Miyakogusa Predicted Gene

Lj0g3v0223529.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223529.1 tr|A9RVE0|A9RVE0_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,24.23,1e-18,seg,NULL; Mitochondrial termination factor
repeats,Mitochodrial transcription termination factor-rel,CUFF.14524.1
         (320 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G38160.2 | Symbols: pde191 | Mitochondrial transcription term...   440   e-124
AT4G38160.1 | Symbols: pde191 | Mitochondrial transcription term...   440   e-124
AT4G38160.3 | Symbols: pde191 | Mitochondrial transcription term...   439   e-123
AT2G21710.1 | Symbols: EMB2219 | Mitochondrial transcription ter...   126   2e-29
AT1G78930.1 | Symbols:  | Mitochondrial transcription terminatio...   125   3e-29
AT4G02990.1 | Symbols:  | Mitochondrial transcription terminatio...   108   6e-24
AT2G44020.1 | Symbols:  | Mitochondrial transcription terminatio...   108   7e-24
AT4G14605.1 | Symbols:  | Mitochondrial transcription terminatio...   103   2e-22
AT5G55580.1 | Symbols:  | Mitochondrial transcription terminatio...    94   1e-19
AT2G03050.1 | Symbols: EMB93, SOLDAT10 | Mitochondrial transcrip...    91   1e-18
AT3G18870.1 | Symbols:  | Mitochondrial transcription terminatio...    86   4e-17
AT2G34620.1 | Symbols:  | Mitochondrial transcription terminatio...    84   1e-16
AT2G36000.2 | Symbols:  | Mitochondrial transcription terminatio...    83   2e-16
AT2G36000.1 | Symbols:  | Mitochondrial transcription terminatio...    83   2e-16
AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active...    82   5e-16
AT1G21150.1 | Symbols:  | Mitochondrial transcription terminatio...    70   2e-12
AT5G64950.1 | Symbols:  | Mitochondrial transcription terminatio...    55   7e-08
AT1G74120.1 | Symbols:  | Mitochondrial transcription terminatio...    54   1e-07
AT1G62085.1 | Symbols:  | Mitochondrial transcription terminatio...    53   2e-07
AT1G62110.1 | Symbols:  | Mitochondrial transcription terminatio...    53   2e-07
AT3G46950.1 | Symbols:  | Mitochondrial transcription terminatio...    53   3e-07
AT1G62150.1 | Symbols:  | Mitochondrial transcription terminatio...    52   4e-07
AT5G07900.1 | Symbols:  | Mitochondrial transcription terminatio...    52   8e-07
AT1G61970.2 | Symbols:  | Mitochondrial transcription terminatio...    49   6e-06
AT1G61970.1 | Symbols:  | Mitochondrial transcription terminatio...    49   6e-06
AT1G56380.1 | Symbols:  | Mitochondrial transcription terminatio...    48   7e-06
AT1G56380.2 | Symbols:  | Mitochondrial transcription terminatio...    48   8e-06

>AT4G38160.2 | Symbols: pde191 | Mitochondrial transcription
           termination factor family protein |
           chr4:17902412-17903784 FORWARD LENGTH=363
          Length = 363

 Score =  440 bits (1132), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/310 (67%), Positives = 255/310 (82%), Gaps = 2/310 (0%)

Query: 13  MMWFFKDRGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSI-GIQERKLPSIVSKCPK 71
           +MWFF+D+GFDD SI  M RKCK+LE    + A+ENW+YL +I GIQERKLP IVS+CPK
Sbjct: 9   IMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRCPK 68

Query: 72  ILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPE 131
           IL L L+E+++PMVECL +LG  P EVASAI KFP ILSHSVEEKLCPLLAFFQALGVPE
Sbjct: 69  ILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPE 128

Query: 132 KQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLD 191
            Q+GKMIL NPRLISYSI+TK+  IV FLA LGL++DGMIGKVLVK+P++MGYSV+KRL 
Sbjct: 129 TQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLR 188

Query: 192 PTSQFLK-SIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGF 250
           PT++FLK S+GL+E  ++ V MNFP +L RDVNK+L PN+ YLK+CGF D QI  +V G+
Sbjct: 189 PTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGY 248

Query: 251 PPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCS 310
           P ILIKS++NSL+PRI+FLV VMGR +DEV  YP FF HGLKKK++ R K +K+ N+ CS
Sbjct: 249 PQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCS 308

Query: 311 LSEMLDCNEK 320
           L EMLDCN K
Sbjct: 309 LREMLDCNTK 318


>AT4G38160.1 | Symbols: pde191 | Mitochondrial transcription
           termination factor family protein |
           chr4:17902412-17903413 FORWARD LENGTH=333
          Length = 333

 Score =  440 bits (1132), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/310 (67%), Positives = 255/310 (82%), Gaps = 2/310 (0%)

Query: 13  MMWFFKDRGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSI-GIQERKLPSIVSKCPK 71
           +MWFF+D+GFDD SI  M RKCK+LE    + A+ENW+YL +I GIQERKLP IVS+CPK
Sbjct: 9   IMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRCPK 68

Query: 72  ILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPE 131
           IL L L+E+++PMVECL +LG  P EVASAI KFP ILSHSVEEKLCPLLAFFQALGVPE
Sbjct: 69  ILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPE 128

Query: 132 KQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLD 191
            Q+GKMIL NPRLISYSI+TK+  IV FLA LGL++DGMIGKVLVK+P++MGYSV+KRL 
Sbjct: 129 TQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLR 188

Query: 192 PTSQFLK-SIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGF 250
           PT++FLK S+GL+E  ++ V MNFP +L RDVNK+L PN+ YLK+CGF D QI  +V G+
Sbjct: 189 PTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGY 248

Query: 251 PPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCS 310
           P ILIKS++NSL+PRI+FLV VMGR +DEV  YP FF HGLKKK++ R K +K+ N+ CS
Sbjct: 249 PQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCS 308

Query: 311 LSEMLDCNEK 320
           L EMLDCN K
Sbjct: 309 LREMLDCNTK 318


>AT4G38160.3 | Symbols: pde191 | Mitochondrial transcription
           termination factor family protein |
           chr4:17902412-17903904 FORWARD LENGTH=378
          Length = 378

 Score =  439 bits (1129), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/310 (67%), Positives = 255/310 (82%), Gaps = 2/310 (0%)

Query: 13  MMWFFKDRGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSI-GIQERKLPSIVSKCPK 71
           +MWFF+D+GFDD SI  M RKCK+LE    + A+ENW+YL +I GIQERKLP IVS+CPK
Sbjct: 9   IMWFFRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRCPK 68

Query: 72  ILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPE 131
           IL L L+E+++PMVECL +LG  P EVASAI KFP ILSHSVEEKLCPLLAFFQALGVPE
Sbjct: 69  ILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPE 128

Query: 132 KQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLD 191
            Q+GKMIL NPRLISYSI+TK+  IV FLA LGL++DGMIGKVLVK+P++MGYSV+KRL 
Sbjct: 129 TQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLR 188

