Miyakogusa Predicted Gene

Lj0g3v0217429.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0217429.1 Non Chatacterized Hit- tr|D7KM80|D7KM80_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,40.17,3e-19,seg,NULL; no description,Protein of unknown
function DUF538; DUF538,Protein of unknown function DUF5,CUFF.14042.1
         (161 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54530.1 | Symbols:  | Protein of unknown function, DUF538 | ...   185   1e-47
AT1G61667.1 | Symbols:  | Protein of unknown function, DUF538 | ...   163   4e-41
AT3G07470.1 | Symbols:  | Protein of unknown function, DUF538 | ...   115   1e-26
AT3G07460.1 | Symbols:  | Protein of unknown function, DUF538 | ...   112   1e-25
AT3G07460.2 | Symbols:  | Protein of unknown function, DUF538 | ...   111   2e-25
AT5G16380.1 | Symbols:  | Protein of unknown function, DUF538 | ...   102   1e-22
AT1G55265.1 | Symbols:  | Protein of unknown function, DUF538 | ...    97   5e-21
AT5G19860.1 | Symbols:  | Protein of unknown function, DUF538 | ...    86   8e-18
AT2G03350.1 | Symbols:  | Protein of unknown function, DUF538 | ...    55   2e-08
AT5G37070.1 | Symbols:  | Protein of unknown function, DUF538 | ...    48   4e-06
AT1G02813.1 | Symbols:  | Protein of unknown function, DUF538 | ...    47   5e-06

>AT5G54530.1 | Symbols:  | Protein of unknown function, DUF538 |
           chr5:22152781-22154201 FORWARD LENGTH=161
          Length = 161

 Score =  185 bits (469), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 83/129 (64%), Positives = 109/129 (84%)

Query: 28  IHDLLKSKGLPAGLLPSEVKSFTFYENGRLEVFLNAPCLTKYENRVYFERVVTANLTYGS 87
           +HD+L+S+GLPAGLLP EV S+  + +GRLEVFL APC  K+E  V+FE VV  NL+YGS
Sbjct: 29  VHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAKFETNVHFEAVVRGNLSYGS 88

Query: 88  LIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPEGGLR 147
           L+GVEGL Q+ELF+WL VKDI+V++P+SG+I+FDIG+A KQLSLSLFEDPP CKP+G L+
Sbjct: 89  LVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKCKPDGVLK 148

Query: 148 NHVRKEKGF 156
             +R+++GF
Sbjct: 149 KKMRRDRGF 157


>AT1G61667.1 | Symbols:  | Protein of unknown function, DUF538 |
           chr1:22767674-22768269 FORWARD LENGTH=156
          Length = 156

 Score =  163 bits (413), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 76/128 (59%), Positives = 98/128 (76%), Gaps = 1/128 (0%)

Query: 28  IHDLLKSKGLPAGLLPSEVKSFTFYE-NGRLEVFLNAPCLTKYENRVYFERVVTANLTYG 86
           I +LL+++GLP GL P  V+S++  +  G LEV L  PC  ++ENRVYF+RV+ ANL+YG
Sbjct: 22  IRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPCFARFENRVYFDRVIKANLSYG 81

Query: 87  SLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPEGGL 146
            L+G+EGL QEELF+WLPVK I V+DPSSGL+LFDIG+AHKQ+S SLFEDPP C P G +
Sbjct: 82  GLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQISRSLFEDPPVCYPPGSI 141

Query: 147 RNHVRKEK 154
              + K K
Sbjct: 142 MEKLEKSK 149


>AT3G07470.1 | Symbols:  | Protein of unknown function, DUF538 |
           chr3:2387291-2388343 REVERSE LENGTH=169
          Length = 169

 Score =  115 bits (289), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 1/120 (0%)

Query: 28  IHDLLKSKGLPAGLLPSEVKSFTF-YENGRLEVFLNAPCLTKYENRVYFERVVTANLTYG 86
           I+++L + GLP+G+ P  V+ FTF  E GR  V+LN  C  KYE  ++++  +T  +   
Sbjct: 31  IYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIHYDANITGTIGSA 90

Query: 87  SLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPEGGL 146
            +  + G+  +ELF+W PVK I VD PSSGLI FD+G+  KQ SLSLFE P  C P  G+
Sbjct: 91  QISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCVPVRGI 150


>AT3G07460.1 | Symbols:  | Protein of unknown function, DUF538 |
           chr3:2384837-2385617 REVERSE LENGTH=177
          Length = 177

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/114 (47%), Positives = 72/114 (63%), Gaps = 1/114 (0%)

Query: 28  IHDLLKSKGLPAGLLPSEVKSFTFY-ENGRLEVFLNAPCLTKYENRVYFERVVTANLTYG 86
           I ++L + GLP GL P  VK FT   E GR  V+LN  C  KYE  ++++ +V+  + Y 
Sbjct: 30  IDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIVSGTIGYA 89

Query: 87  SLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHC 140
            +  + G+  +ELF+WL VK I VD PSSGLI FD+G+  KQ SLSLFE P  C
Sbjct: 90  QIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDC 143


>AT3G07460.2 | Symbols:  | Protein of unknown function, DUF538 |
           chr3:2384544-2385617 REVERSE LENGTH=271
          Length = 271

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/114 (47%), Positives = 72/114 (63%), Gaps = 1/114 (0%)

Query: 28  IHDLLKSKGLPAGLLPSEVKSFTFY-ENGRLEVFLNAPCLTKYENRVYFERVVTANLTYG 86
           I ++L + GLP GL P  VK FT   E GR  V+LN  C  KYE  ++++ +V+  + Y 
Sbjct: 30  IDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIVSGTIGYA 89

