Miyakogusa Predicted Gene

Lj0g3v0216909.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0216909.1 tr|A8HQL5|A8HQL5_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_157307 PE=4
SV=1,27.95,4e-17,Tryptophan synthase beta subunit-like PLP-dependent
enzymes,Tryptophan synthase beta subunit-like PL,CUFF.14078.1
         (418 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26115.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzym...   486   e-137
AT3G26115.2 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzym...   478   e-135
AT1G48420.1 | Symbols: D-CDES, ATACD1, ACD1 | D-cysteine desulfh...    62   6e-10

>AT3G26115.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzyme
           family protein | chr3:9542301-9544246 FORWARD LENGTH=427
          Length = 427

 Score =  486 bits (1250), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/414 (57%), Positives = 308/414 (74%), Gaps = 13/414 (3%)

Query: 5   IHSNTLQVISKPKLKTEEFIEKLLNRRWTLPCPETKIHQVIHGN--GLHGRNFLLNTQPA 62
            HS++ ++    ++ + EF+ KLL+R+W L CP + I Q+   +  G+   +FL NT+P 
Sbjct: 20  FHSSSQRIPITSEIDSREFVSKLLDRKWGLQCPASPIQQISVSSVKGIDKFSFLNNTRPH 79

Query: 63  FRDGTVEMDKQKK--SFYIVRDDLLHPLINGNKGRKLDGLLPLIEDYSVTDVVTCGGCQS 120
             D   EM K K+  SFYI+RDDLLHPL+NGNK RKLD LLPL+ED+ VTD+VTCGGCQS
Sbjct: 80  LGD---EMSKSKQGSSFYILRDDLLHPLVNGNKARKLDALLPLVEDHKVTDLVTCGGCQS 136

Query: 121 AHTAAIAVLCAERGIVSHLLLRGEQPEILTGYNLMSTIYGNVTYVPRTIYANREDMLKSY 180
           AHTAA+AV CAERG+ SHLLLRGEQP++LTGYNL+ST+YGNV YVPR+ YANRE+ML++Y
Sbjct: 137 AHTAAVAVSCAERGLRSHLLLRGEQPDVLTGYNLVSTMYGNVQYVPRSRYANREEMLRTY 196

Query: 181 AKSVAGNHGSVHWFSDIIQA--SSNFMQMDVSTSEGNHLQKILIVNEGAGDSVALLGIIR 238
           A  VAG  G+V W  DI++   + N  +MD  +S     +K+LIVNEGAGD++ALLG+ R
Sbjct: 197 ADLVAGEDGTVLWAKDIVEGRDTMNVAKMDDFSSMKTSRRKVLIVNEGAGDALALLGMFR 256

Query: 239 LVQYLSQDHLLGKQRAMKFVLDAGTGTTAVGIGLAAHCLGLPWEVYAVMLADKIDGYRKQ 298
           LVQ+LSQDHLLGK+R +KFV+DAGTGTTAVG+G+AA  LGLPWE+ AVMLAD +  Y++ 
Sbjct: 257 LVQHLSQDHLLGKKRPVKFVVDAGTGTTAVGLGVAAMSLGLPWEINAVMLADTLKNYKRH 316

Query: 299 EERLTSEFKKHFNFEFSEHNLNREDAGIVHWVERGHARKFGNILEGEMEACQQIAQETGI 358
           E+ L +EF + F        L+     ++ W++R H RKFG +LEGE+E C++IAQETG+
Sbjct: 317 EDHLIAEFSRQFPGSVFCSGLDMNQ--MIKWIDRQHPRKFGKVLEGEVEMCRKIAQETGV 374

Query: 359 LVDPVYTLAAWETAMLLSGKEAEGGPEVVMLHTGGTFGMFGLAQRYKNYFGKLK 412
           LVDP+YTLAAWETA  L   + E    VVMLHTGGT GMFGLAQRYK  F  LK
Sbjct: 375 LVDPMYTLAAWETATELV--QDEKSSIVVMLHTGGTLGMFGLAQRYKTCFTNLK 426


>AT3G26115.2 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzyme
           family protein | chr3:9542301-9544246 FORWARD LENGTH=433
          Length = 433

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/420 (56%), Positives = 308/420 (73%), Gaps = 19/420 (4%)

Query: 5   IHSNTLQVISKPKLKTEEFIEKLLNRRWTLPCPETKIHQVIHGN--GLHGRNFLLNTQPA 62
            HS++ ++    ++ + EF+ KLL+R+W L CP + I Q+   +  G+   +FL NT+P 
Sbjct: 20  FHSSSQRIPITSEIDSREFVSKLLDRKWGLQCPASPIQQISVSSVKGIDKFSFLNNTRPH 79

Query: 63  FRDGTVEMDKQKK--SFYIVRDDLLHPLINGNKGRKLDGLLPLIEDYSVTDVVTCGGCQS 120
             D   EM K K+  SFYI+RDDLLHPL+NGNK RKLD LLPL+ED+ VTD+VTCGGCQS
Sbjct: 80  LGD---EMSKSKQGSSFYILRDDLLHPLVNGNKARKLDALLPLVEDHKVTDLVTCGGCQS 136

