Miyakogusa Predicted Gene
- Lj0g3v0219909.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0219909.1 tr|Q2HS37|Q2HS37_MEDTR Nucleic acid binding NABP
OS=Medicago truncatula GN=MTR_2g097670 PE=4 SV=1,77.63,0,PUM,Pumilio
RNA-binding repeat; PUM_HD,Pumilio RNA-binding repeat; NABP,Nucleic
acid binding NABP; P,CUFF.15248.1
(807 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G29200.1 | Symbols: APUM1, PUM1 | pumilio 1 | chr2:12549483-1... 904 0.0
AT2G29190.2 | Symbols: PUM2 | pumilio 2 | chr2:12544260-12548071... 897 0.0
AT2G29190.1 | Symbols: APUM2, PUM2 | pumilio 2 | chr2:12544260-1... 897 0.0
AT2G29140.1 | Symbols: APUM3, PUM3 | pumilio 3 | chr2:12531392-1... 879 0.0
AT3G10360.1 | Symbols: APUM4, PUM4 | pumilio 4 | chr3:3211276-32... 587 e-167
AT3G20250.1 | Symbols: APUM5, PUM5 | pumilio 5 | chr3:7059098-70... 464 e-130
AT4G25880.1 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 422 e-118
AT4G25880.2 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 405 e-113
AT4G25880.3 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 405 e-113
AT1G22240.1 | Symbols: APUM8, PUM8 | pumilio 8 | chr1:7853084-78... 177 4e-44
AT1G78160.1 | Symbols: APUM7, PUM7 | pumilio 7 | chr1:29407900-2... 171 1e-42
AT5G56510.1 | Symbols: APUM12, PUM12 | pumilio 12 | chr5:2288172... 163 5e-40
AT4G08840.1 | Symbols: APUM11, PUM11 | pumilio 11 | chr4:5631298... 156 6e-38
AT1G35730.1 | Symbols: APUM9, PUM9 | pumilio 9 | chr1:13227324-1... 147 2e-35
AT1G35750.1 | Symbols: APUM10, PUM10 | pumilio 10 | chr1:1325339... 142 1e-33
AT5G43090.1 | Symbols: APUM13, PUM13 | pumilio 13 | chr5:1729593... 87 5e-17
AT5G43110.1 | Symbols: APUM14, PUM14 | pumilio 14 | chr5:1730984... 80 5e-15
AT5G59280.1 | Symbols: APUM16, PUM16 | pumilio 16 | chr5:2391414... 69 1e-11
AT1G35850.1 | Symbols: APUM17, PUM17 | pumilio 17 | chr1:1333051... 69 2e-11
AT5G09610.1 | Symbols: APUM21, PUM21 | pumilio 21 | chr5:2981156... 63 9e-10
AT4G08560.1 | Symbols: APUM15, PUM15 | pumilio 15 | chr4:5450434... 62 2e-09
AT5G60110.1 | Symbols: APUM18, PUM18 | pumilio 18 | chr5:2420195... 55 1e-07
AT1G21620.1 | Symbols: APUM20, PUM20 | pumilio 20 | chr1:7579129... 55 2e-07
AT5G60180.1 | Symbols: APUM19, PUM19 | pumilio 19 | chr5:2423302... 52 2e-06
>AT2G29200.1 | Symbols: APUM1, PUM1 | pumilio 1 |
chr2:12549483-12553185 REVERSE LENGTH=968
Length = 968
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/865 (56%), Positives = 571/865 (66%), Gaps = 137/865 (15%)
Query: 3 GSASAEWXXXXXXXXXXXXXXSKQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVDI 62
G++++EW KQKS A+IFQ DMGH +A SRPASRN FDENVD
Sbjct: 169 GASASEWDANGLIGLPGLGLGGKQKSFADIFQADMGHGHPVAQQPSRPASRNTFDENVD- 227
Query: 63 MTSAEADLADLCRDSSATDALRSGTNLQGSSATQNNGTQSSYTYAAALGSPLSRSTTPDP 122
S NL SA+Q G S Y+YAA LGS LSR+ TPDP
Sbjct: 228 ----------------------SNNNLS-PSASQGIGAPSPYSYAAVLGSSLSRNGTPDP 264
Query: 123 QHVARAPSPCLTPIGGGRVAAAEKRGMANPDAYN-VSTGLNGSADIVDALSGMNLSADDV 181
Q +AR PSPCLTPIG GR+++ +KR +N +N V++GLN S+D+V+ALSG+NLS
Sbjct: 265 QAIARVPSPCLTPIGSGRMSSNDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSCSVG 324
Query: 182 LDGDNHFPSQVESDVDNHRRYLFGLQGGQDHGKQHAYLKKSESGHMQKTAYSGSGRSGGN 241
LD SQ E DV+ R Y+FGLQGG + QH + KS+ H
Sbjct: 325 LDDR----SQAEQDVEKVRNYMFGLQGGHNEVNQHEFPNKSDQAH--------------- 365
Query: 242 GPDINNSLDRQIELQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFTN---- 297
K+ S NS +G S +NGG G+ YQ LD N N
Sbjct: 366 ---------------KATGSLRNSQLRGPHGSAYNGGVGLANPYQQLDSPNYCLNNYALN 410
Query: 298 ---------------YLPL--------------------------------SHGRMGNQI 310
+ P+ + GR N++
Sbjct: 411 PAVASMMANQLGNNNFAPMYDNVSALGFSGMDSRHHGRGFVSSGQNLSESRNLGRFSNRM 470
Query: 311 SGGA--LQAPFVDPMYLQYMRASEYGSPQLAALNDPSVDRNYLG-NSYMNLLELQKAYLG 367
GG LQ+ VDPMY QY + L LNDPS+DRN++G +SYM++LELQ+AYLG
Sbjct: 471 MGGGAGLQSHMVDPMYNQYADS-------LDLLNDPSMDRNFMGGSSYMDMLELQRAYLG 523
Query: 368 NLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANX-XXXXXXXXXXXIR 426
KSQY VP KSG N H YYG+P +G +SYPGSP+A+ +R
Sbjct: 524 ----AQKSQYGVPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMR 577
Query: 427 HNDLNMHFASGMRNVAG-VMGPWHLDSGNMDESFASSLLEEFKSNKTKCFELSEISGHVV 485
+++NM F S RN +G +MG WH+D+ + DE F SS+LEEFKSNKT+ FELSEI+GHVV
Sbjct: 578 RDEVNMRFPSATRNYSGGLMGSWHMDA-SFDEGFGSSMLEEFKSNKTRGFELSEIAGHVV 636
Query: 486 EFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQR 545
EFS+DQYGSRFIQQKLETATT+EK MVY+EIMP AL LMTDVFGNYV+QKFFEHGL QR
Sbjct: 637 EFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPPQR 696
Query: 546 RELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVI 605
RELA KLF HVL LSLQMYGCRVIQKAIEVVDLDQKI MV+ELDG++MRCVRDQNGNHV+
Sbjct: 697 RELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVV 756
Query: 606 QKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAV 665
QKCIECVPE+ I+FI+STFF VVTLSTHPYGCRVIQRVLEHC DP+TQ KVM+EIL V
Sbjct: 757 QKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTV 816
Query: 666 SMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAF----- 720
SMLAQDQYGNYVVQHVLEHGKP ER+ IIKELAG IVQMSQQKFASNVVEKCL F
