Miyakogusa Predicted Gene
- Lj0g3v0213729.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0213729.1 tr|G7L6M8|G7L6M8_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_7g078900 PE=4 SV=1,28.85,0.15,F-box,F-box domain,
cyclin-like; no description,NULL; seg,NULL; F_box_assoc_1: F-box
protein interac,gene.g16483.t1.1
(361 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23880.1 | Symbols: | F-box and associated interaction domai... 100 2e-21
AT1G33530.1 | Symbols: | F-box family protein | chr1:12159884-1... 78 8e-15
AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction ... 75 6e-14
AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction ... 75 6e-14
AT4G22390.1 | Symbols: | F-box associated ubiquitination effect... 67 3e-11
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 67 3e-11
AT4G04690.1 | Symbols: | F-box and associated interaction domai... 65 1e-10
AT3G10430.1 | Symbols: | F-box and associated interaction domai... 63 3e-10
AT3G07870.1 | Symbols: | F-box and associated interaction domai... 60 2e-09
AT3G52320.1 | Symbols: | F-box and associated interaction domai... 59 4e-09
AT3G16210.1 | Symbols: | F-box family protein | chr3:5494533-54... 58 1e-08
AT3G08750.1 | Symbols: | F-box and associated interaction domai... 57 1e-08
AT1G47790.1 | Symbols: | F-box and associated interaction domai... 55 5e-08
AT1G19160.1 | Symbols: | F-box family protein | chr1:6614162-66... 55 6e-08
AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-1... 55 6e-08
AT4G38870.1 | Symbols: | F-box and associated interaction domai... 55 1e-07
AT3G62380.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box asso... 53 3e-07
AT5G52610.1 | Symbols: | F-box and associated interaction domai... 52 8e-07
AT2G40910.1 | Symbols: | F-box and associated interaction domai... 50 3e-06
AT2G40910.2 | Symbols: | F-box and associated interaction domai... 50 3e-06
AT3G17710.1 | Symbols: | F-box and associated interaction domai... 49 4e-06
AT3G49450.1 | Symbols: | F-box and associated interaction domai... 49 4e-06
AT2G40920.2 | Symbols: | F-box and associated interaction domai... 49 6e-06
AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-68... 49 6e-06
AT2G40920.1 | Symbols: | F-box and associated interaction domai... 49 7e-06
AT2G16450.1 | Symbols: | F-box and associated interaction domai... 49 8e-06
>AT3G23880.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:8622061-8623155
REVERSE LENGTH=364
Length = 364
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 138/294 (46%), Gaps = 41/294 (13%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQF-----IKLHLHRSSSKTKN------TDFAHLR---- 64
