GLC + +EA + ++MK G PD TY +LI
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 107 DYDDKTDKADKVLREM 122
DK A+ ++REM
Sbjct: 512 RDGDKAASAE-LIREM 526
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L S +GV N+ + N +I GLC++ EA +F+ ++ G P E TY LI
Sbjct: 673 KALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILI 732
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D LC D A+K+L M+ +G P+++ YN ++ YC G
Sbjct: 733 DNLCKEGLFLD-AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
GL+ M ++GVEPN + +I+GLC+ + +EA +F + G DE Y +LID +
Sbjct: 298 GLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGI 357
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
C ++A +L +M RG PS++ YN +I C G
Sbjct: 358 CR-KGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L ++ G+ P+ + +I LC+E +AE++ + M KG P+ Y S++D C
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D V R+M+ R +P + +I+ YC
Sbjct: 772 KLGQTEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYC 806
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ +M KG+ PN N ++ G C+ +T++A V PD T +S+I C
Sbjct: 747 LLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D ++A V E D+ S + LI+ +C G
Sbjct: 807 KKGD-MEEALSVFTEFKDKNISADFFGFLFLIKGFCTKG 844
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K L+S M E ++P+ + +I LC++ +A+ +F EM KG AP+ TY +
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
ID C + +D A ++LR+MI+R +P V+ +N LI A
Sbjct: 338 IDGFCSFGRWSD-AQRLLRDMIEREINPDVLTFNALISA 375
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
+ A L++ M KG+ + + ++ G+C+ TK A + +M+ PD Y+++I
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG-YCQTQKL 152
D LC D A + EM+++G +P+V YN +I +C +G + Q+L
Sbjct: 304 DRLCK-DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 58 PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADK 117
P+ + N +I CR R E ++ E+ R+G + TY +LI C+ D+ + A
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN-LNAAQD 488
Query: 118 VLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+ +EMI G P + N L+ YG+C+ +KL
Sbjct: 489 LFQEMISHGVCPDTITCNILL-----YGFCENEKL 518
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M E+ + P+ + N +I +E + EAE++ +EM + PD TY S+I C
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
++ D + M D SP VV +N +I YC
Sbjct: 413 KHNRFDDA-----KHMFDLMASPDVVTFNTIIDVYC 443
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L ++ GVEP+ + N +I G C + +A +F +MK G PD TY +LI C
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR-GC 617
Query: 107 DYDDKTDKADKVLREMIDRGFS 128
+ DK+ +++ EM GFS
Sbjct: 618 LKAGEIDKSIELISEMRSNGFS 639
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M + +EP N +I GLC+ +A +F+EM+ KG P+ TY+SLI LC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+Y +D A ++L +MI+R +P V ++ LI A+
Sbjct: 303 NYGRWSD-ASRLLSDMIERKINPDVFTFSALIDAF 336
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M E+ + P+ + + +I +E + EAE++++EM ++ P TY+SLI+ C
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
+ D+ D+A ++ M+ + P VV YN LI+ +C Y
Sbjct: 373 MH-DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+ P+ + + +I A K L+ A M ++ ++P+ + + +I G C R EA+
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
++FE M K PD TY +LI C Y + ++ +V REM RG + V YN LI+
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYK-RVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 141 YCCYGYC 147
G C
Sbjct: 441 LFQAGDC 447
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M K P+ + N +I+G C+ R +E EVF EM ++G + TY LI L D
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D A ++ +EM+ G P+++ YN L+ C G
Sbjct: 447 -CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
L+ M KG +P+ + V+ GLC+ T A + +M++ P Y ++ID L
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
C Y D A + +EM +G P+VV Y+ LI C YG
Sbjct: 267 CKY-KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M G +PN+ + N +I GL + EA + + M KG PD TY +++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
LC D TD A +L +M P V+ YN +I C Y +
Sbjct: 231 LCKRGD-TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M+++G+ N+ + N +IQGL + A+E+F+EM G P+ TY +L+D LC +
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK-NG 480
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K +KA V + P++ YN +I C G
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M GV PN + N ++ GLC+ + ++A VFE ++R P TY +I+ +C
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D + + +G P VV YN +I +C
Sbjct: 517 VEDGWD-LFCNLSLKGVKPDVVAYNTMISGFC 547
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
++ M + G EPN +L+ ++ G C R EA + ++M G+ P+ T+ +LI L
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ +K +A ++ M+ +G P +V Y ++ C G
Sbjct: 197 FLH-NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 56 VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKA 115
+EP + N +I+G+C+ + ++ ++F + KG PD Y ++I C K ++A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK-EEA 555
Query: 116 DKVLREMIDRGFSPSVVEYNKLIRA 140
D + +EM + G P+ YN LIRA
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 27 LEPESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+EP + +MI K L ++ KGV+P+ + N +I G CR+ +EA+
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFS 128
+F+EMK G P+ Y +LI D+ A+ +++EM GF+
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE-LIKEMRSCGFA 603
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L M EKG++ + + VI GLC+E + E VFE M RKG P+ YT LID
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D A ++L MID GF P VV Y+ ++ C G
Sbjct: 372 YAKSGSVED-AIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 411
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 15/124 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I G+A +GS+E L+ M ++G +P+ + + V+ GLC+ R +
Sbjct: 369 IDGYAKSGSVE--------------DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
EA + F + G A + Y+SLID L + D+A+++ EM ++G + YN L
Sbjct: 415 EALDYFHTCRFDGLAINSMFYSSLIDGL-GKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 138 IRAY 141
I A+
Sbjct: 474 IDAF 477
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E G+EP + N ++ GL AE VFE M+ PD TY ++I C
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCK-AG 271
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+T KA + LR+M RG + Y +I+A CY
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQA--CYA 304
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M ++G+ PN+ + N +I G C+E R +EA ++ + M KG PD T+ LI+ C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+ + D ++ REM RG + V YN L++ G+CQ+ KL
Sbjct: 415 KAN-RIDDGLELFREMSLRGVIANTVTYNTLVQ-----GFCQSGKL 454
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A L+ M ++ + PN + + +I +E + +EA+++ +EM ++G AP+ TY SLID
Sbjct: 318 AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
C +++ ++A +++ MI +G P ++ +N LI YC
Sbjct: 378 FCK-ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 34 NTMMISAKKKVAG-LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFA 92
N M S + +A L+ M E+ ++ ++ + +I GLC++ A +F EM+ KGF
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 93 PDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
D TY +LI C+ + D K+LR+MI R SP+VV ++ LI ++
Sbjct: 296 ADIITYNTLIGGFCNA-GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M KG +P+ + N +I G C+ R + E+F EM +G + TY +L+ C
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K + A K+ +EM+ R P +V Y L+ C G
Sbjct: 450 Q-SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M E G +PN + V+ +C+ +T A E+ +M+ + D Y+ +ID LC
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D D A + EM +GF ++ YN LI +C G
Sbjct: 275 K-DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
M + + G EP++ N ++ GLC E R EA E+ + M G P T +L++ LC
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC- 204
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ K A ++ M++ GF P+ V Y ++ C G
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M E G +P +LN ++ GLC + +A + + M GF P+E TY +++++C
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+T A ++LR+M +R V+Y+ +I C
Sbjct: 240 K-SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 66 VIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDR 125
+I G+C + +A ++F + KG D + Y +I LC D KAD + R+M +
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC-RKDSLSKADILFRKMTEE 572
Query: 126 GFSPSVVEYNKLIRAY 141
G +P + YN LIRA+
Sbjct: 573 GHAPDELTYNILIRAH 588
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L ++ KGV+ ++ + N +I LCR+ +A+ +F +M +G APDE TY LI
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHL 589
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
DD T A+ ++ EM GF P+ V K++
Sbjct: 590 GDDDATTAAE-LIEEMKSSGF-PADVSTVKMV 619
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M+ +GV N+ + N ++QG C+ + + A+++F+EM + PD +Y L+D LC
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
D + + +KA ++ ++ S +E + I +G C K+
Sbjct: 485 D-NGELEKALEIFGKI-----EKSKMELDIGIYMIIIHGMCNASKV 524
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A LM M + + PN + VI +E + EA +++EEM R+ PD TY SLI+
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
LC + + D+A ++L M+ +G P VV YN LI +C
Sbjct: 289 LCMH-GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L MT + V+P+ + N +I GLC R EA+++ + M KG PD TY +LI+ C
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ D+ K+ REM RG + YN +I+ Y
Sbjct: 326 K-SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M E G P+ N +I G C+ +A E+F+ M+R G D TY SL+ LC
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+D A +++R+M+ R P+V+ + +I +
Sbjct: 221 CSGRWSDAA-RLMRDMVMRDIVPNVITFTAVIDVF 254
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M GV ++ + N ++ GLC R +A + +M + P+ T+T++ID+
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ K +A K+ EM R P V YN LI C +G
Sbjct: 256 K-EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 58 PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADK 117
PN + + ++ GLC WR ++A +FE M++ D TY +I +C + D D
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD- 437
Query: 118 VLREMIDRGFSPSVVEYNKLIRAYC 142
+ R + +G P VV Y +I +C
Sbjct: 438 LFRSLSCKGLKPDVVSYTTMISGFC 462
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 44 VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLID 103
V L M G+ + S N VI LCR R A V +M + G+ PD T +SLI+
Sbjct: 88 VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147
Query: 104 LLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
C + D D V +M + GF P VV YN +I C G
Sbjct: 148 GFCQGNRVFDAIDLV-SKMEEMGFRPDVVIYNTIIDGSCKIG 188
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M + G EP+ +++ +I G C+ R +A ++ +M+ GF PD Y ++ID C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 107 D---YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+D + D++ R+ G V YN L+ CC G
Sbjct: 186 KIGLVNDAVELFDRMERD----GVRADAVTYNSLVAGLCCSG 223
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K L M + +E + + N VI G+C+ ++A ++F + KG PD +YT++
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSP 129
I C + DK+D + R+M + G P
Sbjct: 458 ISGFCR-KRQWDKSDLLYRKMQEDGLLP 484
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 15/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
IRGF G L+ + L + E+G P + + N +I+G C+ + K
Sbjct: 254 IRGFCDCGELD--------------RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
EA E+FE M +G P+ TYT LID LC KT +A ++L MI++ P+ V YN +
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGV-GKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 138 IRAYC 142
I C
Sbjct: 359 INKLC 363
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 24/148 (16%)
Query: 18 IRGFAAAGSLE---------------PESWPNTMMISA------KKKVAGLMSAMTEKGV 56
IRGF G L+ P + T +I K+ L++ M EK
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 57 EPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKAD 116
EPN+ + N +I LC++ +A E+ E MK++ PD TY L+ LC D D+A
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD-LDEAS 407
Query: 117 KVLREMI-DRGFS-PSVVEYNKLIRAYC 142
K+L M+ D ++ P V+ YN LI C
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLC 435
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 15/128 (11%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
IRGF LE + ++ + K +G ++ G+ +I C+ +
Sbjct: 184 IRGFCEGKELEK-----ALELANEMKGSGCSWSLVTWGI---------LIDAFCKAGKMD 229
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
EA +EMK G D YTSLI CD + D+ + E+++RG SP + YN L
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE-LDRGKALFDEVLERGDSPCAITYNTL 288
Query: 138 IRAYCCYG 145
IR +C G
Sbjct: 289 IRGFCKLG 296
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
G+++ M ++G N + N +++GLCR +A + EM+R PD +Y ++I
Sbjct: 128 GVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGF 187
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
C+ + +KA ++ EM G S S+V + LI A+C G
Sbjct: 188 CE-GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L+ M + P+ S N VI+G C ++A E+ EMK G + T+ LI
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D C K D+A L+EM G +V Y LIR +C
Sbjct: 220 DAFCKA-GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 30 ESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRK 89
+ + T M++ K GL+ M ++P+ N ++ LC+E +A +FEEM+R
Sbjct: 502 DGFCKTGMLNVAK---GLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD 558
Query: 90 GFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
PD ++ +ID D A+ +L M G SP + Y+KLI + GY
Sbjct: 559 NNFPDVVSFNIMIDGSLKAGD-IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M +G+ P++ + N +I G C+E EA ++F+ M KG PD TY+ LI+ C
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+ D ++ RE+ +G P+ + YN L+ G+CQ+ KL
Sbjct: 397 KA-KRVDDGMRLFREISSKGLIPNTITYNTLV-----LGFCQSGKL 436
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M E+ ++ + + VI LC++ +A +F EM+ KG D TY+SLI LC
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ D K D K+LREMI R P VV ++ LI +
Sbjct: 292 N-DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A ++ M + + P+ + + +I +E + EA+E++ EM +G APD TY SLID
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
C ++ +A+++ M+ +G P +V Y+ LI +YC
Sbjct: 360 FCK-ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M KG EP+ + + +I C+ R + +F E+ KG P+ TY +L+ C
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K + A ++ +EM+ RG PSVV Y L+ C
Sbjct: 432 Q-SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L ++ KG+ PN+ + N ++ G C+ + A+E+F+EM +G P TY L+D LC
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D + + +KA ++ +M + + YN +I C
Sbjct: 467 D-NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M E P+ +++ +I GLC + R EA + + M GF PDE TY +++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
LC + D + R+M +R SVV+Y+ +I + C
Sbjct: 220 LCKSGNSALALD-LFRKMEERNIKASVVQYSIVIDSLC 256
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M +GV P+ + ++ GLC +A E+FE+M++ Y +I +C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ K D A + + D+G P VV YN +I C
Sbjct: 502 NA-SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 27 LEPESWPNTMMISA---KKKVAGLMSAMTEK---GVEPNSDSLNEVIQGLCREWRTKEAE 80
+E + + T+MI+ KKK+ S + G EP++ + + ++ G C E R EA
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ + M PD T ++LI+ LC + +A ++ M++ GF P V Y ++
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLC-LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 141 YCCYG 145
C G
Sbjct: 220 LCKSG 224
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 64 NEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMI 123
N +I G+C + +A +F + KG PD TY +I LC +AD + R+M
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK-KGSLSEADMLFRKMK 552
Query: 124 DRGFSPSVVEYNKLIRAY 141
+ G +P YN LIRA+
Sbjct: 553 EDGCTPDDFTYNILIRAH 570
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
L ++++KGV+P+ + N +I GLC++ EA+ +F +MK G PD+ TY LI
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M ++G +P+S + +I GLCR R EA+++F EM K AP TYTSLI+ LC +
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D+A + L EM +G P+V Y+ L+ C
Sbjct: 243 -VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLC 273
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAE-EVFEEMKRKGFAPDEKTYTSLIDLLCDYD 109
M E G+ P SLN +I+ LCR T +A ++F EM ++G PD TY +LI LC +
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRF- 205
Query: 110 DKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D+A K+ EM+++ +P+VV Y LI C
Sbjct: 206 GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M KG+EPN + + ++ GLC++ R+ +A E+FE M +G P+ TYT+LI LC +
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK-EQ 311
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K +A ++L M +G P Y K+I +C
Sbjct: 312 KIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 28 EPESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEE 81
+P+S+ +IS + L + M EK P + +I GLC EA
Sbjct: 189 DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR 248
Query: 82 VFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
EEMK KG P+ TY+SL+D LC D ++ +A ++ M+ RG P++V Y LI
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCK-DGRSLQAMELFEMMMARGCRPNMVTYTTLIT-- 305
Query: 142 CCYGYCQTQKL 152
G C+ QK+
Sbjct: 306 ---GLCKEQKI 313
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M +G PN + +I GLC+E + +EA E+ + M +G PD Y +I C
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEY-------NKLIRAYC 142
K +A L EMI G +P+ + + N+++R C
Sbjct: 344 AI-SKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC 385
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
Query: 27 LEPESWPNTMMISAKKKVAG------LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L P ++ + ++ A K G L+ + KG EPN S N ++ G C+E RT +A
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+F E+ KGF + +Y L+ LC D + ++A+ +L EM +PSVV YN LI +
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLC-CDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 141 YCCYG 145
+G
Sbjct: 326 LAFHG 330
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 37 MISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEK 96
M+ + + + + +KG+ PN+ + + +++ +E T EA ++ +E+ KG P+
Sbjct: 188 MLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV 247
Query: 97 TYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+Y L+ C + +TD A + RE+ +GF +VV YN L+R CC G
Sbjct: 248 SYNVLLTGFCK-EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 295
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M + G N+ + N +++GLC ++ + E + +KG AP+ TY+ L++
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLE--A 220
Query: 107 DYDDK-TDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
Y ++ TD+A K+L E+I +G P++V YN L+ +C
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFC 257
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
+ ++ G +PN +++ LC+ R K+A V E M G PD YT L++ LC
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ A +++ +M D G+ + V YN L+R C G
Sbjct: 154 RGN-VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLG 190
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 47 LMSAMTE-KGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
++S M E + +P D+ N +I GLC+ RT A EVFE M K P+E TY L++ +
Sbjct: 480 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539
Query: 106 CDYDDKTDKADKVLREM 122
++D+ + A +VL E+
Sbjct: 540 A-HEDELELAKEVLDEL 555
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDY-- 108
M + ++PN + N VI LC+ + +A +V E+MK G +P+ +Y +LID C
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 109 DDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ K KAD VL+EM++ SP++ +N LI +
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M GV+PN + N +I G C+ KEA ++F +K +G P + Y LID C
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL-G 415
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
K D + EM G P V YN LI C G + K
Sbjct: 416 KIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 27 LEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCR---EWRTK 77
++P + ++I+A K +M M G PN S N +I G C+ +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
+A+ V +EM +P+ T+ LID DD + KV +EM+D+ P+V+ YN L
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWK-DDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 138 IRAYCCYG 145
I C G
Sbjct: 338 INGLCNGG 345
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K ++ M E V PN + N +I G ++ + +VF+EM + P+ +Y SLI
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ LC+ K +A + +M+ G P+++ YN LI +C
Sbjct: 339 NGLCN-GGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M ++ V+PN S N +I GLC + EA + ++M G P+ TY +LI+ C +D
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK-ND 380
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+A + + +G P+ YN LI AYC G
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 69 GLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFS 128
L +E R+ + E V++EM R+ P+ T+ +I+ LC K +KA V+ +M G S
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCK-TGKMNKARDVMEDMKVYGCS 255
Query: 129 PSVVEYNKLIRAYCCYG 145
P+VV YN LI YC G
Sbjct: 256 PNVVSYNTLIDGYCKLG 272
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 29 PESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P + M+I A K+ L M +G+ P+ + N +I GLCR + A+++
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
F+++ KG PD T+ L++ C ++ KA +L+EM G P + YN +++ YC
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCR-KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
L++ M ++ N N +I LC+ + A ++F EM+ KG P+ TY SLI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
C+Y +D A ++L M+++ +P+VV +N LI A+
Sbjct: 304 CNYGRWSD-ASRLLSNMLEKKINPNVVTFNALIDAF 338
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M EK + PN + N +I +E + EAE++ EEM ++ PD TY LI+ C
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ ++ D+A ++ + M+ + P++ YN LI +C
Sbjct: 375 MH-NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M KG+ PN + N +I LC R +A + M K P+ T+ +LID
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ K +A+K+ EMI R P + YN LI +C +
Sbjct: 340 K-EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M ++ ++P++ + N +I G C R EA+++F+ M K P+ +TY +LI+ C
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
D + + REM RG + V Y +I+ + G C + ++
Sbjct: 410 KCKRVEDGVE-LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 28 EPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEE 81
+P+++ T +I + L+ M ++G +P+ + V+ GLC+ A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 82 VFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ +M+ + + ++ID LC Y + A + EM +G P+VV YN LI
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKY-RHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 142 CCYG 145
C YG
Sbjct: 304 CNYG 307
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 26 SLEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
S++P++ ++I+ + + M K PN + N +I G C+ R ++
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
E+F EM ++G + TYT++I D D A V ++M+ ++ Y+ L+
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGD-CDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 140 AYCCYGYCQT 149
C YG T
Sbjct: 477 GLCSYGKLDT 486
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
+++ M + G EP+ +L+ ++ G C R +A + ++M G+ PD T+T+LI L
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ +K +A ++ +M+ RG P +V Y ++ C G
Sbjct: 199 FLH-NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M E G +P++ + +I GL + EA + ++M ++G PD TY ++++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQT 149
LC D D A +L +M +VV +N +I + C Y + +
Sbjct: 233 LCKRGD-IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
KKV G++ + G +P+ + + +I LCR K+A + F+EM G P+E TY L
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNIL 536
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
I C D TD++ K+ +M + G SP + YN I+++C
Sbjct: 537 IRSCCSTGD-TDRSVKLFAKMKENGLSPDLYAYNATIQSFC 576
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A ++ M ++G+ PN + N + G K+ V E++ GF PD T++ +I+
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC + D D +EM++ G P+ + YN LIR+ C G
Sbjct: 505 LCRAKEIKDAFD-CFKEMLEWGIEPNEITYNILIRSCCSTG 544
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ +GV+P + ++Q L R E + ++M G +Y ++ID LC
Sbjct: 377 IFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC 436
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ + A L EM DRG SP++V +N + Y G
Sbjct: 437 K-ARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRG 474
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M E G+ P+ + N IQ C+ + K+AEE+ + M R G PD TY++LI L
Sbjct: 552 LFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALS 611
Query: 107 D 107
+
Sbjct: 612 E 612
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M E G +P+ + N ++ G+CR T A ++ +M+ + D TY+++ID LC
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D D A + +EM +G SVV YN L+R C G