Query: 192 PTSQFLK-SIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGF 250
           PT++FLK S+GL+E  ++ V MNFP +L RDVNK+L PN+ YLK+CGF D QI  +V G+
Sbjct: 189 PTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGY 248

Query: 251 PPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCS 310
           P ILIKS++NSL+PRI+FLV VMGR +DEV  YP FF HGLKKK++ R K +K+ N+ CS
Sbjct: 249 PQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCS 308

Query: 311 LSEMLDCNEK 320
           L EMLDCN K
Sbjct: 309 LREMLDCNTK 318


>AT2G21710.1 | Symbols: EMB2219 | Mitochondrial transcription
           termination factor family protein | chr2:9270886-9273307
           FORWARD LENGTH=641
          Length = 641

 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 165/317 (52%), Gaps = 40/317 (12%)

Query: 41  HQEKANENWEYLRSIGIQERKLPSIVSKCPKILA---------------LGLNE------ 79
           ++E+ NE  EYL S G++   +  +V +CP++L+               +G+N+      
Sbjct: 277 NREELNEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTM 336

Query: 80  -----KIVPM---------VECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQ 125
                KI+           +  LK  G    EV   +A  PH++  S+EE+  PL+ +F 
Sbjct: 337 VYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFY 396

Query: 126 ALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYS 185
            LG+P++ + +++++ P L    +E  +A  V FL  +G+  +  IG +LVK P ++  S
Sbjct: 397 YLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA-IGNMLVKFPSLLTNS 455

Query: 186 VEKRLDPTSQF-LKSIGLAEKDL-QVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQI 243
           + K++ P   F L   G+ +KD+ +V+AM+ P++L   +   L PN  Y    G +  Q+
Sbjct: 456 LYKKIRPVVIFLLTRAGVTQKDIGKVIAMD-PALLGCSIGTKLEPNMRYYISLGIRFYQL 514

Query: 244 VDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLK 303
            +++  FP +L  ++ N L P+ ++L   M R + +++++P FF + L++++  RH  + 
Sbjct: 515 GEMIADFPMLLRYNVDN-LRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMV 573

Query: 304 QRNLSCSLSEMLDCNEK 320
           +  ++  L  ML C ++
Sbjct: 574 ENRVNFKLRYMLACTDE 590



 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 106/231 (45%), Gaps = 36/231 (15%)

Query: 79  EKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMI 138
           + I  M+E LK++  K   +A A  +    +     E+L  ++ + ++ GV    +G ++
Sbjct: 243 DSIRIMIEWLKSIHVKGEFIAVAFLRSGDNILQRNREELNEIVEYLESNGVRRDWMGYVV 302

Query: 139 LLNPRLISYSIETKMAEIVDFLAGLGLNKDGM---------------------------- 170
              P L+S+S+E ++   VDF   +G+N++                              
Sbjct: 303 GRCPELLSFSME-EVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKE 361

Query: 171 -------IGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVN 223
                  +G++L   P++MG S+E+R  P  ++   +G+ ++ ++ + +  P +   D+ 
Sbjct: 362 FGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLE 421

Query: 224 KLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMG 274
           K + P   +L++ G  +  I +++V FP +L  S+   + P + FL+   G
Sbjct: 422 KTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAG 472


>AT1G78930.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:29678285-29680648 REVERSE
           LENGTH=591
          Length = 591

 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 166/337 (49%), Gaps = 40/337 (11%)

Query: 21  GFDDNSIQGMFRKCKRLEVVHQEKANENW-EYLRSIGIQERKLPSIVSKCPKILALGLNE 79
           G  D S + +     RL ++ +E   +   E+L SIGI +  L  ++   P I+ LG  E
Sbjct: 239 GSVDASFRFLLESFPRLLLLSEENDMKPMVEFLESIGIPKYCLGKVLLLYPPIM-LGKTE 297

Query: 80  KIVPMV-ECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQA------------ 126
           +I   V   ++ +     +    + K+P ILS S++E    + +FF +            
Sbjct: 298 EIKRRVATAMEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDIDHAI 357

Query: 127 -----------------------LGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGL 163
                                  LGV +K++GK+I   P+L+    + +  ++V FL  L
Sbjct: 358 RRWPLLLGCSASNMEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQ-EFLKVVCFLEDL 416

Query: 164 GLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVN 223
           G  K+ ++G++L + P I G S+EK L     FL   G++      +   +P  L  D +
Sbjct: 417 GFQKE-IVGQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDAD 475

Query: 224 KLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDY 283
           K ++P   YL + G  +R+I  ++  F PIL  SI   L P+ +FLV+ M + V EV++Y
Sbjct: 476 KTVLPRLKYLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEY 535

Query: 284 PCFFRHGLKKKLQLRHKFLKQRNLSCSLSEMLDCNEK 320
           P +F + L+K+++ R + LK RN+ C+L EML  N++
Sbjct: 536 PRYFSYSLEKRIKPRFRVLKGRNIECTLQEMLGKNDE 572



 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 112/242 (46%), Gaps = 10/242 (4%)

Query: 74  ALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQ 133
            L   EKI      L  LG+        +  FP +L  S E  + P++ F +++G+P+  
Sbjct: 221 TLSFFEKIEARRGGLDMLGSVDASFRFLLESFPRLLLLSEENDMKPMVEFLESIGIPKYC 280

Query: 134 IGKMILLNPRLISYSIETKMAEIVDFLAGLG-LNKDGMIGKVLVKDPYIMGYSVEKRLDP 192
           +GK++LL P ++    E     +   +  +  +NKD   GK+L+K P+I+  S+++    
Sbjct: 281 LGKVLLLYPPIMLGKTEEIKRRVATAMEKVSVVNKDS--GKLLLKYPWILSPSIQENYSH 338

Query: 193 TSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPP 252
              F  S  + + D+      +P +L    + + +    +  K G +D+++  ++   P 
Sbjct: 339 IGSFFYSESVLKMDIDHAIRRWPLLLGCSASNMEMMVKEF-DKLGVRDKRMGKVIPKMPQ 397

Query: 253 ILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPC----FFRHGLKKKLQLRHKFLKQRNLS 308
           +L+   Q  L+  + FL D +G Q + V    C     F   ++K LQ +  FL +  +S
Sbjct: 398 LLLCKPQEFLKV-VCFLED-LGFQKEIVGQILCRCPEIFGCSIEKTLQKKLIFLTRFGVS 455

Query: 309 CS 310
            +
Sbjct: 456 TT 457


>AT4G02990.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr4:1322158-1323783 FORWARD
           LENGTH=541
          Length = 541

 Score =  108 bits (270), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 150/307 (48%), Gaps = 38/307 (12%)

Query: 50  EYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHIL 109
           +YL  +G+++      + + P++L   +   + P+V+ L+ L  KP +V   + ++P +L
Sbjct: 184 DYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEVL 243