PVKSL RFKCV SW+S+IS++ F + L ++++ TK+ T HL+
Sbjct: 27 PVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYGVITTSRYHLKSCCI 86
Query: 65 -LLLNSPS--ESRLATTVAIPDDYIFSGTCNGLICLCTYLKYGRENFKYLYRFWNPATRV 121
L N+ + S + D Y GTC+GL+C ++ Y K LY WNP ++
Sbjct: 87 HSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCF--HVDYD----KSLY-LWNPTIKL 139
Query: 122 MSQHSPPLRFTSTSSW--NYGVGYDCSTDTYKVVVALSHFESGEITVHVYNMGDTCWRTI 179
+ S TS YG GYD S D YKVV L +I +Y+ WR+
Sbjct: 140 QQRLSSSDLETSDDECVVTYGFGYDESEDDYKVVALLQQRHQVKIETKIYSTRQKLWRS- 198
Query: 180 QDSHLPSMHPKCD----AVYVNNTLNWLAIRPYVEDRDRCTILSFDLGKESCAQLPWPYC 235
++ PS D +Y+N TLNW A TI+S+D+ ++ +LP P C
Sbjct: 199 -NTSFPSGVVVADKSRSGIYINGTLNWAATSSSSSW----TIISYDMSRDEFKELPGPVC 253
Query: 236 SQSRYDFYRTKPTLGVLRDCLCIYQAENEIHFAVWQMKEFGVHKSWTRLFNIAG 289
R F TLG LR CL + + VW MKEFG SW++L +I G
Sbjct: 254 C-GRGCF---TMTLGDLRGCLSMVCYCKGANADVWVMKEFGEVYSWSKLLSIPG 303
>AT1G33530.1 | Symbols: | F-box family protein |
chr1:12159884-12161314 FORWARD LENGTH=441
Length = 441
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 122/296 (41%), Gaps = 52/296 (17%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQF----------------IKLHLHRSSSKTKNTDFAHL 63
PVK LVR K +S+ WKS+I IK+ + RS+SK+ F
Sbjct: 110 PVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKKYGLKEIKITVERSTSKSICIKFFSR 169
Query: 64 RLLLNSPSESRLATTVAIPDDYI-FSGTCNGLICLCTYLKYGRENFKYLYRFWNPATRVM 122
R +N+ + DD + G+CNGL+C+ Y ++ Y+Y NP T V
Sbjct: 170 RSGMNAINSD--------SDDLLRVPGSCNGLVCV-----YELDSV-YIY-LLNPMTGVT 214
Query: 123 SQHSPPLRFTSTSSWNYGVGYDCSTDTYKVVVALSHFESGEITVHVYNMGDTCWRTIQDS 182
+PP R T S G G D T TYKV+V G + V+++ WR +
Sbjct: 215 RTLTPP-RGTKLS---VGFGIDVVTGTYKVMVLYGFDRVGTV---VFDLDTNKWRQRYKT 267
Query: 183 HLPS-----MHPKCDAVYVNNTLNWLAIRPYVEDRDRCTILSFDLGKESCAQLPWPYCSQ 237
P P+ + V+VN +L WL + E IL DL E L P
Sbjct: 268 AGPMPLSCIPTPERNPVFVNGSLFWLLASDFSE------ILVMDLHTEKFRTLSQPN-DM 320
Query: 238 SRYDFYRTKPTLGVLRDCLCIYQAENEIHFAVWQMKEFGVHKSWTRL-FNIAGYPY 292
D + L D LC+ +H VW + + + + W R FN+ G+ +
Sbjct: 321 DDVDVSSGYIYMWSLEDRLCVSNVRQGLHSYVWVLVQDELSEKWERTRFNLLGHVF 376
>AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction
domains-containing protein | chr4:7441815-7443157
FORWARD LENGTH=413
Length = 413
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 130/304 (42%), Gaps = 53/304 (17%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKNTDF---AHLRLL------LNSP 70
P K+LVR + +S+ +I+D FI+ HLHR + LRL L+S
Sbjct: 17 PAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGALRLYSVDLDSLDSV 76
