Miyakogusa Predicted Gene

Lj0g3v0223749.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223749.1 Non Chatacterized Hit- tr|I1JL64|I1JL64_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,64.04,6e-18,FAM175PLANT,FAM175 family, plant; PROTEINF175,FAM175
family; seg,NULL,CUFF.14548.1
         (300 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G08780.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   230   7e-61
AT3G08780.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   227   7e-60

>AT3G08780.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: male
           gametophyte, cultured cell; EXPRESSED DURING: L mature
           pollen stage, M germinated pollen stage; Has 35333 Blast
           hits to 34131 proteins in 2444 species: Archae - 798;
           Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
           531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
           BLink). | chr3:2666514-2667452 REVERSE LENGTH=312
          Length = 312

 Score =  230 bits (587), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 133/304 (43%), Positives = 168/304 (55%), Gaps = 13/304 (4%)

Query: 1   MDDPPLQNIAISGPTLASLIQRFSTAPSAIDGLLFGHVTHVXXXXXX-------XXXXXX 53
           MDD  L+ I ISGPTLASLIQR S++PS +DGL+FG +  +                   
Sbjct: 1   MDDLSLEKIEISGPTLASLIQRASSSPSDVDGLIFGQIHRIVSSNLSDDSPADIASSSSS 60

Query: 54  XXXXXXXVTGFLSSP---SFHDSTGAVNXXXXXXXXXXX-XXXXGWFSARRRTPLRPSMR 109
                  VT F+ S    SF+D  G V+                GWFSARR+T  RPSMR
Sbjct: 61  SDQIVATVTSFICSGKTVSFYDPLGRVDSRRIDSLRVDSPDHLIGWFSARRKTANRPSMR 120

Query: 110 EXXXXXXXXXXXXXXXPIENSPHHRFNXXXXXXXXXXXXXXTSSHVHTHEYRAYQFRRAA 169
           E               PIE+  + R                T   +HTHEYRAYQFR + 
Sbjct: 121 ELAVTSSLSSQFHL--PIEDLQNPRSMNMASSVFFLLTMPLTDQCIHTHEYRAYQFRSSK 178

Query: 170 LSFDAKSINIVNIGPAFRGHYGSFSPNSPLPALNCRLRGSPMKGDDGDERLSEMKQAAKD 229
              + +S+ IVNIGPAFRGHYGSFSP S  P L C L  S M  D  +  LS  KQ+AKD
Sbjct: 179 QRLEPRSVGIVNIGPAFRGHYGSFSPKSGFPPLICELSSSAMSVDCDESSLSAKKQSAKD 238

Query: 230 QRELDACVEGFEVGRLSSLMGSEATSYTQGLEDLYQKMLVKIETLTSLVEKSSAKVLEQV 289
           Q+E+DA  EGF+VG L  L+G+EA +YT G+E++Y++ML KIE+L S VEKSSA+V +QV
Sbjct: 239 QKEIDALAEGFQVGELKRLVGAEAANYTGGIEEMYERMLAKIESLASDVEKSSARVFQQV 298

Query: 290 SFYL 293
             +L
Sbjct: 299 QNHL 302


>AT3G08780.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: male
           gametophyte, cultured cell; EXPRESSED DURING: L mature
           pollen stage, M germinated pollen stage; Has 129 Blast
           hits to 129 proteins in 38 species: Archae - 0; Bacteria
           - 0; Metazoa - 96; Fungi - 0; Plants - 31; Viruses - 0;
           Other Eukaryotes - 2 (source: NCBI BLink). |
           chr3:2666376-2667452 REVERSE LENGTH=313
          Length = 313

 Score =  227 bits (579), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/299 (43%), Positives = 165/299 (55%), Gaps = 13/299 (4%)

Query: 1   MDDPPLQNIAISGPTLASLIQRFSTAPSAIDGLLFGHVTHVXXXXXX-------XXXXXX 53
           MDD  L+ I ISGPTLASLIQR S++PS +DGL+FG +  +                   
Sbjct: 1   MDDLSLEKIEISGPTLASLIQRASSSPSDVDGLIFGQIHRIVSSNLSDDSPADIASSSSS 60

Query: 54  XXXXXXXVTGFLSSP---SFHDSTGAVNXXXXXXXXXXX-XXXXGWFSARRRTPLRPSMR 109
                  VT F+ S    SF+D  G V+                GWFSARR+T  RPSMR
Sbjct: 61  SDQIVATVTSFICSGKTVSFYDPLGRVDSRRIDSLRVDSPDHLIGWFSARRKTANRPSMR 120

Query: 110 EXXXXXXXXXXXXXXXPIENSPHHRFNXXXXXXXXXXXXXXTSSHVHTHEYRAYQFRRAA 169
           E               PIE+  + R                T   +HTHEYRAYQFR + 
Sbjct: 121 ELAVTSSLSSQFHL--PIEDLQNPRSMNMASSVFFLLTMPLTDQCIHTHEYRAYQFRSSK 178

Query: 170 LSFDAKSINIVNIGPAFRGHYGSFSPNSPLPALNCRLRGSPMKGDDGDERLSEMKQAAKD 229
              + +S+ IVNIGPAFRGHYGSFSP S  P L C L  S M  D  +  LS  KQ+AKD
Sbjct: 179 QRLEPRSVGIVNIGPAFRGHYGSFSPKSGFPPLICELSSSAMSVDCDESSLSAKKQSAKD 238

Query: 230 QRELDACVEGFEVGRLSSLMGSEATSYTQGLEDLYQKMLVKIETLTSLVEKSSAKVLEQ 288
           Q+E+DA  EGF+VG L  L+G+EA +YT G+E++Y++ML KIE+L S VEKSSA+V +Q
Sbjct: 239 QKEIDALAEGFQVGELKRLVGAEAANYTGGIEEMYERMLAKIESLASDVEKSSARVFQQ 297