Query: 110 SHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDG 169
              +E  +   +A+   +GV  ++IG ++   P ++   +   +  +V++L  LG+ +  
Sbjct: 244 GFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRLA 303

Query: 170 MIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDV------- 222
              +++ K P+I+G+ ++  + P  Q L+   + E  L  +   +P I+  D+       
Sbjct: 304 A-ARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQ 362

Query: 223 NKLL-----------------VPNHA------------YLKKCGFQDRQIVDLVVGFPPI 253
            KLL                 +P               +L KCGF   Q  ++V+G P +
Sbjct: 363 RKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQV 422

Query: 254 LIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCSLSE 313
           L  ++   ++   ++    M R + ++VD+P FF +GL+  ++ RHK + ++ + CSL+ 
Sbjct: 423 LALNL-GIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAW 481

Query: 314 MLDCNEK 320
           ML+C+++
Sbjct: 482 MLNCSDE 488



 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 140/290 (48%), Gaps = 20/290 (6%)

Query: 18  KDRGFDDNSIQGMFRKCKRLEVVHQEKANEN--WEYLRSIGIQERKLPSIVSKCPKILAL 75
           KD+G D  S   ++ +   L++  ++ AN    +E+LR IGI   +L  +  + P + A 
Sbjct: 92  KDKGRDSKS---LYSRPSLLDMNKEKAANRAKVYEFLRGIGIVPDELDGL--ELP-VTAD 145

Query: 76  GLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIG 135
            + E+    VE L  LG    +    I  +P +L  SV++ + P+L +   LGV +    
Sbjct: 146 VMKER----VEFLHKLGLTIED----INNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFT 197

Query: 136 KMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQ 195
           + +   P+++  S+   +A +V +L GL + K   + +VL + P ++G+ +E  +  +  
Sbjct: 198 EFLRRYPQVLHSSVVIDLAPVVKYLQGLDI-KPSDVPRVLERYPEVLGFKLEGTMSTSVA 256

Query: 196 FLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILI 255
           +L  IG+A +++  +   +P IL   V +++ P   YL+  G        L+   P IL 
Sbjct: 257 YLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILG 316

Query: 256 KSIQNSLEPRIKFLVDVMGRQVDE---VVDYPCFFRHGLKKKLQLRHKFL 302
             + ++++P ++ L D   R+      +  YP      LK KL  + K L
Sbjct: 317 FELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLL 366


>AT2G44020.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr2:18217737-18219260 REVERSE
           LENGTH=507
          Length = 507

 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 42/308 (13%)

Query: 51  YLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILS 110
           YL  IGI   KL   V   P++L   +  ++ P+V+ L+ L  +  ++   + K+P +L 
Sbjct: 150 YLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELLG 209

Query: 111 HSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGM 170
             +E  +   +A+  ++GV  + IG M+   P L+   + T +  +VD+L  +GL K  +
Sbjct: 210 FKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKK-I 268

Query: 171 IGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSIL------------ 218
           + ++L K  YI+GY++E+ + P    L S G+ ++ L ++   +P IL            
Sbjct: 269 VARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQYPQILGLPVKAKMSTQQ 328

Query: 219 --------------SRDVNKLLVPNHAYLKKC------------GFQDRQIVDLVVGFPP 252
                         +R V K+  P    LK+              FQ   I  +VV  P 
Sbjct: 329 YFFSLKLKIDPEGFARVVEKM--PQIVSLKQNVIMKPIEFLLGRAFQVEDIAKMVVRCPQ 386

Query: 253 ILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCSLS 312
           IL   ++  ++    F    MGR + E+V+YP +F + L+ +++ R++ L+ + +  SL+
Sbjct: 387 ILCSRVE-LMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPRYQKLQSKGIRSSLN 445

Query: 313 EMLDCNEK 320
             L+C+++
Sbjct: 446 WFLNCSDQ 453



 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 106/208 (50%), Gaps = 5/208 (2%)

Query: 47  ENWEYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFP 106
           E  E+L+ +G+        +++ P +L   + + ++P++  L+ +G    ++   +  +P
Sbjct: 114 ERVEFLQKLGLTIDD----INEYPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYP 169

Query: 107 HILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLN 166
            +L  SV  +L P++ F + L V ++ +G +++  P L+ + +E  M+  V +L  +G++
Sbjct: 170 QVLHASVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVS 229

Query: 167 KDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLL 226
               IG ++ + PY++G  V   + P   +L SIGL +K +  +      I+  ++ + +
Sbjct: 230 PRD-IGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETV 288

Query: 227 VPNHAYLKKCGFQDRQIVDLVVGFPPIL 254
            PN   L   G +   +  L+  +P IL
Sbjct: 289 KPNVDCLISFGVKKELLPLLIAQYPQIL 316



 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 32/190 (16%)

Query: 153 MAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAM 212
           M E V+FL  LGL  D      + + P ++G SV K L P   +L+ IG++   L     
Sbjct: 112 MCERVEFLQKLGLTIDD-----INEYPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVK 166

Query: 213 NFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDV 272
           N+P +L   V   L P   +L+    + + +  +++ +P +L   ++ ++   + +LV +
Sbjct: 167 NYPQVLHASVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSI 226

Query: 273 ---------------------MGRQVDEVVDYPCFFRHGLKKKLQLR----HKFLKQRNL 307
                                +G  +  +VDY      GL KK+  R      ++   NL
Sbjct: 227 GVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDY--LISIGLPKKIVARMLEKRSYIVGYNL 284

Query: 308 SCSLSEMLDC 317
             ++   +DC
Sbjct: 285 EETVKPNVDC 294


>AT4G14605.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr4:8378815-8380564 FORWARD
           LENGTH=493
          Length = 493

 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 135/258 (52%), Gaps = 6/258 (2%)

Query: 61  KLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPL 120
           ++ +I  K        L+ KI P+VE L  LG    ++ + + K P I   S+ + L P 
Sbjct: 212 QIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPT 271

Query: 121 LAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPY 180
           +AF + LG+ + Q  K+I   P +++YS + K+   V+FL+  GL ++  IG++L + P 
Sbjct: 272 MAFLETLGIDKNQWAKIISRFPAILTYSRQ-KLTSTVEFLSQTGLTEE-QIGRILTRCPN 329

Query: 181 IMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQD 240
           IM YSVE +L PT ++ +S+ +   D+ V+    P      +   L P   +  + GF  
Sbjct: 330 IMSYSVEDKLRPTMEYFRSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGL 386

Query: 241 RQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHK 300
            +I  ++  +  +   S++ ++ P+  +    M     E+V +P FF + L+++++ R++
Sbjct: 387 DEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYSLQERIKPRYE 445

Query: 301 FLKQRNLSCSLSEMLDCN 318
            +++  +   L+++L  +
Sbjct: 446 LVQRSGVRLLLNQVLSLS 463



 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 116/220 (52%), Gaps = 9/220 (4%)

Query: 50  EYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHIL 109
           E+L  +GI +  +P+I+ K P+I  + L + + P +  L+TLG   ++ A  I++FP IL
Sbjct: 237 EFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAIL 296

