Miyakogusa Predicted Gene

Lj0g3v0218549.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0218549.1 tr|G0V3M0|G0V3M0_9CLOT Nicotinamidase
OS=Caloramator australicus RC3 PE=4
SV=1,32.39,2e-16,Isochorismatase-like hydrolases,Isochorismatase-like;
no description,Isochorismatase-like; Isochoris,CUFF.14143.1
         (242 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G22570.1 | Symbols: ATNIC1, NIC1 | nicotinamidase 1 | chr2:95...   319   1e-87
AT2G22570.2 | Symbols: ATNIC1, NIC1 | nicotinamidase 1 | chr2:95...   206   9e-54

>AT2G22570.1 | Symbols: ATNIC1, NIC1 | nicotinamidase 1 |
           chr2:9589604-9590846 REVERSE LENGTH=244
          Length = 244

 Score =  319 bits (817), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 145/243 (59%), Positives = 192/243 (79%), Gaps = 1/243 (0%)

Query: 1   MGSLTPTLQLVKEEIPV-KQQPLRLSGDIKTGLVLVDVVNGFCTVGAGNMAPTEPNEKIT 59
           M +       +K++IPV +++PL L+ D   GLV+VDVVNGFCT+G+GNMAPT+ NE+I+
Sbjct: 1   MANHETIFDQLKKQIPVDEEEPLILNRDSSVGLVIVDVVNGFCTIGSGNMAPTKHNEQIS 60

Query: 60  KMVEESVSLSKKFAEKNWPIFAFLDSHHPDIPEPPYPSHCLIGSDEGKLVPELLWLENEP 119
           KMVEES  L+++F ++ WP+ AF+DSHHPDIPE PYP HC+IG++E +LVP L WLE+E 
Sbjct: 61  KMVEESAKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESED 120

Query: 120 NATLRRKECIDGFLGSYEKDGSNVFADWVKKNQIKQILVAGICTDVCVLDFVCSVLSARN 179
            ATLRRK+CI+GF+GS E DGSNVF DWVK+ QIK I+V GICTD+CV DFV + LSARN
Sbjct: 121 CATLRRKDCINGFVGSMESDGSNVFVDWVKEKQIKVIVVVGICTDICVFDFVATALSARN 180

Query: 180 RQFLPPLENVIVSTEACSTYDVPLHVAKTNKDWVSHPQELMHHIGLYIACGRGAEIASEV 239
              L P+E+V+V +  C+T+D+PLHVAK  K   +HPQELMHH+GLY+A GRGA++ S++
Sbjct: 181 HGVLSPVEDVVVYSRGCATFDLPLHVAKDIKGAQAHPQELMHHVGLYMAKGRGAQVVSKI 240

Query: 240 IFE 242
            FE
Sbjct: 241 SFE 243


>AT2G22570.2 | Symbols: ATNIC1, NIC1 | nicotinamidase 1 |
           chr2:9590021-9590846 REVERSE LENGTH=175
          Length = 175

 Score =  206 bits (525), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 94/157 (59%), Positives = 125/157 (79%), Gaps = 1/157 (0%)

Query: 1   MGSLTPTLQLVKEEIPV-KQQPLRLSGDIKTGLVLVDVVNGFCTVGAGNMAPTEPNEKIT 59
           M +       +K++IPV +++PL L+ D   GLV+VDVVNGFCT+G+GNMAPT+ NE+I+
Sbjct: 1   MANHETIFDQLKKQIPVDEEEPLILNRDSSVGLVIVDVVNGFCTIGSGNMAPTKHNEQIS 60

Query: 60  KMVEESVSLSKKFAEKNWPIFAFLDSHHPDIPEPPYPSHCLIGSDEGKLVPELLWLENEP 119
           KMVEES  L+++F ++ WP+ AF+DSHHPDIPE PYP HC+IG++E +LVP L WLE+E 
Sbjct: 61  KMVEESAKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESED 120

Query: 120 NATLRRKECIDGFLGSYEKDGSNVFADWVKKNQIKQI 156
            ATLRRK+CI+GF+GS E DGSNVF DWVK+ QIK +
Sbjct: 121 CATLRRKDCINGFVGSMESDGSNVFVDWVKEKQIKVV 157