Sbjct: 240 -RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M KG++ + + N +++GLC+ + + + ++M + P+ T+ L+D+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ K +A+++ +EMI RG SP+++ YN L+ YC
Sbjct: 310 K-EGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A L+ M + + PN + N ++ +E + +EA E+++EM +G +P+ TY +L+D
Sbjct: 283 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
C ++ +A+ +L M+ SP +V + LI+ YC
Sbjct: 343 YC-MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M +G+ PN + N ++ G C + R EA + + M R +PD T+TSLI C
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC-MVK 382
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+ D KV R + RG + V Y+ L++ G+CQ+ K+
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQ-----GFCQSGKI 419
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
++++G+ N+ + + ++QG C+ + K AEE+F+EM G PD TY L+D LCD +
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD-NG 452
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K +KA ++ ++ +V Y +I C
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G EP++ + N +I+GL E + EA + + M G PD TY S+++ +C D T
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD-TSL 211
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYC 142
A +LR+M +R V Y+ +I + C
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLC 239
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 54 KGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTD 113
G+ N +LN +I CR +T A V ++ + G+ PD T+ +LI L + K
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLF-LEGKVS 175
Query: 114 KADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+A ++ M++ G P VV YN ++ C G
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 66 VIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDR 125
+I+G+C+ + ++A +F + KG P+ TYT +I LC ++ A+ +LR+M +
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE-ANILLRKMEED 537
Query: 126 GFSPSVVEYNKLIRAY 141
G +P+ YN LIRA+
Sbjct: 538 GNAPNDCTYNTLIRAH 553
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M P+ + +I+G C R + +VF + ++G + TY+ L+ C
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K A+++ +EM+ G P V+ Y L+ C
Sbjct: 415 Q-SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 29 PESWPNTMMISAKKK---VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEE 85
P+ +MIS K + +S + V P+ + N +++ LC + K+A EV +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 86 MKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
M ++ PD TYT LI+ C D A K+L EM DRG +P VV YN L+ C
Sbjct: 230 MLQRDCYPDVITYTILIEATC-RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 29 PESWPNTMMISAKKKVAG------LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P+ T++I A + +G L+ M ++G P+ + N ++ G+C+E R EA +
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+M G P+ T+ ++ +C D A+K+L +M+ +GFSPSVV +N LI C
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMD-AEKLLADMLRKGFSPSVVTFNILINFLC 355
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M + G +PNS S N ++ G C+E + A E E M +G PD TY +++ LC
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
D K + A ++L ++ +G SP ++ YN +I
Sbjct: 426 K-DGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M KG P+ + N +I LCR+ A ++ E+M + G P+ +Y L+ C
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ K D+A + L M+ RG P +V YN ++ A C
Sbjct: 391 K-EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M G +PN + N +++ +C R +AE++ +M RKGF+P T+ LI+ LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+A +L +M G P+ + YN L+ +C
Sbjct: 356 -RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+++ ++ KG P + N VI GL + +T +A ++ +EM+ K PD TY+SL+ L
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL- 494
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ K D+A K E G P+ V +N ++ C
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K+ ++ M ++ P+ + +I+ CR+ A ++ +EM+ +G PD TY L
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
++ +C + + D+A K L +M G P+V+ +N ++R+ C G
Sbjct: 281 VNGICK-EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L+ M K ++P++ + + ++ GL RE + EA + F E +R G P+ T+ S++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
LC +TD+A L MI+RG P+ Y LI
Sbjct: 527 LGLCK-SRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M +G P+ + N ++ LC++ + ++A E+ ++ KG +P TY ++ID L
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA-G 463
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLI 138
KT KA K+L EM + P + Y+ L+
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M G P+ +I+G CR +T++A ++ E ++ G PD TY +I C
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K + + L + SP VV YN ++R+ C
Sbjct: 184 ----KAGEINNALSVLDRMSVSPDVVTYNTILRSLC 215
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 37 MISAKK--KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPD 94
+ AKK + L+ M + PN + +I LC + EA +F++M G PD
Sbjct: 235 LFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPD 294
Query: 95 EKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ YT LI C D D+A +L M++ G P+V+ YN LI+ +C
Sbjct: 295 DCMYTVLIQSFCS-GDTLDEASGLLEHMLENGLMPNVITYNALIKGFC 341
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 37 MISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEK 96
++ AK+ V L+ A G +P+ + I G CR A +VF+EM + G +E
Sbjct: 171 VVEAKQYVTWLIQA----GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEV 226
Query: 97 TYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+YT LI L + K D+A +L +M D P+V Y LI A C G
Sbjct: 227 SYTQLIYGLFE-AKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSG 274
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 20 GFAAAGSLEPESWPNTMMISAK----KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWR 75
F L P+ + N + A+ +++ L + M E V P+ + N ++ G C+
Sbjct: 111 SFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGY 170
Query: 76 TKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYN 135
EA++ + + G PD TYTS I C + D A KV +EM G + V Y
Sbjct: 171 VVEAKQYVTWLIQAGCDPDYFTYTSFITGHCR-RKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 136 KLIRAYCCYGYCQTQKL 152
+LI YG + +K+
Sbjct: 230 QLI-----YGLFEAKKI 241
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 39 SAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTY 98
S K G+++ M E+ V P+ + N +I G CR A + M +G PD+ TY
Sbjct: 441 SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 99 TSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
TS+ID LC + ++A + + +G +P+VV Y LI YC G
Sbjct: 501 TSMIDSLCK-SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 58 PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADK 117
P + +I+ LC R EA + +EM+ G P+ TYT LID LC K +KA +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS-QCKFEKARE 379
Query: 118 VLREMIDRGFSPSVVEYNKLIRAYC 142
+L +M+++G P+V+ YN LI YC
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYC 404
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 41 KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTS 100
K + L+ M E G++PN + +I LC + + ++A E+ +M KG P+ TY +
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 101 LIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
LI+ C D D V+ M R SP+ YN+LI+ YC
Sbjct: 399 LINGYCKRGMIEDAVD-VVELMESRKLSPNTRTYNELIKGYC 439
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M K PNS + N +I GLC + + KEA + E+M + G P T T LI L
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D A ++M+ G P Y I+ YC
Sbjct: 614 K-DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L+P +T++I K A M G +P++ + IQ CRE R +AE
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDD--KTDKADKVLREMIDRGFSPSVVEYNKLI 138
++ +M+ G +PD TY+SLI Y D +T+ A VL+ M D G PS + LI
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIK---GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 139 R 139
+
Sbjct: 715 K 715
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 27 LEPESWPNTMMISA---KKKV---AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L P+ W T MI + K+V L ++ +KGV PN +I G C+ + EA
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
+ E+M K P+ T+ +LI LC D K +A + +M+ G P+V LI
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCA-DGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 44 VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR-KGFAPDEKTYTSLI 102
V L+ M E V PN+ S ++I G+C + AE+VF+ M+R +G +P E + +L+
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSV 131
C K ++A KV+ +MI G P +
Sbjct: 804 SCCCKL-KKHNEAAKVVDDMICVGHLPQL 831
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E V PN + N+++ G C+ +EA + ++ G PD TYTSLI C D
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D A KV EM +G + V Y LI C
Sbjct: 269 -LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + + PN+ + NE+I+G C+ +A V +M + PD TY SLID C
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR-SG 476
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D A ++L M DRG P Y +I + C
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
+S + E G++P+ + +I G C+ A +VF EM KG +E YT LI LC
Sbjct: 241 VSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC- 299
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D+A + +M D P+V Y LI++ C
Sbjct: 300 VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M +GVEP + N ++ G R + A FE+MK +G +PD+ T+ ++I+ C +
Sbjct: 246 MVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRF-K 304
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCC 143
K D+A+K+ EM PSVV Y +I+ Y
Sbjct: 305 KMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLA 337
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
LM+AM KG P + N VI GLC+ + + A+EVF EM R G +PD TY SL+ C
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
D + +KV +M R P +V ++ ++ +
Sbjct: 352 KKGDVVE-TEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 43 KVAGLMSAMTEK--GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTS 100
K GL+ M E+ G+ P+ + N ++ G CR+ + KEAE V +M +G PD TYT
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 101 LIDLLCDYDDKTDKADKVLREMIDRGFSP 129
+I+ D+ T+ A ++ EM+ RGFSP
Sbjct: 698 MINGFVSQDNLTE-AFRIHDEMLQRGFSP 725
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+KV +S + EKGV P+ + N +I + +EA E+ M KGF+P TY ++
Sbjct: 252 EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
I+ LC + K ++A +V EM+ G SP Y L+ C G
Sbjct: 312 INGLCKH-GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 41 KKKVAG----LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEK 96
K+K+ G L + MTE+ + P+S +L +I G C+ + A E+F++MK K D
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516
Query: 97 TYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
TY +L+D D D A ++ +M+ + P+ + Y+ L+ A C G+
Sbjct: 517 TYNTLLDGFGKVGD-IDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
G+ ++ GV N +LN ++ LC++ + ++ +++ KG PD TY +LI
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS-- 278
Query: 106 CDYDDK--TDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
Y K ++A +++ M +GFSP V YN +I C +G
Sbjct: 279 -AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M K ++P N +I+G CR + E E+M +GF PD +Y +LI ++
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR-EE 634
Query: 111 KTDKADKVLREMIDR--GFSPSVVEYNKLIRAYC 142
KA ++++M + G P V YN ++ +C
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC 668
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMK--RKGFAPDEKTYTSLIDL 104
+ M +G P+ S N +I G RE +A + ++M+ + G PD TY S++
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
C ++ +A+ VLR+MI+RG +P Y +I +
Sbjct: 667 FCR-QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
+ + KG + D+ N +I L R + A V++E+ R G + T +++ LC
Sbjct: 188 FTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCK 247
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D K +K L ++ ++G P +V YN LI AY G
Sbjct: 248 -DGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M ++G + + N ++ GLC+ EA+++F EM + PD T T LID C
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
+ A ++ ++M ++ VV YN L+ + G T K
Sbjct: 492 KLGN-LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
+++ E G+ P++ +IQG CR+ A + EM ++G A D TY +++ LC
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQT 149
+ADK+ EM +R P LI +C G Q
Sbjct: 458 -RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M K + P S + ++ LC + EA V++EM K P S+I C +
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+D + L +MI GF P + YN LI YG+ + + +
Sbjct: 601 ASD-GESFLEKMISEGFVPDCISYNTLI-----YGFVREENM 636
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ AM+ +G EPN + +I GLC+ + EA+EV EM GF TY+SLID
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D A KVL +M++ +P+VV Y ++I C G
Sbjct: 721 KV-KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K ++ M +G P++ + ++V+ LC + + A +FEEMKR G D TYT +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+D C ++A K EM + G +P+VV Y LI AY
Sbjct: 525 VDSFCK-AGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++S M E PN E+I GLC+ +T EA ++ + M+ KG P+ TYT++ID
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF- 789
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCC 143
K + ++L M +G +P+ V Y LI +CC
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLID-HCC 825
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 58 PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADK 117
PN + ++ G C+ R +EA ++ + M +G P++ Y +LID LC K D+A +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV-GKLDEAQE 695
Query: 118 VLREMIDRGFSPSVVEYNKLIRAY 141
V EM + GF ++ Y+ LI Y
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRY 719
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M +E N + VI LC+ +A +F EM+ KG P+ TY+SLI LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+Y +D A ++L +MI+R +P++V ++ LI A+
Sbjct: 300 NYGRWSD-ASRLLSDMIERKINPNLVTFSALIDAF 333
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M E+ + PN + + +I ++ + +AE+++EEM ++ P+ TY+SLI+ C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D+ +A ++L MI + P+VV YN LI +C
Sbjct: 370 ML-DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M K PN + N +I G C+ R + E+F EM ++G + TYT+LI
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D A V ++M+ G P+++ YN L+ C
Sbjct: 440 QARD-CDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M ++G +P+ + V+ GLC+ T A + +M+ + Y+++ID
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC Y + D A + EM ++G P+V+ Y+ LI C YG
Sbjct: 263 LCKYRHE-DDALNLFTEMENKGVRPNVITYSSLISCLCNYG 302
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+ P + +I A K L+ A M ++ ++PN + + +I G C R EA+
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
++ E M RK P+ TY +LI+ C + DK ++ REM RG + V Y LI
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCK-AKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 141 Y 141
+
Sbjct: 438 F 438
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + G EP+ +LN ++ G C R +A + ++M G+ PD T+T+LI L + +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH-N 197
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K +A ++ M+ RG P +V Y ++ C
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M E G +P++ + +I GL + EA + + M ++G PD TY ++++
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
LC D TD A +L +M +VV Y+ +I + C Y
Sbjct: 228 LCKRGD-TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M + +E + N +I GLC+ +A ++F +M+ KG PD TY LI LC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+Y +D A ++L +M+++ +P +V +N LI A+
Sbjct: 297 NYGRWSD-ASRLLSDMLEKNINPDLVFFNALIDAF 330
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 58 PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADK 117
P+ + N +I+G C+ R +E EVF EM ++G + TYT+LI D D A
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD-CDNAQM 412
Query: 118 VLREMIDRGFSPSVVEYNKLIRAYCCYGYCQT 149
V ++M+ G P ++ YN L+ C G +T
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEM-KRKGFAPDEKTYTSLIDLL 105
L+S M EK + P+ N +I +E + EAE++++EM K K PD Y +LI
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
C Y + ++ +V REM RG + V Y LI +
Sbjct: 367 CKY-KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M KG +P+ + VI GLC+ A + +M++ D Y ++ID
Sbjct: 200 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDG 259
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC Y D D + +M +G P V YN LI C YG
Sbjct: 260 LCKYKHMDDAFD-LFNKMETKGIKPDVFTYNPLISCLCNYG 299
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
++ M + G P+ +LN ++ G C R EA + ++M G+ PD T+T+L+ L
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ +K +A ++ M+ +G P +V Y +I C G
Sbjct: 191 FQH-NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M GV P+ + N ++ GLC + A VFE M+++ D TYT++I+ LC
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D + + +G P+VV Y ++ +C
Sbjct: 477 VEDGWD-LFCSLSLKGVKPNVVTYTTMMSGFC 507
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
L+ M E G +P++ + ++ GL + + EA + E M KG PD TY ++I+
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
LC + D A +L +M VV YN +I C Y +
Sbjct: 225 LCKRGEP-DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L +++ KGV+PN + ++ G CR+ +EA+ +F EMK G P+ TY +LI
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542
Query: 107 DYDDKTDKADKVLREMIDRGFS 128
D+ A+ +++EM GF+
Sbjct: 543 RDGDEAASAE-LIKEMRSCGFA 563
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCR-EWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
LM+ M ++G EPN + +IQ LCR E R EA VF EM+R G D TYT+LI
Sbjct: 293 LMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGF 352
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
C + DK VL +M +G PS V Y +++ A+
Sbjct: 353 CKW-GMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH 387
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M E G+EP+ ++ G + +A ++ +M+++GF P+ YT LI LC
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ + D+A +V EM G +V Y LI +C +G
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
Query: 27 LEPESWPNTMMISAK----KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
+EPE + M A KK ++ M + G+EP+ ++ LC+ KEA +V
Sbjct: 165 IEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKV 224
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
FE+M+ K F P+ + +TSL+ C + K +A +VL +M + G P +V + L+ Y
Sbjct: 225 FEDMREK-FPPNLRYFTSLLYGWCR-EGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYA 282
Query: 143 CYG 145
G
Sbjct: 283 HAG 285
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 27 LEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
LEP+ + ++ A K+ + + M EK PN ++ G CRE + EA+
Sbjct: 198 LEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAK 256
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
EV +MK G PD +T+L+ D D ++ +M RGF P+V Y LI+A
Sbjct: 257 EVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD-LMNDMRKRGFEPNVNCYTVLIQA 315
Query: 141 YC 142
C
Sbjct: 316 LC 317
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M + GV+PN N +I G C+ EA + EM+ +PD TYT LI+ LC
Sbjct: 326 LFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLC 385
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+D+ +A+++ ++M + PS YN LI YC
Sbjct: 386 -IEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYC 420
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 26 SLEPESWPNTMMISA---KKKVA---GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
+L P+ + T++I+ + +VA L M + + P+S + N +I G C+E+ ++A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
++ EM G P+ T+++LID C+ D A + EM +G P VV Y LI
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRD-IKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 140 AY 141
A+
Sbjct: 488 AH 489
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ MT G++PN I LCR+ + +EAE++FE MK+ G P+ TY+++ID C
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ +A + +E++ P+VV + L+ +C
Sbjct: 281 KTGN-VRQAYGLYKEILVAELLPNVVVFGTLVDGFC 315
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
GL+S M + P+ + +I GLC E + EA +F++MK + P TY SLI
Sbjct: 359 VGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHG 418
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
C + ++A + EM G P+++ ++ LI YC
Sbjct: 419 YCK-EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L S MT GVEPN + + +I G C K A ++ EM KG PD TYT+LID
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID--A 488
Query: 107 DYDDKTDK-ADKVLREMIDRGFSPS 130
+ + K A ++ +M++ G P+
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPN 513
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ +M KG P+ + + +I G C+ R E+F EM R+G + TYT+LI C
Sbjct: 32 MLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 91
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D A +L EMI G +P + ++ ++ C
Sbjct: 92 QVGD-LDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + P + + N +I G C++ R +A+ + + M KG +PD T+++LI+ C
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA-K 59
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D ++ EM RG + V Y LI +C G
Sbjct: 60 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 94
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 50 AMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYD 109
+M ++G+ ++ + ++ GL + + +AEE+F EM+ KG APD +Y LI+
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 110 DKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
+ KA + EM++ G +P+V+ YN L+ +C G + K
Sbjct: 642 N-MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+ P+ + ++I+ K+ + A M E+G+ PN N ++ G CR ++A+
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
E+ +EM KG P+ TY ++ID C D + A ++ EM +G P Y L+
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE-AFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 141 YC 142
C
Sbjct: 742 CC 743
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K L M G+ P + + +I+G CRE ++ E+ EMK++ TY ++
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ +C D D A +++EMI G P+VV Y LI+ +
Sbjct: 424 VKGMCSSGD-LDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L+P ++ IS + + SA M E GV PN +I C++ + EA
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ M +G D KTYT L++ L +DK D A+++ REM +G +P V Y LI
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFK-NDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 141 YCCYGYCQ 148
+ G Q
Sbjct: 637 FSKLGNMQ 644
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M+ KG+ PN+ + +I G C+ EA +F+EMK KG PD YT+L+D C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+D ++A + +G + S +N LI +G
Sbjct: 744 RLND-VERAITIFGTN-KKGCASSTAPFNALINWVFKFG 780
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M KG+ P+ S +I G + ++A +F+EM +G P+ Y L+ C
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR-SG 676
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ +KA ++L EM +G P+ V Y +I YC G
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M G PN +I+ + R +A V +EMK +G APD Y SLI L
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ D+A L EM++ G P+ Y I Y
Sbjct: 499 K-AKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
LM ++ +PN + N +I LC+E + A+E+F +M+ P TYTSL++
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN--- 848
Query: 107 DYDDKTDKAD--KVLREMIDRGFSPSVVEYNKLIRAY 141
YD +A+ V E I G P + Y+ +I A+
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE-----EVFEEMKRKGFAPDEKTYTSL 101
+ S M EKG +PN+ V G +W +K + ++FEEM+ KG +P +Y+ +
Sbjct: 664 MFSIMAEKGSKPNA-----VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 718
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
ID LC + D+A + + ID P VV Y LIR YC G
Sbjct: 719 IDGLCK-RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ + E +EP+ + N +I G C R EAE +FE +K F P+ T T LI +LC
Sbjct: 594 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 653
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
+D D A ++ M ++G P+ V Y L+
Sbjct: 654 KNND-MDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M +G+ PN + +I+GLC++ R EA ++ ++ ++G P TY+SLID C +
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLI 138
+ +MI G+ P VV Y L+
Sbjct: 442 -LRSGFALYEDMIKMGYPPDVVIYGVLV 468
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L S KGV+ + + I + A V++ M +G +P+ TYT LI LC
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D + +A + +++ RG PS+V Y+ LI +C
Sbjct: 403 Q-DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE-----EVFEEMKRKGFAPDEKTYTSL 101
+ S M EKG +PN+ V G +W +K + ++FEEM+ KG +P +Y+ +
Sbjct: 693 MFSIMAEKGSKPNA-----VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 747
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
ID LC + D+A + + ID P VV Y LIR YC G
Sbjct: 748 IDGLCK-RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ + E +EP+ + N +I G C R EAE +FE +K F P+ T T LI +LC
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
+D D A ++ M ++G P+ V Y L+
Sbjct: 683 KNND-MDGAIRMFSIMAEKGSKPNAVTYGCLM 713
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M +G+ PN + +I+GLC++ R EA ++ ++ ++G P TY+SLID C +
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLI 138
+ +MI G+ P VV Y L+
Sbjct: 442 -LRSGFALYEDMIKMGYPPDVVIYGVLV 468