Sbjct: 817 SMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEE 876
Query: 721 ---LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKY 777
LVNEMLG+TDENEPLQAMMKDQFANYVVQKVLETCDD QRELIL+RIKVHL ALKKY
Sbjct: 877 RELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKY 936
Query: 778 TYGKHIVARVEKLVAAGERRIAAQS 802
TYGKH+VAR+EKLVAAGERR+A QS
Sbjct: 937 TYGKHVVARIEKLVAAGERRMALQS 961
>AT2G29190.2 | Symbols: PUM2 | pumilio 2 | chr2:12544260-12548071
REVERSE LENGTH=972
Length = 972
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/865 (56%), Positives = 565/865 (65%), Gaps = 143/865 (16%)
Query: 4 SASAEWXXXXXXXXXXXXXXSKQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVDIM 63
++S+EW KQKS A+IFQ DMGH + SRPASRN FDENVD
Sbjct: 178 ASSSEWDANGLIGLPGLGIGGKQKSFADIFQADMGHGHPVTKQPSRPASRNTFDENVD-- 235
Query: 64 TSAEADLADLCRDSSATDALRSGTNLQGSSATQNNGTQSSYTYAAALGSPLSRSTTPDPQ 123
S NL SA+Q G S Y+YAA LGS LSR+ TPDPQ
Sbjct: 236 ---------------------SKNNL-SPSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQ 273
Query: 124 HVARAPSPCLTPIGGGRVAAAEKRGMANPDAYNVSTGLNGSADIVDALSGMNLSADDVLD 183
+AR PSPCLTPIG GRV++ +KR +N +N GLN S+D+V+ALSGMNLS LD
Sbjct: 274 AIARVPSPCLTPIGSGRVSSNDKRNTSNQSPFN--GGLNESSDLVNALSGMNLSGSGGLD 331
Query: 184 GDNHFPSQVESDVDNHRRYLFGLQGGQDHGKQHAYLKKSESGHMQKTAYSGSGRSGGNGP 243
Q E DV+ R Y+FGLQGG + QH + KS+
Sbjct: 332 ER----GQAEQDVEKVRNYMFGLQGGHNEVNQHGFPNKSD-------------------- 367
Query: 244 DINNSLDRQIELQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFT------- 296
+ QK+ NS +G+ S +N GGG+ QYQ LD N
Sbjct: 368 ----------QAQKATGLLRNSQLRGAQGSTYNDGGGVATQYQHLDSPNYCLNNYGLNPA 417
Query: 297 ------------NYLPLSH-----------------------------------GRMGNQ 309
NY P+ GR N+
Sbjct: 418 VASMMANQLGTNNYSPVYENASAASAMGFSGMDSRLHGGGYVSSGQNLSESRNLGRFSNR 477
Query: 310 ISGGA--LQAPFVDPMYLQYMRASEYGSPQLAALNDPSVDRNYLGNSYMNLLELQKAYLG 367
+ GG LQ+ DPMY QY + L LNDPS+D N++GNSYMN+LELQ+AYLG
Sbjct: 478 MMGGGTGLQSHMADPMYHQYADS-------LDLLNDPSMDVNFMGNSYMNMLELQRAYLG 530
Query: 368 NLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXXXXXXXXX-XXIR 426
KSQY VP KSG N H YG+P +G SYPGSP+A+ +R
Sbjct: 531 ----AQKSQYGVPY--KSGSPNSHTDYGSPTFG---SYPGSPLAHHLLPNSLVSPCSPMR 581
Query: 427 HNDLNMHFASGMRNVAG-VMGPWHLDSGNMDESFASSLLEEFKSNKTKCFELSEISGHVV 485
++NM + S RN AG VMG WH+D+ ++DE F SS+LEEFKSNKT+ FEL+EI+GHVV
Sbjct: 582 RGEVNMRYPSATRNYAGGVMGSWHMDA-SLDEGFGSSMLEEFKSNKTRGFELAEIAGHVV 640
Query: 486 EFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQR 545
EFS+DQYGSRFIQQKLETAT++EK MVY+EIMPHALALMTDVFGNYV+QKFFEHGL QR
Sbjct: 641 EFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPPQR 700
Query: 546 RELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVI 605
RELA+KLF +VL LSLQMYGCRVIQKAIEVVDLDQKI MV+ELDG++MRCVRDQNGNHV+
Sbjct: 701 RELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVV 760
Query: 606 QKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAV 665
QKCIECVPE+ I+FI+STFF VVTLSTHPYGCRVIQRVLEHC DP+TQ KVMDEI+ +
Sbjct: 761 QKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTI 820
Query: 666 SMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLA------ 719
SMLAQDQYGNYV+QHVLEHGKP ER+ IIKELAG IVQMSQQKFASNVVEKCL
Sbjct: 821 SMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEE 880
Query: 720 --FLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKY 777
FLVNEMLG+TDENEPLQAMMKDQFANYVVQKVLETCDD QRELIL RIKVHLNALKKY
Sbjct: 881 REFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKY 940
Query: 778 TYGKHIVARVEKLVAAGERRIAAQS 802
TYGKHIVARVEKLVAAGERR+A QS
Sbjct: 941 TYGKHIVARVEKLVAAGERRMALQS 965
>AT2G29190.1 | Symbols: APUM2, PUM2 | pumilio 2 |
chr2:12544260-12548071 REVERSE LENGTH=972
Length = 972
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/865 (56%), Positives = 565/865 (65%), Gaps = 143/865 (16%)
Query: 4 SASAEWXXXXXXXXXXXXXXSKQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVDIM 63
++S+EW KQKS A+IFQ DMGH + SRPASRN FDENVD
Sbjct: 178 ASSSEWDANGLIGLPGLGIGGKQKSFADIFQADMGHGHPVTKQPSRPASRNTFDENVD-- 235
Query: 64 TSAEADLADLCRDSSATDALRSGTNLQGSSATQNNGTQSSYTYAAALGSPLSRSTTPDPQ 123
S NL SA+Q G S Y+YAA LGS LSR+ TPDPQ
Sbjct: 236 ---------------------SKNNL-SPSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQ 273
Query: 124 HVARAPSPCLTPIGGGRVAAAEKRGMANPDAYNVSTGLNGSADIVDALSGMNLSADDVLD 183
+AR PSPCLTPIG GRV++ +KR +N +N GLN S+D+V+ALSGMNLS LD
Sbjct: 274 AIARVPSPCLTPIGSGRVSSNDKRNTSNQSPFN--GGLNESSDLVNALSGMNLSGSGGLD 331
Query: 184 GDNHFPSQVESDVDNHRRYLFGLQGGQDHGKQHAYLKKSESGHMQKTAYSGSGRSGGNGP 243
Q E DV+ R Y+FGLQGG + QH + KS+
Sbjct: 332 ER----GQAEQDVEKVRNYMFGLQGGHNEVNQHGFPNKSD-------------------- 367
Query: 244 DINNSLDRQIELQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNSSFT------- 296
+ QK+ NS +G+ S +N GGG+ QYQ LD N
Sbjct: 368 ----------QAQKATGLLRNSQLRGAQGSTYNDGGGVATQYQHLDSPNYCLNNYGLNPA 417
Query: 297 ------------NYLPLSH-----------------------------------GRMGNQ 309
NY P+ GR N+
Sbjct: 418 VASMMANQLGTNNYSPVYENASAASAMGFSGMDSRLHGGGYVSSGQNLSESRNLGRFSNR 477
Query: 310 ISGGA--LQAPFVDPMYLQYMRASEYGSPQLAALNDPSVDRNYLGNSYMNLLELQKAYLG 367
