Miyakogusa Predicted Gene

Lj0g3v0221479.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0221479.1 tr|H6TY31|H6TY31_AEGTA VIVIPAROUS1 protein
OS=Aegilops tauschii PE=4 SV=1,31.4,4e-18,seg,NULL;
coiled-coil,NULL,gene.g17220.t1.1
         (526 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24650.1 | Symbols: ABI3, SIS10 | AP2/B3-like transcriptional...   127   2e-29

>AT3G24650.1 | Symbols: ABI3, SIS10 | AP2/B3-like transcriptional
           factor family protein | chr3:8997911-9000780 FORWARD
           LENGTH=720
          Length = 720

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 197/510 (38%), Gaps = 123/510 (24%)

Query: 9   VGDL--HAGLVDYGAMD--FTDGLTVKEREMWF----------HSDQEEFLAMNDEASMF 54
            GDL    G++   A D    DG+    RE+W           H  Q++ L ++ + S+F
Sbjct: 10  AGDLAEDCGILGGDADDTVLMDGIDEVGREIWLDDHGGDNNHVHGHQDDDLIVHHDPSIF 69

Query: 55  YYEFPPLPDFPCTVXXXXXXXXXXXXXXXXXXXXXXXXXXNLG------AVLESDHE--- 105
           Y + P LPDFPC                            +        A+L SD E   
Sbjct: 70  YGDLPTLPDFPCMSSSSSSSTSPAPVNAIVSSASSSSAASSSTSSAASWAILRSDGEDPT 129

Query: 106 --------------QDAEELIKQLHDPMYASMEISKPTDPSPFVDSIETFGYNDNLFGAH 151
                           A +    +  P+ +S            +D +ETFGY D L  ++
Sbjct: 130 PNQNQYASGNCDDSSGALQSTASMEIPLDSSQGFGCGEGGGDCIDMMETFGYMD-LLDSN 188

Query: 152 GFFDPASIF-QDDEIENPLEEYRQDEXXXXXXXXXXXXXXXXXXXXXXXXNAVVAEHQPQ 210
            FFD ++IF QDD+ +NP                                + VV      
Sbjct: 189 EFFDTSAIFSQDDDTQNP---------------------NLMDQTLERQEDQVVVPMMEN 227

Query: 211 EGAKDKIKIQEEGCLDNELTNVFLEWLKANKDIISPNDLRSVTLKKATIEAAAKSLGRGK 270
               D   +      D++L  VFLEWLK NK+ +S  DLR V +KKATIE+AA+ LG GK
Sbjct: 228 NSGGDMQMMNSSLEQDDDLAAVFLEWLKNNKETVSAEDLRKVKIKKATIESAARRLGGGK 287

Query: 271 EGLKQLLKLVLEWVQESHLQNKKRKKNNTPLNVLSQYQV-PTQ-------------NHNT 316
           E +KQLLKL+LEWVQ +HLQ ++     T L+    +Q  P Q             +   
Sbjct: 288 EAMKQLLKLILEWVQTNHLQRRRTTTTTTNLSYQQSFQQDPFQNPNPNNNNLIPPSDQTC 347

Query: 317 IPASNYLDPSSFRPAL--NPYFCY---PLWIPQPIF------------------GVGPSV 353
              S ++ P   + A   +P F Y   P + PQP F                        
Sbjct: 348 FSPSTWVPPPPQQQAFVSDPGFGYMPAPNYPPQPEFLPLLESPPSWPPPPQSGPMPHQQF 407

Query: 354 FSPPIVGY--VGDPYTKGSSNNINGTHNNVDYNMPKSAYSWPHSHFTAASHQTHGPSGDK 411
             PP   Y   GDP         NG      YNM  + Y +P+        Q       +
Sbjct: 408 PMPPTSQYNQFGDP------TGFNG------YNM--NPYQYPYVPAGQMRDQ-------R 446

Query: 412 LKRSRSLATKEARKKRM---EKYVSHHRHH 438
           L R  S ATKEARKKRM    +++SHH  H
Sbjct: 447 LLRLCSSATKEARKKRMARQRRFLSHHHRH 476