Miyakogusa Predicted Gene

Lj0g3v0218509.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0218509.1 Non Chatacterized Hit- tr|I1N1V5|I1N1V5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,60.64,0,seg,NULL;
coiled-coil,NULL; BHLH FAMILY PROTEIN,NULL; STRUCTURAL MAINTENANCE OF
CHROMOSOMES SMC FAMI,CUFF.14123.1
         (876 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G38070.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   396   e-110

>AT4G38070.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr4:17876535-17882569 FORWARD
           LENGTH=1513
          Length = 1513

 Score =  396 bits (1018), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 276/619 (44%), Positives = 408/619 (65%), Gaps = 12/619 (1%)

Query: 5   IYEELDEAKAEIERLKSELRAKIVSLENLKKSHYAQENQIQEAKLKAENLDQELLQKESA 64
           +YEELDE KA  E+L+ + R K   LENLKK    Q  +I+EA+L  E    E+ +K   
Sbjct: 4   VYEELDEVKAVNEKLRIDYRNKTELLENLKKVQNEQLIEIREARLVNEKHGFEIEEKSRE 63

Query: 65  IAEAKQLWEDLKGNLNEQASIIKHLTAANDKLRVDCDEKFNNWENEKNGLLLALDEANEK 124
           IAE K+  E+L+  L E+ S++K +   NDKLR + ++K+  +E EK  ++  LDEA+EK
Sbjct: 64  IAELKRANEELQRCLREKDSVVKRVNDVNDKLRANGEDKYREFEEEKRNMMSGLDEASEK 123

Query: 125 AESQEQQIYLYRQEIQCLKDSLSVSQKKCLENEKNFKASNELRERDDLFQKIEDEKRKVE 184
               EQ+  +YR EI+ LK  L+V++ K +E EK  K   E+R RDD+  K+E+EK +VE
Sbjct: 124 NIDLEQKNNVYRAEIEGLKGLLAVAETKRIEAEKTVKGMKEMRGRDDVVVKMEEEKSQVE 183

Query: 185 DQLKWKKEQFKHLEEAHEKLRDEFRSCKKEWEMLKSTLLDEISSLEIKLDSQDRISENLQ 244
           ++LKWKKEQFKHLEEA+EKL++ F+  KKEWE  KS LLDEI SL+ KLDS  RISE+LQ
Sbjct: 184 EKLKWKKEQFKHLEEAYEKLKNLFKDSKKEWEEEKSKLLDEIYSLQTKLDSVTRISEDLQ 243

Query: 245 HQLQTCHQALAHVESQKKRLEVEVSDFKEKLDNASSEYQDARLQLDCLNSQCDSDIADLR 304
            +LQ C+ AL   E+++K LE++VS+FK K ++A +E QDAR QLD L  + D ++A+LR
Sbjct: 244 KKLQMCNGALTQEETRRKHLEIQVSEFKAKYEDAFAECQDARTQLDDLAGKRDWEVAELR 303

Query: 305 YSLKANEAYHKELKYRIEKLEQENQELRMSLKEFQEAQIQEAGGS-YSQSKPKRRNLEQT 363
            +L   +AY KE+KY   KLEQEN+EL  SLKE QEA IQ +G S  S+ K K RNLE  
Sbjct: 304 QTLSMKDAYFKEMKYENGKLEQENRELLGSLKELQEATIQGSGNSALSKLKNKFRNLENI 363

Query: 364 HSECSSNFKAKEAEWNSQLEQLKGDLNSCRSELETKIAAVEELQKELERSHSLTIEMKLV 423
           H  CS+N ++KEAEW+SQ+E++  ++N  + +L++K AA++E++ ELE   S T +M+L 
Sbjct: 364 HKNCSANLRSKEAEWSSQVEKMVEEINDYKLQLQSKEAALKEVELELENCRSSTAKMRLQ 423

Query: 424 NEEMSVMLLVLKNGLSEAQEKLANHKNEMDLFNKEREEKIFQ-LMQQLEMKDAALISANK 482
            EE+S+M LVL   +SEAQ +LAN K++  + +++RE   +  LM+QL+ K+AAL  A  
Sbjct: 424 YEEISIMFLVLSRTVSEAQSRLANAKDK-QIKDEKREGNCYSLLMEQLDQKNAALAKAQM 482

