Miyakogusa Predicted Gene

Lj0g3v0219409.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0219409.1 Non Chatacterized Hit- tr|D7LSB0|D7LSB0_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,82.05,0,Phosphoenolpyruvate/pyruvate
domain,Pyruvate/Phosphoenolpyruvate kinase; no
description,Pyruvate/Pho,CUFF.14192.1
         (216 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G61530.2 | Symbols: PANB2 | Phosphoenolpyruvate carboxylase f...   330   5e-91
AT3G61530.1 | Symbols: PANB2 | Phosphoenolpyruvate carboxylase f...   330   5e-91
AT2G46110.1 | Symbols: PANB1, KPHMT1 | ketopantoate hydroxymethy...   317   4e-87

>AT3G61530.2 | Symbols: PANB2 | Phosphoenolpyruvate carboxylase
           family protein | chr3:22771692-22773313 REVERSE
           LENGTH=354
          Length = 354

 Score =  330 bits (845), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 158/196 (80%), Positives = 174/196 (88%)

Query: 21  RRATTQCSSLLRCIRSMSNVPENTVYSGPISQNSNQRVTLAQLRQKHKKSEPISMVTAYD 80
           R   ++ S  +  +R MSNVPE+TVY GP  QNSNQRVTL QLRQKH+K EPI+MVTAYD
Sbjct: 7   RSCCSRASRAITTVRFMSNVPEDTVYGGPKPQNSNQRVTLTQLRQKHRKGEPITMVTAYD 66

Query: 81  YPSAVPVDMAGIDICLVGDSAAMVVHGYDTTLPITIDEMLVHCRAVARGAKTPLLVGDLP 140
           YPSAV +D AGID+CLVGDSAAMVVHGYDTTLPI+++EMLVHCRAVARGAK PLLVGDLP
Sbjct: 67  YPSAVHIDTAGIDVCLVGDSAAMVVHGYDTTLPISLEEMLVHCRAVARGAKRPLLVGDLP 126

Query: 141 FGTYECSPNQAVDAAVRILKEGRMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQA 200
           FGTYE S NQAVD AVR+LKEG MDAIKLEGGSPSRI AAK+IVEAGIAVMGHVGLTPQA
Sbjct: 127 FGTYESSTNQAVDTAVRVLKEGGMDAIKLEGGSPSRITAAKSIVEAGIAVMGHVGLTPQA 186

Query: 201 ISVLGGFRPQGRNVAS 216
           ISVLGGFRPQG+N+AS
Sbjct: 187 ISVLGGFRPQGKNIAS 202


>AT3G61530.1 | Symbols: PANB2 | Phosphoenolpyruvate carboxylase
           family protein | chr3:22771692-22773313 REVERSE
           LENGTH=354
          Length = 354

 Score =  330 bits (845), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 158/196 (80%), Positives = 174/196 (88%)

Query: 21  RRATTQCSSLLRCIRSMSNVPENTVYSGPISQNSNQRVTLAQLRQKHKKSEPISMVTAYD 80
           R   ++ S  +  +R MSNVPE+TVY GP  QNSNQRVTL QLRQKH+K EPI+MVTAYD
Sbjct: 7   RSCCSRASRAITTVRFMSNVPEDTVYGGPKPQNSNQRVTLTQLRQKHRKGEPITMVTAYD 66

Query: 81  YPSAVPVDMAGIDICLVGDSAAMVVHGYDTTLPITIDEMLVHCRAVARGAKTPLLVGDLP 140
           YPSAV +D AGID+CLVGDSAAMVVHGYDTTLPI+++EMLVHCRAVARGAK PLLVGDLP
Sbjct: 67  YPSAVHIDTAGIDVCLVGDSAAMVVHGYDTTLPISLEEMLVHCRAVARGAKRPLLVGDLP 126

Query: 141 FGTYECSPNQAVDAAVRILKEGRMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQA 200
           FGTYE S NQAVD AVR+LKEG MDAIKLEGGSPSRI AAK+IVEAGIAVMGHVGLTPQA
Sbjct: 127 FGTYESSTNQAVDTAVRVLKEGGMDAIKLEGGSPSRITAAKSIVEAGIAVMGHVGLTPQA 186

Query: 201 ISVLGGFRPQGRNVAS 216
           ISVLGGFRPQG+N+AS
Sbjct: 187 ISVLGGFRPQGKNIAS 202


>AT2G46110.1 | Symbols: PANB1, KPHMT1 | ketopantoate
           hydroxymethyltransferase 1 | chr2:18954807-18956411
           REVERSE LENGTH=347
          Length = 347

 Score =  317 bits (812), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 154/195 (78%), Positives = 170/195 (87%), Gaps = 2/195 (1%)

Query: 24  TTQCSSLLRCI--RSMSNVPENTVYSGPISQNSNQRVTLAQLRQKHKKSEPISMVTAYDY 81
           T  CS   + I  R MSN+PENTVY GP  QN NQRVTL  LRQKH++ EPI++VTAYDY
Sbjct: 6   TRNCSRFSKAISVRFMSNLPENTVYGGPKPQNPNQRVTLTHLRQKHRRGEPITVVTAYDY 65

Query: 82  PSAVPVDMAGIDICLVGDSAAMVVHGYDTTLPITIDEMLVHCRAVARGAKTPLLVGDLPF 141
           PSAV +D AGID+CLVGDSA+MVVHG+DTTLPI++DEMLVHCRAVARGAK PLLVGDLPF
Sbjct: 66  PSAVHLDTAGIDVCLVGDSASMVVHGHDTTLPISLDEMLVHCRAVARGAKRPLLVGDLPF 125

Query: 142 GTYECSPNQAVDAAVRILKEGRMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAI 201
           GTYE S +QAVD AVR+LKEG MDAIKLEGGS SRI AAKAIVEAGIAV+GHVGLTPQAI
Sbjct: 126 GTYESSSSQAVDTAVRVLKEGGMDAIKLEGGSASRITAAKAIVEAGIAVIGHVGLTPQAI 185

Query: 202 SVLGGFRPQGRNVAS 216
           SVLGGFRPQGRN+AS
Sbjct: 186 SVLGGFRPQGRNIAS 200