Miyakogusa Predicted Gene
- Lj0g3v0216549.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0216549.1 tr|B9MV63|B9MV63_POPTR Chromatin remodeling
complex subunit (Fragment) OS=Populus trichocarpa
GN=CHR,40.74,1e-18,Helicase_C,Helicase, C-terminal; P-loop containing
nucleoside triphosphate hydrolases,NULL; HELICASE,CUFF.13975.1
(131 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 216 4e-57
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 182 4e-47
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 91 3e-19
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 89 8e-19
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 86 5e-18
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 86 8e-18
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 69 6e-13
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 69 7e-13
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 65 1e-11
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 65 2e-11
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 62 8e-11
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 62 8e-11
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 62 1e-10
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 61 2e-10
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 61 2e-10
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 61 2e-10
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 61 2e-10
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 61 2e-10
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 60 3e-10
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 60 3e-10
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 60 3e-10
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 60 3e-10
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 59 1e-09
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 58 2e-09
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 58 2e-09
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 58 2e-09
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 58 2e-09
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 58 2e-09
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 58 2e-09
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 57 3e-09
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 57 5e-09
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 56 5e-09
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 56 6e-09
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 55 1e-08
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 54 3e-08
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 54 3e-08
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 54 3e-08
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 54 3e-08
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 53 7e-08
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 53 7e-08
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 50 5e-07
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 50 5e-07
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 49 1e-06
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 49 1e-06
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 49 1e-06
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 216 bits (549), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/131 (77%), Positives = 109/131 (83%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
ME FN+SPDAK+FFGSIKACGEGISLVGASR+LILDV LNPSVTRQAIGRAFRPGQ K V
Sbjct: 758 METFNSSPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQKKMV 817
Query: 61 FVYRLIAADSPEEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKECGDLFLASPM 120
YRLIA SPEEEDH T FKKE+ISKMWFEWNEYCG + F+VET E GD FL SP
Sbjct: 818 HAYRLIAGSSPEEEDHNTCFKKEVISKMWFEWNEYCGYQNFEVETIDVDEAGDTFLESPA 877
Query: 121 LGEDIKALYKR 131
L EDI+ LYKR
Sbjct: 878 LREDIRVLYKR 888
