Miyakogusa Predicted Gene

Lj0g3v0217409.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0217409.2 Non Chatacterized Hit- tr|B3RPL5|B3RPL5_TRIAD
Putative uncharacterized protein OS=Trichoplax
adhaere,28.86,6e-18,breast cancer carboxy-terminal domain,BRCT domain;
no description,NULL; BRCT domain,BRCT domain; PTC,CUFF.14046.2
         (773 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G77320.1 | Symbols: MEI1 | transcription coactivators | chr1:...   603   e-172
AT1G77320.2 | Symbols: MEI1 | transcription coactivators | chr1:...   581   e-166
AT4G02110.1 | Symbols:  | transcription coactivators | chr4:9351...    60   6e-09
AT1G67180.1 | Symbols:  | zinc finger (C3HC4-type RING finger) f...    56   1e-07

>AT1G77320.1 | Symbols: MEI1 | transcription coactivators |
           chr1:29056740-29062710 FORWARD LENGTH=972
          Length = 972

 Score =  603 bits (1555), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 356/799 (44%), Positives = 479/799 (59%), Gaps = 66/799 (8%)

Query: 1   MEKLILQNGGKYSAELTKNCTHLISNAPEGDKYKVAKRWGHICIVTSKWFDQSIARRACL 60
           MEK+I + GG YSAELTK+CTHLI++A EGDKYKVA++WGHI IVT KWF QSI ++ CL
Sbjct: 203 MEKVISEYGGSYSAELTKSCTHLIADAAEGDKYKVARKWGHIQIVTRKWFQQSIDKKVCL 262

Query: 61  NEESYPVQSGSISSLKVTRDFTVQHSQER------DFGNSQSVATSRAMDSNMPVFSGAE 114
           NEESYPV  GSI   +  RD  V +  E+             V+ +++ DS         
Sbjct: 263 NEESYPVL-GSIPLTRGVRDLGVHNGLEKFPSAATASAADSYVSCAQSRDS--------- 312

Query: 115 SMDLEAKQSEHM-SSSLNAPLFVKEADPEAPPLHTSNELNFDGAVANDSESDDNDLYLSD 173
             D+EA  S+++  +S+N    VKE  P   P     E N DG  A DSES+DNDLYLSD
Sbjct: 313 --DIEASASQNVFPTSMNPSTDVKE--PGGGPTARPQEQNIDGCTARDSESEDNDLYLSD 368

Query: 174 CRILLVGFEASEMRKLVNMVRKGGGSRYMSFNDKLTHIVVGNPTEMEKKDVRSLAALGVI 233
           CRI L+GFEASEMRKL  +VR+GGGSRYM  N+++THIVVG P+E EK++ RS+AA GVI
Sbjct: 369 CRIFLLGFEASEMRKLAKLVRRGGGSRYMLLNERMTHIVVGTPSESEKREARSVAASGVI 428

Query: 234 HVVKTSWLEDCDREKKEVTVLQRHIANDTLLPK--ASTAKGAVTRITSINQGKSSG---- 287
            VV  SWLEDCDREKKE+ V   + AN  +LP+  A   KG+  R++S+ Q K++     
Sbjct: 429 QVVIPSWLEDCDREKKEIPVHNIYTANHLILPRDSACLTKGSFARMSSMEQTKNTHDQTM 488

Query: 288 -FHQSLQTDQVVNIMESRVVVPECXXXXXXXXPDMGISALTSSKAKGKTMSQNQPPDNKL 346
            +  S ++  V N   + +   +          ++       S  + +T+      ++K 
Sbjct: 489 VYDSSSRSINVSNGPATLLGKNKEAMQEFGRKDEIHTGRKIVSPTQKETLISLVTCESKE 548

Query: 347 KVQKMTQHDSSVLHVKTTNVFRGKTFCFSNLFPEERRAEVIQWISQGGGEIISEKTRKSV 406
           +     +        + ++VF+G+TFCFS+ FPE+RR ++++W++QGGGE++++    + 
Sbjct: 549 QRSIQCEFSGQNDQERKSSVFKGETFCFSHSFPEDRRPQIVEWVNQGGGEVVNDPLINNA 608

Query: 407 HYTIECHGVTPRLKGDHEGCYISSHWIRSCLEDGSLLDVDSHILYSPLPCCVPLPGFESF 466
           H+TIECHG     +   +  Y+SSHW+R+CL+ G LL V SHILYSPLPC  PLPGFES 
Sbjct: 609 HFTIECHGGFQSTETT-QTIYVSSHWVRNCLKVGCLLAVSSHILYSPLPCQTPLPGFESL 667

Query: 467 RFCVSQYEEKDRILLRNLCFVLGAKFVEKLTKKVTHLLCKFTNGPKYDAACKWGIRSVTS 526
             C SQ+ EK+  LLRNL  VLGA FVE+LT+KVTHL+C F  G KY  A KWGI SVT 
Sbjct: 668 CICSSQHNEKNVELLRNLSVVLGADFVERLTRKVTHLICNFAKGDKYVRASKWGIISVTP 727