+ GG LQ+ DPMY QY + L LNDPS+D N++GNSYMN+LELQ+AYLG
Sbjct: 478 MMGGGTGLQSHMADPMYHQYADS-------LDLLNDPSMDVNFMGNSYMNMLELQRAYLG 530
Query: 368 NLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXXXXXXXXX-XXIR 426
KSQY VP KSG N H YG+P +G SYPGSP+A+ +R
Sbjct: 531 ----AQKSQYGVPY--KSGSPNSHTDYGSPTFG---SYPGSPLAHHLLPNSLVSPCSPMR 581
Query: 427 HNDLNMHFASGMRNVAG-VMGPWHLDSGNMDESFASSLLEEFKSNKTKCFELSEISGHVV 485
++NM + S RN AG VMG WH+D+ ++DE F SS+LEEFKSNKT+ FEL+EI+GHVV
Sbjct: 582 RGEVNMRYPSATRNYAGGVMGSWHMDA-SLDEGFGSSMLEEFKSNKTRGFELAEIAGHVV 640
Query: 486 EFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQR 545
EFS+DQYGSRFIQQKLETAT++EK MVY+EIMPHALALMTDVFGNYV+QKFFEHGL QR
Sbjct: 641 EFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPPQR 700
Query: 546 RELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVI 605
RELA+KLF +VL LSLQMYGCRVIQKAIEVVDLDQKI MV+ELDG++MRCVRDQNGNHV+
Sbjct: 701 RELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVV 760
Query: 606 QKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAV 665
QKCIECVPE+ I+FI+STFF VVTLSTHPYGCRVIQRVLEHC DP+TQ KVMDEI+ +
Sbjct: 761 QKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTI 820
Query: 666 SMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLA------ 719
SMLAQDQYGNYV+QHVLEHGKP ER+ IIKELAG IVQMSQQKFASNVVEKCL
Sbjct: 821 SMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEE 880
Query: 720 --FLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKY 777
FLVNEMLG+TDENEPLQAMMKDQFANYVVQKVLETCDD QRELIL RIKVHLNALKKY
Sbjct: 881 REFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKY 940
Query: 778 TYGKHIVARVEKLVAAGERRIAAQS 802
TYGKHIVARVEKLVAAGERR+A QS
Sbjct: 941 TYGKHIVARVEKLVAAGERRMALQS 965
>AT2G29140.1 | Symbols: APUM3, PUM3 | pumilio 3 |
chr2:12531392-12535060 FORWARD LENGTH=964
Length = 964
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/834 (58%), Positives = 567/834 (67%), Gaps = 73/834 (8%)
Query: 3 GSASAEWXXXXXXXXXXXXXXSKQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVDI 62
G++++EW KQKS A+IFQ DMGH + SRPASRN FDENVD
Sbjct: 170 GASASEWDANGLIGLGLG---GKQKSFADIFQADMGH--PVVQQPSRPASRNTFDENVD- 223
Query: 63 MTSAEADLADLCRDSSATDALRSGTNLQGSSATQNNGTQSSYTYAAALGSPLSRSTTPDP 122
S NL SA+Q G S Y YAA LGS LSR+ TPDP
Sbjct: 224 ----------------------SNNNLS-PSASQGIGAPSPYCYAAVLGSSLSRNGTPDP 260
Query: 123 QHVARAPSPCLTPIGGGRVAAAEKRGMANPDAYN-VSTGLNGSADIVDALSGMNLSADDV 181
Q +AR PSPCLTPIG GRV++ +KR +N +N V++GLN S+D+V+ALSG+NLS
Sbjct: 261 QGIARVPSPCLTPIGSGRVSSNDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSGTGG 320
Query: 182 LDGDNHFPSQVESDVDNHRRYLFGLQGGQDHGKQHAYLKKSESG-------HMQKTAYSG 234
LD Q E DV+ R Y+FGLQ G + H + +S+ + Q G
Sbjct: 321 LDER----GQAEQDVEKVRNYMFGLQDGHNEVNPHGFPNRSDQARGTASCRNSQMRGSQG 376
Query: 235 SGRSGGNG---PDINNSLDRQIELQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLD-- 289
S + G+G P ++ L + S + + SP Y +D
Sbjct: 377 SAYNSGSGVANPYQHHDSPNYYALNPAVASMMANQLGTNNYSPMYENASATLGYSAMDSR 436
Query: 290 ---GTNSSFTNYLPLSH--GRMGNQISGGALQAP--FVDPMYLQYMRASEYGSPQLAALN 342
G+ S L S GR+GN++ G P DPMY QY R SE + LN
Sbjct: 437 LHGGSFVSSGQNLSESRNIGRVGNRMMEGGTGHPSHLADPMYHQYARFSE-NADSFDLLN 495
Query: 343 DPSVDRNYLGNSYMNLLELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVG 402
DPS+DRNY GNSYMN+LE+Q+AYLG+ KSQY +P KSG N H YYG+P +G
Sbjct: 496 DPSMDRNY-GNSYMNMLEIQRAYLGS----QKSQYGLPY--KSGSPNSHSYYGSPTFGSN 548
Query: 403 LSYPGSPMANX-XXXXXXXXXXXIRHNDLNMHFASGMRN-VAGVMGPWHLDSGNMDESFA 460
+SYPGSP+A+ +R ++NM + + RN GVMG WH+D+ ++DE F
Sbjct: 549 MSYPGSPLAHHGMPNSLMSPYSPMRRGEVNMRYPAATRNYTGGVMGSWHMDA-SLDEGFG 607
Query: 461 SSLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHA 520
SS+LEEFKSNKT+ FELSEI+GHVVEFS+DQYGSRFIQQKLETATT+EK MVY+EIMP A
Sbjct: 608 SSMLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKA 667
Query: 521 LALMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQ 580
LALMTDVFGNYV+QKFFEHGL QRREL KL +VL LSLQMYGCRVIQKAIEVVDLDQ
Sbjct: 668 LALMTDVFGNYVIQKFFEHGLPPQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQ 727
Query: 581 KINMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRV 640
KI MV+ELDG++MRCVRDQNGNHV+QKCIECVPE+ I+FI+STFF VVTLSTHPYGCRV
Sbjct: 728 KIQMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRV 787
Query: 641 IQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGN 700
IQRVLEHC +P+TQ KVM+EIL VSML QDQYGNYVVQHVLEHGKP ER+ IIKELAG
Sbjct: 788 IQRVLEHCHNPDTQSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGK 847
Query: 701 IVQMSQQKFASNVVEKCLAF--------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVL 752
IVQMSQQKFASNVVEKCL F LVNEMLG+TDENEPLQAMMKDQFANYVVQKVL
Sbjct: 848 IVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 907
Query: 753 ETCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQS-PHP 805
ETCDD QRELIL+RIKVHLNALKKYTYGKHIVARVEKLVAAGERR+A QS P P
Sbjct: 908 ETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSLPQP 961
>AT3G10360.1 | Symbols: APUM4, PUM4 | pumilio 4 |
chr3:3211276-3215144 REVERSE LENGTH=1003
Length = 1003
Score = 587 bits (1513), Expect = e-167, Method: Compositional matrix adjust.