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 182 bits (463), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 102/131 (77%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
MERFNNS +AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVT+QA+ RA+RPGQ +KV
Sbjct: 684 MERFNNSLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRKV 743
Query: 61 FVYRLIAADSPEEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKECGDLFLASPM 120
+ Y+L+AADSPEEE++ T +KE++SKMWFEWN G F A GD FL +
Sbjct: 744 YAYKLVAADSPEEENYETCTRKEMMSKMWFEWNVGSGREDFGFRAIDADHSGDAFLETTK 803
Query: 121 LGEDIKALYKR 131
+ EDIK LY +
Sbjct: 804 MKEDIKCLYTK 814
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 57/81 (70%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 69
AKVF S KAC EGISLVGASRV++LDV NP+V RQAI RA+R GQ + V+ Y L+A
Sbjct: 1273 AKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKG 1332
Query: 70 SPEEEDHITSFKKELISKMWF 90
+PE + +K+ IS++ F
Sbjct: 1333 TPEGPKYCKQAQKDRISELVF 1353
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 89.0 bits (219), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 6 NSPDA--KVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
N PD+ KV S KAC EGISLVGASRV+ILDV NPSV QAI RAFR GQ + VF+Y
Sbjct: 995 NKPDSGSKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIY 1054
Query: 64 RLIAADSPEEEDHITSFKKELISKMWF 90
L+ D+ E + +K IS++ F
Sbjct: 1055 HLMVKDTSEWNKYCKQSEKHRISELVF 1081
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 86.3 bits (212), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 56/81 (69%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 69
++V SI AC EGISL ASRV++LD NPS T+QAI RAFRPGQ K V+VY+L++
Sbjct: 1130 SRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRG 1189
Query: 70 SPEEEDHITSFKKELISKMWF 90
+ EE+ + + KE +S M F
Sbjct: 1190 TLEEDKYRRTTWKEWVSSMIF 1210
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 85.5 bits (210), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 10 AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAAD 69
++V SI AC EGISL ASRV++LD NPS T+QAI RAFRPGQ K V+VY+L++
Sbjct: 1136 SRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRG 1195
Query: 70 SPEEEDHITSFKKELISKMWFEWNEYCGD 98
+ EE+ + + KE +S M F E+ D
Sbjct: 1196 TLEEDKYRRTTWKEWVSCMIFS-EEFVAD 1223
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FN SP +VF S KA G G++LV A+RV+I D + NPS QA R+FR GQ + V
Sbjct: 587 VDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHV 646
Query: 61 FVYRLIAADSPEEEDHITSFKKELISKM 88
V+RL++A S EE + K+ +S +
Sbjct: 647 VVFRLLSAGSLEELVYTRQVYKQQLSNI 674
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 21/148 (14%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
M+RFN +P +F S ++ G GI+LVGA V+ D NP++ +QA R R GQT++V
Sbjct: 1134 MQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1193
Query: 61 FVYRLIAADSPEEEDHITSFKKELISKMWFEWNEY--------------CGDRAFQV--E 104
+YRLI+ + EE + +K ++ + + EY G +A E
Sbjct: 1194 HIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELFSGHKALTTKDE 1253
Query: 105 TTSAKECG-DLFLASPMLGEDIKALYKR 131
++K CG D+ P+ D++A K+
Sbjct: 1254 KETSKHCGADI----PLSNADVEAALKQ 1277
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 45/74 (60%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FNNS D VF + K G G +L GA+RV+I D NPS QA RA+R GQ K V
Sbjct: 786 IDEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDV 845
Query: 61 FVYRLIAADSPEEE 74
VYRLI + EE+
Sbjct: 846 TVYRLITRGTIEEK 859
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 42/71 (59%)
Query: 3 RFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFV 62
RFN + VF S +ACG GI+L A V+I D NP QA+ RA R GQ+K++ V
Sbjct: 1067 RFNQDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLV 1126
Query: 63 YRLIAADSPEE 73
YRL+ S EE
Sbjct: 1127 YRLVVRASVEE 1137
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
+ R N+ + D F S KA G G++L+GA+R+++ D NP+ +QA R +R GQ K+
Sbjct: 592 VNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKR 651
Query: 60 VFVYRLIAADSPEEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKECGDLF 115