Query: 527 EWIFECVKQNRVVAIDQFLPKEVTAQDQEAGVCTVSQFPTQAVRMIS----DMPSQFPSQ 582
           +W++ECV+QN+VV  D F P+E+T QD+EAG    SQF TQ V M S     +P      
Sbjct: 728 DWLYECVRQNQVVCTDNFHPRELTTQDREAG----SQFHTQFVPMASRDSMSLPVSHSED 783

Query: 583 SQSLGSAASKN------VFCEVGNHGADYTASSTSSKRARHDK---------VPSAINSG 627
            + + S A K+      V+  +G  G + T  S  +K  R  +         +PS  +  
Sbjct: 784 REKIQSFAGKSGCGKGEVYNRLGEIGKEQTFPSKKAKLLRDGQESDVFPVRELPSNCDRP 843

Query: 628 THVNDMNNTEENLVKDAGEISHAVPDVASAIEDLLEQTSKIHDQRPPESTGCERSIYSSD 687
           +H  D   T  ++          VPDVA  IEDLLEQTSKI DQ+ P     E++ +S+ 
Sbjct: 844 SHSGDGIVTGYDVAS-----GREVPDVADTIEDLLEQTSKIQDQKSPGRI-LEKTHFSTS 897

Query: 688 CPVLGEDNSNPHTTFGLSKHSLNR---KDDKGEASEDRRRAGIYDGFSETQTDSQVVSYE 744
                + N+  H+  GLS+H +NR    DD G    D      Y  FSETQT+SQVV YE
Sbjct: 898 ----EQYNTGNHSVTGLSRHWINRVHKNDDMGSPPGD-ATTDTYGNFSETQTESQVVGYE 952

Query: 745 EDLSGRQMLIERVRIRSSM 763
           EDLSGRQMLI+RVR RSS+
Sbjct: 953 EDLSGRQMLIDRVRTRSSL 971


>AT1G77320.2 | Symbols: MEI1 | transcription coactivators |
           chr1:29056740-29062710 FORWARD LENGTH=955
          Length = 955

 Score =  581 bits (1497), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 349/799 (43%), Positives = 470/799 (58%), Gaps = 76/799 (9%)

Query: 1   MEKLILQNGGKYSAELTKNCTHLISNAPEGDKYKVAKRWGHICIVTSKWFDQSIARRACL 60
           MEK+I + GG YSAELTK+C          DKYKVA++WGHI IVT KWF QSI ++ CL
Sbjct: 196 MEKVISEYGGSYSAELTKSC----------DKYKVARKWGHIQIVTRKWFQQSIDKKVCL 245

Query: 61  NEESYPVQSGSISSLKVTRDFTVQHSQER------DFGNSQSVATSRAMDSNMPVFSGAE 114
           NEESYPV  GSI   +  RD  V +  E+             V+ +++ DS         
Sbjct: 246 NEESYPVL-GSIPLTRGVRDLGVHNGLEKFPSAATASAADSYVSCAQSRDS--------- 295

Query: 115 SMDLEAKQSEHM-SSSLNAPLFVKEADPEAPPLHTSNELNFDGAVANDSESDDNDLYLSD 173
             D+EA  S+++  +S+N    VKE  P   P     E N DG  A DSES+DNDLYLSD
Sbjct: 296 --DIEASASQNVFPTSMNPSTDVKE--PGGGPTARPQEQNIDGCTARDSESEDNDLYLSD 351

Query: 174 CRILLVGFEASEMRKLVNMVRKGGGSRYMSFNDKLTHIVVGNPTEMEKKDVRSLAALGVI 233
           CRI L+GFEASEMRKL  +VR+GGGSRYM  N+++THIVVG P+E EK++ RS+AA GVI
Sbjct: 352 CRIFLLGFEASEMRKLAKLVRRGGGSRYMLLNERMTHIVVGTPSESEKREARSVAASGVI 411

Query: 234 HVVKTSWLEDCDREKKEVTVLQRHIANDTLLPK--ASTAKGAVTRITSINQGKSSG---- 287
            VV  SWLEDCDREKKE+ V   + AN  +LP+  A   KG+  R++S+ Q K++     
Sbjct: 412 QVVIPSWLEDCDREKKEIPVHNIYTANHLILPRDSACLTKGSFARMSSMEQTKNTHDQTM 471

Query: 288 -FHQSLQTDQVVNIMESRVVVPECXXXXXXXXPDMGISALTSSKAKGKTMSQNQPPDNKL 346
            +  S ++  V N   + +   +          ++       S  + +T+      ++K 
Sbjct: 472 VYDSSSRSINVSNGPATLLGKNKEAMQEFGRKDEIHTGRKIVSPTQKETLISLVTCESKE 531