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L S KGV+ + + I + A V++ M +G +P+ TYT LI LC
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D + +A + +++ RG PS+V Y+ LI +C
Sbjct: 403 Q-DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 34 NTMM-----ISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR 88
NT+M +S + G+ M E+GVEP+ + N +I GL + R +EA + M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 89 KGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
G+ PD TYTSL++ +C + A +L EM RG +P+ YN L+ C
Sbjct: 329 AGYEPDTATYTSLMNGMCRKGESLG-ALSLLEEMEARGCAPNDCTYNTLLHGLC 381
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S + G +P+ N +++G C + EA V+++MK +G PD+ TY +LI L
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS 311
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ ++A L+ M+D G+ P Y L+ C G
Sbjct: 312 KA-GRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 35/139 (25%)
Query: 39 SAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTY 98
S+ V +++ M G+EP+ + + ++ LC R EA+++ +E+ K PD TY
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTY 197
Query: 99 TSLIDLLC-----------------DYDDKTDKA-----------DKVLREMI------- 123
L+ LC D+D K D K LRE +
Sbjct: 198 NFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 124 DRGFSPSVVEYNKLIRAYC 142
+ GF P YN +++ +C
Sbjct: 258 NAGFKPDCFLYNTIMKGFC 276
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K+ G M E G + S N ++ L + +A++VF++MK+K F PD K+YT L
Sbjct: 179 KEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTIL 238
Query: 102 IDLLCDYDDKTD--KADKVLREMIDRGFSPSVVEYNKLIRAYC 142
++ + + + + D+V REM D GF P VV Y +I A+C
Sbjct: 239 LE---GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHC 278
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M KGV PN+ + + ++ L R R+KEA EV++ M P TY ++ + C+ +
Sbjct: 363 MRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCN-KE 418
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D A K+ EM +G P + ++ LI A C
Sbjct: 419 RLDMAIKIWDEMKGKGVLPGMHMFSSLITALC 450
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A ++S M G+ P+ + + +I +E + EA++ + EM ++ P+ TY SLI+
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
LC + D+A KVL ++ +GF P+ V YN LI YC
Sbjct: 299 LCIH-GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC 335
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 37 MISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEK 96
++ AKK+ + M ++ V PN + N +I GLC EA++V + KGF P+
Sbjct: 270 LLEAKKQ----YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 97 TYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
TY +LI+ C + D K+L M G YN L + YC G
Sbjct: 326 TYNTLINGYCK-AKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M + G+ P+ + N +I L + + +M R G +PD T+++LID+
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY- 264
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
+ + +A K EMI R +P++V YN LI C +G K
Sbjct: 265 GKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G EPN N +I LC + + A +V + MK+ G PD TY SLI L +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF-HSGTWGV 237
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ ++L +M+ G SP V+ ++ LI Y
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVY 264
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
+ M + G EP+ + ++ G C R EA + +++ G+ P+ Y ++ID LC+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
+ + A VL+ M G P VV YN LI
Sbjct: 197 -KGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M+ GV+ ++ + N + QG C+ + AE+V M G PD T+ L+D LC
Sbjct: 346 ILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLC 405
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D+ K KA L ++ ++ YN +I+ C
Sbjct: 406 DH-GKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M K V+PN+ N +I+ CR R A E+ E+MK KG +P+ TYTSLI +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM-SIIS 694
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ ++A + EM G P+V Y LI Y
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M ++G++P++ + + +I GL + +EA + +++ KR G PD TY+ +ID C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
++T++ + EM+ + P+ V YN LIRAYC
Sbjct: 622 K-AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E+G+EP + + +++GL R R +A V +EM +KGF P+ Y +LID +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE-AG 379
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+KA ++ M+ +G S + YN LI+ YC
Sbjct: 380 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 411
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L S M E GV PN + N VI GL R EA E+M +G P TY+ L+ L
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
D A VL+EM +GF P+V+ YN LI ++
Sbjct: 342 RAKRIGD-AYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M KG+ PNS + +I+G+ R +EA+ +FEEM+ +G P+ YT+LID
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
K + +LREM + P+ + Y +I Y
Sbjct: 731 MV-KVECLLREMHSKNVHPNKITYTVMIGGY 760
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M KG+ S + N +I+G C+ + AE + +EM GF ++ ++TS+I LLC +
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH-L 449
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D A + + EM+ R SP LI C +G
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 484
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + + P L +I GLC+ + +A E++ + KGF D +T +L+ LC+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE-AG 519
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K D+A ++ +E++ RG V YN LI C
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 54 KGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTD 113
KGV P+ I C+ + +EA ++F +M+ G AP+ T+ ++ID L + D
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL-GMCGRYD 312
Query: 114 KADKVLREMIDRGFSPSVVEYNKLIRA 140
+A +M++RG P+++ Y+ L++
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKG 339
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ MT+KG PN N +I +A E+ + M KG + TY +LI C
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 411
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
+ + D A+++L+EM+ GF+ + + +I C +
Sbjct: 412 K-NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M K V+PN+ N +I+ CR R A E+ E+MK KG +P+ TYTSLI +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM-SIIS 694
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ ++A + EM G P+V Y LI Y
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M ++G++P++ + + +I GL + +EA + +++ KR G PD TY+ +ID C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
++T++ + EM+ + P+ V YN LIRAYC
Sbjct: 622 K-AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E+G+EP + + +++GL R R +A V +EM +KGF P+ Y +LID +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE-AG 379
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+KA ++ M+ +G S + YN LI+ YC
Sbjct: 380 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 411
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L S M E GV PN + N VI GL R EA E+M +G P TY+ L+ L
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
D A VL+EM +GF P+V+ YN LI ++
Sbjct: 342 RAKRIGD-AYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M KG+ PNS + +I+G+ R +EA+ +FEEM+ +G P+ YT+LID
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
K + +LREM + P+ + Y +I Y
Sbjct: 731 MV-KVECLLREMHSKNVHPNKITYTVMIGGY 760
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M KG+ S + N +I+G C+ + AE + +EM GF ++ ++TS+I LLC +
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH-L 449
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D A + + EM+ R SP LI C +G
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 484
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + + P L +I GLC+ + +A E++ + KGF D +T +L+ LC+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE-AG 519
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K D+A ++ +E++ RG V YN LI C
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 54 KGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTD 113
KGV P+ I C+ + +EA ++F +M+ G AP+ T+ ++ID L + D
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGL-GMCGRYD 312
Query: 114 KADKVLREMIDRGFSPSVVEYNKLIRA 140
+A +M++RG P+++ Y+ L++
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKG 339
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ MT+KG PN N +I +A E+ + M KG + TY +LI C
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 411
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
+ + D A+++L+EM+ GF+ + + +I C +
Sbjct: 412 K-NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ MT++ ++P+ + N +I +E + +AEE++ EM R AP+ TYTSLI+ C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D+A ++ M +G P VV Y LI +C
Sbjct: 294 -MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFC 328
Score = 63.2 bits (152), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
++ +++ M E G++P+ +I LC+ A +F++M+ G PD YTSL
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
++ LC+ D AD +LR M R P V+ +N LI A+
Sbjct: 219 VNGLCNSGRWRD-ADSLLRGMTKRKIKPDVITFNALIDAF 257
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M++KG+ N+ + +IQG + + A+EVF M +G P+ +TY L+ LC Y+
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC-YNG 401
Query: 111 KTDKADKVLREMIDR---GFSPSVVEYNKLIRAYCCYG 145
K KA + +M R G +P++ YN L+ C G
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
+ + M + G EP+ + +I G C R +EA + +M G PD YT++ID
Sbjct: 127 SSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC + + A + +M + G P VV Y L+ C G
Sbjct: 187 LCK-NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M KG P+ + +I G C+ + +A ++F EM +KG + TYT+LI
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV-G 366
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K + A +V M+ RG P++ YN L+ C G
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M G+ P+ ++ GLC R ++A+ + M ++ PD T+ +LID
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ K A+++ EMI +P++ Y LI +C G
Sbjct: 259 K-EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRK---GFAPDEKTYTSLID 103
+ S M +GV PN + N ++ LC + K+A +FE+M+++ G AP+ TY L+
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 104 LLCDYDDKTDKADKVLREMIDR 125
LC Y+ K +KA V +M R
Sbjct: 434 GLC-YNGKLEKALMVFEDMRKR 454
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
GV + + N ++ C+ + A +M + GF PD T+TSLI+ C ++ ++
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC-LGNRMEE 160
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
A ++ +M++ G P VV Y +I + C G+
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGF--APDEKTYTSLIDLLCDY 108
M E +P+ + N +I LCR K+A + ++M+ GF PD TYT LI C Y
Sbjct: 191 MKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRY 250
Query: 109 DDKTD----------KADKVLREMIDRGFSPSVVEYNKLIRAYCC 143
+T +A+++ REM+ RGF P VV YN LI CC
Sbjct: 251 GMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDG-CC 294
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 57 EPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKAD 116
EPNS + + +I GLC + RT A E+ EMK KGF P+ K+Y SL++ + D A
Sbjct: 321 EPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFA-LSGEIDDAV 379
Query: 117 KVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K L EMI+ G + Y L+ C G
Sbjct: 380 KCLWEMIENGRVVDFISYRTLVDESCRKG 408
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 63.2 bits (152), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+EP T +I A KV LM A M + V P+ + +I GLC EA
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
++F M+R G P+E YT+LI C + + K+ EM +G + + Y LI+
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCK-SKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 141 YCCYG 145
YC G
Sbjct: 373 YCLVG 377
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M++KGV N+ + +IQG C R A+EVF +M + PD +TY L+D LC +
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC-CNG 412
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K +KA + M R ++V Y +I+ C G
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
+ + + M + G EP+ + ++ G C R ++A +F+++ GF P+ TYT+LI
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC + + A ++ +M G P+VV YN L+ C G
Sbjct: 196 RCLCK-NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M G PN + N ++ GLC R +A + +M ++ P+ T+T+LID
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K +A ++ MI P V Y LI C YG
Sbjct: 270 KV-GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 44 VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLID 103
V L M G+ P + N V+ +C + A +M + GF PD T+TSL++
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN 161
Query: 104 LLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
C + ++ + A + +++ GF P+VV Y LIR C
Sbjct: 162 GYCHW-NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A L+ M ++ +EPN + +I + + EA+E++ M + PD TY SLI+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
LC Y D+A ++ M G P+ V Y LI +C
Sbjct: 303 LCMY-GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFC 339
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ + M+ + P+ + N ++ GLC + ++A +FE M+++ + TYT +I +C
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K + A + + +G P+V+ Y +I +C G
Sbjct: 445 KL-GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M G P+ + +VI+G+C + EA + +EM KG+ PD TY + +LC
Sbjct: 363 LIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLC 422
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ + KTD+A K+ M++ +PSV YN LI +
Sbjct: 423 E-NRKTDEALKLYGRMVESRCAPSVQTYNMLISMF 456
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 45 AGLMSAMTEKGVE---PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
A L M KG P + + +I L + + +E E+ M G PD TY +
Sbjct: 323 ADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDV 382
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
I+ +C +K D+A K L EM ++G+ P +V YN +R C
Sbjct: 383 IEGMC-MAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLC 422
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 12/133 (9%)
Query: 26 SLEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
L P + T +I A K+ L A M + GVE N + +I GLC R KEA
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
EE+F +M G P+ +Y +LI + D+A ++L E+ RG P ++ Y I
Sbjct: 457 EELFGKMDTAGVIPNLASYNALIHGFVKAKN-MDRALELLNELKGRGIKPDLLLYGTFI- 514
Query: 140 AYCCYGYCQTQKL 152
+G C +K+
Sbjct: 515 ----WGLCSLEKI 523
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M G++PN S + ++ C+E ++A + + +M+R G P+E TYTSLID C +
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+D A ++ EM+ G +VV Y LI C
Sbjct: 418 LSD-AFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
GL M +G+ P++ + N +I G + R + FEEMK PD TY +LI+
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQ 148
C + K + REM G P+VV Y+ L+ A+C G Q
Sbjct: 343 CKF-GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M G P + N +I +C+E + A +FEEMK +G PD TY S+ID
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV-G 311
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D EM D P V+ YN LI +C +G
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M +G EPN++ +IQ LC+ R +EA +VF EM+R D TYT+L+ C
Sbjct: 309 LLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ K DK VL +MI +G PS + Y ++ A+
Sbjct: 369 KW-GKIDKCYIVLDDMIKKGLMPSELTYMHIMVAH 402
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M E G EP+ ++ G + +A ++ +M+R+GF P+ YT LI LC
Sbjct: 274 VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 333
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D+ ++A KV EM VV Y L+ +C +G
Sbjct: 334 KV-DRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG 371
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
KK ++ M + G EP+ ++ LC+ K+A ++FE+M+ + F + + +TSL
Sbjct: 200 KKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSL 258
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ C K +A VL +M + GF P +V+Y L+ Y G
Sbjct: 259 LYGWCRV-GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAG 301
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 59 NSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKV 118
N ++ G CR + EA+ V +M GF PD YT+L+ + D D +
Sbjct: 251 NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYD-L 309
Query: 119 LREMIDRGFSPSVVEYNKLIRAYC 142
LR+M RGF P+ Y LI+A C
Sbjct: 310 LRDMRRRGFEPNANCYTVLIQALC 333
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 57 EPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKAD 116
EP+ +++G CR EAE+VF+EMK G P+ TY+ +ID LC + +A
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRC-GQISRAH 310
Query: 117 KVLREMIDRGFSPSVVEYNKLIRAYCCYG--------YCQTQKL 152
V +M+D G +P+ + +N L+R + G Y Q +KL
Sbjct: 311 DVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 354
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
+RG+ AG IS +KV M G+EPN + + VI LCR +
Sbjct: 262 VRGWCRAGE-----------ISEAEKV---FKEMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
A +VF +M G AP+ T+ +L+ + +T+K +V +M G P + YN L
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVK-AGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 138 IRAYC 142
I A+C
Sbjct: 367 IEAHC 371
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 25 GSLEPESWPNTMMISAK------KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKE 78
+EP + +++I A + + + M + G PN+ + N +++ + RT++
Sbjct: 284 AGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEK 343
Query: 79 AEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
+V+ +MK+ G PD TY LI+ C D+ + A KVL MI + + +N +
Sbjct: 344 VLQVYNQMKKLGCEPDTITYNFLIEAHCR-DENLENAVKVLNTMIKKKCEVNASTFNTIF 402
Query: 139 R 139
R
Sbjct: 403 R 403
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K G+ + M E + P++ S N +I GLCR R EA ++FE+MK K PDE T+ +I
Sbjct: 413 KAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII 472
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
L K A KV +M+D+GF+ + LI+A C
Sbjct: 473 GGLIR-GKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 39 SAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTY 98
S +K L M +KG+ N + +I+ RE + A+++ ++M G +PD Y
Sbjct: 339 SNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFY 398
Query: 99 TSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
T+++D LC DKA V +MI+ +P + YN LI C
Sbjct: 399 TTILDHLCK-SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M ++G EP+ S +I GL R + +A E++ M R G +PD K +L+ LC +
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLC-HAR 198
Query: 111 KTDKADKVLREMIDRG-FSPSVVEYNKLIRAYCCYG 145
K D A +++ E I S V YN LI +C G
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 62 SLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLRE 121
S + +I+ CR T++A +FEEM++KG + TYTSLI + + A K+L +
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR-EGNSSVAKKLLDQ 385
Query: 122 MIDRGFSPSVVEYNKLIRAYC 142
M + G SP + Y ++ C
Sbjct: 386 MTELGLSPDRIFYTTILDHLC 406
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 64 NEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMI 123
N +I G C+ R ++AE + M + G PD TY L++ D ++ +A+ V+ EM+
Sbjct: 224 NALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYD-NNMLKRAEGVMAEMV 282
Query: 124 DRGFSPSVVEYNKLIRAYC-------CYGY 146
G YN+L++ +C CY +
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNF 312
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 15/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I GF AG +E K L S M++ G EP+ + N ++ K
Sbjct: 227 ISGFCKAGRIE--------------KAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLK 272
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
AE V EM R G D +Y L+ C + +++EM RGF VV Y+ L
Sbjct: 273 RAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTL 331
Query: 138 IRAYC 142
I +C
Sbjct: 332 IETFC 336
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + G +PN + +I GLC++ K+A E+ EEM R G+ P+ T+T+LID LC
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK-RG 336
Query: 111 KTDKADKVLREMI-DRGFSPSVVEYNKLIRAYC 142
T+KA ++ +++ + P+V Y +I YC
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC 369
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M+ +GV P+S S ++ G R+ + +EA+ M ++GF PD T T ++ LC+ +
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCE-NG 266
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
++A R+MID GF P+++ + LI C
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLC 298
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 27 LEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
E + N ++I+A K+ L + G+ P ++ +I C+E A
Sbjct: 494 FEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLAL 553
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ F MKR G PD TY SLI LC D+A K+ MIDRG SP V L
Sbjct: 554 KYFHNMKRHGCVPDSFTYGSLISGLCK-KSMVDEACKLYEAMIDRGLSPPEVTRVTLAYE 612
Query: 141 YC 142
YC
Sbjct: 613 YC 614
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 57 EPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKAD 116
+PN + +I G C+E + AE +F MK +G P+ TYT+LI+ C +A
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK-AGSFGRAY 413
Query: 117 KVLREMIDRGFSPSVVEYNKLIRAYC 142
+++ M D GF P++ YN I + C
Sbjct: 414 ELMNLMGDEGFMPNIYTYNAAIDSLC 439
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 38 ISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKT 97
I + G++ M +G+ P+S ++N V++ + AE VF+EM +G PD +
Sbjct: 160 IGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSS 219
Query: 98 YTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
Y L+ + C D K +AD+ L MI RGF P ++ A C
Sbjct: 220 Y-KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC 263
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
++ M ++G P++ + ++ LC A F +M GF P+ +TSLID LC
Sbjct: 240 LTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 299
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
+A ++L EM+ G+ P+V + LI C G+
Sbjct: 300 -KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + G E + N +I CR+ + KE+E +F+ + G P ++TYTS+I C D
Sbjct: 489 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 548
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D A K M G P Y LI C
Sbjct: 549 -IDLALKYFHNMKRHGCVPDSFTYGSLISGLC 579
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L S M E+G+ PN ++ +I G C+ A E+ M +GF P+ TY + ID LC
Sbjct: 380 LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC 439
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ +A ++L + G V Y LI+ C
Sbjct: 440 K-KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
LM+ M ++G PN + N I LC++ R EA E+ + G D TYT LI C
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+D ++A M GF + N LI A+C
Sbjct: 475 KQND-INQALAFFCRMNKTGFEADMRLNNILIAAFC 509
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+M M +KG++ N+ +LN ++ LC+E + EA + ++GF DE TY +LI +
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI-MGF 496
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
++K +KA ++ EM +P+V +N LI C +G
Sbjct: 497 FREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
LM AM ++P+ + N +I G + EA ++ E+M+ G ++ T+ + LC
Sbjct: 332 LMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLC 391
Query: 107 DYDDKTDKADKVLREMID-RGFSPSVVEYNKLIRAYCCYG 145
++K + + ++E++D GFSP +V Y+ LI+AY G
Sbjct: 392 K-EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + + P + N +I GLC +T+ A E F+E+ G PD+ T+ S+I C +
Sbjct: 512 MKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK-EG 570
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQ 148
+ +KA + E I F P N L+ C G +
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 34 NTMMISAKKK-----VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR 88
NT++ + KK + L+ M + G+ PN + N ++ G C+ KEA ++ E MK+
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 89 KGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
PD TY LI+ LC+ + + ++ M P VV YN LI
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLE-LMDAMKSLKLQPDVVTYNTLI 352
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 32 WPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRK-G 90
+P++ IS+ ++V M + GV N + N ++ G C E + ++A + E M +
Sbjct: 179 YPSSFSISSAREV---FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235
Query: 91 FAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
PD TY +++ + +D ++L +M G P+ V YN L+ YC G
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSD-LKELLLDMKKNGLVPNRVTYNNLVYGYCKLG 289
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 26 SLEPESWPNTMMISAKKKVAGLMSAMTEKGV----------EPNSDSLNEVIQGLCREWR 75
S +P+++ ++++ K MTEK + E ++ + N +I C++ +
Sbjct: 586 SFKPDNYTCNILLNGLCK-----EGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKK 640
Query: 76 TKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREM 122
KEA ++ EM+ KG PD TY S I LL + D K + D++L++
Sbjct: 641 LKEAYDLLSEMEEKGLEPDRFTYNSFISLLME-DGKLSETDELLKKF 686
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 56 VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKA 115
+ PN S N VI+ LC+ A EVF M + PD TY +L+D LC +++ D+A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK-EERIDEA 241
