Miyakogusa Predicted Gene

Lj0g3v0222299.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0222299.1 tr|G7LEB5|G7LEB5_MEDTR Kinase-like protein
OS=Medicago truncatula GN=MTR_8g011370 PE=4
SV=1,50.52,3e-19,BULB_LECTIN,Bulb-type lectin domain;
alpha-D-mannose-specific plant lectins,Bulb-type lectin
domain,gene.g17308.t1.1
         (98 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60900.1 | Symbols: RLK1 | receptor-like protein kinase 1 | c...    78   1e-15

>AT5G60900.1 | Symbols: RLK1 | receptor-like protein kinase 1 |
           chr5:24498467-24501494 REVERSE LENGTH=748
          Length = 748

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)

Query: 10  NKGVSVGVSLTAGNG---TTRWLSPSGDFAFGFYQL-PNELFLLAIWYHRITNETTIWYA 65
           N  V VG SLTA      ++ W SPSGDFAFGF ++ PN+ F L+IW+ +I+++T +W+A
Sbjct: 29  NGSVPVGESLTASESQQISSSWRSPSGDFAFGFRKIQPNDGFTLSIWFDKISDKTIVWHA 88

Query: 66  NGDNP----APKGSRLELNGSQGVVLTSPSGSVLWRS 98
              N      P GS++ L    G+V+  P G  LWR+
Sbjct: 89  QAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRA 125