Identities = 365/834 (43%), Positives = 483/834 (57%), Gaps = 116/834 (13%)
Query: 25 KQKSLAEIFQDDMGHKTTIAGFHSRPASRNAFDENVD--IMTSAEA---DLADLCRDSSA 79
++KS A+I Q+ + + SRPAS N F + D ++++ A D DS
Sbjct: 222 RRKSFADILQEGLERDAALGSQLSRPASCNTFRDMKDAAVLSNFSAGGFDSPLAFHDSLH 281
Query: 80 TDALRSGTNLQGSSATQNNGTQSSYTYAAALGSPLSRSTTPDPQHVARAPSPCLTPIGGG 139
+ A S + GS+ + SP+ R+ TPD V R+ + L PIG
Sbjct: 282 STAKNSPNTMLGST----------------MSSPVPRNRTPDSHLVGRSTASGLPPIGT- 324
Query: 140 RVAAAEKR-----GMANPDAYNVSTGLNGSADIVDALSGMNLSADDVLDGDNHFPSQVES 194
RV EK+ + N ++Y +AD+ D LS +N+S + +NH SQ++
Sbjct: 325 RVGPVEKKNTFGTAIQNCESYT-------AADVADTLSRLNMSEMSQVK-ENHMQSQLQV 376
Query: 195 DVDNHRRYLFGLQGG-------QDHGKQHAYLKKSESGHMQKTAYSGSGRSGGNGPDIN- 246
+++N + + G Q+ + +L + G M S + G+ +N
Sbjct: 377 ELENQSDVMRYIPNGHKKALRQQNTAETKDHLFSANYGGMSGYGASLGASTVGSHGQVNI 436
Query: 247 -------------NSLDRQIELQKSAVSPNNSYFKGSPTSPFNGGGGMPAQYQPLDGTNS 293
+ R + S V+ N G+ F+ GG Y + NS
Sbjct: 437 PKRTSSSASLYSTSDHSRLGSVGLSDVNIRNGNINGTD---FSTAGG----YMAKNKLNS 489
Query: 294 SFTNYLP-----------LSHGRMGNQISGGALQAPFVDPMYLQYMRASEYGSPQLAALN 342
+Y S R+ NQ++ L +P +DP Y QY+ + + AA
Sbjct: 490 LAEHYSAEGSHLTGDGDRQSLNRLINQVAS-ELHSPVMDPHYSQYL----HTASSTAAPI 544
Query: 343 DPSVDRNYLGNSYMNLLELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVG 402
D S+ RN G S + YL LL+ ++ Q LG + ++ ++ +P+Y +G
Sbjct: 545 DHSLIRNNFGTSNG---DTANEYLAMLLAQNRQQ----LGNLNAANSR--FFESPSYDLG 595
Query: 403 LSYPG----SPMANXXXXXXXXXXXXIRHNDLNMHFASGMRNV--AGVMGPWHLDSGNMD 456
Y G SP N ++ M ++ M V G+ G H+D G+
Sbjct: 596 NMYLGNHLPSPSKNSRN-----------FQNMRMSQSASMMKVPFGGLQGSSHVDIGSTA 644
Query: 457 ESFASSLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEI 516
E+ SLLE FK+NKT+ ELSEI GHV+EFS DQYGSRFIQQKLETAT EEK ++ EI
Sbjct: 645 EA---SLLEGFKNNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEI 701
Query: 517 MPHALALMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVV 576
+P+ LMTDVFGNYV+QKFFEHG QR+ELA ++ HVL LSLQMYGCRVIQKA+EVV
Sbjct: 702 LPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVV 761
Query: 577 DLDQKINMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPY 636
+L+Q+ MV+ELDG++M+CV DQNGNHVIQKCIE +P+D I FI+S+F+ +V+ LSTHPY
Sbjct: 762 ELEQQARMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPY 821
Query: 637 GCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKE 696
GCRVIQRVLEH D TQ+ +M+EI+ +V LAQDQYGNYV+QH+++HGKPHERS II +
Sbjct: 822 GCRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINK 881
Query: 697 LAGNIVQMSQQKFASNVVEKCLAF--------LVNEMLGSTDENEPLQAMMKDQFANYVV 748
LAG IV+MSQQKFASNVVEKCL F LVNEMLG TDENEPLQAMMKD F NYVV
Sbjct: 882 LAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVV 941
Query: 749 QKVLETCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQS 802
QKVLETCDD LILSRIKVHLNALK+YTYGKHIVARVEKL+ GERRI S
Sbjct: 942 QKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIGLSS 995
>AT3G20250.1 | Symbols: APUM5, PUM5 | pumilio 5 |
chr3:7059098-7062660 REVERSE LENGTH=961
Length = 961
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/491 (49%), Positives = 309/491 (62%), Gaps = 32/491 (6%)
Query: 319 FVDPMYLQYMRASEYGS--PQLAALNDPSVDRNYLGNSYMNLLELQKAYLGNLLSPHKSQ 376
VDP LQY + ++ + P + D ++ YM E L + LSP
Sbjct: 470 LVDPFQLQYFQQAQVDAYAPPFQSSTDSFGQKDQQAVGYMANHEP----LNSPLSP---- 521
Query: 377 YNVPLGGKSGGSNHHGYYGN--PAYGVGLSYPGSPMANXXXXXXXXXXXXI---RHNDLN 431
G H G Y P V YPGSP+A+ R ++
Sbjct: 522 -----GYGLQSPRHMGNYFAVPPGVRVMPQYPGSPLASPVMPSSPVGGMMSHFGRRSETR 576
Query: 432 MHFASGMRNVAGVMGPWHLDSGN----MDESFASSLLEEFKSNKTKCFELSEISGHVVEF 487
H RN G W + G +D+ S L+E KS + ELS+I+G VVEF
Sbjct: 577 YHQQGPSRNTGIYPGGWQGNRGGASSIVDDLKRHSFLDELKSPNARKLELSDIAGRVVEF 636
Query: 488 SADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRE 547
S DQ+GSRFIQQKLE + EEK V+ E++P A LMTDVFGNYV+QKF EHG +QR E
Sbjct: 637 SVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREE 696
Query: 548 LANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVIQK 607
L +L +++LSLQMYGCRVIQKA+EV+D+DQK +++ELDGN+++CVRDQNGNHVIQK
Sbjct: 697 LVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVIQK 756
Query: 608 CIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSM 667
CIE +P I F+++ F QV TLSTHPYGCRVIQR+LEHC D ++DEIL +
Sbjct: 757 CIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFA 816
Query: 668 LAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCL--------A 719
LA DQYGNYV QHVLE GKP ER II++L GN+VQMSQ K+ASNVVEKCL
Sbjct: 817 LAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTERE 876
Query: 720 FLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKYTY 779
FL+ E++G ++E+ L AMMKDQFANYVVQKVLE D QRE+++ R+K+HL +L+KYTY
Sbjct: 877 FLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQREILVQRMKIHLQSLRKYTY 936
Query: 780 GKHIVARVEKL 790
GKHIVAR E+L
Sbjct: 937 GKHIVARFEQL 947
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 4/246 (1%)
Query: 556 VLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVIQKCIECVPED 615
V+ S+ +G R IQ+ +E ++K ++ E+ + + D GN+VIQK IE
Sbjct: 633 VVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPA 692
Query: 616 AIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGN 675
+ +V Q+V+LS YGCRVIQ+ LE D + + +++ E+ G V +DQ GN
Sbjct: 693 QREELVKQLAGQMVSLSLQMYGCRVIQKALE-VIDVDQKTELIRELDGNVLKCVRDQNGN 751
Query: 676 YVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAFLVNEMLGSTDENEPL 735
+V+Q +E +I G + +S + V+++ L ++ +E L
Sbjct: 752 HVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEIL 811
Query: 736 Q---AMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEKLVA 792
+ A+ DQ+ NYV Q VLE +R I+ ++ ++ + ++ Y ++V + +
Sbjct: 812 ESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHAD 871
Query: 793 AGERRI 798
+ ER
Sbjct: 872 STEREF 877
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 44/218 (20%)
Query: 621 VSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQH 680
+S +VV S +G R IQ+ LEHC D + V E+L S L D +GNYV+Q
Sbjct: 626 LSDIAGRVVEFSVDQHGSRFIQQKLEHCSD-EEKASVFSEVLPQASKLMTDVFGNYVIQK 684
Query: 681 VLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKCLAFL----VNEMLGSTDENEPLQ 736
+EHG P +R ++K+LAG +V +S Q + V++K L + E++ D N +
Sbjct: 685 FIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGN--VL 742
Query: 737 AMMKDQFANYVVQK------------------------------------VLETC-DDHQ 759
++DQ N+V+QK +LE C DD +
Sbjct: 743 KCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEE 802
Query: 760 RELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERR 797
I+ I AL YG ++ V + ERR
Sbjct: 803 THCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERR 840
>AT4G25880.1 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159078 FORWARD LENGTH=861
Length = 861
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 193/336 (57%), Positives = 256/336 (76%), Gaps = 8/336 (2%)
Query: 462 SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHAL 521
+ LEE KS K + F+LS+I+GH+VEFSADQ+GSRFIQQKLE EEK V++EI+PHA
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHAC 574