Query: 116 DKVLREMIDRGFSPSVVEYNKLIRAYC 142
+L EM G SPS V YN LI C
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLC 268
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S+M E+G N + +I GL +E + +EA ++ +M KG P+ Y+ L+D LC
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQ 148
+ K ++A ++L MI G P+ Y+ L++ + G C+
Sbjct: 409 R-EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 50 AMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYD 109
M E+ P+ + ++ GLC+E R EA + +EM+ +G +P Y LID LC
Sbjct: 212 GMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG 271
Query: 110 DKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D T + K++ M +G P+ V YN LI C G
Sbjct: 272 DLT-RVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M +G P+ N +I GLC++ ++ + M KG P+E TY +LI LC
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
K DKA +L M+ P+ V Y LI
Sbjct: 304 -LKGKLDKAVSLLERMVSSKCIPNDVTYGTLING 336
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M EKG +PN + ++ GLCRE + EA+E+ M G P+ TY+SL+
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK-TG 446
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
++A +V +EM G S + Y+ LI C G
Sbjct: 447 LCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L+ M PN + +I GL ++ R +A + M+ +G+ ++ Y+ LI
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLI 369
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
L + K ++A + R+M ++G P++V Y+ L+ C
Sbjct: 370 SGLFK-EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 49 SAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEM---KRKGFAPDEKTYTSLIDLL 105
S M G++P++ + + +I+GLC A +++ EM + PD TY L+D L
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
C D + D +L M+DRG P V+ N +
Sbjct: 551 CMQKDISRAVD-LLNSMLDRGCDPDVITCNTFL 582
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + G N + +I GLC R KEA V+ +M G PD Y+S+I LC
Sbjct: 458 MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS 517
Query: 111 KTDKADKVLREMI---DRGFSPSVVEYNKLIRAYC 142
D A K+ EM+ + P VV YN L+ C
Sbjct: 518 -MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M ++G+ PN + + +I GLC+ R +AE EM K P+ T+++LID
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
K K D V + MI P+V Y+ LI C +
Sbjct: 130 K-RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMH 166
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
M M + G+EP+ + + ++ G C K+A V +M++ G D T LID LC
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ A +VL+ M DRG SP+VV Y+ LI C G
Sbjct: 61 -NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSG 97
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
KV + M + ++PN + + +I GLC R EA ++ + M KG P+ TY++L
Sbjct: 136 KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLA 195
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ + D K+L +M RG + + V N LI+ Y
Sbjct: 196 NGFFK-SSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
+ GF + S++ + VAG M M G++ + +I LC+
Sbjct: 20 VNGFCLSNSIKDAVY-----------VAGQMEKM---GIKRDVVVDTILIDTLCKNRLVV 65
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
A EV + MK +G +P+ TY+SLI LC D A++ L EM + +P+V+ ++ L
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLAD-AERRLHEMDSKKINPNVITFSAL 124
Query: 138 IRAYCCYG 145
I AY G
Sbjct: 125 IDAYAKRG 132
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
+ E G +P+ N V+ L E R + V+ +MKR GF P+ TY L+ LC ++
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK-NN 195
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K D A K+L EM ++G P V Y +I + C G
Sbjct: 196 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 27 LEPESWPNTMMISA---KKKVAG---LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
EP + +++ A KV G L+ M+ KG P++ S VI +C KE
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
E+ E F P Y +LI+ LC D A +++REM+++G SP+V+ Y+ LI
Sbjct: 237 ELAER-----FEPVVSVYNALINGLCKEHDYKG-AFELMREMVEKGISPNVISYSTLINV 290
Query: 141 YCCYG 145
C G
Sbjct: 291 LCNSG 295
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 29 PESWPNTMMISAKKKVAGLMSAMTEKG--VEPNSDSLNEVIQGLCREWRTKEAEEVFEEM 86
P++ T +IS+ +V GL+ E EP N +I GLC+E K A E+ EM
Sbjct: 214 PDAVSYTTVISSMCEV-GLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREM 272
Query: 87 KRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
KG +P+ +Y++LI++LC+ + + A L +M+ RG P++ + L++
Sbjct: 273 VEKGISPNVISYSTLINVLCN-SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG 325
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
LM M EKG+ PN S + +I LC + + A +M ++G P+ T +SL+ C
Sbjct: 268 LMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG-C 326
Query: 107 DYDDKTDKADKVLREMIDRGFS--PSVVEYNKLIRAYCCYG 145
T A + +MI RGF P+VV YN L++ +C +G
Sbjct: 327 FLRGTTFDALDLWNQMI-RGFGLQPNVVAYNTLVQGFCSHG 366
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I GFA GSL+ + + + M G PN +++ LCR + K
Sbjct: 394 INGFAKRGSLDGAVY--------------IWNKMLTSGCCPNVVVYTNMVEALCRHSKFK 439
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRG-FSPSVVEYNK 136
EAE + E M ++ AP T+ + I LCD + D A+KV R+M + P++V YN+
Sbjct: 440 EAESLIEIMSKENCAPSVPTFNAFIKGLCD-AGRLDWAEKVFRQMEQQHRCPPNIVTYNE 498
Query: 137 LI 138
L+
Sbjct: 499 LL 500
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G++PN + N ++QG C +A VF M+ G +P+ +TY SLI+ D
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK-RGSLDG 405
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYC 142
A + +M+ G P+VV Y ++ A C
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALC 433
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 11/131 (8%)
Query: 18 IRGFAAAGSLEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLC 71
IRGF L+P ++ K + S M E G PN + +I G
Sbjct: 343 IRGFG----LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 72 REWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSV 131
+ A ++ +M G P+ YT++++ LC + K +A+ ++ M +PSV
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH-SKFKEAESLIEIMSKENCAPSV 457
Query: 132 VEYNKLIRAYC 142
+N I+ C
Sbjct: 458 PTFNAFIKGLC 468
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M KG+ P+ S ++ GLC+ A + MKR G TYT +ID LC +
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK-NG 457
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
D+A +L EM G P +V Y+ LI +C G +T K
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 498
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M KGV+ + + N +I LCR R + + +M+++ P+E TY +LI+
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ + K A ++L EM+ G SP+ V +N LI + G
Sbjct: 350 N-EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 387
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 15/124 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I A GS E S+ LM M + G P + N V+ C++ R K
Sbjct: 240 INVLCAEGSFEKSSY--------------LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
A E+ + MK KG D TY LI LC ++ K +LR+M R P+ V YN L
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCR-SNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 138 IRAY 141
I +
Sbjct: 345 INGF 348
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M+ G++ + S N +I GLC + A E++EEMK GF + TY +LI L
Sbjct: 1026 LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Query: 107 DYDDKTDKADKVLREMIDRGFSPSV 131
+ AD +L++++ RGF S+
Sbjct: 1086 ARETAFSGADIILKDLLARGFITSM 1110
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G P+ + N ++ + + +EM ++ PD T+ LI++LC + +K
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCA-EGSFEK 251
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ ++++M G++P++V YN ++ YC
Sbjct: 252 SSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++AM GV PN N ++ CRE R ++E++ E+M+ +G PD T+ S I LC
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 107 DYDDKTDKADKVLREM-IDRGFS---PSVVEYNKLIRAYCCYGYCQTQK 151
+ K A ++ +M +D P+ + YN +++ +C G + K
Sbjct: 264 K-EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAK 311
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L+P+S + I K + SA M +KG + ++ N +I GL + + E
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ +EMK KG +P+ TY + I LC+ +K + A +L EM+ + +P+V + LI A
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCE-GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Query: 141 YC 142
+C
Sbjct: 674 FC 675
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
++ GLM M EKG+ PN + N IQ LC + ++A + +EM +K AP+ ++ LI
Sbjct: 612 EIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Query: 103 DLLC---DYDDKTD------------------------------KADKVLREMIDRGFSP 129
+ C D+D + KA ++L ++DRGF
Sbjct: 672 EAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Query: 130 SVVEYNKLIRAYC 142
Y L+ + C
Sbjct: 732 GTFLYKDLVESLC 744
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 44 VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLID 103
V+ L M G+ P + + N +I+ LC A E+F+EM KG P+E T+ L+
Sbjct: 131 VSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVR 190
Query: 104 LLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
C TDK ++L M G P+ V YN ++ ++C
Sbjct: 191 GYCKA-GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 7/129 (5%)
Query: 29 PESWPNTMMISAKKKVAGLMSAMTE-KGVEPNSD-----SLNEVIQGLCREWRTKEAEEV 82
P S +M+ KV L A T + + N D S N +QGL R + EAE V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
++M KG P +Y L+D LC +D A ++ M G P V Y L+ YC
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSD-AKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 143 CYGYCQTQK 151
G K
Sbjct: 408 SVGKVDAAK 416
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ MT+KG+ P+ S N ++ GLC+ +A+ + MKR G PD TY L+ C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
K D A +L+EM+ P+ N L+ +
Sbjct: 408 SV-GKVDAAKSLLQEMMRNNCLPNAYTCNILLHS 440
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M + ++P+S + N I C++ + A V ++M++KG +TY SLI L
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI-LGL 604
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
++ + ++ EM ++G SP++ YN I+ Y C G
Sbjct: 605 GIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ-YLCEG 642
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 50 AMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYD 109
++ E P+ + + ++ GLC+ R EA+ +F EM + PD Y I C
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCK-Q 572
Query: 110 DKTDKADKVLREMIDRGFSPSVVEYNKLI 138
K A +VL++M +G S+ YN LI
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLI 601
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
+R FA AG E + G+ + E G+E N++S+N ++ LC+E R +
Sbjct: 162 MRRFAGAGEWE--------------EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVE 207
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
+A V ++K P+ T+ I C ++ ++A ++EM GF P V+ Y +
Sbjct: 208 QARVVLLQLK-SHITPNAHTFNIFIHGWCK-ANRVEEALWTIQEMKGHGFRPCVISYTTI 265
Query: 138 IRAYC 142
IR YC
Sbjct: 266 IRCYC 270
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
KV ++S M G PNS + ++ L + +EA V MKR G PD Y LI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 103 DLLCDYDDKTDKADKVLR-EMIDRGFSPSVVEYNKLIRAYCCY 144
L + ++A++V R EM + G S + YN +I YC +
Sbjct: 337 HTLAR-AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
+R FA AG E + G+ + E G+E N++S+N ++ LC+E R +
Sbjct: 162 MRRFAGAGEWE--------------EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVE 207
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
+A V ++K P+ T+ I C ++ ++A ++EM GF P V+ Y +
Sbjct: 208 QARVVLLQLK-SHITPNAHTFNIFIHGWCK-ANRVEEALWTIQEMKGHGFRPCVISYTTI 265
Query: 138 IRAYC 142
IR YC
Sbjct: 266 IRCYC 270
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
KV ++S M G PNS + ++ L + +EA V MKR G PD Y LI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 103 DLLCDYDDKTDKADKVLR-EMIDRGFSPSVVEYNKLIRAYCCY 144
L + ++A++V R EM + G S + YN +I YC +
Sbjct: 337 HTLAR-AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 378
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 37 MISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEK 96
+I K ++ M E+G+ PN + N +++G R + + A E F EMK++ D
Sbjct: 207 LIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVV 266
Query: 97 TYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
TYT+++ + +A V EMI G PSV YN +I+ C
Sbjct: 267 TYTTVVHGF-GVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLC 311
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 15/124 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
+ GF AG + K+ + M +GV P+ + N +IQ LC++ +
Sbjct: 272 VHGFGVAGEI--------------KRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVE 317
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
A +FEEM R+G+ P+ TY LI L + + + +++++ M + G P+ YN +
Sbjct: 318 NAVVMFEEMVRRGYEPNVTTYNVLIRGLF-HAGEFSRGEELMQRMENEGCEPNFQTYNMM 376
Query: 138 IRAY 141
IR Y
Sbjct: 377 IRYY 380
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 22 AAAGSLEPESW--------------PNTMMISAKK--------KVAGLMSAMTEKGVEPN 59
AA L P W P T I A++ K L M E G +
Sbjct: 101 AARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQD 160
Query: 60 SDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVL 119
S N ++ LC+ R ++A E+F + R F+ D TY +++ C +T KA +VL
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWC-LIKRTPKALEVL 218
Query: 120 REMIDRGFSPSVVEYNKLIRAY 141
+EM++RG +P++ YN +++ +
Sbjct: 219 KEMVERGINPNLTTYNTMLKGF 240
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E GV N+ N +I G C+ + EAE++F M PD TY +L+D C
Sbjct: 357 MIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR-AG 415
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D+A K+ +M + P+V+ YN L++ Y G
Sbjct: 416 YVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 37 MISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEK 96
MI + + ++ M+E+GV N + +I+G C++ +EAE VFE +K K D+
Sbjct: 273 MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQH 332
Query: 97 TYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
Y L+D C D A +V MI+ G + N LI YC G
Sbjct: 333 MYGVLMDGYCRTGQIRD-AVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 35 TMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEM-KRKGFAP 93
T + +K + ++ +K + PN+ N I GLC+ + ++A ++F ++ F P
Sbjct: 694 TTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP 753
Query: 94 DEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
DE TYT LI C +KA + EM +G P++V YN LI+ C G
Sbjct: 754 DEYTYTILIHG-CAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG 804
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 29 PESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P+ + T++I K L M KG+ PN + N +I+GLC+ A+ +
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRL 812
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGF 127
++ +KG P+ TY +LID L +A ++ +MI++G
Sbjct: 813 LHKLPQKGITPNAITYNTLIDGLVK-SGNVAEAMRLKEKMIEKGL 856
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M + G++PN + N +I G CR + +EA +VF EMK AP+ TY +LI+
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
D + A + +M+ G ++ YN LI +G C+ K
Sbjct: 355 QQGDH-EMAFRFYEDMVCNGIQRDILTYNALI-----FGLCKQAK 393
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 56 VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKA 115
+ PN +LN V+ G CR + + E+ ++M+R GF + +Y +LI C+ A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE-KGLLSSA 292
Query: 116 DKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
K+ M G P+VV +N LI +G+C+ KL
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLI-----HGFCRAMKL 324
Score = 52.8 bits (125), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K A + + ++ + PNS + + +I G C E+++ M R G P+E+T+ L
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 102 IDLLCDYDDKTDKADKVLREMIDR 125
+ C +D D A +VLREM+ R
Sbjct: 455 VSAFCRNED-FDGASQVLREMVRR 477
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M G++ + + N +I GLC++ +T++A + +E+ ++ P+ T+++LI C
Sbjct: 369 MVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC-VRK 427
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D+ ++ + MI G P+ +N L+ A+C
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M + G++PN + N +I G CR + +EA +VF EMK AP+ TY +LI+
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
D + A + +M+ G ++ YN LI +G C+ K
Sbjct: 355 QQGDH-EMAFRFYEDMVCNGIQRDILTYNALI-----FGLCKQAK 393
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 56 VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKA 115
+ PN +LN V+ G CR + + E+ ++M+R GF + +Y +LI C+ A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE-KGLLSSA 292
Query: 116 DKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
K+ M G P+VV +N LI +G+C+ KL
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLI-----HGFCRAMKL 324
Score = 52.8 bits (125), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K A + + ++ + PNS + + +I G C E+++ M R G P+E+T+ L
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 102 IDLLCDYDDKTDKADKVLREMIDR 125
+ C +D D A +VLREM+ R
Sbjct: 455 VSAFCRNED-FDGASQVLREMVRR 477
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M G++ + + N +I GLC++ +T++A + +E+ ++ P+ T+++LI C
Sbjct: 369 MVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC-VRK 427
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D+ ++ + MI G P+ +N L+ A+C
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 46 GLMSAMTE-KGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
LM M E KG+EPN + N +I+ LC+ +T+EA++VF+EM KG P +TY + + +
Sbjct: 358 NLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRI 417
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
L ++ ++L +M G P+V Y LIR C
Sbjct: 418 L----RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLC 451
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M E ++ ++ N +I GLC+ + EA +F + G PD +TY +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+A+K+ EMI RG P + YN +I +G C+ KL
Sbjct: 59 ---SSLGRAEKLYAEMIRRGLVPDTITYNSMI-----HGLCKQNKL 96
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 27 LEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
++P S +MIS +V +++ M ++GV + N IQ LC+ ++KEA+
Sbjct: 218 IKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAK 277
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ + M G P+ TY+ LI C+ DD ++A K+ + M++RG P Y LI
Sbjct: 278 ALLDGMLSAGMKPNTVTYSHLIHGFCNEDD-FEEAKKLFKIMVNRGCKPDSECYFTLIY- 335
Query: 141 YCCYG 145
Y C G
Sbjct: 336 YLCKG 340
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+++ M KG++PNS S +I G E ++ E +V MK +G TY I LC
Sbjct: 209 IVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLC 268
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K+ +A +L M+ G P+ V Y+ LI +C
Sbjct: 269 K-RKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 303
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G+EP+ ++ N +I+ C + + EM+RKG P+ ++ +I +DK+D+
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFY-AEDKSDE 240
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYC 142
KVL M DRG + V YN I++ C
Sbjct: 241 VGKVLAMMKDRGVNIGVSTYNIRIQSLC 268
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K+ L+ M G++PN+ + + +I G C E +EA+++F+ M +G PD + Y +L
Sbjct: 274 KEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTL 333
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPS 130
I LC D + A + +E +++ + PS
Sbjct: 334 IYYLCKGGD-FETALSLCKESMEKNWVPS 361
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E ++P + N ++ GL + + +EA E+FE M +KG P+ T+ +L D LC D+
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLI 138
T A K+L +M+D G P V YN +I
Sbjct: 624 VT-LALKMLFKMMDMGCVPDVFTYNTII 650
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMK-RKGFAPDEKTYTSLIDLLCDYD 109
+ E G+ P+ N +I GL + R +EA +F EMK +G PD TY SLI L
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI-LNLGIA 1045
Query: 110 DKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
++A K+ E+ G P+V +N LIR Y G
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M + G PN N +I G + A +F+ M ++G PD KTY+ L+D LC
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ D+ +E+ + G +P VV YN +I
Sbjct: 973 -MVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 26 SLEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
++P ++ + I K +SA M KG+ PN + N + L + R +EA
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
+++F +K G PD TY ++ + D+A K+L EM++ G P V+ N LI
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE-IDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 140 A 140
Sbjct: 547 T 547
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 26 SLEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
L+P + T+ I + + A M ++G P+ + +I LC + A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
+EVFE+MK PD TY +L+D D D D + EM G P VV + L+
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRD-LDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 140 AYC 142
A C
Sbjct: 372 ALC 374
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 34 NTMMISAKKK-----VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR 88
+++M+ K+ V GL+ M G++PN + I+ L R + EA E+ + M
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 89 KGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
+G PD TYT LID LC K D A +V +M P V Y L+
Sbjct: 287 EGCGPDVVTYTVLIDALCT-ARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 48 MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCD 107
+ M + + PN + N ++ LC+ ++A+EVFE M R F PD KTY+ L++
Sbjct: 191 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGK 249
Query: 108 YDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ KA +V REMID G P +V Y+ ++ C G
Sbjct: 250 -EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAG 286
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K V ++ M KGV PNS S N +++ L EA +VF +M K PD TYT +
Sbjct: 359 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMV 417
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
I + C+ + + ADKV + M +G PS+ ++ LI C
Sbjct: 418 IKMFCE-KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLC 457
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 54 KGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTD 113
K EP++D+ VI+ C + + A++V++ M++KG P T++ LI+ LC+ + T
Sbjct: 405 KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCE-ERTTQ 463
Query: 114 KADKVLREMIDRGFSPSVVEYNKL 137
KA +L EMI+ G PS V + +L
Sbjct: 464 KACVLLEEMIEMGIRPSGVTFGRL 487
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
LM+ M + +PN + + +I LCR+ + +EA + + MK KG PD +Y LI C
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ + D A + L MI G P +V YN ++ C G
Sbjct: 380 R-EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
+ EK +P+ + N +I G C+ R +A V + M+ K F+PD TY +I LC
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS-RG 207
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
K D A KVL +++ P+V+ Y LI A
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEA 237
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ + E G PNS S N + L A + EM G PDE TY S+I LC
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D+A ++L +M F PSVV YN ++ +C
Sbjct: 485 R-EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M EKG+ P++ S + +I CRE R A E E M G PD Y +++ LC
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 414
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ K D+A ++ ++ + G SP+ YN + A
Sbjct: 415 K-NGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 35 TMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPD 94
TM+ + LM M +G++P+ + N +I+G+C+E A E+ ++ KG PD
Sbjct: 238 TMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPD 297
Query: 95 EKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+Y L+ L + K ++ +K++ +M P+VV Y+ LI C
Sbjct: 298 VISYNILLRALLN-QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M G P+ + N V+ LC+ + +A E+F ++ G +P+ +Y ++ L
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
DK +A ++ EM+ G P + YN +I C
Sbjct: 450 SSGDKI-RALHMILEMMSNGIDPDEITYNSMISCLC 484
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 7/124 (5%)
Query: 29 PESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P S M SA K + ++ M G++P+ + N +I LCRE EA E+
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+M+ F P TY ++ C + + A VL M+ G P+ Y LI
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCK-AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Query: 143 CYGY 146
GY
Sbjct: 555 FAGY 558
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M KG P+ ++I+G +A V E +++ G PD Y +LI+ C
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 169
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ + D A +VL M + FSP V YN +I + C G
Sbjct: 170 KMN-RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
++ L+ +M G PN N VI GLC+ A EVF M++KG D TY +L
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
I L + TD A ++LR+M+ R P+V+ + LI +
Sbjct: 226 ISGLSNSGRWTDAA-RLLRDMVKRKIDPNVIFFTALIDTF 264
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 62 SLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLRE 121
+ N +IQGLCR + KEA +F + RKG PD Y ++I LC + + ADK+ R