Query: 71 SESRLATTVAIPDDYIFSGTCNGLICLCTYLKYGRENFKYLYRFWNPATRVMSQHSP--- 127
S+ P + G+ NGLI G N +NP+TR + + P
Sbjct: 77 SDVEHPMKRGGPTEVF--GSSNGLI--------GLSNSPTDLAVFNPSTRQIHRLPPSSI 126
Query: 128 --PLRFTSTSSWNYGVGYDCSTDTYKVVVAL-----SHFESG---EITVHVYNMGDTCWR 177
P ++ YG+GYD +D YKVV + S E G V V+++ W+
Sbjct: 127 DLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWK 186
Query: 178 TIQDS------------HLPSMHPKCDAVYVNNTLNW-LAIRPYVEDRDRCTILSFDLGK 224
I+ HL ++ + V N+L+W L RP + + I+ FDL
Sbjct: 187 RIESVASSIQLLFYFYYHL--LYRRGYGVLAGNSLHWVLPRRPGLIAFN--LIVRFDLAL 242
Query: 225 ESCAQLPWPYC-SQSRYDFYRTKPTLGVLRDCLCIYQAENEIHFAVWQMKEFGVHKSWTR 283
E + +P + D + +GVL CLC+ ++ + VW MKE+ V SWT+
Sbjct: 243 EEFEIVRFPEAVANGNVDI---QMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTK 299
Query: 284 LFNI 287
+F +
Sbjct: 300 VFTV 303
>AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction
domains-containing protein | chr4:7441815-7443157
FORWARD LENGTH=413
Length = 413
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 130/304 (42%), Gaps = 53/304 (17%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKNTDF---AHLRLL------LNSP 70
P K+LVR + +S+ +I+D FI+ HLHR + LRL L+S
Sbjct: 17 PAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGALRLYSVDLDSLDSV 76
Query: 71 SESRLATTVAIPDDYIFSGTCNGLICLCTYLKYGRENFKYLYRFWNPATRVMSQHSP--- 127
S+ P + G+ NGLI G N +NP+TR + + P
Sbjct: 77 SDVEHPMKRGGPTEVF--GSSNGLI--------GLSNSPTDLAVFNPSTRQIHRLPPSSI 126
Query: 128 --PLRFTSTSSWNYGVGYDCSTDTYKVVVAL-----SHFESG---EITVHVYNMGDTCWR 177
P ++ YG+GYD +D YKVV + S E G V V+++ W+
Sbjct: 127 DLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWK 186
Query: 178 TIQDS------------HLPSMHPKCDAVYVNNTLNW-LAIRPYVEDRDRCTILSFDLGK 224
I+ HL ++ + V N+L+W L RP + + I+ FDL
Sbjct: 187 RIESVASSIQLLFYFYYHL--LYRRGYGVLAGNSLHWVLPRRPGLIAFN--LIVRFDLAL 242
Query: 225 ESCAQLPWPYC-SQSRYDFYRTKPTLGVLRDCLCIYQAENEIHFAVWQMKEFGVHKSWTR 283
E + +P + D + +GVL CLC+ ++ + VW MKE+ V SWT+
Sbjct: 243 EEFEIVRFPEAVANGNVDI---QMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTK 299
Query: 284 LFNI 287
+F +
Sbjct: 300 VFTV 303
>AT4G22390.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr4:11813757-11815074 REVERSE
LENGTH=402
Length = 402
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 69/307 (22%)
Query: 23 SLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKNTDFAHLRLLLNSPSESRLATTVAI- 81
+LV+ + +S+ S+I +F+ HL R + HL +LL P RL TV +
Sbjct: 20 TLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGE-----HLMILLRGP---RLLRTVELD 71
