Miyakogusa Predicted Gene

Lj0g3v0223399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0223399.1 Non Chatacterized Hit- tr|I1M0E1|I1M0E1_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,74.83,0,OXA1,NULL;
OXA1,Membrane insertase OXA1/ALB3/YidC; seg,NULL; yidC_oxa1_cterm:
membrane protein inser,CUFF.14567.1
         (426 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62050.1 | Symbols: OXA1, ATOXA1, OXA1AT | homolog of yeast o...   361   e-100
AT2G46470.1 | Symbols: OXA1L | inner membrane protein OXA1-like ...   301   5e-82
AT3G49150.1 | Symbols:  | F-box/RNI-like superfamily protein | c...    79   5e-15
AT3G44370.1 | Symbols:  | Membrane insertion protein, OxaA/YidC ...    63   4e-10
AT2G46455.1 | Symbols:  | OxaA/YidC-like membrane insertion prot...    55   1e-07

>AT5G62050.1 | Symbols: OXA1, ATOXA1, OXA1AT | homolog of yeast
           oxidase assembly 1 (OXA1) | chr5:24924062-24926758
           REVERSE LENGTH=429
          Length = 429

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/430 (44%), Positives = 257/430 (59%), Gaps = 12/430 (2%)

Query: 1   MAYRRCLLTRGNLINRSCHPSFSYVLHSNEGKQQD--EKPSPTNVGNFIQTRSFGN--YL 56
           MA+R+ L  R  L  R   P +  +   ++ ++    ++ S  +  +F+  RS  N  + 
Sbjct: 1   MAFRQTLSIRSRLFARRNQPVYHIIPRESDHERDSFCQETSQRSYHSFLHQRSVNNSDFS 60

Query: 57  NGSTGFLAAAASPYAGYNLCRYMSTV-NQGSNEIGVMSDVADVLTDATVEGVASQXXXXX 115
             S G L    +P +G+   RYMS+    GS +IGVMSD+A+V+TD+T++ V +Q     
Sbjct: 61  KVSGGSLHLPLAPTSGFAFYRYMSSAPGVGSEKIGVMSDIAEVITDSTLQDVPAQAAAAV 120

Query: 116 XXXX-XXXDSFLPVQILQYVIDAVHSYTGLNWWAAIVLTTLVIRSATAPLLINQLKATSK 174
                   DSF P+  LQ  ID VH++TG  WWA+IV+ T++IRS+T PLLI Q+K T+K
Sbjct: 121 SEVTLAAADSFFPIAALQQCIDMVHTFTGFEWWASIVVATILIRSSTVPLLIKQMKDTTK 180

Query: 175 LTIMRPHLEEIKQQMEGKTGDPEAIAEGQKQMQKLFKKYGVSPFTPLKXXXXXXXXXXXX 234
           L +MRP LE I+++M+ K  D   +AEGQK+M+ LFK+YGV+PFTP+K            
Sbjct: 181 LALMRPRLESIREEMQNKGMDSVTMAEGQKKMKNLFKEYGVTPFTPMKGMFIQGPLFICF 240

Query: 235 XLAISNMAEKMPSFKHGGASWFTDLTTPDTLYILPALTALSFLVTVECNMQEGMEGNPVA 294
            LAI NMAEK+PSF+ GGA WFTDLTTPD+LYILP +T L+FL+TVECN QEGMEGNP+A
Sbjct: 241 FLAIRNMAEKVPSFQTGGALWFTDLTTPDSLYILPVITGLTFLITVECNAQEGMEGNPMA 300

Query: 295 STMKNVSRGIAVLTVPLTMGFPKAIFCYWITSNLFSLSYGLVLKAPGVKKALGVPEXXXX 354
            T+K V R  A+LTVP+TM FP+AIFCYWITSNLFSL YGLV+K P VKK L +P+    
Sbjct: 301 GTVKTVCRVFALLTVPMTMSFPQAIFCYWITSNLFSLMYGLVIKRPQVKKMLRIPDLPPP 360

