Miyakogusa Predicted Gene

Lj0g3v0215599.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0215599.1 Non Chatacterized Hit- tr|I3T3G0|I3T3G0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,95.2,0,Repeated
motif present between transmembrane,Cystinosin/ERS1p repeat; SUBFAMILY
NOT NAMED,NULL; CYST,CUFF.13898.1
         (271 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40670.1 | Symbols:  | PQ-loop repeat family protein / transm...   383   e-107

>AT5G40670.1 | Symbols:  | PQ-loop repeat family protein /
           transmembrane family protein | chr5:16285968-16287591
           FORWARD LENGTH=270
          Length = 270

 Score =  383 bits (984), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 182/268 (67%), Positives = 220/268 (82%), Gaps = 4/268 (1%)

Query: 3   SSWNSEPLHVSYEALGWFAFVCWSISFYPQVILNFRRKSVVGLNFDFIVLNLTKHTAYLI 62
           +SWNS PL +SYE +GW AF  WSISFYPQ+ILNFRR+SVVGLNFDF++LNLTKH++Y+I
Sbjct: 2   ASWNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYMI 61

Query: 63  YNASLYFSPAIQKQYREKYGEKQMIPVAANDVAFSIHAVLLTAISLFQIAIYDRGSQKIS 122
           YN  LYFSP IQKQY + YG+K+MIPVAANDVAFSIHAV++TA++LFQI IY+RG QK+S
Sbjct: 62  YNVCLYFSPVIQKQYFDTYGDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVS 121

Query: 123 KIAYGILLVAWSVAAVCFFIALHDHHWLWLLSIFTAIQISMTVIKYIPQAVMNFMRKSTD 182
           ++A GI++V W  AA+CFFIAL  H WLWL+SIF +IQ+ MT +KYIPQA MNF RKST 
Sbjct: 122 RLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTV 181

Query: 183 GWSIGNILLDFSGGLGNYLQMAMLSIDQGSWVNFSGNIGKLLISLISGFFDILFMIQHYL 242
           GWSIGNILLDF+GGL NYLQM + SIDQ SW NF GN+GK L+SLIS FFDILFM QHY+
Sbjct: 182 GWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYV 241

Query: 243 LYPASKRKSETSPDLDNPKSSNRQLSDN 270
           LYP  ++K   SP+    + SN  L D+
Sbjct: 242 LYP--EKKVSKSPETG--EESNEPLIDS 265