Query: 87  SLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHC 140
            +  + G+  +ELF+WL VK I VD PSSGLI FD+G+  KQ SLSLFE P  C
Sbjct: 90  QIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDC 143


>AT5G16380.1 | Symbols:  | Protein of unknown function, DUF538 |
           chr5:5359730-5360613 REVERSE LENGTH=195
          Length = 195

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 1/113 (0%)

Query: 29  HDLLKSKGLPAGLLPSEVKSFTF-YENGRLEVFLNAPCLTKYENRVYFERVVTANLTYGS 87
           +D L+   LPAG++P  V +F+   + GR  V L  PC  K+EN+ +F+  ++  L+ G 
Sbjct: 32  YDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPCDAKFENQFHFDYNISGVLSDGR 91

Query: 88  LIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHC 140
           +  + G+ Q+ELF+W  VK I VD  SSGLI FD+G+A KQLSLSLFE P  C
Sbjct: 92  IGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVADKQLSLSLFESPRDC 144


>AT1G55265.1 | Symbols:  | Protein of unknown function, DUF538 |
           chr1:20617326-20617853 FORWARD LENGTH=175
          Length = 175

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 2/123 (1%)

Query: 28  IHDLLKSKGLPAGLLPSEVKSFTFYENGRLEVFLNAPCLTKYENR-VYFERVVTANLTYG 86
           IHDLL   G P GLLP+ VKS+T  ++G   V L + C  K+ ++ V++ + +   L+YG
Sbjct: 54  IHDLLPRYGFPKGLLPNNVKSYTISDDGDFTVDLISSCYVKFSDQLVFYGKNIAGKLSYG 113

Query: 87  SLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPEGGL 146
           S+  V G+Q +E F+WLP+   +  DPSS  ++F +G   K L  S+FE+ P C     L
Sbjct: 114 SVKDVRGIQAKEAFLWLPIT-AMESDPSSATVVFSVGFVSKTLPASMFENVPSCSRNLNL 172

Query: 147 RNH 149
           ++ 
Sbjct: 173 QDS 175


>AT5G19860.1 | Symbols:  | Protein of unknown function, DUF538 |
           chr5:6714533-6715837 REVERSE LENGTH=181
          Length = 181

 Score = 86.3 bits (212), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 73/131 (55%)

Query: 28  IHDLLKSKGLPAGLLPSEVKSFTFYENGRLEVFLNAPCLTKYENRVYFERVVTANLTYGS 87
           +++LL   GLP+GLLP  V  FT  ++GR  V L   C  +++  V++++ ++  + YGS
Sbjct: 36  VYELLPKYGLPSGLLPDTVTDFTLSDDGRFVVHLPNSCEIEFDYLVHYDKTISGRIGYGS 95

Query: 88  LIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPEGGLR 147
           +  ++G+Q ++ F+WL V +I VD P S  I F +G  +K+L +  F+    C   G   
Sbjct: 96  ITELKGIQVKKFFIWLDVDEIKVDLPPSDSIYFKVGFINKKLDIDQFKTIHSCHDNGVSG 155

Query: 148 NHVRKEKGFFE 158
           +     K F E
Sbjct: 156 SCGDSWKSFLE 166


>AT2G03350.1 | Symbols:  | Protein of unknown function, DUF538 |
           chr2:1019733-1021071 REVERSE LENGTH=179
          Length = 179

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 6/113 (5%)

Query: 30  DLLKSKGLPAGLLPSEVKSFTFYEN-GRLEVFLNAPCLTKYEN--RVYFERVVTANLTYG 86
           DLLK   LP GL P  +  + F E   +L VF ++PC   +++   + +   V   L  G
Sbjct: 61  DLLKEYNLPPGLFPQNIICYEFDETKNKLTVFFSSPCEVTFKDGSAIRYATRVKGILLRG 120

Query: 87  SLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPH 139
            L+GVEG++  ++ VW+ V  I V+   S  + F  G+  K  S  ++ D PH
Sbjct: 121 KLMGVEGMKT-KVLVWVKVTTISVESSKSDKLWFTAGV-KKSRSKDVY-DTPH 170


>AT5G37070.1 | Symbols:  | Protein of unknown function, DUF538 |
           chr5:14651091-14652147 FORWARD LENGTH=170
          Length = 170

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 30  DLLKSKGLPAGLLPSEVKSFTFY-ENGRLEVFLNAPCLTKYENR--VYFERVVTANLTYG 86
           +LLK  GLP G+ P +  ++ F  E G+L VF+   C   Y +   + F   VT  L  G
Sbjct: 56  ELLKEFGLPVGIFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFSTTVTGYLEKG 115

Query: 87  SLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQ 128
            L  VEG++  ++ +W+ V  I  D   S  + F  G+   +
Sbjct: 116 KLAEVEGMKT-KVMIWVKVTCISAD---SSKVYFTAGIKKSR 153


>AT1G02813.1 | Symbols:  | Protein of unknown function, DUF538 |
           chr1:620773-621222 FORWARD LENGTH=149
          Length = 149

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 28  IHDLLKSKGLPAGLLPSEVKSFTF-YENGRLEVFLNAPCLTKYEN-RVYFERVVTANLTY 85
           ++ +L++  LP G+LP  V  +      G  +V  N  C    ++ +V ++ V++  +T 
Sbjct: 25  VYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNTTCQFSIDSYKVKYKPVISGIITR 84

Query: 86  GSLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHC 140
           G +I + G+  + LF W+ + ++  D      + F +G A ++ S   F D P C
Sbjct: 85  GRVIRLIGVSVKVLFFWINISEVSRDGDD---VEFFVGAASEEFSSKYFVDSPKC 136