Query: 522 ALMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQK 581
LMTDVFGNYV+QKFFE+G ++QR+ELA++L ++ LSLQMYGCRVIQKA++V++ DQ+
Sbjct: 575 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 634
Query: 582 INMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVI 641
+ + +ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 635 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 694
Query: 642 QRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNI 701
QR+LE C + + + +EIL +V +L++DQYGNYV QHVLE G ER I ++L+G+I
Sbjct: 695 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 754
Query: 702 VQMSQQKFASNVVEKCLAF--------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLE 753
VQ+S KFASNV+EKCL + ++ E+ G + L MMKDQ+ NYVVQK+ E
Sbjct: 755 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFE 814
Query: 754 TCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEK 789
TC QR + SR+++H +ALKKYTYGKHIV+R+E+
Sbjct: 815 TCTADQRLTLFSRVRMHASALKKYTYGKHIVSRLEQ 850
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 585 VQELDGNIMRCVRDQNGNHVIQKCIE-CVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQR 643
+ ++ G+I+ DQ+G+ IQ+ +E C PE+ + L T +G VIQ+
Sbjct: 530 LSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAA-VFREILPHACKLMTDVFGNYVIQK 588
Query: 644 VLEHCKDPNTQQK-VMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIV 702
E+ +TQ+K + D+++G + L+ YG V+Q L+ +P +R + +EL G ++
Sbjct: 589 FFEYGN--STQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVM 646
Query: 703 QMSQQKFASNVVEKCL--------AFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLET 754
+ + + ++V++KC+ F++ G + ++ + V+Q++LE
Sbjct: 647 RCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQ------VSSLSMHPYGCRVIQRLLER 700
Query: 755 CD-DHQRELILSRIKVHLNALKKYTYGKHIVARV-EKLVAAGERRIA 799
C DHQ I I + L K YG ++ V EK + RI
Sbjct: 701 CSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIG 747
>AT4G25880.2 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159078 FORWARD LENGTH=855
Length = 855
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/336 (55%), Positives = 250/336 (74%), Gaps = 14/336 (4%)
Query: 462 SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHAL 521
+ LEE KS K + F+LS+I+GH+VEFS RFIQQKLE EEK V++EI+PHA
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEFS------RFIQQKLENCKPEEKAAVFREILPHAC 568
Query: 522 ALMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQK 581
LMTDVFGNYV+QKFFE+G ++QR+ELA++L ++ LSLQMYGCRVIQKA++V++ DQ+
Sbjct: 569 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 628
Query: 582 INMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVI 641
+ + +ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 629 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 688
Query: 642 QRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNI 701
QR+LE C + + + +EIL +V +L++DQYGNYV QHVLE G ER I ++L+G+I
Sbjct: 689 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 748
Query: 702 VQMSQQKFASNVVEKCLAF--------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLE 753
VQ+S KFASNV+EKCL + ++ E+ G + L MMKDQ+ NYVVQK+ E
Sbjct: 749 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFE 808
Query: 754 TCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEK 789
TC QR + SR+++H +ALKKYTYGKHIV+R+E+
Sbjct: 809 TCTADQRLTLFSRVRMHASALKKYTYGKHIVSRLEQ 844
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 41/201 (20%)
Query: 639 RVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELA 698
R IQ+ LE+CK P + V EIL L D +GNYV+Q E+G +R + +L
Sbjct: 542 RFIQQKLENCK-PEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLM 600
Query: 699 GNIVQMSQQKFASNVVEKCLAFLV------------------------NEMLGSTDENEP 734
G IV +S Q + V++K L + N ++ EN P
Sbjct: 601 GQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIP 660
Query: 735 --------------LQAMMKDQFANYVVQKVLETCD-DHQRELILSRIKVHLNALKKYTY 779
+ ++ + V+Q++LE C DHQ I I + L K Y
Sbjct: 661 ADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVCVLSKDQY 720
Query: 780 GKHIVARV-EKLVAAGERRIA 799
G ++ V EK + RI
Sbjct: 721 GNYVTQHVLEKGTSEERERIG 741
>AT4G25880.3 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159070 FORWARD LENGTH=858
Length = 858
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/341 (55%), Positives = 251/341 (73%), Gaps = 14/341 (4%)
Query: 462 SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHAL 521
+ LEE KS K + F+LS+I+GH+VEFS RFIQQKLE EEK V++EI+PHA
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEFS------RFIQQKLENCKPEEKAAVFREILPHAC 568
Query: 522 ALMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQK 581
LMTDVFGNYV+QKFFE+G ++QR+ELA++L ++ LSLQMYGCRVIQKA++V++ DQ+
Sbjct: 569 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 628
Query: 582 INMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVI 641
+ + +ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 629 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 688
Query: 642 QRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNI 701
QR+LE C + + + +EIL +V +L++DQYGNYV QHVLE G ER I ++L+G+I
Sbjct: 689 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 748
Query: 702 VQMSQQKFASNVVEKCLAF--------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLE 753
VQ+S KFASNV+EKCL + ++ E+ G + L MMKDQ+ NYVVQK+ E
Sbjct: 749 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFE 808
Query: 754 TCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAG 794
TC QR + SR+++H +ALKKYTYGKHIV+R+E+ G
Sbjct: 809 TCTADQRLTLFSRVRMHASALKKYTYGKHIVSRLEQPSIEG 849
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 41/201 (20%)
Query: 639 RVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELA 698
R IQ+ LE+CK P + V EIL L D +GNYV+Q E+G +R + +L
Sbjct: 542 RFIQQKLENCK-PEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLM 600
Query: 699 GNIVQMSQQKFASNVVEKCLAFLV------------------------NEMLGSTDENEP 734
G IV +S Q + V++K L + N ++ EN P
Sbjct: 601 GQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIP 660
Query: 735 --------------LQAMMKDQFANYVVQKVLETCD-DHQRELILSRIKVHLNALKKYTY 779
+ ++ + V+Q++LE C DHQ I I + L K Y
Sbjct: 661 ADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVCVLSKDQY 720
Query: 780 GKHIVARV-EKLVAAGERRIA 799
G ++ V EK + RI
Sbjct: 721 GNYVTQHVLEKGTSEERERIG 741
>AT1G22240.1 | Symbols: APUM8, PUM8 | pumilio 8 |
chr1:7853084-7854963 FORWARD LENGTH=515
Length = 515
Score = 177 bits (448), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 178/322 (55%), Gaps = 17/322 (5%)
Query: 476 ELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQK 535
++SE G+V + DQ+G RF+Q E + + +++ E++PH + LM D FGNY++QK
Sbjct: 195 KVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQK 254
Query: 536 FFEHGLASQRRELANKLFS---HVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQE-LDGN 591
+ QR ++ + S ++ +SL YG RV+Q+ +E + ++I++V+ L
Sbjct: 255 LLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPG 314
Query: 592 IMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDP 651