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE-ADKLCRR 489
Query: 122 MIDRGFSPSVVEYNKLIR 139
M + GF PS Y++ +R
Sbjct: 490 MKEDGFMPSERIYDETLR 507
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A L+ M ++ ++PN +I +E EA +++EM R+ P+ TY SLI+
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
C + D A + M+ +G P VV YN LI +C
Sbjct: 299 FCIHGCLGD-AKYMFDLMVSKGCFPDVVTYNTLITGFC 335
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M +KG+ ++ + N +I GL R +A + +M ++ P+ +T+LID +
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK-EG 268
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+A + +EMI R P+V YN LI +C +G
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG 303
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M + V PN + N +I G C +A+ +F+ M KG PD TY +LI C
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 335
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+ + K+ EM +G YN LI +GYCQ KL
Sbjct: 336 K-SKRVEDGMKLFCEMTYQGLVGDAFTYNTLI-----HGYCQAGKL 375
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L MT +G+ ++ + N +I G C+ + A++VF M G +PD TY L+D LC
Sbjct: 346 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 405
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+ + K +KA ++ ++ ++ YN +I+ G C+T KL
Sbjct: 406 N-NGKIEKALVMVEDLQKSEMDVDIITYNIIIQ-----GLCRTDKL 445
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M+ KGV+PN+ + N +I C++ + KEA ++ M+ G PD TYTSLI C
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
D D+A ++ EM +G + V Y +I
Sbjct: 551 -IADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 42/160 (26%)
Query: 27 LEPESWPNTMMISAKKKVAG------LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L P S+ +I KV LM+ M KGV N +I G CR+ EA
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 81 EVFEEMKRKGFAPDEKT-----------------------------------YTSLIDLL 105
+++ M++KGF D T YT+LID+
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
C + ++A ++ EM +G P+ + YN +I AYC G
Sbjct: 480 CK-EGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKK------VAGLMSAMTEKGVEPNSDSLNEVIQGLC 71
I+ F+ G ++PE++ +I+A K V G++ M + GV N + +++
Sbjct: 247 IKEFSVKG-IKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSV 305
Query: 72 REWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSV 131
+ + +AE++F+EM+ +G D YTSLI C + +A + E+ ++G SPS
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN-MKRAFLLFDELTEKGLSPSS 364
Query: 132 VEYNKLIRAYCCYG 145
Y LI C G
Sbjct: 365 YTYGALIDGVCKVG 378
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M E+G+E + +I CR+ K A +F+E+ KG +P TY +LID +C
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC 375
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ A+ ++ EM +G + + V +N LI YC G
Sbjct: 376 KVGE-MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG 413
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAK------KKVAGLMSAMTEKGVEPNSDSLNEVIQGLC 71
+R A ++P+S+ T +I + + L S M KG++ NS + +I GL
Sbjct: 526 LRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLS 585
Query: 72 REWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
+ ++ EA +++EMKRKG+ D K YT+LI
Sbjct: 586 KAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E GV+ ++ S +I C+E +EA+ +F EM KG P+ TY +I C
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK-QG 518
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
K +A K+ M G P Y LI C
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 37/136 (27%)
Query: 42 KKVAGLMSAMTEK-----------------------------------GVEPNSDSLNEV 66
+K L+S M EK GV PN + N
Sbjct: 220 EKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSF 279
Query: 67 IQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRG 126
I G RE R +EA +F E+K + TYT+LID C +D D+A ++ M RG
Sbjct: 280 IHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMND-IDEALRLREVMESRG 337
Query: 127 FSPSVVEYNKLIRAYC 142
FSP VV YN ++R C
Sbjct: 338 FSPGVVTYNSILRKLC 353
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+EP++ +I+A K+ ++SA M E G++ + S +I G C+ + A+
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAK 432
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
E M KGF+P TY+ L+D + +K D+ K+L E RG V Y LIR
Sbjct: 433 EELFSMIEKGFSPGYATYSWLVDGFYN-QNKQDEITKLLEEFEKRGLCADVALYRGLIRR 491
Query: 141 YC 142
C
Sbjct: 492 IC 493
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M +G P + N +++ LC + R +EA + EM K PD T +LI+ C
Sbjct: 329 LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYC 388
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+D A KV ++MI+ G + Y LI +C
Sbjct: 389 KIEDMVS-AVKVKKKMIESGLKLDMYSYKALIHGFC 423
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 35/126 (27%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMK----------------------- 87
M GV PN + N I G RE R +EA +F E+K
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 88 -----------RKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNK 136
+GF+P TY S++ LC+ D + +A+++L EM + P + N
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCE-DGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 137 LIRAYC 142
LI AYC
Sbjct: 383 LINAYC 388
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G++P+ + ++ L ++ T ++F++M + G + Y L+ C +K
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHA-CSKSGDPEK 221
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYC 142
A+K+L EM ++G P + YN LI YC
Sbjct: 222 AEKLLSEMEEKGVFPDIFTYNTLISVYC 249
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 56 VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKA 115
+ PNS S N +I+G + + A +VF+EM P TY SLI LC DD KA
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDD-MGKA 240
Query: 116 DKVLREMIDRGFSPSVVEYNKLIRAYCCYG-YCQTQKL 152
+L +MI + P+ V + L++ CC G Y + +KL
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKL 278
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L+ M +K + PN+ + +++GLC + EA+++ +M+ +G P Y L+
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 298
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
L + D+A +L EM R P VV YN L+ C
Sbjct: 299 SDL-GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLC 337
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 53 EKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAP-DEKTYTSLIDLLCDYDDK 111
EKG + + ++ LC+E R EA+++ EM KG P D TYT++++ C +
Sbjct: 411 EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE- 469
Query: 112 TDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
DKA K+L+ M G P+ V Y L+ C G
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L+ M G +PN+ S ++ G+CR ++ EA E+ + ++P+ TY+ ++
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIM 531
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
L + K +A V+REM+ +GF P VE N L+++ C
Sbjct: 532 HGL-RREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 570
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+M+ E PNS + + ++ GL RE + EA +V EM KGF P L+ LC
Sbjct: 511 MMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 570
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
D +T +A K + E +++G + +VV + +I +G+CQ +L
Sbjct: 571 R-DGRTHEARKFMEECLNKGCAINVVNFTTVI-----HGFCQNDEL 610
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K + M G+ PN + N +I+G C R +EA E+ E+M KG PD+ +Y ++
Sbjct: 294 EKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTI 353
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
+ LC + D + + + G P V YN LI
Sbjct: 354 MGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIH 391
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 34/129 (26%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M KG P +N ++Q LCR+ RT EA + EE KG A + +T++I C D+
Sbjct: 550 MVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDE 609
Query: 111 ----------------------------------KTDKADKVLREMIDRGFSPSVVEYNK 136
+ +A +++++M+ +G P+ V Y
Sbjct: 610 LDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRT 669
Query: 137 LIRAYCCYG 145
+I YC G
Sbjct: 670 VIHRYCQMG 678
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 43 KVAGLMSAMT-EKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+V LM M E G+ P+ + N +I L + EA ++ + KGF D+ Y+++
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGF-SPSVVEYNKLIRAYCCYG 145
+ LC + + +A ++ EM+ +G P VV Y ++ +C G
Sbjct: 425 VHALCK-EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 468
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
IR F G +E +A+K+V + M KGV P+ ++ N +I G R++
Sbjct: 431 IRRFCELGEME----------NAEKEV----NKMKLKGVSPSVETYNILIGGYGRKYEFD 476
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
+ ++ +EM+ G P+ +Y +LI+ LC K +A V R+M DRG SP V YN L
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCK-GSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 138 IRAYCCYG 145
I C G
Sbjct: 536 IDGCCSKG 543
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 54 KGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTD 113
KG+ PN N +I G CR+ A E M+++G PD Y LI C+ + +
Sbjct: 383 KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGE-ME 441
Query: 114 KADKVLREMIDRGFSPSVVEYNKLIRAY 141
A+K + +M +G SPSV YN LI Y
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGY 469
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M ++GV P N +I G C + + ++A +EM +KG + TY +LID L
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL-SMTG 578
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQ 148
K +A+ +L E+ +G P V YN LI Y G Q
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
G+ + GV+ N+ + + ++ LC+E + ++AEE+ KG P+E Y ++ID
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
C D K+ M +G P + YN LIR +C G
Sbjct: 400 CRKGDLVGARMKI-EAMEKQGMKPDHLAYNCLIRRFCELG 438
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M + G PN S +I LC+ + EA+ V +M+ +G +P + Y LID C
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K + A + +EM+ +G ++V YN LI G
Sbjct: 541 S-KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + M + P+ N +I GLC+ R +AE++F+EM + P TY +LID C
Sbjct: 201 LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC 260
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ +K+ KV M PS++ +N L++
Sbjct: 261 KAGN-PEKSFKVRERMKADHIEPSLITFNTLLKG 293
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M +KG+E N + N +I GL + EAE++ E+ RKG PD TY SLI +
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY-GFAG 613
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+ + EM G P++ Y+ LI G T++L
Sbjct: 614 NVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERL 655
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 36/130 (27%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLID------- 103
M +EP+ + N +++GL + ++AE V +EMK GF PD T++ L D
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 104 ----------------------------LLCDYDDKTDKADKVLREMIDRGFSPSVVEYN 135
LC + K +KA+++L + +G P+ V YN
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCK-EGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 136 KLIRAYCCYG 145
+I YC G
Sbjct: 394 TMIDGYCRKG 403
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
GV P+S + N +I G C+ EA +F++M+ PD TY ++ID LC K
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCR-AGKVKI 262
Query: 115 ADKVLREMIDRG--FSPSVVEYNKLIRAYC 142
A VL M+ + P+VV Y L+R YC
Sbjct: 263 AHNVLSGMLKKATDVHPNVVSYTTLVRGYC 292
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRK-GFAPDEKTYTSLIDLL 105
L M + G+ P+ + N ++ L + RT A ++F+EM+R G PD T+ +LI+
Sbjct: 160 LFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGF 219
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
C + D+A ++ ++M +P VV YN +I C G
Sbjct: 220 CK-NSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVF--EEMKRKGFAPDEKTYTSLIDLLCDY 108
M +G++PN+ + N +I+GL R E +++ FAPD T+ LI CD
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCD- 365
Query: 109 DDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D A KV +EM++ P Y+ LIR C
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 399
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 39 SAKKKVA-GLMSAMTEKG--VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDE 95
+ K K+A ++S M +K V PN S +++G C + EA VF +M +G P+
Sbjct: 257 AGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Query: 96 KTYTSLIDLLCDYDDKTDKADKVLREMID--RGFSPSVVEYNKLIRAYCCYGY 146
TY +LI L + + D+ +L D F+P +N LI+A+C G+
Sbjct: 317 VTYNTLIKGLSE-AHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGH 368
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
+ ++GV P++ N ++ GLC+ R A+ +F EM + PD Y +LID D
Sbjct: 441 LIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGD 500
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D+A KV +++G VV +N +I+ +C G
Sbjct: 501 -FDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSG 534
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ S EKGV+ + N +I+G CR EA M + PD+ TY+++ID
Sbjct: 507 VFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D A K+ R M P+VV Y LI +CC G
Sbjct: 567 KQQDMA-TAIKIFRYMEKNKCKPNVVTYTSLINGFCCQG 604
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Query: 20 GFAAAGSLEPESWPNTMMIS-----AKKKVA-GLMSAMTEKGVEPNSDSLNEVIQGLCRE 73
G+ A +P+ ++I+ KK+VA G + ++KG+ PN+ S +IQ C+
Sbjct: 334 GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKS 393
Query: 74 WRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVE 133
A ++ +M +G PD TY LI L D A + ++IDRG SP
Sbjct: 394 KEYDIASKLLLQMAERGCKPDIVTYGILIHGLV-VSGHMDDAVNMKVKLIDRGVSPDAAI 452
Query: 134 YNKLIRAYCCYGYCQTQKL 152
YN L+ C G KL
Sbjct: 453 YNMLMSGLCKTGRFLPAKL 471
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 54 KGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTD 113
KG PN N +I G C+ + A VF+E+K KGF P +T+ ++I+ C D
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV- 292
Query: 114 KADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
+D++L E+ +RG SV N +I A +GY
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY 325
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 21/145 (14%)
Query: 18 IRGFAAAGSLE---------------PESWPNTMMISAKKKVAGLMSA------MTEKGV 56
I+GF +G L+ P+ + + +I K + +A M +
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 57 EPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKAD 116
+PN + +I G C + K AEE F+EM+ + P+ TYT+LI L +KA
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646
Query: 117 KVLREMIDRGFSPSVVEYNKLIRAY 141
M+ P+ V +N L++ +
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGF 671
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
+V + + M + V PN + + +I G + KEA E+F E K G D Y++LI
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
D LC + A ++ EM G SP+VV YN +I A+
Sbjct: 557 DALCK-NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+++ M K + PN S + VI G + R EA +F EM+ G A D +Y +L+ +
Sbjct: 396 ILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT 455
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
++++A +LREM G VV YN L+ Y G
Sbjct: 456 KV-GRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 493
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K+VA M GV+P+ + N ++ R + A +F+EM + D +Y +L
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+D +C + D A ++L +M + P+VV Y+ +I + G
Sbjct: 381 LDAICK-GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 66 VIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDR 125
+I L + R+ E + EEM KG PD TY LI+ C +D ++ A++VL EM+++
Sbjct: 264 LISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEND-SESANRVLDEMVEK 322
Query: 126 GFSPSVVEYNKLIRAY 141
G P V+ YN ++ +
Sbjct: 323 GLKPDVISYNMILGVF 338
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
+V+ ++ M+EKG +P++ + N +I G C E ++ A V +EM KG PD +Y ++
Sbjct: 276 EVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMIL 335
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ K ++A + +M RG SP + Y + C
Sbjct: 336 GVFFRI-KKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 374
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M EKG++P+ S N ++ R + +EA +FE+M R+G +PD +Y + D LC
Sbjct: 315 VLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 374
Query: 107 DYDDKTDKADKVLREMIDRGFSP 129
+ + ++A +L EM+ +G+ P
Sbjct: 375 E-GLQFEEAAVILDEMLFKGYKP 396
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
IRGF G L SA+K L M +KG+ PN + N +I G +
Sbjct: 325 IRGFCEKGWLG----------SARK----LWFEMIKKGMRPNEFAYNVMIHGHFKRGEIS 370
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
E + EM R G+ + ++I C + K+D+A ++ + M + G +P+ + YN L
Sbjct: 371 LVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHG-KSDEAFEIFKNMSETGVTPNAITYNAL 429
Query: 138 IRAYC 142
I+ +C
Sbjct: 430 IKGFC 434
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 58 PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADK 117
P+ ++I+GLC + EA +F+ +K KG+APD YT++I C+ A K
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCE-KGWLGSARK 339
Query: 118 VLREMIDRGFSPSVVEYNKLIRAY 141
+ EMI +G P+ YN +I +
Sbjct: 340 LWFEMIKKGMRPNEFAYNVMIHGH 363
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 27 LEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
LEP ++ +++I ++ +++ M E N N +I GLC+ +T +A+
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 81 EVFEEM-KRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
E+ + + K K ++ +Y S+ID D TD A + REM + G SP+VV + LI
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGD-TDSAVETYREMSENGKSPNVVTFTSLIN 633
Query: 140 AYC 142
+C
Sbjct: 634 GFC 636
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
+ M +KG+EPN N ++ CR A +F EM KG P+ TY+ LID
Sbjct: 469 TSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDG 528
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
D+ + D V+ +M F + V YN +I C G QT K
Sbjct: 529 FFKNKDEQNAWD-VINQMNASNFEANEVIYNTIINGLCKVG--QTSK 572
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M+E G PN + +I G C+ R A E+ EMK D Y +LID C +D
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
A + E+ + G P+V YN LI + G
Sbjct: 676 -MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLG 709
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M G+ PN + ++ GLC+ R +A E+ +EMK KG D Y +LID C +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ A + E+++ G +PS YN LI + G
Sbjct: 670 -MESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S M +G+ PN S N V+ G CR+ A VF + KG P+ TY+ LID C
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID-GC 523
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
+ A +V+ M + V Y +I C G QT K
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG--QTSK 566
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 62 SLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLRE 121
S N +I G +E A +EEM G +P+ TYTSL++ LC +++ D+A ++ E
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK-NNRMDQALEMRDE 644
Query: 122 MIDRGFSPSVVEYNKLIRAYC 142
M ++G + Y LI +C
Sbjct: 645 MKNKGVKLDIPAYGALIDGFC 665
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G+ P+ ++ +IQG + + +EA ++F+E G A + +++ LC KTD+
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCK-QGKTDE 461
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYC 142
A ++L +M RG P+VV YN ++ +C
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHC 489
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGF-APDEKTYTSLIDLL 105
++S E+G EP+S + +Q C+ A + EMK K P ++TYTS+I L
Sbjct: 255 VLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI-LA 313
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D A ++ EM+ G S +VV LI +C
Sbjct: 314 SVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC 350
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 15/128 (11%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I GF AG +E AKK ++ M + G PN + + ++ G C+ + +
Sbjct: 275 INGFCRAGEVE----------RAKK----ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
EA++ F+E+K+ G D YT+L++ C + +TD+A K+L EM + YN +
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCR-NGETDEAMKLLGEMKASRCRADTLTYNVI 379
Query: 138 IRAYCCYG 145
+R G
Sbjct: 380 LRGLSSEG 387
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 47 LMSAMTEKGVE-PNSDSLNEVIQGLCREWRTKEAEEVFEEM-KRKGFAPDEKTYTSLIDL 104
++ M G+ PNS + + ++ L R+KEA E+FE+M ++G +PD T+ +I+
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMING 277
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
C + ++A K+L M G +P+V Y+ L+ +C G Q K
Sbjct: 278 FCRAGE-VERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFA-PDEKTYTSLIDLL 105
L+ A G++PN+ N +++ C+ A V EEMKR G + P+ TY++L+D L
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 106 CDYDDKTDKADKVLREMIDR-GFSPSVVEYNKLIRAYCCYGYCQTQK 151
+ ++ +A ++ +MI + G SP V +N +I +C G + K
Sbjct: 243 FAH-SRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAK 288
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 12/126 (9%)
Query: 31 SWPNTMMIS-----------AKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
S+PN++ S +K+ V ++++G+ P+ + N +I G CR + A
Sbjct: 228 SYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA 287
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
+++ + MK+ G P+ Y++L++ C K +A + E+ G V Y L+
Sbjct: 288 KKILDFMKKNGCNPNVYNYSALMNGFCKV-GKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 140 AYCCYG 145
+C G
Sbjct: 347 CFCRNG 352
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 38 ISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGF-APDEK 96
+ +K L+ M+ G EP+ + N +IQG C+ +A E+F+++K +PD
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 97 TYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
TYTS+I C K +A +L +M+ G P+ V +N L+ Y G
Sbjct: 279 TYTSMISGYCK-AGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
+ G+A AG M++A++ + M G P+ + +I G CR +
Sbjct: 319 VDGYAKAGE----------MLTAEE----IRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
+ ++EEM +G P+ TY+ LI+ LC+ +++ KA ++L ++ + P YN +
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCN-ENRLLKARELLGQLASKDIIPQPFMYNPV 423
Query: 138 IRAYCCYG 145
I +C G
Sbjct: 424 IDGFCKAG 431
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 24 AGSL-EPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRT 76
+GS+ P+ T MIS ++ + L+ M G+ P + + N ++ G +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 77 KEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNK 136
AEE+ +M G PD T+TSLID C + + ++ EM RG P+ Y+
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV-GQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 137 LIRAYC 142
LI A C
Sbjct: 388 LINALC 393
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L+ + K + P N VI G C+ + EA + EEM++K PD+ T+T LI
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
C + +A + +M+ G SP + + L+
Sbjct: 460 IGHC-MKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 38 ISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGF-APDEK 96
+ +K L+ M+ G EP+ + N +IQG C+ +A E+F+++K +PD
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 97 TYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
TYTS+I C K +A +L +M+ G P+ V +N L+ Y G
Sbjct: 279 TYTSMISGYCK-AGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
+ G+A AG M++A++ + M G P+ + +I G CR +
Sbjct: 319 VDGYAKAGE----------MLTAEE----IRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
+ ++EEM +G P+ TY+ LI+ LC+ +++ KA ++L ++ + P YN +
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCN-ENRLLKARELLGQLASKDIIPQPFMYNPV 423
Query: 138 IRAYCCYG 145
I +C G
Sbjct: 424 IDGFCKAG 431
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 24 AGSL-EPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRT 76
+GS+ P+ T MIS ++ + L+ M G+ P + + N ++ G +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 77 KEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNK 136
AEE+ +M G PD T+TSLID C + + ++ EM RG P+ Y+
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV-GQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 137 LIRAYC 142
LI A C
Sbjct: 388 LINALC 393
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L+ + K + P N VI G C+ + EA + EEM++K PD+ T+T LI
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
C + +A + +M+ G SP + + L+
Sbjct: 460 IGHC-MKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 44 VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLID 103
V L M + G+EP+ +LN +++G RT E+ EMK KGF P+ K+Y SL++
Sbjct: 232 VRSLFRQMVDSGIEPDVFALNCLVKG-----RTINTRELLSEMKGKGFVPNGKSYNSLVN 286
Query: 104 LLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D A K L EMI+ G + Y L+ C G
Sbjct: 287 AFA-LSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKG 327
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 15/128 (11%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
IRG ++G+ M++A G M M ++GV P+ + N +I LC+E +
Sbjct: 307 IRGLCSSGN----------MVAA----YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFD 352
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
EA ++ M+ G APD+ +Y +I LC + D ++A++ L M+ P V+ +N +
Sbjct: 353 EACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD-VNRANEFLLSMLKSSLLPEVLLWNVV 411