Query: 110 SHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDG 169
           ++S  +KL   + F    G+ E+QIG+++   P ++SYS+E K+   +++   L ++   
Sbjct: 297 TYS-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVD--- 352

Query: 170 MIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPN 229
            +  +L + P   G S+E  L P ++F    G    ++ ++   + ++ +  + + ++P 
Sbjct: 353 -VAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPK 411

Query: 230 HAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFL 269
             Y +   +   ++V     FP     S+Q  ++PR + +
Sbjct: 412 WDYFQTMDYPKSELVK----FPQFFGYSLQERIKPRYELV 447



 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 8/189 (4%)

Query: 14  MWFFKDRGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKIL 73
           M F +  G D N    +  +   +    ++K     E+L   G+ E ++  I+++CP I+
Sbjct: 272 MAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIM 331

Query: 74  ALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQ 133
           +  + +K+ P +E  ++L     +VA  + + P     S+E  L P+  FF   G    +
Sbjct: 332 SYSVEDKLRPTMEYFRSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDE 388

Query: 134 IGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPT 193
           IG MI     L ++S++  +    D+   +   K       LVK P   GYS+++R+ P 
Sbjct: 389 IGIMISRYGALYTFSLKENVMPKWDYFQTMDYPKSE-----LVKFPQFFGYSLQERIKPR 443

Query: 194 SQFLKSIGL 202
            + ++  G+
Sbjct: 444 YELVQRSGV 452


>AT5G55580.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr5:22515601-22517408 FORWARD
           LENGTH=496
          Length = 496

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 128/262 (48%), Gaps = 18/262 (6%)

Query: 50  EYLRSIGIQE--------RKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASA 101
           +YL + G++E        R +PS+     +I      E++    + L ++G K  ++   
Sbjct: 189 DYLSTFGLKESHFVQMYERHMPSL-----QINVFSAQERL----DYLLSVGVKHRDIKRM 239

Query: 102 IAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLA 161
           + + P IL ++VE  L   ++F   LG+P  +IG+++   P L SYS+E  +   + +L 
Sbjct: 240 LLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLI 299

Query: 162 GLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFL-KSIGLAEKDLQVVAMNFPSILSR 220
                K+  +GKV+   P I+   ++   +    FL K +G     +  +    P +L  
Sbjct: 300 EEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHY 359

Query: 221 DVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEV 280
            ++   +P   +L+  G  +  I+ ++     +L  S++++L+P+  +LV+ +  +V  +
Sbjct: 360 SIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHIL 419

Query: 281 VDYPCFFRHGLKKKLQLRHKFL 302
             YP +    L ++++ RH+FL
Sbjct: 420 TKYPMYLSLSLDQRIRPRHRFL 441



 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 117/230 (50%), Gaps = 6/230 (2%)

Query: 45  ANENWEYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAK 104
           A E  +YL S+G++ R +  ++ + P+IL   +   +   +  L  LG    ++   +A 
Sbjct: 219 AQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAA 278

Query: 105 FPHILSHSVEEKLCPLLAFF-QALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAG- 162
            P + S+SVE  L P + +  + +G+ E  +GK++ L+P+++   ++        FL+  
Sbjct: 279 TPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKE 338

Query: 163 LGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDV 222
           LG  +D ++ K++ K P ++ YS++    P   FL+SIG+   D+  V  +   +LS  +
Sbjct: 339 LGAPRDSVV-KMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSL 397

Query: 223 NKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDV 272
              L P + YL     +    V ++  +P  L  S+   + PR +FLV++
Sbjct: 398 EDNLKPKYMYLVN---ELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVEL 444


>AT2G03050.1 | Symbols: EMB93, SOLDAT10 | Mitochondrial
           transcription termination factor family protein |
           chr2:900094-900945 REVERSE LENGTH=283
          Length = 283

 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 121/233 (51%), Gaps = 7/233 (3%)

Query: 88  LKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISY 147
           L+ L   PH+   A+   P + S  +   +  +     + G+    +G+++ + P L++ 
Sbjct: 39  LQDLNVDPHK---ALRVNPSLRSAPIS-SVVSVETLLSSTGLSRPAVGRILDMFPDLLTS 94

Query: 148 SIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDL 207
             E+++  ++ FL+      +  I K + + P ++  SV+ +L P   FLK++G   +D 
Sbjct: 95  DPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRD- 153

Query: 208 QVVAMNFPSILSRDVNKLLVPNHAYLKK-CGFQDRQIVDLVVGFPPILIKSIQNSLEPRI 266
             +      +L  +V + L+P   YL++  GF   ++  +VV  P +L  S+ N+L P++
Sbjct: 154 -TITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKV 212

Query: 267 KFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCSLSEMLDCNE 319
           +F ++ M   V E+  +P +F   L++K++ RH+ LK+  +   LSEML  ++
Sbjct: 213 EFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSD 265



 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 11/151 (7%)

Query: 55  IGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVE 114
           I I E+ +P  +S+CP++L   ++ ++ P +  LKTLG    +  +  ++   +L  +VE
Sbjct: 111 ISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTIT--SRNTVLLVSNVE 168

Query: 115 EKLCPLLAFF-QALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGK 173
             L P + +  + LG   +++ KM++ +P L++YS++  +   V+F        + M G 
Sbjct: 169 RTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFI------EEMRGD 222

Query: 174 V--LVKDPYIMGYSVEKRLDPTSQFLKSIGL 202
           V  L + P    +S+E+++ P  + LK  G+
Sbjct: 223 VKELKRFPQYFSFSLERKIKPRHRLLKEHGI 253


>AT3G18870.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr3:6508515-6509339 REVERSE
           LENGTH=274
          Length = 274

 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 105/190 (55%), Gaps = 6/190 (3%)

Query: 128 GVPEKQIGKMILLNPRLISYSIE-TKMAEIVDFLAG-LGLNKDGMIGKVLVKDPYIMGYS 185
           G+ ++   +++ L P+L S + + +K+  + DFL G LG + +   G ++V  P I+   
Sbjct: 76  GISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRG-LIVNCPNILFSD 134

Query: 186 VEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVD 245
           VE  L PT  +LK +G+  ++L   +     +L+  V KL      +LK  GF+  +   
Sbjct: 135 VEYCLRPTLVYLKELGV--RNLNRASKTNAHVLNTRVEKLRA-KMRFLKSIGFEHEEAAR 191

Query: 246 LVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQR 305
           +    P I   S++++L P+ +FLV  M R+++E+  +P +F   L K+++ RH  LK++
Sbjct: 192 VCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRPRHWHLKKK 251

Query: 306 NLSCSLSEML 315
           N+  SLS ML
Sbjct: 252 NVRVSLSRML 261



 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 9/186 (4%)

Query: 52  LRSIGIQERKLPSIVSKCPKILALGLN-EKIVPMVECLK-TLGTKPHEVASAIAKFPHIL 109
           L+S GI +   P +V  CP++ +   +  K+ P+ + L   LG    E    I   P+IL
Sbjct: 72  LKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCPNIL 131