Query: 121 AHTAAIAVLCAERGIVSHLLLRGEQPEILTGYNLMSTIYGNVTYVPRTIYANREDMLKSY 180
           AHTAA+AV CAERG+ SHLLLRGEQP++LTGYNL+ST+YGNV YVPR+ YANRE+ML++Y
Sbjct: 137 AHTAAVAVSCAERGLRSHLLLRGEQPDVLTGYNLVSTMYGNVQYVPRSRYANREEMLRTY 196

Query: 181 AKSVAGNHGSVHWFSDIIQA--SSNFMQMDVSTSEGNHLQKILIVNEGAGDSVALLGIIR 238
           A  VAG  G+V W  DI++   + N  +MD  +S     +K+LIVNEGAGD++ALLG+ R
Sbjct: 197 ADLVAGEDGTVLWAKDIVEGRDTMNVAKMDDFSSMKTSRRKVLIVNEGAGDALALLGMFR 256

Query: 239 LVQYLSQDHLLGKQRAMKFVLDAGTGTTAVGIGLAAHCLGLPWEVYAVMLADKIDGYRKQ 298
           LVQ+LSQDHLLGK+R +KFV+DAGTGTTAVG+G+AA  LGLPWE+ AVMLAD +  Y++ 
Sbjct: 257 LVQHLSQDHLLGKKRPVKFVVDAGTGTTAVGLGVAAMSLGLPWEINAVMLADTLKNYKRH 316

Query: 299 EERLTSEFKKHFNFEFSEHNLNREDAGIVHWVERGHAR------KFGNILEGEMEACQQI 352
           E+ L +EF + F        L+     ++ W++R H R      +FG +LEGE+E C++I
Sbjct: 317 EDHLIAEFSRQFPGSVFCSGLDMNQ--MIKWIDRQHPRNSFCSCRFGKVLEGEVEMCRKI 374

Query: 353 AQETGILVDPVYTLAAWETAMLLSGKEAEGGPEVVMLHTGGTFGMFGLAQRYKNYFGKLK 412
           AQETG+LVDP+YTLAAWETA  L   + E    VVMLHTGGT GMFGLAQRYK  F  LK
Sbjct: 375 AQETGVLVDPMYTLAAWETATELV--QDEKSSIVVMLHTGGTLGMFGLAQRYKTCFTNLK 432


>AT1G48420.1 | Symbols: D-CDES, ATACD1, ACD1 | D-cysteine
           desulfhydrase | chr1:17896767-17898803 REVERSE
           LENGTH=401
          Length = 401

 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 141/353 (39%), Gaps = 61/353 (17%)

Query: 77  FYIVRDDLLHPLINGNKGRKLDGLLPLIEDYSVTDVVTCGGCQSAHTAAIAVLCAERGIV 136
            +I RDD     ++GNK RKL+ L+    D     V+T GG QS H  A A       + 
Sbjct: 77  LWIKRDDFTGMELSGNKVRKLEFLMAEAVDQHADTVITIGGIQSNHCRATATASNYLNLN 136

Query: 137 SHLLLRGEQPEILTGYNLMSTIYGNVTYVPRTIYANREDMLKSYAKSVAGNHGSVHWFSD 196
           SHL+LR  +  +L   +    + GN+  V R + AN   + K    S+            
Sbjct: 137 SHLILRTSK--LLADED--PGLVGNL-LVERLVGANVHLISKEEYSSIG----------- 180

Query: 197 IIQASSNFMQMDVSTSEGNHLQKILIVNEGAGDSVALLGIIRLVQYLSQDHLLGKQRAMK 256
                S  +   +        +K  ++  G  +S+   G I   + + ++ L  +   +K
Sbjct: 181 -----SEALTNALKEKLEKEGKKPYVIPVGGSNSLGTWGYIEAAREI-EEQLNYRPDDLK 234

Query: 257 F---VLDAGTGTTAVGIGLAAHCLGLPWEVYAVMLADKIDGYRKQEERLTSEFKKHFNFE 313
           F   V+  G+G T  GI L +    L  +V+A  + D  D +    + L        N  
Sbjct: 235 FDDIVVACGSGGTIAGISLGSWLGALKAKVHAFSVCDDPDYFYDFVQGLLDGLHAGVN-- 292

Query: 314 FSEHNLNREDAGIVHWVERGHARKFGNILEGEMEACQQIAQETGILVDPVYTLAAWETAM 373
                 +R+   I +   +G+A         E+E  +++A  TG+++DPVY         
Sbjct: 293 ------SRDIVNIHNAKGKGYAMNTSE----ELEFVKKVASSTGVILDPVY--------- 333

Query: 374 LLSGKEAEG-------------GPEVVMLHTGGTFGMFGLAQRYKNYFGKLKK 413
             SGK A G             G +++ +HTGG  G++    +  +  G   +
Sbjct: 334 --SGKAAYGLINEITKDPKCWEGRKILFIHTGGLLGLYDKVDQMASLMGNWSR 384