Query: 355 XXXXXXXXXXXXXXXLKKATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLRSL 414
                            KA T                                 +RL++L
Sbjct: 361 PPGQQPSFDLFSALKKMKAMTQD------HTQNQIEPPSPVNPRLSSTSLSPVSKRLKAL 414

Query: 415 EKQVKGRKKS 424
           E QVKGRKK+
Sbjct: 415 ESQVKGRKKN 424


>AT2G46470.1 | Symbols: OXA1L | inner membrane protein OXA1-like |
           chr2:19072659-19074948 FORWARD LENGTH=431
          Length = 431

 Score =  301 bits (771), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 166/356 (46%), Positives = 228/356 (64%), Gaps = 12/356 (3%)

Query: 5   RCLLTRGNLINRSCHPSFSYVLHSNEGKQQDEKPSPTNVGNFIQTRSFGNYLN---GSTG 61
           R +  R NL+ R  +PS  +++  +  + + +  S   +   +  R+  N L+       
Sbjct: 6   RGITKRVNLLQRRVYPSCGHLIRDD--RDETKSGSSDTMIREVLARNGTNKLSSMFADRH 63

Query: 62  FLAAAASPYA-GYNLCRYMS-TVNQGSNEIGVMSDVA-DVLTDATVEGVASQXXXXX--- 115
           + + A  P   G + CR+MS T  + S+++  +  VA +V+ D  +E V +         
Sbjct: 64  YQSFATGPLGLGLSSCRHMSSTPPEWSDKVDGIDFVATEVVPDEIIEAVTTTSQAVVPAI 123

Query: 116 -XXXXXXXDSFLPVQILQYVIDAVHSYTGLNWWAAIVLTTLVIRSATAPLLINQLKATSK 174
                   DS  PV  LQ++IDAVHS+TGLNWWA+I LTT++IR  T P+L+NQLKAT K
Sbjct: 124 NEVAIAAADSAFPVAALQHLIDAVHSFTGLNWWASIALTTVLIRGVTIPILLNQLKATYK 183

Query: 175 LTIMRPHLEEIKQQMEGKTGDPEAIAEGQKQMQKLFKKYGVSPFTPLKXXXXXXXXXXXX 234
           L ++RP LEE++Q+M  K  DPEA+AEGQ++MQ LFK++GV+PFTPLK            
Sbjct: 184 LNVLRPQLEELRQEMSTKAQDPEAMAEGQRRMQLLFKEHGVTPFTPLKGLIIQGPIFISF 243

Query: 235 XLAISNMAEKMPSFKHGGASWFTDLTTPDTLYILPALTALSFLVTVECNMQEGMEGNPVA 294
             AI NMAEK+PSFK GG  WFTDLTT DT YILP LTA++FL+ VE NMQEG+EGNPVA
Sbjct: 244 FFAIRNMAEKVPSFKTGGTLWFTDLTTTDTTYILPLLTAVTFLIMVESNMQEGLEGNPVA 303

Query: 295 STMKNVSRGIAVLTVPLTMGFPKAIFCYWITSNLFSLSYGLVLKAPGVKKALGVPE 350
            TMK  SR IA L++P+ +G  KA+FCYW+TSNLF+L YGL L+ P V+K L +P+
Sbjct: 304 GTMKKFSRIIAFLSIPVLIGIEKALFCYWLTSNLFTLVYGLTLRRPDVRKLLNLPD 359


>AT3G49150.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr3:18218858-18221877 FORWARD LENGTH=630
          Length = 630

 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 19/186 (10%)

Query: 1   MAYRRCLLTRGNLINRSCH-PSFSYVLHSNEGKQQDEKPSPTNVGNFIQTRSFGNYLNGS 59
           M  RR L  R  L N  C+ PS S ++  ++  +  EKP   + G+F+  RSF + +  S
Sbjct: 450 MDLRRTLSLRS-LFNARCYQPSCSGIIQRDDVHE--EKP---HYGSFLHQRSFSSSMILS 503