Query: 110 SHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDG 169
              VE  L P L + + LGV  + + +    N  +++  +E K+   + FL  +G   + 
Sbjct: 132 FSDVEYCLRPTLVYLKELGV--RNLNRASKTNAHVLNTRVE-KLRAKMRFLKSIGFEHEE 188

Query: 170 MIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPN 229
              +V  + P I GYSVE  L P  +FL  +   E++L+ +   FP   +  + K + P 
Sbjct: 189 A-ARVCGRIPAIFGYSVEDNLRPKFEFL--VYDMERELEELK-KFPQYFAFSLGKRIRPR 244

Query: 230 HAYLKK 235
           H +LKK
Sbjct: 245 HWHLKK 250


>AT2G34620.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr2:14577196-14578203 FORWARD
           LENGTH=303
          Length = 303

 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 131/250 (52%), Gaps = 10/250 (4%)

Query: 71  KILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVP 130
           + + L + EKI+    CL+ +G    +   A++  P + S  ++  +  +L F Q+ G+ 
Sbjct: 49  QTVTLQMKEKIL----CLELMGI---DSGKALSLNPCLCSAPLDS-IQSVLHFLQSKGIY 100

Query: 131 EKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRL 190
              + +++ + P++++  + T++  +  FL+      +    +V+ K P ++  SVE +L
Sbjct: 101 PNDLPRILGMCPKILTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQL 160

Query: 191 DPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGF 250
            P   +L+ +GL  KDL+ +A   P +L   V   L+P   +L+  GF   + + +++  
Sbjct: 161 KPALFYLQRLGL--KDLEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRC 218

Query: 251 PPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCS 310
           P +   SI+N+ +P++ + +  +  +++ + ++P +F   L+K+++ RH    +R L   
Sbjct: 219 PALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELP 278

Query: 311 LSEMLDCNEK 320
           LS ML   ++
Sbjct: 279 LSLMLKSTDE 288



 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 9/182 (4%)

Query: 51  YLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKT-LGTKPHEVASAIAKFPHIL 109
           +L+S GI    LP I+  CPKIL   +  ++ P+   L   L    +     I K P +L
Sbjct: 93  FLQSKGIYPNDLPRILGMCPKILTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLL 152

Query: 110 SHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDG 169
             SVE++L P L + Q LG+  K +  +   +P L+  S+E  +   + FL  +G ++  
Sbjct: 153 ISSVEDQLKPALFYLQRLGL--KDLEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPE 210

Query: 170 MIGKVLVKDPYIMGYSVEKRLDPT-SQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVP 228
            IG +L + P +  +S+E    P    F+  I    ++L+     FP   +  + K + P
Sbjct: 211 AIGMIL-RCPALFTFSIENNFKPKLDYFMSEIKGKLENLK----EFPQYFAFSLEKRIKP 265

Query: 229 NH 230
            H
Sbjct: 266 RH 267


>AT2G36000.2 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr2:15117181-15118333 FORWARD
           LENGTH=318
          Length = 318

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 96/189 (50%), Gaps = 7/189 (3%)

Query: 132 KQIGKMILLNPRLISYSIETKMAEIVDFL-AGLGLNKDGMIGKVLVKDPYIMGYSVEKRL 190
           +   +++ + P L++  + +    ++ FL   +G++    + + L + P ++  SV+ +L
Sbjct: 122 QDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQL 181

Query: 191 DPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGF 250
            PT  FL+ IG+ +            +LS  V+  LVP   Y +K GF  R    +   F
Sbjct: 182 RPTLYFLQRIGILDPHKHTY------LLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRF 235

Query: 251 PPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCS 310
           P +   SI  + EP++K+L+  MGR V EV+++P +F   L+ +++ RH+    + +   
Sbjct: 236 PQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFP 295

Query: 311 LSEMLDCNE 319
           L  ML  NE
Sbjct: 296 LPVMLKTNE 304



 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 29/199 (14%)

Query: 65  IVSKCPKILALGLNEKIVPMVE-CLKTLGTKP-HEVASAIAKFPHILSHSVEEKLCPLLA 122
           +VS CP++L   L    +P++   L+ +G     ++  A+ + P +L+ SV+ +L P L 
Sbjct: 127 LVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLY 186

Query: 123 FFQALGV--PEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPY 180
           F Q +G+  P K           L+S S++ K+   +D+   LG ++      +  + P 
Sbjct: 187 FLQRIGILDPHKHTY--------LLSCSVDNKLVPRIDYFEKLGFSRRSATA-MFKRFPQ 237

Query: 181 IMGYSVEKRLDPTSQFLK-SIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQ 239
           +  YS+ +  +P  ++L   +G   +D++ V + FP   S  +   + P H      G  
Sbjct: 238 LFNYSIAENYEPKLKYLMVEMG---RDVREV-LEFPQYFSFSLENRIKPRHEACAAKG-- 291

Query: 240 DRQIVDLVVGFP-PILIKS 257
                   V FP P+++K+
Sbjct: 292 --------VRFPLPVMLKT 302


>AT2G36000.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr2:15117181-15118182 FORWARD
           LENGTH=333
          Length = 333

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 7/185 (3%)

Query: 136 KMILLNPRLISYSIETKMAEIVDFL-AGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTS 194
           +++ + P L++  + +    ++ FL   +G++    + + L + P ++  SV+ +L PT 
Sbjct: 126 RLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTL 185

Query: 195 QFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPIL 254
            FL+ IG+ +            +LS  V+  LVP   Y +K GF  R    +   FP + 
Sbjct: 186 YFLQRIGILDPHKHTY------LLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLF 239

Query: 255 IKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQRNLSCSLSEM 314
             SI  + EP++K+L+  MGR V EV+++P +F   L+ +++ RH+    + +   L  M
Sbjct: 240 NYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVM 299

Query: 315 LDCNE 319
           L  NE
Sbjct: 300 LKTNE 304



 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 29/199 (14%)

Query: 65  IVSKCPKILALGLNEKIVPMVE-CLKTLGTKP-HEVASAIAKFPHILSHSVEEKLCPLLA 122
           +VS CP++L   L    +P++   L+ +G     ++  A+ + P +L+ SV+ +L P L 
Sbjct: 127 LVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLY 186

Query: 123 FFQALGV--PEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPY 180
           F Q +G+  P K           L+S S++ K+   +D+   LG ++      +  + P 
Sbjct: 187 FLQRIGILDPHKHTY--------LLSCSVDNKLVPRIDYFEKLGFSRRSATA-MFKRFPQ 237

Query: 181 IMGYSVEKRLDPTSQFLK-SIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQ 239
           +  YS+ +  +P  ++L   +G   +D++ V + FP   S  +   + P H      G  
Sbjct: 238 LFNYSIAENYEPKLKYLMVEMG---RDVREV-LEFPQYFSFSLENRIKPRHEACAAKG-- 291