V+VYR ++ + EE+ + KE + K+ +E + Q S ++ DLF
Sbjct: 652 VYVYRFLSTGTIEEKVYQRQMSKEGLQKVI--QHEQTDNSTRQGNLLSTEDLRDLF 705
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
+ R N+ + D F S KA G G++L+GA+R+++ D NP+ +QA R +R GQ K+
Sbjct: 594 VNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKR 653
Query: 60 VFVYRLIAADSPEEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKECGDLF 115
V+VYR ++ + EE+ + KE + K+ +E + Q S ++ DLF
Sbjct: 654 VYVYRFLSTGTIEEKVYQRQMSKEGLQKVI--QHEQTDNSTRQGNLLSTEDLRDLF 707
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ F+N PD KV S+KA G++++ A V++LD+ NP+ QAI RA R GQT+ V
Sbjct: 869 VKEFSNDPDVKVMIMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPV 928
Query: 61 FVYRLIAADSPEEEDHITSFKKE 83
V R+ ++ ED I + ++E
Sbjct: 929 TVTRITIKNT--VEDRILALQEE 949
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
+ +F PD +VF S+KA G ++L AS V ++D NP+V RQA R R GQ K +
Sbjct: 723 INKFKEDPDCRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPI 782
Query: 61 FVYRLIAADSPEEEDHITSFKKELI 85
V R I ++ EE KKEL+
Sbjct: 783 RVVRFIIENTVEERILRLQKKKELV 807
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ F+ PD KV S+KA G+++V A V++LD+ NP+ QAI RA R GQT+ V
Sbjct: 935 VKEFSKKPDVKVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPV 994
Query: 61 FVYRLIAADSPEEEDHITSFKKE 83
V R+ D+ ED I ++E
Sbjct: 995 TVTRITIKDT--VEDRILKLQEE 1015
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FN + + S+KA G G++L AS V ++D NP+V QAI R R GQ + V
Sbjct: 1170 LKEFNETKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTV 1229
Query: 61 FVYRLIAADSPEEE-DHITSFKKELIS 86
FV R I D+ EE + + K+ +I+
Sbjct: 1230 FVRRFIVKDTVEERMQQVQARKQRMIA 1256
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
+E F A +F + + G G++L A RV+++D NPS Q++ RA+R GQTK V
Sbjct: 791 VEEFQEGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDV 850
Query: 61 FVYRLIAADSPEEE 74
VYRL+ + + EE+
Sbjct: 851 IVYRLMTSATVEEK 864
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FNN S +A G+G++L GA V+I D+ NP + RQA R R GQTK V
Sbjct: 647 VDTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPV 706
Query: 61 FVYRLIAADSPEEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKECGDLFLASPM 120
++RL+ + +E + + +K ++ E + D T K G++ LAS +
Sbjct: 707 TIFRLVTKSTVDENIYEIAKRKLVLDAAVLESGVHVDDNG----DTPEKTMGEI-LASLL 761
Query: 121 LG 122
+G
Sbjct: 762 MG 763
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FN PD V S+KA G+++V A V++LD+ NP+ QAI RA R GQT+ V
Sbjct: 1114 VQDFNTLPDVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPV 1173
Query: 61 FVYRLIAADSPEE 73
V R D+ E+
Sbjct: 1174 KVVRFTVKDTVED 1186
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FN P+ V S+KA G+++V A VL+LD+ NP+ QAI RA R GQT+ V
Sbjct: 1008 VQDFNTLPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPV 1067
Query: 61 FVYRLIAADSPEEEDHITSFKKELISKMWFEWNE 94
V R D+ E+ KK ++ F +E
Sbjct: 1068 TVVRFTVKDTVEDRILALQQKKRMMVASAFGEDE 1101
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FN P+ V S+KA G+++V A VL+LD+ NP+ QAI RA R GQT+ V
Sbjct: 1166 VQDFNTLPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPV 1225
Query: 61 FVYRLIAADSPEEEDHITSFKKELISKMWFEWNE 94
V R D+ E+ KK ++ F +E
Sbjct: 1226 TVVRFTVKDTVEDRILALQQKKRMMVASAFGEDE 1259
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ FN PD V S+KA G+++V A V++LD+ NP+ QAI RA R GQT+ V
Sbjct: 1157 VQDFNTLPDVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPV 1216
Query: 61 FVYRLIAADSPEE 73
V R D+ E+
Sbjct: 1217 KVVRFTVKDTVED 1229
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%)
Query: 12 VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 71
V S+KA G GI+L ASRV + D NP+V QA+ R R GQ ++V + R+IA +S
Sbjct: 762 VLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSI 821
Query: 72 EEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSA 108
EE KK+ ++ F+ + +R VE A
Sbjct: 822 EERVLELQQKKKNLANEAFKRRQKKDEREVNVEDVVA 858
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 4 FNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