Query: 60  TGFLAAAASPYA-----GYNLCRYMSTVN-QGSNEIGVMSDVADVLTDATVEGVASQXXX 113
              +  + S +      G +  R MST +  GS+E G ++ VA+ LTD        Q   
Sbjct: 504 QQHMMRSPSHFPLCSPFGVSTYRPMSTSHISGSDESGDVNHVAETLTDLV------QQDT 557

Query: 114 XXXXXXXXXDSFLPVQILQYVIDAVHSYTGLNWWAAIVLTTLVIRSATAPLLINQLKATS 173
                    DS + +  +Q ++  VHS TGLNWWA+IV TT +IR  T PL+I   +  S
Sbjct: 558 VIEVADAAIDSSIQLDFVQQIVHNVHSLTGLNWWASIVFTTFLIRGVTIPLMIECERWFS 617

Query: 174 KLTIMR 179
           K  +++
Sbjct: 618 KRMVIK 623


>AT3G44370.1 | Symbols:  | Membrane insertion protein, OxaA/YidC
           with tetratricopeptide repeat domain |
           chr3:16030515-16035147 REVERSE LENGTH=566
          Length = 566

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 20/228 (8%)

Query: 134 VIDAVHSYTGLNWWAAIVLTTLVIRSATAPLLINQLKATSKLTIMRPHLEEIKQQMEGKT 193
           ++D+ H  TGL WW  I  +T+  R+A  P+LI Q K T +++   P L           
Sbjct: 126 LLDSYHDITGLPWWVVIATSTVAFRTALLPILILQRKQTKRISQFLPKLP----HFWPPQ 181

Query: 194 GDPEAIAEGQKQMQKLFKKYGVSPFTPLKXXXXXXXXXXXXXL-AISNMA-EKMPSFKHG 251
           G   ++ +  K  +K  K  G   F  +              + +I  M+ +  P F  G
Sbjct: 182 GSGRSVLDQLKLFRKERKDIGCPSFLWVPAYFSIQISCFFLWITSIRRMSLDHHPGFDSG 241

Query: 252 GASWFTDLT-TPDTLY--ILPAL--------TALSFLVTVECNMQEGMEGNPVASTMKNV 300
           GA WF +LT  P+ LY  + P L        T ++F  +    + +  E   +A   K  
Sbjct: 242 GALWFQNLTEIPNGLYGPLFPFLIAGLHYTNTQITFTASSVHKVDKFTE---LAKAYKTF 298

Query: 301 SRGIAVLTVPLTMGFPKAIFCYWITSNLFSLSYGLVLKAPGVKKALGV 348
              +      L+   P+    YW T+  FS++   +L  P V   LG+
Sbjct: 299 LNLLTCALYFLSFQMPQGSLLYWATNLSFSIAQQSILNHPVVSAKLGL 346


>AT2G46455.1 | Symbols:  | OxaA/YidC-like membrane insertion protein
           | chr2:19069844-19070833 REVERSE LENGTH=186
          Length = 186

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 3/110 (2%)

Query: 70  YAGYNLCRYMSTVNQGSNEIGVMSDVADVLTDATVEGVASQXXXXXXXXXXXXDSFLPVQ 129
           ++G +LCR MS+      E+    D    + + +VE + +               F P  
Sbjct: 69  FSGVSLCRQMSS---KPEELCSKIDAFGNVVEESVEAIVTNVATIDECTAITESVFSPEG 125

Query: 130 ILQYVIDAVHSYTGLNWWAAIVLTTLVIRSATAPLLINQLKATSKLTIMR 179
            +QYVI+ +H  TG NWW +IVLT  ++    +P+ +       +L I R
Sbjct: 126 FVQYVINGIHELTGFNWWMSIVLTAFLVTVLMSPVSMRVQNLALELQIRR 175