Query: 240 DRQIVDLVVGFP-PILIKS 257
                   V FP P+++K+
Sbjct: 292 --------VRFPLPVMLKT 302


>AT5G54180.1 | Symbols: PTAC15 | plastid transcriptionally active 15
           | chr5:21988544-21990183 FORWARD LENGTH=500
          Length = 500

 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 135/258 (52%), Gaps = 11/258 (4%)

Query: 65  IVSKCPKILALGLNEKIVPMVECLKTL-GTKPHEVASAIAKFPHILSHSVEEKLCPLLAF 123
           I+++ P IL   L+ +++P V+ ++ L G       + + + P ILS+SVE  +   + F
Sbjct: 234 IIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSVEH-MNGQVEF 292

Query: 124 FQAL-GVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIM 182
            ++  G+  +Q+ K++ + P +IS S E K+   ++FL   G +  GM  K L K P I+
Sbjct: 293 LKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMF-KFLSKAPLIL 351

Query: 183 GYSVEKRLDPTSQFLKSIGLAEKDLQVV-AMNFPSILSRDVNKLLVPNHAYLKKCGFQDR 241
             S E  L     FL  IG   +  ++  AM   +  S D  + ++    YL   G    
Sbjct: 352 ALS-ENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVI--GLYLSY-GLSFE 407

Query: 242 QIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKF 301
            I+ +    P +L +    SLE ++++L++ MGR+V+E++ +P F  + L  +++ R++ 
Sbjct: 408 DILAMSTKHPQVL-QYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEE 466

Query: 302 -LKQRNLSCSLSEMLDCN 318
            LK R  + SL+++L  +
Sbjct: 467 KLKSRGENMSLNKLLTVS 484


>AT1G21150.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:7406406-7407578 REVERSE
           LENGTH=390
          Length = 390

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/256 (20%), Positives = 116/256 (45%), Gaps = 13/256 (5%)

Query: 13  MMWFFKDRGFDDNSIQGMFRKCKR-LEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPK 71
           ++  FKD GF ++ I  + +   R L +  ++  +    +  SIG        ++S  PK
Sbjct: 91  VLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPK 150

Query: 72  ILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPE 131
           +L+  L+++++P  + LK++  +   V   + +     S  +   +   ++  + LGVP+
Sbjct: 151 MLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPD 210

Query: 132 KQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLN--KDGMIGKVLVKDPYIMGYSVEKR 189
           K I  ++  +P    +S E +  E+++ +   G +  K G +  ++  D      + E  
Sbjct: 211 KSIKWLVQASP-FTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFD-----CTSESA 264

Query: 190 LDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVG 249
           ++   +  +  G +++D     M FP+ ++    K++      +   G Q R I    V 
Sbjct: 265 MERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDI----VA 320

Query: 250 FPPILIKSIQNSLEPR 265
            P +L  S++  ++PR
Sbjct: 321 RPVVLSLSMEKRIKPR 336



 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/248 (19%), Positives = 106/248 (42%), Gaps = 35/248 (14%)

Query: 88  LKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISY 147
            K  G    ++ S I  FP +LS S E+ + P L FF ++G       KMI  +P+++SY
Sbjct: 95  FKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSY 154

Query: 148 SIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDL 207
           S+  ++    D L  + + ++ ++ K L +        +   +       + +G+ +K +
Sbjct: 155 SLHKRLIPCYDSLKSILVEEESVV-KCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSI 213

Query: 208 QVVAMNFP-SILSRD--VNKLLVPNHAY-----------------------------LKK 235
           + +    P +  SR+   N++L    +Y                             L +
Sbjct: 214 KWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQ 273

Query: 236 C-GFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKK 294
           C G+     V  ++ FP  +  S +  +   +++LV+ +G Q  ++V  P      ++K+
Sbjct: 274 CFGWSKEDFVAAIMRFPNCVTVSDEKIMYT-LEYLVNNIGLQARDIVARPVVLSLSMEKR 332

Query: 295 LQLRHKFL 302
           ++ R++ +
Sbjct: 333 IKPRNQVI 340


>AT5G64950.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr5:25953887-25955062 FORWARD
           LENGTH=391
          Length = 391

 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 42/207 (20%)

Query: 50  EYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHIL 109
           E+LR  G Q+    +I  + P + +L   E+   +++ LK+      ++  +I   P ++
Sbjct: 43  EFLRDNGFQKPLAIAIAMRYPNLKSL---EQPRSVIQMLKSYSFSDTQIQKSIRVHPRMM 99

Query: 110 SHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDG 169
            ++VE+ L P L FF+ +G     +GK +                               
Sbjct: 100 FYNVEKILEPKLRFFKDIGFTGSGLGKFV------------------------------- 128

Query: 170 MIGKVLVKDPYIMGYSVEKRLDPTSQFLKSI-GLAEKDLQVVAMNFPS-ILSRDVNKLLV 227
                  ++  ++G S+ K+L PT + LKSI     +DL V+       +LSRD N  L+
Sbjct: 129 ------SQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLL 182

Query: 228 PNHAYLKKCGFQDRQIVDLVVGFPPIL 254
           PN +YL+ CG    Q+  L+   P I 
Sbjct: 183 PNISYLETCGIVGSQLASLLRRQPRIF 209


>AT1G74120.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:27871923-27873260 REVERSE
           LENGTH=445
          Length = 445

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/321 (20%), Positives = 139/321 (43%), Gaps = 51/321 (15%)

Query: 21  GFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKIL-ALGLNE 79
           GF  +S+Q    +   L      +   +   L S+ I ++ L S++S CP +L +  L +
Sbjct: 52  GFPPSSLQHFLSRNNHLLNSDLVETEISLGILLSLKIPQKSLVSLISDCPNVLRSEFLRK 111

Query: 80  KIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVE-----EKLCPLLAFFQALGVPEKQI 134
             VP+  C K      H V S+ A    +L HS       +K    +   ++LG  +  +
Sbjct: 112 WRVPLSNCGK------HGVVSSSA-IKSVLEHSSRIGIGPDKFNECVRVLKSLGFCDSTV 164

Query: 135 GKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTS 194
            +++   P ++  + E ++   ++FL G+G+ +D  I +     P ++G   E RL P  
Sbjct: 165 SRILSSFPGVLLVN-EIEIRRKIEFLVGIGIARDN-IERFFHVFPEVLGIGTETRLKPLL 222

Query: 195 QFLKSIGLAEKDLQVVAMNFPSILSRDVNKL-------------------LVPNHAYLKK 235
                +G ++ D++      P +L  ++ +L                   ++   A+  +
Sbjct: 223 DEFMKMGFSKDDVKKEIAREPRVLGLELGELPRCLELINTLKCREVIRVSIISEGAF--R 280

Query: 236 CGFQDRQIVDLVVGF--------------PPILIKSIQNSLEPRIKFLVDVMGRQVDEVV 281
            GF+ +  VD +  +              P +++  I++ +E +I+FL + MG  ++ + 
Sbjct: 281 AGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIED-IEKKIEFLTNRMGFHINCLA 339