F + D VF S +A G GI+L A V+ + NP++ QA+ RA R GQTK V VY
Sbjct: 1268 FQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVY 1327
Query: 64 RLIAADSPEEEDHITSFKKELISKMWFEWNEYCGD 98
RLI ++ EE+ + +K + ++ GD
Sbjct: 1328 RLICKETVEEKILHRASQKNTVQQLVMTGGHVQGD 1362
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 4 FNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
F + D VF S +A G GI+L A V+ + NP++ QA+ RA R GQTK V VY
Sbjct: 1301 FQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVY 1360
Query: 64 RLIAADSPEEEDHITSFKKELISKMWFEWNEYCGD 98
RLI ++ EE+ + +K + ++ GD
Sbjct: 1361 RLICKETVEEKILHRASQKNTVQQLVMTGGHVQGD 1395
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 1 MERFNNSPD---AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQT 57
++RFN PD K S +A GI+L A+RV+I+D NP+ QAI RA+R GQ
Sbjct: 1165 VDRFN-EPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQK 1223
Query: 58 KKVFVYRLIAADSPEEEDHITSFKKE 83
K VF YRL+A + EE+ + KE
Sbjct: 1224 KPVFAYRLMARGTIEEKIYKRQVTKE 1249
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 1 MERFNNSPD---AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQT 57
++RFN PD K S +A GI+L A+RV+I+D NP+ QAI RA+R GQ
Sbjct: 1186 VDRFN-EPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQK 1244
Query: 58 KKVFVYRLIAADSPEEEDHITSFKKE 83
K VF YRL+A + EE+ + KE
Sbjct: 1245 KPVFAYRLMARGTIEEKIYKRQVTKE 1270
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 1 MERFNNSPD---AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQT 57
++RFN PD K S +A GI+L A+RV+I+D NP+ QAI RA+R GQ
Sbjct: 1186 VDRFN-EPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQK 1244
Query: 58 KKVFVYRLIAADSPEEEDHITSFKKE 83
K VF YRL+A + EE+ + KE
Sbjct: 1245 KPVFAYRLMARGTIEEKIYKRQVTKE 1270
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 1 MERFNNSPD---AKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQT 57
++RFN PD K S +A GI+L A+RV+I+D NP+ QAI RA+R GQ
Sbjct: 1186 VDRFN-EPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQK 1244
Query: 58 KKVFVYRLIAADSPEEEDHITSFKKE 83
K VF YRL+A + EE+ + KE
Sbjct: 1245 KPVFAYRLMARGTIEEKIYKRQVTKE 1270
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 1 MERFNNSPDAK-VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN K F S +A G GI+L A V+I D NP QA+ RA R GQT K
Sbjct: 654 IDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNK 713
Query: 60 VFVYRLIAADSPEE 73
V +YRLI + EE
Sbjct: 714 VMIYRLINRGTIEE 727
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ F PD +V S++A G ++L AS V ++D NP+V RQA R R GQ K V
Sbjct: 568 LKNFKEEPDCRVLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPV 627
Query: 61 FVYRLIAADSPEEEDHITSFKKE 83
V R I + EE+ KKE
Sbjct: 628 RVVRFIMEKTVEEKILTLQKKKE 650
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 1 MERFNNSPDAKV-FFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN + F S +A G GI+L A V+I D NP QA+ R R GQT K
Sbjct: 542 IDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNK 601
Query: 60 VFVYRLIAADSPEEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKEC 111
V +YRLI + EE + K L+ + C D + +KE
Sbjct: 602 VMIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQHLCQDELDDIIKYGSKEL 653
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 1 MERFNNSPDAKV-FFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
++RFN + F S +A G GI+L A V+I D NP QA+ R R GQT K
Sbjct: 583 IDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNK 642
Query: 60 VFVYRLIAADSPEEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKEC 111
V +YRLI + EE + K L+ + C D + +KE
Sbjct: 643 VMIYRLIHKGTVEERMMEITKNKMLLEHLVVGKQHLCQDELDDIIKYGSKEL 694
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 12 VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 71
+F S +A G GI+L A ++ D NP + QA+ R R GQTK V VYRL A S
Sbjct: 595 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSI 654
Query: 72 EEEDHITSFKKELISKMWFEWNEYCGDRAFQVETTSAKECGDLFLASPMLGEDIKALYK 130
E T K SK+ E + G F E + ++P+ EDI AL K