Query: 138 IRAYCCYG 145
I Y YG
Sbjct: 412 IDGYGRYG 419
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M++K V +S N +I+GLC A +M ++G PD TY +LI LC +
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCK-EG 349
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K D+A + M + G +P + Y +I+ C +G
Sbjct: 350 KFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+++ M GV+PN + N +I G + R +A V EM+ PD TY L+ C
Sbjct: 427 VLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAAC 486
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
A ++ EM+ RG P ++ Y +L+R C G
Sbjct: 487 TL-GHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKG 524
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M GV P + N ++ GLC+ ++A+ + EM+ G +P+ +Y +LI LC
Sbjct: 143 LRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLC 202
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
++ DKA + M G P+ V N ++ A C G
Sbjct: 203 SVNN-VDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K GL+ M E G PN S N +I+GLC +A +F M + G P+ T +
Sbjct: 173 EKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNII 232
Query: 102 IDLLCDYDDKTDKADKVLREMID 124
+ LC + K+L E++D
Sbjct: 233 VHALCQKGVIGNNNKKLLEEILD 255
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G+ PN + N +++ LC++ + A +V +E+ G P+ TYT+++ D +
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGD-MES 244
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
A +VL EM+DRG+ P Y L+ YC G
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLG 275
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A +M M + +EPN + +I+ LC+E ++ EA +F+EM + F PD +ID
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA 340
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC+ D K D+A + R+M+ P + LI C G
Sbjct: 341 LCE-DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 20 GFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
G+ A G +E SAK+ ++ M ++G P++ + ++ G C+ R EA
Sbjct: 235 GYVARGDME----------SAKR----VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
V ++M++ P+E TY +I LC + K+ +A + EM++R F P K+I
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCK-EKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 140 AYC 142
A C
Sbjct: 340 ALC 342
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
GL M + P++ L+ +I LC+E R EA ++F+E + KG P TY +LI +
Sbjct: 352 GLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGM 410
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
C+ + T+ A ++ +M +R P+ YN LI
Sbjct: 411 CEKGELTE-AGRLWDDMYERKCKPNAFTYNVLI 442
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G+ PN + ++ G + A+ V EEM +G+ PD TYT L+D C + +
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKL-GRFSE 279
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYC 142
A V+ +M P+ V Y +IRA C
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALC 307
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 44 VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLID 103
V L M + G+EP+ +LN +++G RT E+ EMK KGF P+ K+Y SL++
Sbjct: 207 VRSLFRQMVDSGIEPDVFALNCLVKG-----RTINTRELLSEMKGKGFVPNGKSYNSLVN 261
Query: 104 LLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D A K L EMI+ G + Y L+ C G
Sbjct: 262 AFA-LSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKG 302
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 29 PESWPNTMMISAKKKV------AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P++ T++I + K A LMS M + G++P + + +I G + + +EAE+
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
F M R G PD Y+ ++D+L ++T KA + R+MI G +PS Y +I
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLR-GNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 41/159 (25%)
Query: 28 EPESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEE 81
+P+ W MIS + L + KG P++ + N ++ RE T++ +E
Sbjct: 329 QPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE 388
Query: 82 VFEEMKRKGFAPDEKTYTSLIDL----------LCDYDD--------------------- 110
V+++M++ GF DE TY ++I + L Y D
Sbjct: 389 VYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Query: 111 ----KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+T +A ++ EM+D G P++ Y+ LI Y G
Sbjct: 449 GKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG 487
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
LM M G++P D+ +I ++ ++AE++FEE+ KG D Y +++ +
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQ 148
D + KA+K+L+ M + G P++ + L+ +Y G Q
Sbjct: 1044 DSGSDS-KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQ 1084
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L P++ ++SA + + L A M +P+ + N +I R EAE
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+F E++ KGF PD TY SL+ + T+K +V ++M GF + YN +I
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFAR-ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 141 Y 141
Y
Sbjct: 412 Y 412
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 18 IRGFAAAGS---------------LEPESWPNTMMISAKKKVA------GLMSAMTEKGV 56
IRGF G +EP++ ++IS +K L+ M KG
Sbjct: 244 IRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGC 303
Query: 57 EPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKAD 116
EPN + EV+ GL + R EA+E+ +M G P +Y ++ LC+ + D
Sbjct: 304 EPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVE-MD 362
Query: 117 KVLREMIDRGFSPSVVEYNKLIR 139
VLR+M++ GF P + + K+++
Sbjct: 363 WVLRQMVNHGFVPKTLMWWKVVQ 385
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 58 PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADK 117
PN + ++ GL ++ RT +A+++F++M +G +P+ TYT LI LC D A K
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ-RGSADDARK 254
Query: 118 VLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ EM G P V +N L+ +C G
Sbjct: 255 LFYEMQTSGNYPDSVAHNALLDGFCKLG 282
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 26 SLEPESWPNTMMISAKKKVAG------LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
+++P+ T++I K L+S+M KG+ P++ N VI+ LC +E
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
+ EM PD T+T LI +C + +A+++ E+ G SPSV +N LI
Sbjct: 393 RSLQLEMSETESFPDACTHTILICSMCR-NGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 140 AYCCYGYCQTQKL 152
C G + +L
Sbjct: 452 GLCKSGELKEARL 464
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA-----EEVFE-------EMKRK 89
K + L M +G+ P + + + + +GLCR W+ + E +FE +M+ +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 90 GFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
G PD+ TY ++I LC + A L M R S YN LI + C YGY
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSG-AFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I G+A +G +E + L + E G+ P+ + N +I G C+
Sbjct: 475 IDGYAKSGCIE--------------EALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
EA ++ + +K G AP +YT+L+D + + T D++ REM G P+ V Y+ +
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGN-TKSIDELRREMKAEGIPPTNVTYSVI 579
Query: 138 IRAYC 142
+ C
Sbjct: 580 FKGLC 584
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M +G+ P+ + N +IQ LCR A E MK + TY LID LC Y
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY-G 669
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
KAD + + ++ S S Y LI+A+C G
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG 704
Score = 49.7 bits (117), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL---IDLLCDYDDK 111
G+ P+ S N +I GLC EA E+ +M + G PD TY L LL
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL----GM 307
Query: 112 TDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
A +V+R+M+D+G SP V+ Y L+ C G
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG 341
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M +K + PNS + ++ GLC++ EA + + + G D Y +ID
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
++A ++ + +I+ G +PSV +N LI YGYC+TQ +
Sbjct: 480 K-SGCIEEALELFKVVIETGITPSVATFNSLI-----YGYCKTQNI 519
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M + G P S N +I GLC+ + EA +EM G+ PD KTY+ L+ LC
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D K D A ++ + + G V+ +N LI C G
Sbjct: 546 R-DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVG 583
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
+ + V PN + N +I GL + R + +++E MK+ D TY+SLI LCD +
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
DKA+ V E+ +R S VV YN ++ +C
Sbjct: 306 -VDKAESVFNELDERKASIDVVTYNTMLGGFC 336
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 34 NTMM---ISAKK--KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR 88
NT++ + AK+ KV L + GV PN + N +I+ C++ ++A + M +
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 89 KGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+GF PD +Y+++I+ L K D A ++ EM +RG +P V YN LI +
Sbjct: 178 EGFKPDVFSYSTVINDLAK-AGKLDDALELFDEMSERGVAPDVTCYNILIDGF 229
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K G+M + G + + +I LC++ R +EA + +EM + G + +L
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
I L D + +A LREM G P+VV YN LI C G
Sbjct: 471 IGGLIR-DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K G + M ++G +P+ S + VI L + + +A E+F+EM +G APD Y L
Sbjct: 166 EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
ID D + R + D P+V +N +I
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA-----EEVFE-------EMKRK 89
K + L M +G+ P + + + + +GLCR W+ + E +FE +M+ +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 90 GFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
G PD+ TY ++I LC + A L M R S YN LI + C YGY
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSG-AFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Score = 56.2 bits (134), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I G+A +G +E + L + E G+ P+ + N +I G C+
Sbjct: 475 IDGYAKSGCIE--------------EALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
EA ++ + +K G AP +YT+L+D + + T D++ REM G P+ V Y+ +
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGN-TKSIDELRREMKAEGIPPTNVTYSVI 579
Query: 138 IRAYC 142
+ C
Sbjct: 580 FKGLC 584
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M +G+ P+ + N +IQ LCR A E MK + TY LID LC Y
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVY-G 669
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
KAD + + ++ S S Y LI+A+C G
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG 704
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL---IDLLCDYDDK 111
G+ P+ S N +I GLC EA E+ +M + G PD TY L LL
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL----GM 307
Query: 112 TDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
A +V+R+M+D+G SP V+ Y L+ C G
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG 341
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M +K + PNS + ++ GLC++ EA + + + G D Y +ID
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
++A ++ + +I+ G +PSV +N LI YGYC+TQ +
Sbjct: 480 K-SGCIEEALELFKVVIETGITPSVATFNSLI-----YGYCKTQNI 519
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M E GVEP +I GL R + + + +E + G PD YT +I
Sbjct: 314 LLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYI 373
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ +KA+++ +EM ++G P+V YN +IR +C G
Sbjct: 374 S-GGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAG 411
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 15/115 (13%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I G+ + G LE K + MTEKG PN + N +I+G C + K
Sbjct: 369 ITGYISGGELE--------------KAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFK 414
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVV 132
EA + +EM+ +G P+ Y++L++ L + K +A +V+++M+++G ++
Sbjct: 415 EACALLKEMESRGCNPNFVVYSTLVNNLKN-AGKVLEAHEVVKDMVEKGHYVHLI 468
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I G + AG LE + M + G P+ +I G +
Sbjct: 334 IDGLSRAGKLEACKY--------------FMDETVKVGCTPDVVCYTVMITGYISGGELE 379
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
+AEE+F+EM KG P+ TY S+I C K +A +L+EM RG +P+ V Y+ L
Sbjct: 380 KAEEMFKEMTEKGQLPNVFTYNSMIRGFC-MAGKFKEACALLKEMESRGCNPNFVVYSTL 438
Query: 138 I 138
+
Sbjct: 439 V 439
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K +G M M G+ P+S + N +++ LC + +A + KG+ PDE TY L
Sbjct: 385 EKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVL 444
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ + + + + ++ EM+D+ P + YN+L+ C G
Sbjct: 445 VSGFTK-EGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 57 EPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKAD 116
+PN N V+ G + +A ++ M ++ PD T+ LI+ C K D A
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCR-SSKFDLAL 248
Query: 117 KVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ REM ++G P+VV +N LIR + G
Sbjct: 249 DLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+M + +KG P + +++GL + RT++A E+M G PD T+ L+ LC
Sbjct: 355 MMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLC 414
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
D TD A+++ +G+ P Y+ L+ +
Sbjct: 415 SSDHSTD-ANRLRLLASSKGYEPDETTYHVLVSGF 448
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 7/129 (5%)
Query: 23 AAGSLEPESWPNTMMIS----AKKKVAGL--MSAMTEKGVEPNSDSLNEVIQGLCREWRT 76
A P+S+ +++ K +A L ++ M E G++P+ +I GL R
Sbjct: 281 ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL 340
Query: 77 KEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNK 136
+ + +EM + G PD YT +I + DKA ++ REM +G P+V YN
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGYV-VSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Query: 137 LIRAYCCYG 145
+IR C G
Sbjct: 400 MIRGLCMAG 408
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 22/136 (16%)
Query: 18 IRGFAAAGSLE---------------PESWPNTMMISAK------KKVAGLMSAMTEKGV 56
I G + AG+LE P+ T+MI+ K + MT KG
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 57 EPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKAD 116
PN + N +I+GLC +EA + +EM+ +G P+ Y++L+ L K +A
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYL-RKAGKLSEAR 449
Query: 117 KVLREMIDRGFSPSVV 132
KV+REM+ +G +V
Sbjct: 450 KVIREMVKKGHYVHLV 465
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 27 LEPESWP-NTMMISAKKK-----VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
LEP+ + N +M S + A + S M G EP+ S N ++ R +AE
Sbjct: 352 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
VFEEMKR G AP K++ L+ D T K + +++EM + G P N ++
Sbjct: 412 AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT-KCEAIVKEMSENGVEPDTFVLNSMLNL 470
Query: 141 Y 141
Y
Sbjct: 471 Y 471
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 27 LEPESWP-NTMMISAKKK-----VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
LEP+ + N +M S + A + S M G EP+ S N ++ R +AE
Sbjct: 330 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 389
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
VFEEMKR G AP K++ L+ D T K + +++EM + G P N ++
Sbjct: 390 AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT-KCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 141 Y 141
Y
Sbjct: 449 Y 449
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L +M + G+ PN ++N ++ LC+ + EA +FEEM K PDE T+ SLID L
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D A KV +M+D + + Y LI+ + +G
Sbjct: 459 KV-GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L +M E+G ++ + N VI G C+ + +A ++ EEMK KGF P TY S+ID L
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
D+ D+A + E + +VV Y+ LI +
Sbjct: 634 KI-DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 58 PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADK 117
P++ S + +I GL + E E+F MK +G D + Y +ID C K +KA +
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC-GKVNKAYQ 608
Query: 118 VLREMIDRGFSPSVVEYNKLI 138
+L EM +GF P+VV Y +I
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVI 629
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K L+ M KG EP + VI GL + R EA +FEE K K + Y+SL
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
ID + D+A +L E++ +G +P++ +N L+ A
Sbjct: 664 IDGFGKV-GRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ + +KG+ PN + N ++ L + EA F+ MK P++ TY LI+ LC
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
K +KA +EM +G PS + Y +I
Sbjct: 739 KV-RKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 39 SAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTY 98
S +K S M E G+ PN + N +I+GL KE ++ EMK +G PD+ TY
Sbjct: 727 SHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTY 786
Query: 99 TSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+LI + + EMI G P YN LI + G
Sbjct: 787 NALISGQAKIGNMKGSM-TIYCEMIADGLVPKTSTYNVLISEFANVG 832
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
+V+ + S M GV P+ +LN +I C+ R A + ++ + + D TY ++I
Sbjct: 112 QVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVI 168
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC++ D+A + L EM+ G P V YN LI +C G
Sbjct: 169 SGLCEHG-LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 210
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+ L S M +G+ + ++ GL + +EAE+ F+ + P+ TYT+L
Sbjct: 311 RHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTAL 370
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+D LC D + A+ ++ +M+++ P+VV Y+ +I Y G
Sbjct: 371 VDGLCKAGDLSS-AEFIITQMLEKSVIPNVVTYSSMINGYVKKG 413
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G++ + N +I LC+ TK+A V +M+ +GF PD T+ SL+ K
Sbjct: 673 GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYF-VGSHVRK 731
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRA 140
A M++ G SP+V YN +IR
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRG 757
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
GVE N+ L+ ++ L R R KE + + ++M KG D+ YTSLID+ D+
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 523
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
EM +RG VV YN LI +G
Sbjct: 524 LAWA-EEMQERGMPWDVVSYNVLISGMLKFG 553
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E G P++ +I GLC+ R +A V E++K GF+ D Y LI L CD ++
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
T+K ++L +M G P + YN LI +
Sbjct: 562 -TEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKG------FAPDEK 96
++ L+ M E + P+ +L +I LC+ R EA EVFE+M+ K D
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSI 371
Query: 97 TYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
+ +LID LC + + ++R ++ +P+ V YN LI YC G +T K
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAK 426
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
+ E G + + N +I C + T++ E+ +M+++G PD TY +LI + D
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ ++++ +M + G P+V Y +I AYC G
Sbjct: 597 -FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+KV +++ M ++G +P+S + N +I + + E + E+M+ G P TY ++
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 102 IDLLCDYDDKTDKADKVLREM-IDRGFSPSVVEYNKLIRAYCCYG 145
ID C + D+A K+ ++M + +P+ V YN LI A+ G
Sbjct: 623 IDAYCSVGE-LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I G+ AG LE +AK+ V S M E ++PN ++N ++ G+CR
Sbjct: 413 IDGYCRAGKLE----------TAKEVV----SRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
A F +M+++G + TY +LI C + +KA +M++ G SP Y L
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 138 IRAYC 142
I C
Sbjct: 518 ISGLC 522
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M ++GV+ N + +I C ++A +E+M G +PD K Y +LI LC
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D A +V+ ++ + GFS ++ YN LI +C
Sbjct: 527 DHD-AIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 34 NTMMISAKK-----KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR 88
NT+M + K +V GL + M +KG++P++ + N ++ R + E + EM+
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMED 442
Query: 89 KGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQ 148
G P+ K+YT LI +D A M G PS Y LI AY G+ +
Sbjct: 443 LGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHE 502
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 40 AKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYT 99
+ K+V + M+EKGV+ + D +++ C E +EA + EM++KG + Y
Sbjct: 324 SAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYN 383
Query: 100 SLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+L+D + + ++ + + EM D+G PS YN L+ AY
Sbjct: 384 TLMDAY-NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA 425
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 41 KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTS 100
K++ + + M +KG+ N+ N ++ + +E E +F EM+ KG P TY
Sbjct: 360 KEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNI 419
Query: 101 LIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
L+D + D + +LREM D G P+V Y LI AY
Sbjct: 420 LMDAYAR-RMQPDIVETLLREMEDLGLEPNVKSYTCLISAY 459
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 22 AAAGSLEPESWPNTMMISAKKKVA------GLMSAMTEKGVEPNSDSLNEVIQGLCREWR 75
A G++ +S +MIS K+ ++ M E G P+ S + +I+GL R R
Sbjct: 246 AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGR 305
Query: 76 TKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKT--DKADKVLREMIDRGFSPSVVE 133
++ E+F+ +K KG PD Y ++I C++ D++ + R M+D P++
Sbjct: 306 INDSVEIFDNIKHKGNVPDANVYNAMI---CNFISARDFDESMRYYRRMLDEECEPNLET 362
Query: 134 YNKLI 138
Y+KL+
Sbjct: 363 YSKLV 367
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K ++ M+ VEP ++I C+ +EA+ +F+ M +G PD TYT +
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
I C ++ KA+ + +M RG P VV Y L+ Y
Sbjct: 633 IHTYCRLNE-LQKAESLFEDMKQRGIKPDVVTYTVLLDRY 671
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M E+G+ P+ + +I CR ++AE +FE+MK++G PD TYT L+D
Sbjct: 613 LFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYL 672
Query: 107 DYDDKTD------------KADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D + KA +VLRE G VV Y LI C
Sbjct: 673 KLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQC 720
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 64 NEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMI 123
N L + R +EA E+ +EMK +G PD YT+LID C D D ++ EMI
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD-LIDEMI 450
Query: 124 DRGFSPSVVEYNKLIRAYCCYGY 146
G SP ++ YN L+ G+
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGH 473
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
G + M KG++ N ++ ++Q C+ EA E F+E + D Y D L
Sbjct: 339 GFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDAL 398
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ ++A ++L+EM DRG P V+ Y LI YC G
Sbjct: 399 SKL-GRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQG 437
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 32 WPNT----MMISAKKKVA---------GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKE 78
WPN MMI K G M M+ V PN+ + N VI G C+ R
Sbjct: 250 WPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDL 309
Query: 79 AEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
AE + +M + G +E+TY +L+D +D+A ++ EM +G + V YN ++
Sbjct: 310 AERIRGDMVKSGVDCNERTYGALVDAY-GRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV 368
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+S + G +P+ N +++G C + EA V+++MK +G PD+ TY +LI L
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS 311
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ ++A L+ M+D G+ P Y L+ C G
Sbjct: 312 KA-GRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 34 NTMM-----ISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR 88
NT+M +S + G+ M E+GVEP+ + N +I GL + R +EA + M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 89 KGFAPDEKTYTSLIDLLC 106
G+ PD TYTSL++ +C
Sbjct: 329 AGYEPDTATYTSLMNGMC 346
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 35/139 (25%)
Query: 39 SAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTY 98
S+ V +++ M G+EP+ + + ++ LC R EA+++ +E+ K PD TY
Sbjct: 138 SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTY 197
Query: 99 TSLIDLLC-----------------DYDDKTDKA-----------DKVLREMI------- 123
L+ LC D+D K D K LRE +
Sbjct: 198 NFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 124 DRGFSPSVVEYNKLIRAYC 142
+ GF P YN +++ +C
Sbjct: 258 NAGFKPDCFLYNTIMKGFC 276
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 24 AGSLEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTK 77
A ++P+ + T++I + K+ L A M E GV+P++ +I C+ K
Sbjct: 754 AFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLK 813
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSP-----SVV 132
EA+ +F+ M G PD YT+LI C + KA K+++EM+++G P S V
Sbjct: 814 EAKMIFDRMIESGVKPDVVPYTALIAGCCR-NGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Query: 133 EYNKL 137
Y KL
Sbjct: 873 HYAKL 877
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 18 IRGFAAAGSLE-------------PESWPNTMMIS--AKK----KVAGLMSAMTEKGVEP 58
++GF AAG L+ P+S T+ S A+K K L+ M + GVEP
Sbjct: 539 VKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEP 598
Query: 59 NSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKV 118
++I CR ++A E FE + K PD TYT +I+ C ++ +A +