Query: 82 -PDDY--------------IFSGTCNGLICLCTYLKYGRENFKYLYRFWNPATRVMSQH- 125
P++ +F G+ NG+I LC N +NP+TR + +
Sbjct: 72 SPENVSDIPHPLQAGGFTEVF-GSFNGVIGLC--------NSPVDLAIFNPSTRKIHRLP 122
Query: 126 -SP---PLRFTSTSSWNYGVGYDCSTDTYKVV-VALSHFESGE------ITVHVYNMGDT 174
P P R + YG+GYD D +KVV + + G+ + V V+++
Sbjct: 123 IEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPVEVKVFSLKKN 182
Query: 175 CWRTI---------QDSHLPSMHPKCD-AVYVNNTLNWLAIRPYVEDRDRC----TILSF 220
W+ + S+ + P+ V VNN L+W+ R R I+ +
Sbjct: 183 SWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPR-----RQGVIAFNAIIKY 237
Query: 221 DLGKESCAQLPWPYCSQSRYDFYRTKPTLGVLRDCLCIYQAENEIHFAVWQMKEFGVHKS 280
DL + L +P Q Y +GVL C+C+ + H VW +KE+ +KS
Sbjct: 238 DLASDDIGVLSFP---QELY--IEDNMDIGVLDGCVCLMCYDEYSHVDVWVLKEYEDYKS 292
Query: 281 WTRLFNI 287
WT+L+ +
Sbjct: 293 WTKLYRV 299
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD LENGTH=427
Length = 427
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 165/407 (40%), Gaps = 101/407 (24%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLH------------LHR----SSSKTKNTDFAHL 63
P KS+ RF+CVS+ + ++ SD F K+H LHR SS + DF +
Sbjct: 49 PAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIVSSHNLYSLDFNSI 108
Query: 64 ----RLLL----NSPSESRLATTVAIPDDYI-------------------------FSGT 90
R L N P + + + +Y+ G+
Sbjct: 109 GDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNAKSYRRNWVEIVGS 168
Query: 91 CNGLICLCTYLKYGRENFKYLYRFWNPAT----RVMSQHSPP-LRFTSTSSWNYGVGYDC 145
NGL+C+ E +LY NP T R+ P + + + YG G+D
Sbjct: 169 SNGLVCISP-----GEGAVFLY---NPTTGDSKRLPENFRPKSVEYERDNFQTYGFGFDG 220
Query: 146 STDTYKVVVALSHFESGEITVHVYNMGDTCWRTIQDSHLPSMHPK---CDAVYVNNTLNW 202
TD YK+V ++ E + VY++ WR I +L H V+ N ++W
Sbjct: 221 LTDDYKLVKLVATSED-ILDASVYSLKADSWRRI--CNLNYEHNDGSYTSGVHFNGAIHW 277
Query: 203 LAIRPYVEDR-DRCTILSFDLGKESCAQLPWPY----CSQSRYDFYRTKPTLGVLRDCLC 257
+ + E R ++ +++FD+ E ++P P CS +F +G L LC
Sbjct: 278 V----FTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNF-----VVGSLNGRLC 328
Query: 258 IYQAENEIHFAVWQMKEFGVHKSWTRLFNIAGYPYVIKNIMRGHSFAMYMSENGDALLLS 317
+ + ++H +W M E+G KSW+R + N++ + ++N + +LL
Sbjct: 329 VVNSCYDVHDDIWVMSEYGEAKSWSR---------IRINLLYRSMKPLCSTKNDEEVLLE 379
Query: 318 KLGWSQLQAVLY---TQKDNKLEVTNVANYIFDCYAMN-YIESLVPP 360
G VLY T + L + V + D + N Y+ESL+ P
Sbjct: 380 LDG----DLVLYNFETNASSNLGICGVK--LSDGFEANTYVESLISP 420
>AT4G04690.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr4:2373999-2375135
REVERSE LENGTH=378
Length = 378
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 111/280 (39%), Gaps = 23/280 (8%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKNTDFAHLRLLLNSP-----SESR 74