Query: 282 DYPCFFRHGLKKKLQLRHKFL 302
           D P +    L+K++  R+  +
Sbjct: 340 DVPEYLGVNLQKQIVPRYNVI 360


>AT1G62085.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22948757-22950142 REVERSE
           LENGTH=461
          Length = 461

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 10/181 (5%)

Query: 21  GFDDNSIQGMFRKCKRLEVVHQEKANE-NWEYLRSIGIQERKLPSIVSKCPKILALGLNE 79
           GFD  + +  F K  R+    ++K  E      +S+G     + ++  KCP  L    N 
Sbjct: 239 GFDPTTSK--FVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFSEN- 295

Query: 80  KIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMIL 139
           KIV   E LK  G    +V S + KFP  ++ S E+K+   +  F  LG    ++  +  
Sbjct: 296 KIVQTWETLKKCGLLEDDVLSVLKKFPQCINAS-EQKIMNSIETFLGLGFSRDEVAMIAK 354

Query: 140 LNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKS 199
             P+ +  S ET + +  +FL    + K     K +V  P ++GYS+EKR  P    +K+
Sbjct: 355 RFPQCLILSAET-VKKKTEFL----VKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVIKA 409

Query: 200 I 200
           +
Sbjct: 410 L 410


>AT1G62110.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22958094-22959482 REVERSE
           LENGTH=462
          Length = 462

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 42/317 (13%)

Query: 13  MMWFFKDRGFDDNSIQGMFRKCKRLEVVHQEKA-NENWEYLRSIGIQERKLPSIVSKCPK 71
           ++  F+  GF ++ I  +     RL ++  EK+ +   ++L S G    +L  IVS  PK
Sbjct: 87  VLSLFRSYGFTNSQISSIITDYPRLLLIDAEKSLDIKLQFLESRGASSPELTQIVSTVPK 146

Query: 72  ILALGLNEKIVPMVECLKTL--GTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGV 129
           IL +   + +    + +K +    K  +  +     P       + +   +L   + LGV
Sbjct: 147 ILGMKEGKSLGRYYDFVKEIIEADKSSKYETLCQPLPEANRQGNKIRNVSVL---RDLGV 203

Query: 130 PEKQIGKMILLNP--------------------------------RLISYSIETKMAEIV 157
           P+K +  +++ +                                 R +    +  + E V
Sbjct: 204 PQKLLFSLLISDAQPVCGKENFEESLKKVVEMGFDPTTSKFVQALRAVYRFTDKTIEERV 263

Query: 158 DFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSI 217
           +   G G   +  +  +  K PY +  S EK++  T + LK  GL E ++  V   +P  
Sbjct: 264 NVYKGFGFAVED-VWAMFKKCPYFLN-SSEKKIGQTIETLKKCGLLEDEVISVLKKYPQC 321

Query: 218 LSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQV 277
           +     K+L     +L   GF   + + +V  FP  LI S + +++ +I+F+V  M   +
Sbjct: 322 IGTSEQKILNSIEIFL-GLGFSRDEFITMVKRFPQCLILSAE-TVKKKIEFVVKKMNWPL 379

Query: 278 DEVVDYPCFFRHGLKKK 294
            +VV  P    + L+K+
Sbjct: 380 KDVVSNPTVLGYNLEKR 396


>AT3G46950.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr3:17289452-17290804 FORWARD
           LENGTH=450
          Length = 450

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 24/190 (12%)

Query: 19  DRGFDDNSIQGMFRKCKRLEVVH------QEKANENWEYLRSIGIQERKLPSIVSKCPKI 72
           D GFD         K K +E +H      ++   E     + +G  E ++ +I  K P  
Sbjct: 228 DMGFDPA-------KSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYF 280

Query: 73  LALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEK 132
           L     +KI+ M E LK  G    E+ S +   P  +  S E+K+   +  F  LG    
Sbjct: 281 LKFS-EKKIILMFETLKKCGLVEEEIISVLKSRPQCIRSS-EQKILDSIEMFLGLGFSRD 338

Query: 133 QIGKMILLNPRLISYSIET--KMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRL 190
               M+   P   +YS ET  K  E++  +    L    MI       P ++GYS+EKR+
Sbjct: 339 DFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMI-------PTVLGYSLEKRI 391

Query: 191 DPTSQFLKSI 200
            P S  +K++
Sbjct: 392 VPRSNVIKAL 401



 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 124/305 (40%), Gaps = 50/305 (16%)

Query: 38  EVVHQEKANEN--WEYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKP 95
           +V  ++K N +     LRS G ++ ++  I+   P++L     + + P ++ LK+ G   
Sbjct: 75  KVTFEDKVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASS 134

Query: 96  HEVASAIAKFPHILSHSVEEKL--------------------CPL---------LAFFQA 126
            EV   ++  P IL    EE +                    CP          ++  + 
Sbjct: 135 SEVIEIVSNVPTILDKKGEESVSLYYDFVKDIMQDGKSLCISCPEGKKGNRIRNISVLRE 194

Query: 127 LGVPEKQIGKMIL--LNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGY 184
           LGVP+K +  +++    P       E  + ++VD   G    K   +  + V   Y M  
Sbjct: 195 LGVPQKLLFSLLISRYQPVCGKEKFEESLKKVVDM--GFDPAKSKFVEALHV--VYEMS- 249

Query: 185 SVEKRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIV 244
             EK ++      K +G +E ++  +   +P  L     K+++     LKKCG  + +I+
Sbjct: 250 --EKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFET-LKKCGLVEEEII 306

Query: 245 DLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDE----VVDYPC---FFRHGLKKKLQL 297
            ++   P  +  S Q  L+    FL   +G   D+    V  YPC   +    L+KK ++
Sbjct: 307 SVLKSRPQCIRSSEQKILDSIEMFL--GLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEV 364

Query: 298 RHKFL 302
             K +
Sbjct: 365 LVKMM 369


>AT1G62150.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22970198-22971589 REVERSE
           LENGTH=463
          Length = 463

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 7/161 (4%)

Query: 40  VHQEKANENWEYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVA 99
           +  ++  EN+   +  G+    +  +  KCP  L    N +I+   E LK  G    EV 
Sbjct: 260 LSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYSEN-RIIQTFEALKRCGLCEDEVL 318

Query: 100 SAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDF 159
           S   K P  L  S E+++   +  F  LG    +   M+   P+ I YS     AE+V  
Sbjct: 319 SVFKKNPLCLRAS-EQQILNSMETFIGLGFSRDEFVMMVKCLPQCIGYS-----AEMVKK 372

Query: 160 LAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQFLKSI 200
                + K     KV+   P ++GYS+EKR  P    +K++
Sbjct: 373 KTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKAL 413


>AT5G07900.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr5:2520188-2521405 FORWARD
           LENGTH=405
          Length = 405

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)

