Miyakogusa Predicted Gene

Lj0g3v0223509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223509.1 Non Chatacterized Hit- tr|D8RUP9|D8RUP9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,48.86,1e-17,seg,NULL,CUFF.14532.1
         (109 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01460.2 | Symbols:  | P-loop containing nucleoside triphosph...   143   2e-35
AT2G01460.1 | Symbols:  | P-loop containing nucleoside triphosph...   143   2e-35

>AT2G01460.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:206136-211765
           FORWARD LENGTH=954
          Length = 954

 Score =  143 bits (361), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/109 (65%), Positives = 85/109 (77%), Gaps = 1/109 (0%)

Query: 2   LKLDGSYTTKSYLEIVLERLPAIERNSGGIHSQQSAKLQEIVEFIQXX-XXXXXXXXXXX 60
           LKLDGSYTTKSYL+IVLERLP ++R+S GIH+QQ+A+LQE+VEFIQ              
Sbjct: 846 LKLDGSYTTKSYLQIVLERLPPVQRSSSGIHTQQAARLQELVEFIQSQGSSNSVSESSPR 905

Query: 61  XXXXPIEGVIEEMQSRIRRLEKWLAINTVLWTFLMSALVGYSLYQRRRQ 109
                I+ V+E+MQSRI+RLE+W  INTVLWTFLMSALVGYSLYQR+RQ
Sbjct: 906 RDGSSIDNVLEDMQSRIKRLERWHTINTVLWTFLMSALVGYSLYQRKRQ 954


>AT2G01460.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:206136-211765
           FORWARD LENGTH=955
          Length = 955

 Score =  143 bits (361), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/109 (65%), Positives = 85/109 (77%), Gaps = 1/109 (0%)

Query: 2   LKLDGSYTTKSYLEIVLERLPAIERNSGGIHSQQSAKLQEIVEFIQXX-XXXXXXXXXXX 60
           LKLDGSYTTKSYL+IVLERLP ++R+S GIH+QQ+A+LQE+VEFIQ              
Sbjct: 847 LKLDGSYTTKSYLQIVLERLPPVQRSSSGIHTQQAARLQELVEFIQSQGSSNSVSESSPR 906

Query: 61  XXXXPIEGVIEEMQSRIRRLEKWLAINTVLWTFLMSALVGYSLYQRRRQ 109
                I+ V+E+MQSRI+RLE+W  INTVLWTFLMSALVGYSLYQR+RQ
Sbjct: 907 RDGSSIDNVLEDMQSRIKRLERWHTINTVLWTFLMSALVGYSLYQRKRQ 955