P +SL RFK + W II+ +F+ HL S + D H + + P S+S
Sbjct: 24 PAESLNRFKSTCKQWYGIITSKRFMYNHLDHSPERFIRID-DHKTVQIMDPMTGIFSDSP 82
Query: 75 LATTVAIPDDYIFSGTCNGL-ICLCTYLKYGRENFKYLYRFWNPATRVMSQHSPPLRFTS 133
+ P + C+GL +C+C+ Y R L WNP T+ + P +
Sbjct: 83 VPDVFRSPHSFASMVHCDGLMLCICSDSSYERTREANL-AVWNPVTKKIKWIEPLDSYYE 141
Query: 134 TSSWNYGVGYDCS-TDTYKVVVALSHFESGEITVHVYNMGDTCWRTIQDSHLPSMHPKCD 192
T +G+GYD + + YK+V + +Y WRT+ D+ ++ +C
Sbjct: 142 TDY--FGIGYDNTCRENYKIVRFSGPMSFDDTECEIYEFKSDSWRTL-DTKYWDVYTQCR 198
Query: 193 AVYVNNTLNWLAIRPYVEDRDRCTILSFDLGKESCAQL---PWPYCSQSRYDFYRTKPTL 249
V V + W+A D IL FD E+ + P P R +
Sbjct: 199 GVSVKGNMYWIA------DTKEKFILRFDFSMETFKNVCVCP-PIGCTGRLGCFSGDRLP 251
Query: 250 GVLRDCLCIYQAENEIHFAVWQMKEFGVH-KSWTRLFNIA 288
+L+D + E AVW + S+T+ FN+
Sbjct: 252 LLLQDTDFGGEEEVSTDIAVWLTNKLSDEVVSFTKYFNVT 291
>AT3G10430.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:3242750-3243862
REVERSE LENGTH=370
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 112/262 (42%), Gaps = 26/262 (9%)
Query: 20 PVKSLVRFKCVSQSWKSIIS-DSQFIKLHLHRSSSKTKNTDFAHLRLLLNSPSESRLATT 78
P +SL+RFK + W +IS D +F+ HL +S+ + + +L+ +E +T
Sbjct: 18 PAESLLRFKSTCKKWYELISNDKRFMYKHLDKSTKRFLRIENRERVQILDPVTEILAVST 77
Query: 79 V--AIPDDYIFSGTCNGLICLCTYLKYGRE-NFKYLYRFWNPATRVMS--QHSPPLRFTS 133
+ + Y C+GL+ Y + G + N WNP R + + SPPL
Sbjct: 78 IPNELRHKYFTLIHCDGLMLGMCYEELGSDPNLA----VWNPVMRKIKWIKPSPPLVCYW 133
Query: 134 TSSWNYGVGYDCS-TDTYKVV--VALSHFESGEI--TVHVYNMGDTCWRTIQDSHLPSMH 188
S + G GYD + D YK++ L + E +Y WR+I+ +
Sbjct: 134 GSDY-LGFGYDKTFRDNYKILRFTYLGDDDDDESYPKCQIYEFNSGSWRSIEAKFDGEID 192
Query: 189 PKCDAVYVNNTLNWLAIRPYVEDRDRCTILSFDLGKESCAQLPWPYCSQSRY-DFYRTKP 247
+ D V VN ++ W+ ++ + ILSFD KE+ ++ C Y D R
Sbjct: 193 VEVDGVSVNGSMYWIELQ-----EKKNFILSFDFSKETFNRI----CDSPLYWDIKRLGC 243
Query: 248 TLGVLRDCLCIYQAENEIHFAV 269
G L +A EIH +V
Sbjct: 244 FNGDRLSLLQQNEATREIHVSV 265
>AT3G07870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:2510871-2512124
FORWARD LENGTH=417
Length = 417
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 131/336 (38%), Gaps = 61/336 (18%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIK----------LHLHRSSSKTKNTDFAHLRLLLNS 69
P+ S+ R V +SW+S+++ + L LH S F L S
Sbjct: 41 PISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPIRNGLHFLDL-----S 95
Query: 70 PSESRLAT-------TVAIPDDYIFSGTCNGLICLCTYLKYGRENFKYLYRFWNPATRVM 122
E R+ T ++P+ + G+CNGL+CL L + YLY NP T
Sbjct: 96 EEEKRIKTKKFTLRFASSMPE-FDVVGSCNGLLCLSDSL---YNDSLYLY---NPFTTNS 148
Query: 123 SQHSPPLRFTSTSSWNYGVGYDCSTDTYKVVVAL------------------SHFESGEI 164