+ +RD NGNHVIQ+C++C+ + +FI + ++TH +GC V+Q+ + +
Sbjct: 315 FLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGL 374
Query: 652 NTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFAS 711
++K++ EI LAQD YGNY VQ VLE +A++ +L G+ V++S QKF+S
Sbjct: 375 Q-REKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSS 433
Query: 712 NVVEKCLAF-------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELIL 764
++VE+CL +V E++ +++D +AN+V+Q L ++
Sbjct: 434 HMVERCLTHCPESRPQIVRELISVPH----FDILIQDPYANFVIQAALAVTKGSLHATLV 489
Query: 765 SRIKVHLNALKKYTYGKHIVAR 786
I+ H + L+ Y K I +R
Sbjct: 490 EVIRPH-SILRNNPYCKRIFSR 510
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 9/215 (4%)
Query: 463 LLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALA 522
L+E K+ K S + + D G+ IQ+ L+ +TE+ ++++ +
Sbjct: 294 LVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCID 353
Query: 523 LMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKI 582
+ T G V+QK + QR +L ++ + L L+ YG +Q +E+ D
Sbjct: 354 IATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIA 413
Query: 583 NMVQELDGNIMRCVRDQNGNHVIQKCIECVPED----AIDFIVSTFFDQVVTLSTHPYGC 638
M+ +L G+ + + +H++++C+ PE + I FD L PY
Sbjct: 414 AMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELISVPHFD---ILIQDPYAN 470
Query: 639 RVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQY 673
VIQ L K + + E++ S+L + Y
Sbjct: 471 FVIQAALAVTK--GSLHATLVEVIRPHSILRNNPY 503
>AT1G78160.1 | Symbols: APUM7, PUM7 | pumilio 7 |
chr1:29407900-29410184 FORWARD LENGTH=650
Length = 650
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 178/321 (55%), Gaps = 17/321 (5%)
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
+ +I G+V + DQ+G RF+Q+ + T+ + +++ E++ H + LM D FGNY++QK
Sbjct: 331 MCDIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKL 390
Query: 537 FEHGLASQRREL---ANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQ-ELDGNI 592
+ QR ++ A + ++ +SL YG RV+Q+ +E + ++I++V+ L
Sbjct: 391 LDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGF 450
Query: 593 MRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPN 652
+ ++D NGNHVIQ+C++C+ + FI ++TH +GC V+Q+ + +
Sbjct: 451 LDLIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMR-Q 509
Query: 653 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASN 712
++K++ EI +LAQD +GNY VQ V+E P + ++ +L G+ VQ+S QKF+S+
Sbjct: 510 QREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSH 569
Query: 713 VVEKCLAF-------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILS 765
+VE+CL +V E++ ++ LQ D +AN+V+Q L ++
Sbjct: 570 MVERCLMHCPESRPQIVRELVSVPHFDQLLQ----DPYANFVIQAALAATKGPLHASLVE 625
Query: 766 RIKVHLNALKKYTYGKHIVAR 786
I+ H + L+ Y K I +R
Sbjct: 626 VIRPH-SILRNNPYCKRIFSR 645
>AT5G56510.1 | Symbols: APUM12, PUM12 | pumilio 12 |
chr5:22881721-22883842 FORWARD LENGTH=596
Length = 596
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 176/323 (54%), Gaps = 21/323 (6%)
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
++E G + + DQ+G RF+Q+ + M++ EI+ + LM D FGNY+VQK
Sbjct: 275 IAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKL 334
Query: 537 FEHGLASQRRELANKLFSH---VLTLSLQMYGCRVIQKAIEVVDLDQKINMV-QELDGNI 592
E QR ++ + + ++ +S M+G R +QK +E +++I+++ L I
Sbjct: 335 LEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGI 394
Query: 593 MRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPN 652
+ +++ NGNHV+Q+C++ + F+ V L+T +GC V+Q+ L + +
Sbjct: 395 VHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGY-SEGE 453
Query: 653 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASN 712
+Q ++ EI +L+QD +GNYV+Q+V E I+++L GN ++S QK +SN
Sbjct: 454 QKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSN 513
Query: 713 VVEKCL--------AFLVNEML--GSTDENEPLQAMMKDQFANYVVQKVLETCDDHQREL 762
VVEKCL A ++ E++ G D+ +M D + NYV+Q L+ + L
Sbjct: 514 VVEKCLKLADDKHRARIIRELINYGRLDQ------VMLDPYGNYVIQAALKQSKGNVHAL 567
Query: 763 ILSRIKVHLNALKKYTYGKHIVA 785
++ IK+++++L+ YGK +++
Sbjct: 568 LVDAIKLNISSLRTNPYGKKVLS 590
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 7/217 (3%)
Query: 580 QKINMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCR 639
QK N + E G I +DQ+G +Q+ + I+ I + D + L P+G
Sbjct: 270 QKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNY 329
Query: 640 VIQRVLEHCKDPNTQQKV--MDEILGAVSMLAQDQYGNYVVQHVLEHGKPHER-SAIIKE 696
++Q++LE C + Q V + G + ++ D +G VQ ++E K E S II
Sbjct: 330 LVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISA 389
Query: 697 LAGNIVQMSQQKFASNVVEKCLAFLV---NEMLGSTDENEPLQAMMKDQFANYVVQKVLE 753
L IV + + ++VV++CL +L+ + L ++ + D+ V+QK L
Sbjct: 390 LKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVE-LATDRHGCCVLQKCLG 448
Query: 754 TCDDHQRELILSRIKVHLNALKKYTYGKHIVARVEKL 790
+ Q++ ++S I + L + +G +++ V +L
Sbjct: 449 YSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFEL 485
>AT4G08840.1 | Symbols: APUM11, PUM11 | pumilio 11 |
chr4:5631298-5633779 FORWARD LENGTH=556
Length = 556
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 173/316 (54%), Gaps = 19/316 (6%)
Query: 482 GHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGL 541
G V + DQ G R +Q+ ++ + ++++E++ + + L TD FGNY++QK E
Sbjct: 244 GSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCN 303
Query: 542 ASQRRELANKLFSH---VLTLSLQMYGCRVIQKAIEVVDLDQKINMVQE-LDGNIMRCVR 597
QR ++ +L S ++ +S+ YG RV+QK IE V ++I++V+ L + R
Sbjct: 304 EEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFR 363
Query: 598 DQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKV 657
+ NGNHVI C++ + FI+ + ++T +GC V+QR + + +K+
Sbjct: 364 ELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQ-HEKL 422
Query: 658 MDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKC 717
+DEI +LAQD +GNY+VQ+++E K ++ EL GN V+++ QKF S+VVEKC
Sbjct: 423 VDEISRNSLLLAQDPFGNYLVQYIIE--KKVGGVNVLFELRGNYVKLATQKFGSHVVEKC 480
Query: 718 LAF-------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVH 770
L + +VNE++ + +++D +ANYV+Q L R ++ +++ +
Sbjct: 481 LRYYPESRSQIVNELVSVLN----FGYLLQDPYANYVIQCALSKTKGFVRASLVEKVRRY 536
Query: 771 LNALKKYTYGKHIVAR 786
N LK Y K I ++
Sbjct: 537 EN-LKMTPYCKRIFSK 551
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 121/231 (52%), Gaps = 19/231 (8%)
Query: 476 ELSEISGHVVEFSADQYGSRFIQQKLETATTEEK-TMVYQEIMPHALALMTDVFGNYVV- 533
L+ G +V+ S + YG+R +Q+ +ET TT+E+ ++V ++P L+L ++ GN+V+
Sbjct: 313 RLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFRELNGNHVIL 372
Query: 534 --QKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGN 591
KFF E A K + ++ +GC V+Q+ + +Q +V E+ N
Sbjct: 373 NCLKFFSPNDNKFILEAATKF---CIEIATTRHGCCVLQRCVSYSVGEQHEKLVDEISRN 429
Query: 592 IMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFD---QVVTLSTHPYGCRVIQRVLEHC 648
+ +D GN+++Q IE V+ F+ V L+T +G V+++ L +
Sbjct: 430 SLLLAQDPFGNYLVQYIIEKKVGG-----VNVLFELRGNYVKLATQKFGSHVVEKCLRYY 484
Query: 649 KDPNTQQKVMDEILGAVSM--LAQDQYGNYVVQHVLEHGKPHERSAIIKEL 697
P ++ ++++E++ ++ L QD Y NYV+Q L K R+++++++
Sbjct: 485 --PESRSQIVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLVEKV 533