Query: 347 KVQKMTQHDSSVLHVKTTNVFRGKTFCFSNLFPEERRAEVIQWISQGGGEIISEKTRKSV 406
           +     +        + ++VF+G+TFCFS+ FPE+RR ++++W++QGGGE++++    + 
Sbjct: 532 QRSIQCEFSGQNDQERKSSVFKGETFCFSHSFPEDRRPQIVEWVNQGGGEVVNDPLINNA 591

Query: 407 HYTIECHGVTPRLKGDHEGCYISSHWIRSCLEDGSLLDVDSHILYSPLPCCVPLPGFESF 466
           H+TIECHG     +   +  Y+SSHW+R+CL+ G LL V SHILYSPLPC  PLPGFES 
Sbjct: 592 HFTIECHGGFQSTETT-QTIYVSSHWVRNCLKVGCLLAVSSHILYSPLPCQTPLPGFESL 650

Query: 467 RFCVSQYEEKDRILLRNLCFVLGAKFVEKLTKKVTHLLCKFTNGPKYDAACKWGIRSVTS 526
             C SQ+ EK+  LLRNL  VLGA FVE+LT+KVTHL+C F  G KY  A KWGI SVT 
Sbjct: 651 CICSSQHNEKNVELLRNLSVVLGADFVERLTRKVTHLICNFAKGDKYVRASKWGIISVTP 710

Query: 527 EWIFECVKQNRVVAIDQFLPKEVTAQDQEAGVCTVSQFPTQAVRMIS----DMPSQFPSQ 582
           +W++ECV+QN+VV  D F P+E+T QD+EAG    SQF TQ V M S     +P      
Sbjct: 711 DWLYECVRQNQVVCTDNFHPRELTTQDREAG----SQFHTQFVPMASRDSMSLPVSHSED 766

Query: 583 SQSLGSAASKN------VFCEVGNHGADYTASSTSSKRARHDK---------VPSAINSG 627
            + + S A K+      V+  +G  G + T  S  +K  R  +         +PS  +  
Sbjct: 767 REKIQSFAGKSGCGKGEVYNRLGEIGKEQTFPSKKAKLLRDGQESDVFPVRELPSNCDRP 826

Query: 628 THVNDMNNTEENLVKDAGEISHAVPDVASAIEDLLEQTSKIHDQRPPESTGCERSIYSSD 687
           +H  D   T  ++          VPDVA  IEDLLEQTSKI DQ+ P     E++ +S+ 
Sbjct: 827 SHSGDGIVTGYDVAS-----GREVPDVADTIEDLLEQTSKIQDQKSPGRI-LEKTHFSTS 880

Query: 688 CPVLGEDNSNPHTTFGLSKHSLNR---KDDKGEASEDRRRAGIYDGFSETQTDSQVVSYE 744
                + N+  H+  GLS+H +NR    DD G    D      Y  FSETQT+SQVV YE
Sbjct: 881 ----EQYNTGNHSVTGLSRHWINRVHKNDDMGSPPGD-ATTDTYGNFSETQTESQVVGYE 935

Query: 745 EDLSGRQMLIERVRIRSSM 763
           EDLSGRQMLI+RVR RSS+
Sbjct: 936 EDLSGRQMLIDRVRTRSSL 954


>AT4G02110.1 | Symbols:  | transcription coactivators |
           chr4:935191-940191 FORWARD LENGTH=1329
          Length = 1329

 Score = 60.1 bits (144), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 428 ISSHWIRSCLEDGSLLDVDSHILYSPLPCCVPLPGFESFRFCVSQYEEKDRILLRNLCFV 487
           ++  W+    + G +LD  + ILY PL     +PG ++   C++ Y+  DR  +  +  +
Sbjct: 75  VTGSWVDHSFDIG-MLDNANSILYRPLRDLNGIPGSKALVVCLTGYQGHDREDIMRMVEL 133

Query: 488 LGAKFVEKL-TKKVTHLLCKFTNGPKYDAACKWG-IRSVTSEWIFECVKQNRVV 539
           +G +F + L   +VTHL+C    G KY+ A +   I+ V   W+ +C+K  +++
Sbjct: 134 MGGQFSKPLVANRVTHLICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLL 187


>AT1G67180.1 | Symbols:  | zinc finger (C3HC4-type RING finger)
           family protein / BRCT domain-containing protein |
           chr1:25130099-25132169 FORWARD LENGTH=453
          Length = 453

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 41/76 (53%)

Query: 470 VSQYEEKDRILLRNLCFVLGAKFVEKLTKKVTHLLCKFTNGPKYDAACKWGIRSVTSEWI 529
           VS Y   DR  L  L    GA +V  +++ +THL+C    G KYD A K+G   V   W+
Sbjct: 8   VSGYHGSDRFKLIKLISHSGASYVGAMSRSITHLVCWKFEGKKYDLAKKFGTVVVNHRWV 67

Query: 530 FECVKQNRVVAIDQFL 545
            ECVK+ R V+   ++
Sbjct: 68  EECVKEGRRVSETPYM 83