+ +G G+ T YKV+ + ++ E+
Sbjct: 149 LELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEV 208
Query: 165 TVHVYNMGDT----CWRTIQDSHLPSMHPKCDAVYVNNTLNWLAI-RPYVEDRDRCTILS 219
+ + T WR++ + + +A+ VN L+++ R +V DR +S
Sbjct: 209 QILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEAL-VNGRLHFVTRPRRHVPDR---KFVS 264
Query: 220 FDLGKESCAQLPWPYCSQSRYDFYRTKPTLGVLRDCLCIYQAENEIHFAVWQMKEFGVHK 279
FDL E ++P P C RT L L+ CLC N +W MK +GV +
Sbjct: 265 FDLEDEEFKEIPKPDCG----GLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKE 320
Query: 280 SWTRLFNIAGY-PYVIKNIMRGHSFAMYMSENGDAL 314
SW + ++I Y P +K + + +ENG +
Sbjct: 321 SWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVV 356
>AT3G52320.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:19403020-19404192
REVERSE LENGTH=390
Length = 390
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 105/247 (42%), Gaps = 47/247 (19%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKNTDFAHLR--------LLLN--- 68
P KSL+RFKCVS+ W S+I+ F SS + FA+L LLL
Sbjct: 40 PAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSP---SCLFAYLVDRENQSKYLLLQSSS 96
Query: 69 SPSESRLATTVAIPDDY----IFSG----TCNGLICLCTYLKYGRENFKYLYRFWNPATR 120
S T+V++ D + I G GL+C T GR + NP+TR
Sbjct: 97 SSRHDHSDTSVSVIDQHSTIPIMGGYLVNAARGLLCYRT----GRR-----VKVCNPSTR 147
Query: 121 VMSQHSPPLRFTSTSSWNYGVGYDCSTDTYKV------VVALSHFESGEITVHVYNMGDT 174
+ + P+ + T+ WN+ G+D D YKV V E V V +G +
Sbjct: 148 QIVE--LPIMRSKTNVWNW-FGHDPFHDEYKVLSLFWEVTKEQTVVRSEHQVLVLGVGAS 204
Query: 175 CWRTIQDSHLPS--MHPKCDAVYVNNTLNWLAIRPYVEDRDRCTILSFDLGKESCAQLPW 232
WR + H P HP + ++ L + A D +RC ++SFDL E +
Sbjct: 205 -WRNTKSHHTPHRPFHPYSRGMTIDGVLYYSA----RTDANRCVLMSFDLSSEEFNLIEL 259
Query: 233 PYCSQSR 239
P+ + SR
Sbjct: 260 PFENWSR 266
>AT3G16210.1 | Symbols: | F-box family protein |
chr3:5494533-5495615 REVERSE LENGTH=360
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 34/282 (12%)
Query: 21 VKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKNTDFAHLRLLLNSPSESRLATTVA 80
+K L RF+CV ++W+ +I+D F + + S +K + + +L + +
Sbjct: 19 MKDLARFRCVCKTWRDLINDPGFTETYRDMSPAKFVSFYDKNFYMLDVEGKHPVITNKLD 78
Query: 81 IPDD--YIFSGTCNGLIC---LCTYLKYGRENFKYLYRFWNPATRVMSQHSPPLRFTSTS 135
P D I TC L C LC LK + WNP ++ P + ++
Sbjct: 79 FPLDQSMIDESTC-VLHCDGTLCVTLK------NHTLMVWNPFSKQFKIVPNPGIYQDSN 131
Query: 136 SWNYGVGYDCSTDTYKVVVALSHFESGEITVHVYNMGDTCWRTIQDSHLPSMHPK-CDAV 194
G GYD D YKVV + + T HV+ W P H +
Sbjct: 132 I--LGFGYDPVHDDYKVVTFIDRLDVS--TAHVFEFRTGSWGESLRISYPDWHYRDRRGT 187
Query: 195 YVNNTLNWLAIRPYVEDRDRCTILSFDLGKESCAQLPWPYCSQSRYDFYRTKPTLGVLRD 254