>AT1G35730.1 | Symbols: APUM9, PUM9 | pumilio 9 |
chr1:13227324-13229796 REVERSE LENGTH=564
Length = 564
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 175/331 (52%), Gaps = 34/331 (10%)
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
+ EI G V + DQ G R +Q+ +E T E ++ I+ H + L D FGNY+VQK
Sbjct: 247 MVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKL 306
Query: 537 FEHGLASQRRELANKLFSH---VLTLSLQMYGCRVIQKAIEVVDLDQKINMVQE-LDGNI 592
F+ QR + + L S+ ++ + L YG RV+QK IE V Q+I +V+ L
Sbjct: 307 FDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGF 366
Query: 593 MRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPN 652
+ V+D NGNHVIQ C++ + + +F++ ++ H +GC V+Q C N
Sbjct: 367 LALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQ-----CCISN 421
Query: 653 T----QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAI--IKELAGNIVQMSQ 706
+ +++++ EI L+QD +GNYVVQ++++ + SA+ + + + +++
Sbjct: 422 SVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLID----QQVSAVKLLVQFRMHYAELAT 477
Query: 707 QKFASNVVEKCL-------AFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQ 759
QKF+S+V+EKCL A +V E+L + + +++D +ANYV+Q L
Sbjct: 478 QKFSSHVIEKCLRKYPESRAEIVRELLCVPN----FEYLLQDPYANYVIQTALSVTKGPV 533
Query: 760 RELILSRI----KVHLNALKKYTYGKHIVAR 786
R +++++ K+H + K + K I+ +
Sbjct: 534 RAKLVAKVYRYGKLHSSPYCKKIFSKTILKK 564
>AT1G35750.1 | Symbols: APUM10, PUM10 | pumilio 10 |
chr1:13253398-13255570 REVERSE LENGTH=528
Length = 528
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 165/326 (50%), Gaps = 29/326 (8%)
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
+ EI G V + DQ G R +Q+ +E T + +++ EI+ H + L D GNY+VQK
Sbjct: 211 MVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKL 270
Query: 537 FEHGLASQRRELANKLFS---HVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQE-LDGNI 592
QR + + L S ++ + L G RVIQK I+ V Q+I +V+ L+
Sbjct: 271 LVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGF 330
Query: 593 MRCVRDQNGNHVIQKCIE-CVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDP 651
+ V D NG HV+Q C+E VP D F+V + L+TH YGC V+Q C
Sbjct: 331 LVLVNDSNGYHVLQSCLEFLVPNDN-KFVVEAATEYCAQLATHQYGCYVLQ-----CSLI 384
Query: 652 NT----QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQ 707
NT ++++ EI L+QD +GNYVVQ +++ ++ + ++++ Q
Sbjct: 385 NTVGLQHERLVAEISRDSLRLSQDPFGNYVVQCLIDQQV--SSVNLLLPFRTHCIELATQ 442
Query: 708 KFASNVVEKCL-------AFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQR 760
KF+S+V+EKCL A +V E+L + + +++D +ANYV+Q L R
Sbjct: 443 KFSSHVIEKCLRKYPESRAEIVRELLSYPN----FEQLLQDPYANYVIQTALSVTKGAVR 498
Query: 761 ELILSRIKVHLNALKKYTYGKHIVAR 786
++ ++K L+ Y K I ++
Sbjct: 499 ARLVEKVK-RFGKLQSNPYCKKIFSK 523
>AT5G43090.1 | Symbols: APUM13, PUM13 | pumilio 13 |
chr5:17295933-17298171 FORWARD LENGTH=527
Length = 527
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 142/320 (44%), Gaps = 19/320 (5%)
Query: 482 GHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGL 541
G + D+ S+ +++ + T E M++ ++ LM D FGN VV+
Sbjct: 211 GSYFSIATDRVWSKELEKTIFVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCS 270
Query: 542 ASQR-----------RELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDG 590
+ Q + N F+ + TL++Q+ + ++A +Q ++ +
Sbjct: 271 SEQIILIVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERAN-----NQIPRIMDAISS 325
Query: 591 NIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKD 650
++ R+ N +VI C ++ ++ GC ++Q+ + +
Sbjct: 326 VALQLTRNTNAKYVILACFRMFTSSQCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERV 385
Query: 651 PN--TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQK 708
PN +Q+++ E++ L + +GNYVVQ+V+E HE ++ +L N +++ K
Sbjct: 386 PNHEIRQRLISEVIEHALKLCLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNK 445
Query: 709 FASNVVEKCLAFL-VNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRI 767
+ S+VV+K L ++ L D + ++ D F NYV+Q + R+++ I
Sbjct: 446 YGSHVVQKLLKLRGIDSKLIVVDLLRGIDTLLLDPFGNYVIQTAWFVSKEDVRQMLRYYI 505
Query: 768 KVHLNALKKYTYGKHIVARV 787
+ ++ ++ +G I+ ++
Sbjct: 506 ERNIRLMRCNKFGNKILEKL 525
>AT5G43110.1 | Symbols: APUM14, PUM14 | pumilio 14 |
chr5:17309842-17311937 FORWARD LENGTH=518
Length = 518
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 142/325 (43%), Gaps = 16/325 (4%)
Query: 475 FELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQ 534
F+ ++ F+ D+ S + + T E +Y ++ LM D +G+ VVQ
Sbjct: 196 FDYNQCQASFSAFAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQ 255
Query: 535 KFFEHGLASQRRELAN----KLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDG 590
+ Q +L + ++F V + + G IQ + ++ K + + +D
Sbjct: 256 LLMRRCSSEQIVQLVDIVTQQMFQFV-NICIDSLGTNAIQVLLTCINERAKDQIPRIVD- 313
Query: 591 NIMRCVRDQ--NGNH---VIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVL 645
++R V Q NH VI C P ++ ++ +GC ++Q
Sbjct: 314 -VVRTVALQLSKSNHAIFVILACFRLFPLHC-RLLLELIVQNCHQIAIDQHGCCLLQLCF 371
Query: 646 EHCKDPN--TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQ 703
+ PN +Q+++ E + L + YGNYVVQ+++E + A++++L GN
Sbjct: 372 NKDRVPNLEIRQRLIMEAIANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAH 431
Query: 704 MSQQKFASNVVEKCLAF-LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQREL 762
+++ K+ S+ V+K L ++ + D + ++ D F NYV+Q D R +
Sbjct: 432 LARNKYGSHAVQKLLKLRWIDSRVIVIDLLREIDTLLLDPFGNYVIQTAWFVSKDDVRRM 491
Query: 763 ILSRIKVHLNALKKYTYGKHIVARV 787
+ I+ ++ ++ +G ++ ++
Sbjct: 492 LRYHIERNIPMMRCNKFGNKVLEKL 516
>AT5G59280.1 | Symbols: APUM16, PUM16 | pumilio 16 |
chr5:23914141-23915139 REVERSE LENGTH=332
Length = 332
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 565 GCRVIQKAIEVVDLDQKINMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTF 624
G + +QK + + D D + + + + + D+ ++V + + +D + +
Sbjct: 96 GSKTLQKLMGMSD-DMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVFQQDKRELMYDQI 154
Query: 625 FDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEH 684
L+ YGC + ++ DP + +++D + +L+ D YGN+VVQHVL+
Sbjct: 155 LRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQHVLKL 214
Query: 685 GKPHERSAIIKELAGNIVQMSQQKFASNVVEKCL-------AFLVNEMLGSTDENEPLQA 737
I +L G V++S +K+ S +VE+ L A +V ++L + E L
Sbjct: 215 RDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLLAC--KTEMLIR 272
Query: 738 MMKDQFANYVVQKVLE 753
+ + ++ N+VV K LE
Sbjct: 273 LARSEYGNFVVCKALE 288
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 10/207 (4%)
Query: 483 HVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLA 542
+ + + ++ GS+ +Q KL + + ++ IM + +MTD + +YV +
Sbjct: 86 YFMVITTNKNGSKTLQ-KLMGMSDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVFQQ 144
Query: 543 SQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELD---GNIMRCVRDQ 599
+R + +++ + L+ YGC + + I DLD Q LD N + D
Sbjct: 145 DKRELMYDQILRYACFLAGDQYGCIALNEII--TDLDDPYYRDQLLDIVANNALLLSNDA 202
Query: 600 NGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMD 659
GN V+Q ++ I V LS YG +++R+LE P V+D
Sbjct: 203 YGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVP-MATVVLD 261