Sbjct: 655 E-----TRVLKRAYSKLKLE-HVVIGQGQFHQERAKS--------STPLEEEDILALLK 699
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 12 VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 71
+F SI+A G G++L A V++ D NP V QA RA R GQ K V V R +S
Sbjct: 1144 IFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSV 1203
Query: 72 EEE-----DHITSFKKELISKMWFEWNEYCGDRAFQVET 105
EE+ +H + I+ +F+ N DR +E+
Sbjct: 1204 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLES 1242
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 12 VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 71
+F SI+A G G++L A V++ D NP V QA RA R GQ K V V R +S
Sbjct: 1144 IFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSV 1203
Query: 72 EEE-----DHITSFKKELISKMWFEWNEYCGDRAFQVET 105
EE+ +H + I+ +F+ N DR +E+
Sbjct: 1204 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLES 1242
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 12 VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSP 71
+F SI+A G G++L A V++ D NP V QA RA R GQ K V V R +S
Sbjct: 1144 IFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSV 1203
Query: 72 EEE-----DHITSFKKELISKMWFEWNEYCGDRAFQVET 105
EE+ +H + I+ +F+ N DR +E+
Sbjct: 1204 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLES 1242
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 1 MERFNNSPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKV 60
++ F+ V S+KA G GI+L AS ++D NP+V QA+ R R GQTK+V
Sbjct: 922 LKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEV 981
Query: 61 FVYRLIAADSPEEE-DHITSFKKELIS 86
+ R I + EE + + + K+ +IS
Sbjct: 982 KIRRFIVKGTVEERMEAVQARKQRMIS 1008
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1 MERFNN-SPDAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKK 59
M+ FN + D F S +A G GI+L A V+I D NP QA+ RA R GQ +
Sbjct: 998 MDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEV 1057
Query: 60 VFVYRLIAADSPEEE 74
V +YR + + S EEE
Sbjct: 1058 VNIYRFVTSKSVEEE 1072
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 13 FFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPE 72
S+KA G+++V AS V++LD+ NP+ QAI RA R GQT+ V V R+ ++ E
Sbjct: 510 MLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVE 569
Query: 73 EED-HITSFKKELISKMWFE--WNEYC 96
E + K+ +++ E W ++C
Sbjct: 570 ERILTLHERKRNIVASALGEKNWQKFC 596
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 6 NSPDAK--VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
N PD +F SI+A G G++L A V+I D NP QA+ RA R GQT++V V
Sbjct: 1370 NDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVI 1429
Query: 64 RLIAA----DSPEEEDHITS 79
+ A S ++ED + S
Sbjct: 1430 YMEAVVEKLSSHQKEDELRS 1449
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 6 NSPDAK--VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
N PD +F SI+A G G++L A V+I D NP QA+ RA R GQT++V V
Sbjct: 1371 NDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVI 1430
Query: 64 RLIAA----DSPEEEDHITS 79
+ A S ++ED + S
Sbjct: 1431 YMEAVVEKLSSHQKEDELRS 1450
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 6 NSPDAK--VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
N P ++ VF S +A G GI+L A V++ D NP V QA RA R GQ K+V V+
Sbjct: 553 NKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 612
Query: 64 RLIAADSPEEEDHITSFKK 82
R + EE+ ++KK
Sbjct: 613 RFCTESAIEEKVIERAYKK 631
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 6 NSPDAK--VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
N P ++ VF S +A G GI+L A V++ D NP V QA RA R GQ K+V V+
Sbjct: 553 NKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 612
Query: 64 RLIAADSPEEEDHITSFKK 82
R + EE+ ++KK
Sbjct: 613 RFCTESAIEEKVIERAYKK 631
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 6 NSPDAK--VFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAIGRAFRPGQTKKVFVY 63
N P ++ VF S +A G GI+L A V++ D NP V QA RA R GQ K+V V+
Sbjct: 553 NKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 612
Query: 64 RLIAADSPEEEDHITSFKK 82
R + EE+ ++KK
Sbjct: 613 RFCTESAIEEKVIERAYKK 631