Query: 128 GVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVE 187
           G    QI  ++   P L+  + E+ +   + F   +G++K  ++ + L  DP I+  S+ 
Sbjct: 112 GFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSK-SLLARTLASDPTILTRSLV 170

Query: 188 KRLDPTSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLV 247
            +L P+  FLKS+  +++ +         +   D  K LVPN  Y+ + G  ++ I  L+
Sbjct: 171 NQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLL 230

Query: 248 VGFP 251
             FP
Sbjct: 231 THFP 234



 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/153 (22%), Positives = 74/153 (48%), Gaps = 1/153 (0%)

Query: 63  PSIVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLA 122
           P   +   + L L   E+   ++  L+  G    +++S + K P +L  + E  L P L+
Sbjct: 83  PDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLS 142

Query: 123 FFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIM 182
           FF ++GV +  + + +  +P +++ S+  ++    +FL  + L+ D  I   L +  ++ 
Sbjct: 143 FFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSV-LDSDEKIVAALRRTTWVF 201

Query: 183 GYSVEKRLDPTSQFLKSIGLAEKDLQVVAMNFP 215
                K L P   ++   G+ EK ++++  +FP
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFP 234


>AT1G61970.2 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22904713-22905969 FORWARD
           LENGTH=418
          Length = 418

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 20/311 (6%)

Query: 19  DRGFDDNSIQGMFRKCKRLEVVHQEKA-NENWEYLRSIGIQERKLPSIVSKCPKILALGL 77
             GF  + I  + R   +L +   EK+     ++L+S G    ++  IVS  P+IL    
Sbjct: 93  SHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKG 152

Query: 78  NEKIVPMVECLK-TLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGK 136
           ++ I    + +K TL     E +S   K  H L     E     ++  + LG+P K +  
Sbjct: 153 HKTISVYYDFIKDTL----LEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFS 208

Query: 137 MILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQF 196
           +++ + + +    + K  E +  +  +G   D    K  V+   ++    EK ++     
Sbjct: 209 LLISDSQPVCG--KEKFEETLKKVVEMGF--DPTTSK-FVEALQVIYKMNEKTIEEKVHL 263

Query: 197 LKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIK 256
            KS+G    D+      +P  L     K+L     +L   GF   +   +V  FPP +  
Sbjct: 264 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFL-GLGFSRDEFAKMVKHFPPCIGL 322

Query: 257 SIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQ-------RNLSC 309
           S + +++ + +FLV  M   +  VV  P  F + L+K++  R   +K        RN   
Sbjct: 323 STE-TVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELP 381

Query: 310 SLSEMLDCNEK 320
           S+S +L C ++
Sbjct: 382 SISCVLMCTKQ 392


>AT1G61970.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:22904713-22905969 FORWARD
           LENGTH=418
          Length = 418

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 20/311 (6%)

Query: 19  DRGFDDNSIQGMFRKCKRLEVVHQEKA-NENWEYLRSIGIQERKLPSIVSKCPKILALGL 77
             GF  + I  + R   +L +   EK+     ++L+S G    ++  IVS  P+IL    
Sbjct: 93  SHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKG 152

Query: 78  NEKIVPMVECLK-TLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGK 136
           ++ I    + +K TL     E +S   K  H L     E     ++  + LG+P K +  
Sbjct: 153 HKTISVYYDFIKDTL----LEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFS 208

Query: 137 MILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKVLVKDPYIMGYSVEKRLDPTSQF 196
           +++ + + +    + K  E +  +  +G   D    K  V+   ++    EK ++     
Sbjct: 209 LLISDSQPVCG--KEKFEETLKKVVEMGF--DPTTSK-FVEALQVIYKMNEKTIEEKVHL 263

Query: 197 LKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIK 256
            KS+G    D+      +P  L     K+L     +L   GF   +   +V  FPP +  
Sbjct: 264 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFL-GLGFSRDEFAKMVKHFPPCIGL 322

Query: 257 SIQNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKKKLQLRHKFLKQ-------RNLSC 309
           S + +++ + +FLV  M   +  VV  P  F + L+K++  R   +K        RN   
Sbjct: 323 STE-TVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELP 381

Query: 310 SLSEMLDCNEK 320
           S+S +L C ++
Sbjct: 382 SISCVLMCTKQ 392


>AT1G56380.1 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:21101374-21102701 FORWARD
           LENGTH=388
          Length = 388

 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 52/235 (22%)

Query: 17  FKDRGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKILALG 76
           +K  GFD   +  MF+KC     + ++K  +++E L+  G+ E ++ S+  K P+ +   
Sbjct: 190 YKTLGFDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEEVISMFQKSPQCIDFS 249

Query: 77  LNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGK 136
               I    E LK  G    EV S   ++P                  Q +G  EK+I  
Sbjct: 250 -ELDITQNFEFLKGCGLVEEEVLSMFKRYP------------------QCIGFSEKKI-- 288

Query: 137 MILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKV----LVKDPYIMGYSVEKRLDP 192
              LN      ++ET       FL G G +KD ++  V    +V  P ++ +S+EK + P
Sbjct: 289 ---LN------AVET-------FL-GQGFSKDEVMMMVNREGVVSIPVVLEFSMEKMIVP 331

Query: 193 TSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKK--CGFQDRQIVD 245
               +K   L  K L        + +S   + L+ P+  +L++      D+++VD
Sbjct: 332 RCNVIK--ALTSKRL------LKTEVSSMFSVLICPDEVFLERYVSKHDDQELVD 378


>AT1G56380.2 | Symbols:  | Mitochondrial transcription termination
           factor family protein | chr1:21101327-21102701 FORWARD
           LENGTH=399
          Length = 399

 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 52/235 (22%)

Query: 17  FKDRGFDDNSIQGMFRKCKRLEVVHQEKANENWEYLRSIGIQERKLPSIVSKCPKILALG 76
           +K  GFD   +  MF+KC     + ++K  +++E L+  G+ E ++ S+  K P+ +   
Sbjct: 201 YKTLGFDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEEVISMFQKSPQCIDFS 260

Query: 77  LNEKIVPMVECLKTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGK 136
               I    E LK  G    EV S   ++P                  Q +G  EK+I  
Sbjct: 261 -ELDITQNFEFLKGCGLVEEEVLSMFKRYP------------------QCIGFSEKKI-- 299

Query: 137 MILLNPRLISYSIETKMAEIVDFLAGLGLNKDGMIGKV----LVKDPYIMGYSVEKRLDP 192
              LN      ++ET       FL G G +KD ++  V    +V  P ++ +S+EK + P
Sbjct: 300 ---LN------AVET-------FL-GQGFSKDEVMMMVNREGVVSIPVVLEFSMEKMIVP 342

Query: 193 TSQFLKSIGLAEKDLQVVAMNFPSILSRDVNKLLVPNHAYLKK--CGFQDRQIVD 245
               +K   L  K L        + +S   + L+ P+  +L++      D+++VD
Sbjct: 343 RCNVIK--ALTSKRL------LKTEVSSMFSVLICPDEVFLERYVSKHDDQELVD 389