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK-QAYAL 657
Query: 119 LREMIDRGFSPSVVEYNKLIRA 140
+M R P VV Y+ L+ +
Sbjct: 658 FEDMKRRDVKPDVVTYSVLLNS 679
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 26 SLEPESWPNTMMISAKKK------VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
++P+ + + +I +K + + M +K N ++ ++Q C+ EA
Sbjct: 321 GIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEA 380
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
++F+E + + D Y D L K ++A ++ REM +G +P V+ Y LI
Sbjct: 381 YDLFKEFRETNISLDRVCYNVAFDALGKLG-KVEEAIELFREMTGKGIAPDVINYTTLIG 439
Query: 140 AYCCYGYCQ 148
C G C
Sbjct: 440 GCCLQGKCS 448
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
+M M ++P S S N ++ L R R +E+ ++ E+MKR G PD +Y ++ +L
Sbjct: 271 NIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVL 330
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ K ++++ EMI+RGF P Y LI C
Sbjct: 331 Y-LTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLC 366
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 56 VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKA 115
+ PN DS + +I + ++ +++EMK++G AP + Y SL+ +L +D D+A
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTR-EDCFDEA 348
Query: 116 DKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K+++++ + G P V YN +IR C G
Sbjct: 349 MKLMKKLNEEGLKPDSVTYNSMIRPLCEAG 378
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 35 TMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR 88
+ MIS KV L + M ++G+ P + N ++ L RE EA ++ +++
Sbjct: 298 SHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNE 357
Query: 89 KGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+G PD TY S+I LC+ K D A VL MI SP+V ++ + A
Sbjct: 358 EGLKPDSVTYNSMIRPLCE-AGKLDVARNVLATMISENLSPTVDTFHAFLEA 408
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 35 TMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPD 94
T+ + K+ L+S + E EP+ N ++ LCR + ++ A EE++ GF D
Sbjct: 298 TIGYNEKQDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQD 357
Query: 95 EKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
E T+ LI C Y+ +A L E++ +G+ P V YN ++
Sbjct: 358 EVTFGILIGWCC-YEGDIKRAVLYLSEIMSKGYKPDVYSYNAIL 400
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M +G+EP+ + N +I C+ R AEE+FE M+R+G P TY +I+ D +
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD-QE 528
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ D ++L +M +G P+VV + L+ Y
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVY 559
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 20 GFAAAGSLEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCRE 73
G A A L ++ +ISA + L + + G++P + + N +++G +
Sbjct: 293 GMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKT 352
Query: 74 WRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVE 133
K+AE + EM+++G +PDE TY+ LID + + + A VL+EM P+
Sbjct: 353 GPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVN-AGRWESARIVLKEMEAGDVQPNSFV 411
Query: 134 YNKLIRAY 141
+++L+ +
Sbjct: 412 FSRLLAGF 419
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 15/135 (11%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I GFA +G +P K L+ G+ + +L +I L RT
Sbjct: 276 IMGFAKSG--DPS------------KALQLLGMAQATGLSAKTATLVSIISALADSGRTL 321
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
EAE +FEE+++ G P + Y +L+ D A+ ++ EM RG SP Y+ L
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKD-AESMVSEMEKRGVSPDEHTYSLL 380
Query: 138 IRAYCCYGYCQTQKL 152
I AY G ++ ++
Sbjct: 381 IDAYVNAGRWESARI 395
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 27 LEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L+P S +I+A ++ MT G++P+ +LN +I + R EA
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSP 129
V + MK G PD TYT+L+ L DK K V EMI G P
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKALIRV-DKFQKVPVVYEEMIMSGCKP 687
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 27 LEPESWPNTMMISAKKKVAG-------LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEA 79
L P+ W ++S K+ L + G+ P D+ N ++ LC+ T A
Sbjct: 114 LSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNA 173
Query: 80 EEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
E+F+ +K + P+ TY LI+ LC + D ++RE+ G++P+ V Y +++
Sbjct: 174 IELFKHLKSR-VKPELMTYNILINGLCK-SRRVGSVDWMMRELKKSGYTPNAVTYTTMLK 231
Query: 140 AY 141
Y
Sbjct: 232 MY 233
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYD- 109
M E G+EP+ + N +I G + ++F+EM G +PD +Y +L+ C +
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMS--CYFKL 131
Query: 110 DKTDKADKVLREMID-RGFSPSVVEYNKLIRAYCCYGY 146
+ +A K+L E I G P + YN L+ A C G+
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGH 169
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L + G P+ + + +I+ LC+ RT EA+ +F EM KG P TY S+ID C
Sbjct: 601 LFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC 660
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ + D+ + M + +P V+ Y LI C G
Sbjct: 661 K-EGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASG 698
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 67 IQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRG 126
I GL + E+F ++ G PD Y LI LC +T +AD + EM+ +G
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCK-ACRTMEADILFNEMVSKG 644
Query: 127 FSPSVVEYNKLIRAYC 142
P+V YN +I +C
Sbjct: 645 LKPTVATYNSMIDGWC 660
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL- 105
L+ + + G+ P N +I+G+C+E R++E+ ++ EMK G P + T + L
Sbjct: 461 LLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLA 520
Query: 106 --CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
CD+ D +L++M GF P + L++ C
Sbjct: 521 ERCDFVGALD----LLKKMRFYGFEPWIKHTTFLVKKLC 555
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M+++G+ N+ + +IQGL + A+E+F+EM G PD TY L+D LC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 107 DYDDKTDKADKVLR------------EMIDRGFSPSVVEYNKLIRAYCCYGY 146
K K +K L + +G P+VV Y +I +C G+
Sbjct: 63 ----KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGF 110
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
++V ++ M E G PN + V+ L + + EA V+E+MK G PD K Y+SL
Sbjct: 325 RRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSL 384
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
I +L D A+ + +M ++G V+ YN +I A
Sbjct: 385 IHILSKTGRFKDAAE-IFEDMTNQGVRRDVLVYNTMISA 422
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 56 VEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKA 115
++P++ + N +I G C+ + +A + + MK F PD TYTS ++ C D +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD-FRRV 327
Query: 116 DKVLREMIDRGFSPSVVEYNKLIRA 140
+++L EM + G +P+VV Y ++ +
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVMHS 352
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E+G EPN + N +I+ LC + R ++A + +EM ++G PD TY L L +
Sbjct: 285 MRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL----E 340
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQ 148
K + + MI G P + Y L+R + +G+ Q
Sbjct: 341 KPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQ 378
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E G++P D L++++ LC + A+E F + K G P KTY+ L+ D
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ A KV EM++R ++ YN L+ A C G
Sbjct: 224 ASG-ARKVFDEMLERNCVVDLLAYNALLDALCKSG 257
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M G++P++ S I C A +V + MKR P+ T+ +I LC
Sbjct: 265 MFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLC 324
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
++K D A +L EMI +G +P YN ++ +C +C+ +
Sbjct: 325 K-NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHC--DHCEVNR 366
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 27 LEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L+P+++ + I A + SA M + PN + N +I+ LC+ + +A
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
+ +EM +KG PD TY S++ CD+ + ++A K+L M P YN +++
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCE-VNRATKLLSRMDRTKCLPDRHTYNMVLK 391
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G+ P++ + + +++G R A +VF+EM + D Y +L+D LC D D
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD-VDG 261
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
K+ +EM + G P + I AYC G
Sbjct: 262 GYKMFQEMGNLGLKPDAYSFAIFIHAYCDAG 292
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 44 VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLID 103
V +++ M +GV PN ++N + C+ EA E++ GFAP +Y LI
Sbjct: 376 VYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIH 435
Query: 104 LLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
LC ++ ++A VL+ IDRG ++ L A C G
Sbjct: 436 TLCA-NESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKG 476
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E G P++ +I GLC+ R +A V E++K GF+ D Y LI L CD ++
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+K ++L +M G P + YN LI +
Sbjct: 562 -AEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKG------FAPDEK 96
++ L+ M E + P+ +L +I LC+ R EA EVFE+M+ K D
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 97 TYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
+ +LID LC + + ++R ++ P+ V YN LI YC G +T K
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAK 426
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+KV +++ M ++G +P+S + N +I + + E + E+M+ G P TY ++
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 102 IDLLCDYDDKTDKADKVLREM-IDRGFSPSVVEYNKLIRAYCCYG 145
ID C + D+A K+ ++M + +P+ V YN LI A+ G
Sbjct: 623 IDAYCSVGE-LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I G+ AG LE +AK+ V S M E ++PN ++N ++ G+CR
Sbjct: 413 IDGYCRAGKLE----------TAKEVV----SRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
A F +M+++G + TY +LI C + +KA +M++ G SP Y L
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 138 IRAYC 142
I C
Sbjct: 518 ISGLC 522
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
+ E G + + N +I C + ++ E+ +M+++G PD TY +LI + D
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ ++++ +M + G P+V Y +I AYC G
Sbjct: 597 -FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M ++GV+ N + +I C ++A +E+M G +PD K Y +LI LC
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D A +V+ ++ + GFS ++ YN LI +C
Sbjct: 527 DHD-AIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
L+ M KG++P+ + ++ G C + KEA+E +EM R+GF P + LI+ L
Sbjct: 203 ALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGL 262
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ + A +++ +M GF P + +N LI A
Sbjct: 263 LN-AGYLESAKEMVSKMTKGGFVPDIQTFNILIEA 296
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G + D N ++ LC A + M RKG PD++TY L++ C K +
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCS-AGKMKE 235
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
A + L EM RGF+P + LI GY ++ K
Sbjct: 236 AQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAK 272
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 25 GSLEPESWP-NTMMISAKKK-----VAGLMSAMTEK-GVEPNSDSLNEVIQGLCREWRTK 77
G ++P + N+MM+S ++ V + M E+ G PN S N +++ C
Sbjct: 239 GKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMS 298
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
EAE+V+EEMK +G D Y ++I LC + + KA ++ R+M +G + + Y L
Sbjct: 299 EAEKVWEEMKVRGVVYDIVAYNTMIGGLCS-NFEVVKAKELFRDMGLKGIECTCLTYEHL 357
Query: 138 IRAYCCYG 145
+ YC G
Sbjct: 358 VNGYCKAG 365
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCRE---WRTKEAEEVFEEMKRKG-FAPDEKTYTSLIDLLC 106
M KG E + ++ +++GLC + R EA ++ ++ R+ F P Y L+ LC
Sbjct: 377 MKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLC 436
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQKL 152
+ D K D+A + EM+ +GF PS Y I Y G +T L
Sbjct: 437 E-DGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSAL 481
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
++ AM E G+ P + +I L ++ R EAEE F +M G PDE Y +I+
Sbjct: 568 AIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTY 627
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ + D+A++++ E++ PS Y LI + G
Sbjct: 628 AR-NGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M E G P++ +I GLC+ R +A V E++K GF+ D Y LI L CD ++
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+K ++L +M G P + YN LI +
Sbjct: 562 -AEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKG------FAPDEK 96
++ L+ M E + P+ +L +I LC+ R EA EVFE+M+ K D
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 97 TYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
+ +LID LC + + ++R ++ P+ V YN LI YC G +T K
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAK 426
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+KV +++ M ++G +P+S + N +I + + E + E+M+ G P TY ++
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 102 IDLLCDYDDKTDKADKVLREM-IDRGFSPSVVEYNKLIRAYCCYG 145
ID C + D+A K+ ++M + +P+ V YN LI A+ G
Sbjct: 623 IDAYCSVGE-LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I G+ AG LE +AK+ V S M E ++PN ++N ++ G+CR
Sbjct: 413 IDGYCRAGKLE----------TAKEVV----SRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
A F +M+++G + TY +LI C + +KA +M++ G SP Y L
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN-VEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 138 IRAYC 142
I C
Sbjct: 518 ISGLC 522
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
+ E G + + N +I C + ++ E+ +M+++G PD TY +LI + D
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ ++++ +M + G P+V Y +I AYC G
Sbjct: 597 -FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M ++GV+ N + +I C ++A +E+M G +PD K Y +LI LC
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D A +V+ ++ + GFS ++ YN LI +C
Sbjct: 527 DHD-AIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 50 AMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYD 109
M +G+ P+ + NE+++ + + A E+ + KGF PDE TY+ LI + +
Sbjct: 399 VMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGN 458
Query: 110 DKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
D D+A K+ EM R SP + LI C G
Sbjct: 459 D-IDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCG 493
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M +GV+P + + N + + +T+E ++ ++ G +PD TY ++ +LC
Sbjct: 377 ILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLC 436
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ D K A +V +EM +RG P ++ LI C
Sbjct: 437 E-DGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLC 471
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M E G + +S N ++ G R + A E+FE +K G PD TY +L+
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ ++A +++REM D+GF + Y+ ++ A
Sbjct: 596 -HAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 34 NTMMISAK-KKVAGLMSAMTEKGV---EPNSDSLNEVIQGLCR-EWRTKEAEEVFEEMKR 88
N M I K +V L + +E G+ P S N VI+ L + E F++MK
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 89 KGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+P E TY+ LID C ++ +KA +L EM ++GF P Y LI A
Sbjct: 403 DSVSPSEFTYSILIDGYCK-TNRVEKALLLLEEMDEKGFPPCPAAYCSLINA 453
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 50 AMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYD 109
AM G EP++ + ++++ GLC+ R +EA V ++M+ +G PD KT+T LI C +
Sbjct: 395 AMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCK-N 453
Query: 110 DKTDKADKVLREMIDRGF 127
++ DKA M+++GF
Sbjct: 454 NELDKALACFANMLEKGF 471
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M +G++P+ + +I G + EA+E+ E K+K TY +LI C
Sbjct: 429 VLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYC 488
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
++ D+A K+L EM G P+ EYNKLI+++C
Sbjct: 489 KIEE-YDEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 40 AKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYT 99
A++ + L +G++P SD VI LCR K+A+ + +M KG AP +
Sbjct: 356 AQEMLGDLSGEARRRGIKPFSD----VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVF- 410
Query: 100 SLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+L+ C D+A +VL+ M RG P V Y +I Y G
Sbjct: 411 NLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGG 456
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K L+ M KG P + N V+ + EA+EV + M+ +G PD TYT +
Sbjct: 389 KDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVI 448
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
I D+A ++L E + S V Y+ LIR YC
Sbjct: 449 ISGYAK-GGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYC 488
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K+ G++ M KG++ + + + V+ RE +EA+E F E+K G+ P TY +L
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQ 148
+ + T+ A VL+EM + V YN+L+ AY G+ +
Sbjct: 323 LQVFGKAGVYTE-ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK 368
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K+ AG++ MT+KGV PN+ + VI + + EA ++F MK G P+ TY ++
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ LL ++++ K+L +M G SP+ +N ++ A C
Sbjct: 428 LSLLGK-KSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALC 466
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 20 GFA--AAGSLE--------PESWPNTMMISAKKKVAG------LMSAMTEKGVEPNSDSL 63
GF+ AAG +E P + T +I A K L +M E G PN+ +
Sbjct: 365 GFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTY 424
Query: 64 NEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMI 123
N V+ L ++ R+ E ++ +MK G +P+ T+ +++ LC ++V REM
Sbjct: 425 NAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA-LCGNKGMDKFVNRVFREMK 483
Query: 124 DRGFSPSVVEYNKLIRAYCCYGYCQTQ 150
GF P +N LI A YG C ++
Sbjct: 484 SCGFEPDRDTFNTLISA---YGRCGSE 507
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
G++ ++ E G+ P+ + N ++ R +AEE+ + +++ PD +Y ++I
Sbjct: 652 GILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF 711
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
C +A ++L EM +RG P + YN + Y G
Sbjct: 712 CR-RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 42 KKVAGLMSAMT---EKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTY 98
+ +AG A T + G +P+ N ++ R +AE + E ++ G +PD TY
Sbjct: 610 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 99 TSLIDLLCDYDDKTD--KADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQ 148
SL+D+ Y + + KA+++L+ + P +V YN +I+ +C G Q
Sbjct: 670 NSLMDM---YVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M G PN + N ++ + K VF EMK GF PD T+ +LI
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ D A K+ EM GF+ V YN L+ A
Sbjct: 503 RCGSEVD-ASKMYGEMTRAGFNACVTTYNALLNA 535
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 33 PNTMMISAKKKVAG----------LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P T+ +A +V G ++ M E +S + NE++ R +KEA V
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
E M +KG P+ TYT++ID K D+A K+ M + G P+ YN ++
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGK-AGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 31 SWPNTMMISAKKK-----VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEE 85
+W NTM+ K V + M G EP+ D+ N +I R +A +++ E
Sbjct: 458 TW-NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE 516
Query: 86 MKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
M R GF TY +L++ L D + V+ +M +GF P+ Y+ +++ Y
Sbjct: 517 MTRAGFNACVTTYNALLNALARKGD-WRSGENVISDMKSKGFKPTETSYSLMLQCY 571
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M KG++P+ + N +I C++ ++A ++ ++M+ + PD TYT++I L
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGL-GLIG 295
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ DKA +VL+EM + G P V YN IR +C
Sbjct: 296 QPDKAREVLKEMKEYGCYPDVAAYNAAIRNFC 327
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K L+ M E+ P+ + VI GL + +A EV +EMK G PD Y +
Sbjct: 263 EKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAA 322
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
I C + ADK++ EM+ +G SP+ YN R
Sbjct: 323 IRNFC-IARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 21 FAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
F+A G L+ S + L M + G P+ + N +I R EA
Sbjct: 449 FSALGKLKQIS-----------HIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAI 497
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+FEE++R PD +Y SLI+ L D D+A +EM ++G +P VV Y+ L+
Sbjct: 498 NIFEELERSDCKPDIISYNSLINCLGKNGD-VDEAHVRFKEMQEKGLNPDVVTYSTLME- 555
Query: 141 YCCYG 145
C+G
Sbjct: 556 --CFG 558
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 57 EPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKAD 116
+P+ S N +I L + EA F+EM+ KG PD TY++L++ ++ + A
Sbjct: 509 KPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGK-TERVEMAY 567
Query: 117 KVLREMIDRGFSPSVVEYNKLI 138
+ EM+ +G P++V YN L+
Sbjct: 568 SLFEEMLVKGCQPNIVTYNILL 589
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M E G+ PN+ ++ + GLC++ +EA ++F M+ KG P+ YT++++ C
Sbjct: 121 IFKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA-YCC 143
K + A ++ R+M + G +P+ Y L++ Y C
Sbjct: 178 KA-HKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNC 214
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M +KG P V++ C+ + ++A+ +F +M+ G AP+ +Y L+ L
Sbjct: 153 LFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLY 212
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ + D A EM++ G SP+V + +L+ A C
Sbjct: 213 NC-NMLDDAVAFCSEMLESGHSPNVPTFVELVDALC 247
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ M E G+ PN+ ++ + GLC++ +EA ++F M+ KG P+ YT++++ C
Sbjct: 121 IFKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA-YCC 143
K + A ++ R+M + G +P+ Y L++ Y C
Sbjct: 178 KA-HKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNC 214
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M +KG P V++ C+ + ++A+ +F +M+ G AP+ +Y L+ L
Sbjct: 153 LFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLY 212
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ + D A EM++ G SP+V + +L+ A C
Sbjct: 213 NC-NMLDDAVAFCSEMLESGHSPNVPTFVELVDALC 247
>AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9151816-9154407 FORWARD
LENGTH=630
Length = 630
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL-LCDYDDKTD 113
G+ PN DS N ++ + +T EA VFE + G PD +TY+ L+D L + D K+
Sbjct: 500 GLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDSRTYSLLVDAHLINRDPKS- 558
Query: 114 KADKVLREMIDRGFSPSVVEYNKLIR 139
A V+ +MI GF PS KL R
Sbjct: 559 -ALTVVDDMIKAGFEPSRETLKKLRR 583
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 28 EPESWPNTMMISAKKKVAGLM-------SAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
P+ T ++SA AGLM + M GV N + N +++G C++ + AE
Sbjct: 449 HPDEVTYTTVVSAFVN-AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAE 507
Query: 81 EVFEEMKR-KGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIR 139
++ EM G PD +Y +ID C D + A EM RG +P+ + Y L++
Sbjct: 508 DLLREMTEDAGIEPDVVSYNIIID-GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMK 566
Query: 140 AYCCYG 145
A+ G
Sbjct: 567 AFAMSG 572
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ + +G P+ S N V+ +C+ + K AE++ M R G PD +Y SLID C
Sbjct: 43 FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC 102
Query: 107 DYDDKTDKADKVLREM-IDRGF--SPSVVEYNKLIRAY 141
D A VL + GF P +V +N L +
Sbjct: 103 RNGD-IRSASLVLESLRASHGFICKPDIVSFNSLFNGF 139
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 27 LEPESWPNTMMISA------KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
+EP S T +I ++ M +G+ + + +I GLC + KEA
Sbjct: 264 VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEAT 323
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
E+ E+M++ PD +T++++ + A + ++I+RGF P VV + +I
Sbjct: 324 EIVEDMEKSDLVPDMVIFTTMMNAYFK-SGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 34 NTMMISAKK--KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGF 91
NT++ + K KV S M+E EPN + N +I C E + ++ + E+ GF
Sbjct: 221 NTLLHALCKNGKVGRARSLMSEMK-EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGF 279
Query: 92 APDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
PD T T ++++LC+ + + +A +VL + +G VV N L++ YC G
Sbjct: 280 VPDVVTVTKVMEVLCN-EGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALG 332
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 28 EPESWPNTMMISAKKKVAGLMSAMT--EK----GVEPNSDSLNEVIQGLCREWRTKEAEE 81
EP ++ISA L+ +M EK G P+ ++ +V++ LC E R EA E
Sbjct: 245 EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALE 304
Query: 82 VFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
V E ++ KG D +L+ C K A + EM +G+ P+V YN LI Y
Sbjct: 305 VLERVESKGGKVDVVACNTLVKGYCALG-KMRVAQRFFIEMERKGYLPNVETYNLLIAGY 363
Query: 142 CCYG 145
C G
Sbjct: 364 CDVG 367
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L++ M +G P S + N VI G C++ + + E+M +G PD ++Y L++ LC
Sbjct: 515 LINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELC 574
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGYCQTQK 151
D KA + M+++ P ++ L+ +C +QK
Sbjct: 575 VKGD-IQKAWLLFSRMVEKSIVPDPSMWSSLM-------FCLSQK 611
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M GV PN+ N ++ LC+ + A + EMK P++ T+ LI C
Sbjct: 204 LLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYC 259