Query: 483 SINEECEREACLMRQVESCESKIELQHSLQDELDKHKEMLEESSMYQLILKETVLQMECY 542
            I EE E  ACL++++E  +        +Q E+++ KEM+EESS +Q  ++E + + E  
Sbjct: 483 EIKEERESVACLLKRIEMLDLFENQNIQMQKEVERFKEMVEESSRFQTQMQEKMKEAEND 542

Query: 543 LKEQMKEVHDALDSTLIELDERICERNEMEFELQIWKSIVERMKNDLEENYVMRKELE-- 600
            +E++ +V DALD+T I+L   + ER ++   + + + I E +    E+N VM KE +  
Sbjct: 543 YEEKLLQVCDALDNTNIDL---VAEREKV---VSLTRQI-ESLGTVKEKNLVMEKETQEY 595

Query: 601 TSLLSQVDVCECLKEEKES 619
             +L + + C  L EE+ S
Sbjct: 596 KEMLEESEKCRVLLEEQIS 614



 Score =  131 bits (329), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 212/416 (50%), Gaps = 48/416 (11%)

Query: 480  ANKSINEECEREACLMRQVESCESKIELQHSLQDELDKHKEMLEESSMYQLILKETVLQM 539
            A   + EE E+ A L+R+ ES +  +  +H  Q ELD +KEMLEES+  QL+L+E V+ +
Sbjct: 634  AYAKLAEEVEKTASLVRKSESID--LNEEHR-QRELDHYKEMLEESTKTQLLLQEKVVDV 690

Query: 540  ECYLKEQMKEVHDALDSTLIELDERICERNEMEFELQIWKSIVERMKNDLEENYVMRKEL 599
            E   K ++ +V +AL+    EL ++  E  ++EF+L +WKSI +R+K +LE+N  +RK +
Sbjct: 691  ENDSKRKLADVSEALEIANSELSDKTSEVFQIEFQLWVWKSIAKRLKAELEQNQNLRKRV 750

Query: 600  ETSLLSQVDVCECLKEEKESLVYKLE--EEEKRLDNVRYLQIIEEKDKAXXXXXXXXXXX 657
            E SLL QV V E +K+EK  LV+KL+     +  D+ +   ++ +KD+            
Sbjct: 751  EASLLEQVGVGEAIKQEKNELVHKLKVISHARSSDSEKKESLMRDKDEMLESLQREVELL 810

Query: 658  XXXSFRRELENVLITKGTMERIYEYEKENLIQLMKGKNMRIDEL-------MQQVASMEX 710
               S RRELE+V++     ER  + E+E  I  ++ K+  + E+       ++ V+ +  
Sbjct: 811  EQDSLRRELEDVVLAHMIGERELQNERE--ICALQQKDQDLCEVKHELEGSLKSVSLLLQ 868

Query: 711  XXXXXXXXXXXXXDKTAASQILAAVEIEEKKLMIVELEDDLHAMHQKLK--------LQE 762
                         +K  A QIL AVE E KK+MI+ELE ++ ++ QKL+         ++
Sbjct: 869  QKQNEVNMLRKTWEKLTARQILTAVETESKKMMIIELEGEISSLSQKLETSNESVSCFRQ 928

Query: 763  ENLKQSENLALDNIQVKELKDEM---------EKRNLLE----MSSQRECLLAYVQGFID 809
            E  K    L     ++KE+  +M         EK  L++    +S+++  LL+++    D
Sbjct: 929  EATKSRAELETKQTELKEVTTQMQEKLRTSEAEKTELVKEVASLSTEKRNLLSFISEMED 988

Query: 810  KISEFSSADTQLMDMLRGMEK---SFGPEMNLKKDESFYVKENMLIHSPKMTRKLE 862
             + +    DT+LM  L  + +    FG E N              I SP++  K E
Sbjct: 989  GMLKLYDGDTKLMKTLERVTQCCDGFGKENN----------NGETIGSPRLAMKHE 1034