Query: 660 EILGAVSM---LAQDQYGNYVVQHVLE 683
+ M LA+ +YGN+VV LE
Sbjct: 262 LLACKTEMLIRLARSEYGNFVVCKALE 288
>AT1G35850.1 | Symbols: APUM17, PUM17 | pumilio 17 |
chr1:13330510-13331506 FORWARD LENGTH=304
Length = 304
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 598 DQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKV 657
D+ ++V + + +D + + + L+ YGC + +++ DP + ++
Sbjct: 100 DKYASYVAIQGMRIFKQDKRELMYDHILRYALFLARDQYGCIALNEIIKELDDPYYRDEL 159
Query: 658 MDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKFASNVVEKC 717
MD + +L+ D YGN+VVQHVL+ I +L G V++S +K+ S +VE+
Sbjct: 160 MDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERL 219
Query: 718 L-------AFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDD-HQRELILSRIKV 769
L A +V ++L + E L + + + N+VV K+LE +D +L S +
Sbjct: 220 LEVRDIPMATIVLDLLAC--KTEMLIRLARSENGNFVVCKLLELTNDILTADLFYSLV-- 275
Query: 770 HLNALKKYTYGKHIVARVEKLVAAGERRI 798
N L+ Y + H + + G R+
Sbjct: 276 --NKLRPYRFLLHRFPESKIVAILGSMRV 302
>AT5G09610.1 | Symbols: APUM21, PUM21 | pumilio 21 |
chr5:2981156-2982709 FORWARD LENGTH=517
Length = 517
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 588 LDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEH 647
+D N + D+ G +I I V + + + ++ + L+ GC + VL+
Sbjct: 294 VDTNFFLLMSDKYGRGLIIPAIRAVDKTKKESLYKLTYEYTLHLARLETGCLALNNVLQE 353
Query: 648 CKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQ 707
+ + + + + L+ D YG +VVQ++L P +AI + L G+ +++ +
Sbjct: 354 IRGI-YRDLIFECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAME 412
Query: 708 KFASNVVEKCLAF------LVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRE 761
+ S VVEKCL ++ E G+ E M D+F N+VVQ L + +
Sbjct: 413 RQGSYVVEKCLKSDFARDQVLEEFRGNAKE---WVRMTTDKFGNFVVQSALRVMKEKEMR 469
Query: 762 LIL 764
+L
Sbjct: 470 PLL 472
>AT4G08560.1 | Symbols: APUM15, PUM15 | pumilio 15 |
chr4:5450434-5453183 FORWARD LENGTH=477
Length = 477
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 119/287 (41%), Gaps = 36/287 (12%)
Query: 488 SADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRE 547
+ D S +Q + E ++ ++ H LM D +G+ V +K E Q
Sbjct: 159 AKDGIESHMLQYVIAKGLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITR 218
Query: 548 LANKLFSH---VLTLSLQMYGCRVIQKAIEVVDLDQKINMVQELDGNI-MRCVRDQNGNH 603
+ + + + L + +G IQ + + +++I+ E + + +D +
Sbjct: 219 VLDIVLEEPFEFVRLCVHTHGTHAIQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHR 278
Query: 604 VIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEH----CKDPNTQQKVMD 659
VI C +++ ++ GC ++++++ +DP ++
Sbjct: 279 VILFCFNQFSPSHTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDP-----LIK 333
Query: 660 EILGAVSMLAQDQYG----------NYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQKF 709
EI+ L + YG NYVVQ++L SA+ K L GN VQ+S K+
Sbjct: 334 EIISIAVRLCGNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKY 393
Query: 710 ASNVVEKCLA-------FLVNEMLGSTDENEPLQAMMKDQFANYVVQ 749
S+VV+KCL ++ E+L D +++ D + +YV+Q
Sbjct: 394 GSHVVQKCLESREFSSRRIIAELLSDID------SLLVDPYGDYVIQ 434
>AT5G60110.1 | Symbols: APUM18, PUM18 | pumilio 18 |
chr5:24201954-24202937 FORWARD LENGTH=327
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 9/215 (4%)
Query: 477 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 536
L+ S + + ++GSR +Q KL + + I+ L + TD + +YV +
Sbjct: 77 LTSDSDYFMSIVTTKFGSRRVQ-KLLGKSDDVDAFFCAAILRRFLHITTDKYASYVTIRA 135
Query: 537 FEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVD----LDQKINMVQELDGNI 592
++ L ++ H L L+ +GC + I D DQ + +V N
Sbjct: 136 MVVFDKVMKKALYERILYHALDLACDQHGCIALNDIITDADDPYYRDQLLELVAS---NA 192
Query: 593 MRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPN 652
+R D +GN V+Q + I I + Q + LS YG +++++LE +
Sbjct: 193 LRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMV 252
Query: 653 TQQKVMDEILGAVSM-LAQDQYGNYVVQHVLEHGK 686
+ G M LA++++GN+VV L K
Sbjct: 253 VVVVELLGCDGDRLMRLARNEFGNFVVVKALRFTK 287
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 103/238 (43%), Gaps = 8/238 (3%)
Query: 523 LMTDVFGNYVVQKFFEHGLASQRRELANKLFS---HVLTLSLQMYGCRVIQKAIEVVDLD 579
LMTD G ++ + ++ + +A+ L S + +++ +G R +QK + D D
Sbjct: 48 LMTDGDGVSYFKEMISNSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSD-D 106
Query: 580 QKINMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCR 639
+ + D+ ++V + + + + + L+ +GC
Sbjct: 107 VDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCI 166
Query: 640 VIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAG 699
+ ++ DP + ++++ + L+ D GN+VVQHVL I L G
Sbjct: 167 ALNDIITDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYG 226
Query: 700 NIVQMSQQKFASNVVEKCLAFLVNEMLGSTD----ENEPLQAMMKDQFANYVVQKVLE 753
+++S +K+ S +VEK L + ++ + + + L + +++F N+VV K L
Sbjct: 227 QCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALR 284
>AT1G21620.1 | Symbols: APUM20, PUM20 | pumilio 20 |
chr1:7579129-7580171 FORWARD LENGTH=308
Length = 308
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 36/195 (18%)
Query: 436 SGMRNVAGVMGPWHLDSGNMDESFASSLLEEFKSNKTKCFELSEISGHVVEFSADQYGSR 495
+G + + ++G + ++D FA+++L F H++ D+Y S
Sbjct: 102 NGSKRIQKLLG----KTDDVDALFAAAILRRF--------------LHII---TDKYASY 140
Query: 496 FIQQKLETATTEEKTMVYQEIM---------PHALALMTDVFGNYVVQKFFEHGLASQRR 546
+++ + ++K +Y+ I+ HAL L D +GN+V+Q+ + +
Sbjct: 141 VVRRGMTVFDKKKKKAMYEHILHYASHIARDKHALVLSNDAYGNFVIQRVLKLNDLRSKN 200
Query: 547 ELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKINMVQEL---DGN-IMRCVRDQNGN 602
+ L H + LS Q YG V+ +E + + +V+EL +G+ +MR R++ GN
Sbjct: 201 NIVVSLRGHFVDLSFQKYGSYVVDVLLETK--ESMVVVVEELMECEGDMLMRLARNEYGN 258
Query: 603 HVIQKCIECVPEDAI 617
++ K + ++ +
Sbjct: 259 FLVCKALRVTQKEMV 273
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 597 RDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQK 656
R+ NG+ IQK + +D + + + + T Y V++R + D ++
Sbjct: 99 RNMNGSKRIQKLLGKT-DDVDALFAAAILRRFLHIITDKYASYVVRRGMT-VFDKKKKKA 156
Query: 657 VMDEILGAVSMLAQDQ---------YGNYVVQHVLEHGKPHERSAIIKELAGNIVQMSQQ 707
+ + IL S +A+D+ YGN+V+Q VL+ ++ I+ L G+ V +S Q
Sbjct: 157 MYEHILHYASHIARDKHALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQ 216
Query: 708 KFASNVVEKCL------AFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRE 761
K+ S VV+ L +V E++ E + L + ++++ N++V K L Q+E
Sbjct: 217 KYGSYVVDVLLETKESMVVVVEELMEC--EGDMLMRLARNEYGNFLVCKALRVT---QKE 271
Query: 762 LI 763
++
Sbjct: 272 MV 273
>AT5G60180.1 | Symbols: APUM19, PUM19 | pumilio 19 |
chr5:24233024-24234007 REVERSE LENGTH=327
Length = 327
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 631 LSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHER 690
L+ +GC + ++ DP + ++++ ++ L+ D GN+VVQHVL
Sbjct: 158 LACDQHGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCI 217
Query: 691 SAIIKELAGNIVQMSQQKFASNVVEKCLAFLVNEMLGSTD----ENEPLQAMMKDQFANY 746
I L G +++S +K+ S +VEK L + ++ + + + L + +++F N+
Sbjct: 218 HNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNF 277
Query: 747 VVQKVLETCDDHQRELI 763
VV K L + + +L
Sbjct: 278 VVVKALRFTKEMRMDLF 294