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ + K ++ +L + GF P VV K++ C G
Sbjct: 260 N-EQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEG 297
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M K + PN S N ++GL R + +A + + MK +G +PD TY +LI D+
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY-RVDN 312
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
++ K EM ++G +P V Y LI C G
Sbjct: 313 NLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKG 347
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + G++P++ +I G + + E+ +EM+ KG PD KTY +LI L+ +
Sbjct: 394 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN-QK 452
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ A ++ +MI PS+ +N ++++Y
Sbjct: 453 MPEHATRIYNKMIQNEIEPSIHTFNMIMKSY 483
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ + M + +EP+ + N +++ + V+EEM +KG PD+ +YT LI L
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLI 519
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
+ K+ +A + L EM+D+G +++YNK
Sbjct: 520 G-EGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 29 PESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P T++++ +V L+ A M ++G++P+ + N +++GL R + +A ++
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
F MK KG P+ ++YT +I C + A + +M+D G P Y LI +
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCK-QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 41 KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTS 100
+KK G+ M + + +++N ++ L R KEA+ +F+++K + F P+ TYT
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 303
Query: 101 LIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
L++ C + + A ++ +MID+G P +V +N ++
Sbjct: 304 LLNGWCRVRNLIEAA-RIWNDMIDQGLKPDIVAHNVML 340
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 29 PESWPNTMMISAKKK------VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P+++ M+I A K + M G EPN+ + + +++G+C + R +
Sbjct: 221 PDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGF 280
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
++EM+ KG P+ Y LI L + + D+A +V+ +M+ SP ++ YN ++ C
Sbjct: 281 YKEMQVKGMVPNGSCYMVLICSL-SMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELC 339
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+KV L S M+ +GV PN D+ ++ GLC+ + EA E++ F DE+ Y++L
Sbjct: 333 EKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTL 392
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSP 129
+ C DK+ +V+ EMI GF P
Sbjct: 393 SE-ECYRVGMIDKSLEVVAEMIRDGFIP 419
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A ++ M KG++P S N +I GLC++ A ++ EE F P E TY L++
Sbjct: 327 ARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMES 386
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
LC D T KA VL M+ + + YN +R C
Sbjct: 387 LCKELD-TGKARNVLELMLRKEGADRTRIYNIYLRGLC 423
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGF-APDEKTYTSL 101
++ ++ +M + P+ +LN VI GLC+ R +A +V ++M F APD T ++
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+ L + D + R M + P VV YN +IR
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRG 528
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 46 GLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLL 105
GL + M +G++P+ + N ++ EAE VF M G PD TY+ L++
Sbjct: 233 GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF 292
Query: 106 CDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ +K +L EM G P + YN L+ AY G
Sbjct: 293 GKL-RRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSG 331
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+KV L+ M G P+ S N +++ + KEA VF +M+ G P+ TY+ L
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
++L + D ++ EM P YN LI + GY
Sbjct: 359 LNLFGQ-SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M+ + + NS N +I G R EA ++ ++MK++G PD TYTS I C
Sbjct: 720 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS-ACSKAG 778
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
++A + + EM G P++ Y LI+ +
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 34 NTMMISAKKK-----VAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR 88
N M+ S +KK V L M E+GV PN + V+ ++ +EA + F EMK
Sbjct: 262 NFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKS 321
Query: 89 KGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPS 130
GF P+E TY+S+I L D +KA + +M +G PS
Sbjct: 322 LGFVPEEVTYSSVISLSVKAGD-WEKAIGLYEDMRSQGIVPS 362
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+KV M + EP+ + +I G + +EA F M+ +G +PD KTY+
Sbjct: 906 EKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKF 965
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEY 134
I+ LC K++ A K+L EM+D+G +PS + +
Sbjct: 966 INCLCQ-ACKSEDALKLLSEMLDKGIAPSTINF 997
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+K L + M E G+EP+S ++ V+ G + R EA +VF M+ KG P K+Y+
Sbjct: 450 EKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIF 509
Query: 102 IDLLCDYDDKTDKADKVLREM 122
+ LC + D+ K+ +M
Sbjct: 510 VKELCR-SSRYDEIIKIFNQM 529
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 18 IRGFAAAGSLEPESWPNTMMISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTK 77
I G A AG LE +T M ++GV PN + N ++ G+C+
Sbjct: 592 IYGHAKAGRLEQAFQYST--------------EMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
EA +M+ +G P++ +YT LI CD+ +K ++ K+ +EM+D+ P + L
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDF-EKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Query: 138 IR 139
+
Sbjct: 697 FK 698
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M G S N +I+G C++ +A V +EM G P TY I LCD+
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF-G 357
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D A RE++ +P VV YN L+ Y G
Sbjct: 358 RIDDA----RELLSSMAAPDVVSYNTLMHGYIKMG 388
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 34 NTMMISAKK-----KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKR 88
NTM+ S K +V + M + +E + + N +I G + + +EA +M+R
Sbjct: 242 NTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRR 301
Query: 89 KGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
GFA ++ LI+ C D A V EM++ G P+ YN I A C +G
Sbjct: 302 SGFAVTPYSFNPLIEGYCK-QGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 29 PESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P T++++ +V L+ A M + G++P+ + N +++GL R + +A ++
Sbjct: 295 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 354
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
F MK KG P+ ++YT +I C + A + +M+D G P Y LI +
Sbjct: 355 FHVMKSKGPCPNVRSYTIMIRDFCK-QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 412
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + G++P++ +I G + + E+ +EM+ KG PD KTY +LI L+ +
Sbjct: 393 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN-QK 451
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ ++ +MI PS+ +N ++++Y
Sbjct: 452 MPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 482
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ + M + +EP+ + N +++ + V++EM +KG PD+ +YT LI L
Sbjct: 459 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 518
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
+ K+ +A + L EM+D+G +++YNK
Sbjct: 519 S-EGKSREACRYLEEMLDKGMKTPLIDYNKF 548
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 41 KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTS 100
+KK G+ M + + +++N ++ L R KEA+ +F+++K + F P+ TYT
Sbjct: 244 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 302
Query: 101 LIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
L++ C + + A ++ +MID G P +V +N ++
Sbjct: 303 LLNGWCRVRNLIEAA-RIWNDMIDHGLKPDIVAHNVML 339
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 29 PESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P T++++ +V L+ A M + G++P+ + N +++GL R + +A ++
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 355
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
F MK KG P+ ++YT +I C + A + +M+D G P Y LI +
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCK-QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + G++P++ +I G + + E+ +EM+ KG PD KTY +LI L+ +
Sbjct: 394 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN-QK 452
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ ++ +MI PS+ +N ++++Y
Sbjct: 453 MPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 483
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
+ + M + +EP+ + N +++ + V++EM +KG PD+ +YT LI L
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 519
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKL 137
+ K+ +A + L EM+D+G +++YNK
Sbjct: 520 S-EGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 41 KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTS 100
+KK G+ M + + +++N ++ L R KEA+ +F+++K + F P+ TYT
Sbjct: 245 RKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTV 303
Query: 101 LIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
L++ C + + A ++ +MID G P +V +N ++
Sbjct: 304 LLNGWCRVRNLIEAA-RIWNDMIDHGLKPDIVAHNVML 340
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
K+V +++ M VEP+ V+QG+ + +A+++F+E+ G APD TY
Sbjct: 268 KEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVY 327
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
I+ LC +D + A K++ M G P+VV YN LI+A
Sbjct: 328 INGLCKQND-IEGALKMMSSMNKLGSEPNVVTYNILIKA 365
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 38 ISAKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKT 97
I K ++ M G P++ + N +I LC++ + A + E+M G PD T
Sbjct: 152 IDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVIT 211
Query: 98 YTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCY 144
Y ++I + DY + ++A + ++ + G P ++ Y L+ C Y
Sbjct: 212 YNTVIRCMFDYGN-AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRY 257
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ M +G P+ + N ++ CR +E V + + G + TY +L+ LC
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ + D+ +++L M + P+V+ YN LI C
Sbjct: 326 SH-EYWDEVEEILNIMYQTSYCPTVITYNILINGLC 360
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 53 EKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKT 112
+ G P + +++ +CR + A EV E+M +G PD TY SL++ C +
Sbjct: 237 QNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLE 296
Query: 113 DKADKVLREMIDRGFSPSVVEYNKLIRAYCCYGY 146
+ A V++ ++ G + V YN L+ + C + Y
Sbjct: 297 EVA-SVIQHILSHGLELNTVTYNTLLHSLCSHEY 329
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 45 AGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDL 104
A L S M + GV ++ + N +I EAE + ++M+ KG +PD KTY L+ L
Sbjct: 325 ANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSL 384
Query: 105 LCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
D D + A + R++ G P V + ++ C
Sbjct: 385 HADAGD-IEAALEYYRKIRKVGLFPDTVTHRAVLHILC 421
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 64 NEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMI 123
N +I+ + ++A +F+ MK +G PDE TY SL +L D D+A ++L EM+
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGV-DLVDEAQRILAEML 577
Query: 124 DRGFSPSVVEYNKLIRAYCCYG 145
D G P Y +I +Y G
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLG 599
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + GV P + N ++ ++A+ VF+ M+R PD +YT+++ + D
Sbjct: 347 MLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASD 406
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ A+K + + GF P++V Y LI+ Y
Sbjct: 407 -MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 437
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 27 LEPESWPNTMMISAKKKVAG------LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L+P+ MMI KK + S+M KGV ++ + N + + E KE
Sbjct: 250 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVS 306
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+++++M+R PD +Y LI + ++A V EM+D G P+ YN L+ A
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGR-ARREEEALSVFEEMLDAGVRPTHKAYNILLDA 365
Query: 141 YCCYGYCQTQK 151
+ G + K
Sbjct: 366 FAISGMVEQAK 376
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
++ L+ M G +PN+ + N +I R KEA VF +M+ G PD TY +LI
Sbjct: 377 EINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI 436
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
D+ D A + + M + G SP Y+ +I
Sbjct: 437 DIHAK-AGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L M G +P+ + + V++ L +EAE VF EM+RK + PDE Y L+DL
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+ DKA + + M+ G P+V N L+ +
Sbjct: 581 KAGN-VDKAWQWYQAMLQAGLRPNVPTCNSLLSTF 614
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
M + GV P + N ++ ++A+ VF+ M+R PD +YT+++ + D
Sbjct: 340 MLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASD 399
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ A+K + + GF P++V Y LI+ Y
Sbjct: 400 -MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 430
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 27 LEPESWPNTMMISAKKKVAG------LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAE 80
L+P+ MMI KK + S+M KGV ++ + N + + E KE
Sbjct: 243 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVS 299
Query: 81 EVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
+++++M+R PD +Y LI + ++A V EM+D G P+ YN L+ A
Sbjct: 300 KIYDQMQRSDIQPDVVSYALLIKAYGR-ARREEEALSVFEEMLDAGVRPTHKAYNILLDA 358
Query: 141 YCCYGYCQTQK 151
+ G + K
Sbjct: 359 FAISGMVEQAK 369
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
+ VA +++ M G P++ + N ++ LC + EA +V EEM G PD ++Y ++
Sbjct: 153 QSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAV 212
Query: 102 IDLLCDYDDKTDKADKVLREMIDR-GFSP 129
I+ LC KT K+++EM+ + G SP
Sbjct: 213 INSLC-LARKTTDVVKIVKEMVSKAGISP 240
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G EP++ + +IQG C+ +R +A ++ EM+ GF PD Y L+D K +
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKA-RKVTE 377
Query: 115 ADKVLREMIDRGFSPSVVEYNKLI 138
A ++ +M+ G S YN LI
Sbjct: 378 ACQLFEKMVQEGVRASCWTYNILI 401
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 58 PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADK 117
P+ + N +I LC + K+A V++E+K G PD TY LI C + D A +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCK-SYRMDDAMR 345
Query: 118 VLREMIDRGFSPSVVEYNKLI 138
+ EM GF P + YN L+
Sbjct: 346 IYGEMQYNGFVPDTIVYNCLL 366
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 29 PESWPNTMMISAKK------KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P+ + +++SA K K M V P++ + N +I L + ++ +A ++
Sbjct: 114 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 173
Query: 83 FEEM--KRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
F M KR PD T+TS++ L + + V M+ G P++V YN L+ A
Sbjct: 174 FNSMREKRAECRPDVVTFTSIMHLY-SVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 232
Query: 141 YCCYGYCQT 149
Y +G T
Sbjct: 233 YAVHGMSGT 241
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 52/137 (37%), Gaps = 34/137 (24%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
KV L+ M G+ P+ + N +I + EA E+ E+ R+GF P +T +I
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 103 --------------------DLLCDYD--------------DKTDKADKVLREMIDRGFS 128
DL D + +KA + +++D G
Sbjct: 556 GGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 129 PSVVEYNKLIRAYCCYG 145
P VV YN LI YC G
Sbjct: 616 PDVVLYNTLIHGYCSVG 632
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 29 PESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P +T++I A + + A M +G++ + + N ++ G + + + E+
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+EM+ G +PD TY LI + D+A++++ E+I RGF PS + + +I +
Sbjct: 501 IDEMRSAGISPDVATYNILIHSMV-VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 52/137 (37%), Gaps = 34/137 (24%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
KV L+ M G+ P+ + N +I + EA E+ E+ R+GF P +T +I
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 103 --------------------DLLCDYD--------------DKTDKADKVLREMIDRGFS 128
DL D + +KA + +++D G
Sbjct: 556 GGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 129 PSVVEYNKLIRAYCCYG 145
P VV YN LI YC G
Sbjct: 616 PDVVLYNTLIHGYCSVG 632
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 29 PESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P +T++I A + + A M +G++ + + N ++ G + + + E+
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Query: 83 FEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
+EM+ G +PD TY LI + D+A++++ E+I RGF PS + + +I +
Sbjct: 501 IDEMRSAGISPDVATYNILIHSMV-VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 29 PESWPNTMMISAKK------KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEV 82
P+ + +++SA K K M V P++ + N +I L + ++ +A ++
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 305
Query: 83 FEEM--KRKGFAPDEKTYTSLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRA 140
F M KR PD T+TS++ L + + V M+ G P++V YN L+ A
Sbjct: 306 FNSMREKRAECRPDVVTFTSIMHLY-SVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 364
Query: 141 YCCYGYCQT 149
Y +G T
Sbjct: 365 YAVHGMSGT 373
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 58 PNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADK 117
P++ S N ++ LC EAE+++ EM+ K PDE TY L+D C + K D+
Sbjct: 383 PDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD-TCFKEGKIDEGAA 441
Query: 118 VLREMIDRGFSPSVVEYNKL 137
+ M++ P++ YN+L
Sbjct: 442 YYKTMVESNLRPNLAVYNRL 461
>AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:513607-515604 FORWARD
LENGTH=665
Length = 665
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
++ AM E G P+ D + + GL R+ + EA E+ M+ G D+K SL++ C
Sbjct: 412 VLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHC 471
Query: 107 DYDDKTDKADKVLREMIDR-GFSPSVVEYNKLIRAYC 142
D D ++A + ++MI + G S + + KL+ AYC
Sbjct: 472 DAKD-LEEASECFKKMIGKEGVSYAGYAFEKLVLAYC 507
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K + MT KG PN + N +I+GLC +EA + +EM+ +G P+ Y++L+
Sbjct: 742 KAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 801
Query: 103 DLLCDYDDKTDKADKVLREMIDRG 126
L K +A KV++EM+ +G
Sbjct: 802 GYL-RKAGKLSEARKVIKEMVKKG 824
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 42 KKVAGL--MSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYT 99
K +A L ++ M E G++P+ +I G +A+E+F EM KG P+ TY
Sbjct: 704 KPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYN 763
Query: 100 SLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLI 138
S+I LC + +A +L+EM RG +P+ V Y+ L+
Sbjct: 764 SMIRGLC-MAGEFREACWLLKEMESRGCNPNFVVYSTLV 801
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 51 MTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDD 110
++ KG S + +I LC+ R +E+ +EMK++G APD Y +LI+ C +
Sbjct: 388 LSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK-AE 446
Query: 111 KTDKADKVLREMIDRGFSPSVVEYNKLIR 139
A K+ EM G ++ YN LIR
Sbjct: 447 MIRPAKKLWDEMFVEGCKMNLTTYNVLIR 475
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 41 KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEM-KRKGFAPDEKTYT 99
K+ V+ + M + P N +I+GLC + ++ EA ++M K+ +E+TY
Sbjct: 350 KEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQ 409
Query: 100 SLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+L+D LC D + +A +V+ EM+ + P V Y+ +I+ C
Sbjct: 410 TLVDGLCR-DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
++V L++ +G P DS + + L E + E EEV M+ KGF P Y +
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAK 339
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ LC + + +EM+ P+V YN LI+ C
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLC 380
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 59 NSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKV 118
N ++ ++ GLCR+ + EA +V EEM K P +TY +I LCD D + + A
Sbjct: 404 NEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE-AVMW 462
Query: 119 LREMIDRGFSPSVVEYNKLIRAYC 142
L EM+ + P + L + C
Sbjct: 463 LEEMVSQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 41 KKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEM-KRKGFAPDEKTYT 99
K+ V+ + M + P N +I+GLC + ++ EA ++M K+ +E+TY
Sbjct: 350 KEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQ 409
Query: 100 SLIDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+L+D LC D + +A +V+ EM+ + P V Y+ +I+ C
Sbjct: 410 TLVDGLCR-DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%)
Query: 42 KKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSL 101
++V L++ +G P DS + + L E + E EEV M+ KGF P Y +
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAK 339
Query: 102 IDLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYC 142
+ LC + + +EM+ P+V YN LI+ C
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLC 380
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 59 NSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDKADKV 118
N ++ ++ GLCR+ + EA +V EEM K P +TY +I LCD D + + A
Sbjct: 404 NEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYE-AVMW 462
Query: 119 LREMIDRGFSPSVVEYNKLIRAYC 142
L EM+ + P + L + C
Sbjct: 463 LEEMVSQDMVPESSVWKALAESVC 486
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 53 EKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEE-MKRKGFAPDEKTYTSLIDLLCDYDDK 111
+ + PN S N++I C E EA EV+ + FAP TY L L
Sbjct: 209 QSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRI 268
Query: 112 TDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
D A +LREM+ +G + YN LIR Y
Sbjct: 269 GDAA-SLLREMLSKGQAADSTVYNNLIRGY 297
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M KG+EP+ + N VI G R + A E F MK + P+E TY LI+ L
Sbjct: 550 LLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
+ D K A ++ + + G S Y+ ++++ YG
Sbjct: 610 N-DAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYG 647
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 40 AKKKVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYT 99
AK + G+MS + PNS + + +I G C E EA +FE M G+ PD + Y
Sbjct: 271 AKALIDGVMSC----RMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYF 326
Query: 100 SLIDLLCDYDDKTDKADKVLREMIDRGFSPS 130
+LI LC D + A + RE +++ + PS
Sbjct: 327 TLIHCLCKGGD-FETALILCRESMEKNWVPS 356
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 55 GVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLCDYDDKTDK 114
G+EP+ ++ N +I+ LC T + + EM+RK P ++ +ID ++K D+
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYK-EEKFDE 235
Query: 115 ADKVLREMIDRGFSPSVVEYNKLIRAYC 142
KV+R M + G V YN +I+ C
Sbjct: 236 VRKVMRMMDEFGVHVGVATYNIMIQCLC 263
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K L AM + P+ N VI LC + R EA EVF E+ KG P+ TY SL+
Sbjct: 300 KAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLL 359
Query: 103 DLLCDYDDKTDKADKVLREMIDRGF--SPSVVEYNKLIR 139
LC +T+K +++ EM +G SP+ V ++ L++
Sbjct: 360 KHLCKI-RRTEKVWELVEEMELKGGSCSPNDVTFSYLLK 397
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 43 KVAGLMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLI 102
K +M M KGVE + ++ L + EAE ++ EM KG D Y +
Sbjct: 192 KAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYN--V 249
Query: 103 DLLCDYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAYCCYG 145
L+ + ++ +++ EM G P V YN L+ AYC G
Sbjct: 250 RLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKG 292
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 24 AGSLEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTK 77
AG L P+++ +++I+ K L +A M ++G PN + N ++ + +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLL--CDYDDKTDKADKVLREMIDRGFSPSVVEYN 135
A +++ +M+ GF PD+ TY+ ++++L C Y ++A+ V EM + + P Y
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY---LEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 136 KLI 138
L+
Sbjct: 579 LLV 581
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 24 AGSLEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTK 77
AG L P+++ +++I+ K L +A M ++G PN + N ++ + +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLL--CDYDDKTDKADKVLREMIDRGFSPSVVEYN 135
A +++ +M+ GF PD+ TY+ ++++L C Y ++A+ V EM + + P Y
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY---LEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 136 KLI 138
L+
Sbjct: 579 LLV 581
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 24 AGSLEPESWPNTMMISAKKKVAGLMSA------MTEKGVEPNSDSLNEVIQGLCREWRTK 77
AG L P+++ +++I+ K L +A M ++G PN + N ++ + +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 78 EAEEVFEEMKRKGFAPDEKTYTSLIDLL--CDYDDKTDKADKVLREMIDRGFSPSVVEYN 135
A +++ +M+ GF PD+ TY+ ++++L C Y ++A+ V EM + + P Y
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY---LEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 136 KLI 138
L+
Sbjct: 579 LLV 581
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 47 LMSAMTEKGVEPNSDSLNEVIQGLCREWRTKEAEEVFEEMKRKGFAPDEKTYTSLIDLLC 106
L+ M E GV PN+ S + ++ + EA VF EMK A D T +ID+
Sbjct: 282 LIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYG 341
Query: 107 DYDDKTDKADKVLREMIDRGFSPSVVEYNKLIRAY 141
D +AD++ + P+VV YN ++R Y
Sbjct: 342 QL-DMVKEADRLFWSLRKMDIEPNVVSYNTILRVY 375