+++ L W+A R DR IL F+L +LP P +Q T LGV
Sbjct: 188 FLDQYLYWIAYR---SSADRF-ILCFNLSTHEYRKLPLPVYNQG-----VTSSWLGVTSQ 238
Query: 255 CLCIYQAE---NEIHFAVWQMKEFGVHKSWTRLFNIAGYPYV 293
LCI + E EI +V M++ G SW+++ +++ ++
Sbjct: 239 KLCITEYEMCKKEIRISV--MEKTG---SWSKIISLSMSSFI 275
>AT3G08750.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:2656716-2657825
REVERSE LENGTH=369
Length = 369
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHL-HRSSSKTKNTDFAHLRLLLNSPSESRLATT 78
P +SL+RFK + W ++I++ +F+ HL H S + T + + +++ +E + +
Sbjct: 25 PAESLIRFKSTCKKWYNLITEKRFMYNHLDHYSPERFIRT---YDQQIIDPVTE--ILSD 79
Query: 79 VAIPDDY-----IFSGT-CNGLICLCTYLKYGRENFKYLYRFWNPATRVMSQHSPPLRFT 132
IPD++ I+S C+GL+ LCT K+ WNP R + P + +
Sbjct: 80 ALIPDEFRDLYPIYSMVHCDGLM-LCTCRKWDNS-----LAVWNPVLREIKWIKPSVCYL 133
Query: 133 STSSWNYGVGYD--CSTDTYKVVVALSHF---ESGEITVHVYNMGDTCWRTIQDSHLPSM 187
T G+GYD S D YK++ L + + +Y W+T+ +
Sbjct: 134 HTDY--VGIGYDDNVSRDNYKILKLLGRLPKDDDSDPNCEIYEFKSDSWKTLVAKFDWDI 191
Query: 188 HPKC-DAVYVNNTLNWLAIRPYVEDRDRCTILSFDLGKESCAQL 230
+C + V V + W+A + ++ TI+ FD E+ ++
Sbjct: 192 DIRCNNGVSVKGKMYWIAKK-----KEDFTIIRFDFSTETFKEI 230
>AT1G47790.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:17600004-17601173
REVERSE LENGTH=389
Length = 389
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 33/183 (18%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKT------KNTD----FAHLRLLLNS 69
PVKS+VRF+CVS+ W SII+D FIK + +SS++ K +D F+ + +S
Sbjct: 38 PVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLLFCFKQSDKLFVFSIPKHHYDS 97
Query: 70 PSESRLAT---TVAIPDDYIF---SGTCNGLIC---LCTYLKYGRENFKYLYRFWNPATR 120
S S+ A V +P ++ + + + +GLIC L T + WNP+ R
Sbjct: 98 NSSSQAAIDRFQVKLPQEFSYPSPTESVHGLICFHVLATVI------------VWNPSMR 145
Query: 121 VMSQHSPPLRFTSTSSWNYGVGYDCSTDTYKVVVALSHFESGEITVHVYNMGDTCWRTIQ 180
P + S +GYD +KVV + E V WRT++
Sbjct: 146 QFLTLPKPRK--SWKELTVFLGYDPIEGKHKVVCLPRNRTCDECQVLTLGSAQKSWRTVK 203
Query: 181 DSH 183
H
Sbjct: 204 TKH 206
>AT1G19160.1 | Symbols: | F-box family protein |
chr1:6614162-6615214 REVERSE LENGTH=350
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 95/233 (40%), Gaps = 39/233 (16%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKNTDFA------HLRLLLNSPSES 73
PVKSL RF CVS+ SII FI L+ R+S++ FA R S S+
Sbjct: 15 PVKSLARFLCVSKRCYSIIRSRHFINLYQSRASTRESRVMFAFRDTNTFFRWNFFSLSQP 74
Query: 74 RLATTVAIPDDYIFSGTCNGLICLCTYLKYGRENFKYLYRFW--NPATRVMSQH---SPP 128
+ T Y NGLIC+ ++++R W NP T+ ++ P
Sbjct: 75 PSSVTNIDSTSYCMPVCVNGLICV-----------EHMFRLWICNPVTKKITLFPDCGPR 123
Query: 129 LRFTSTSSWNYGVGYDCSTDTYKVVVALSHFESGEITVHVYNMGDT-CWRTIQ-DSHLPS 186
+FT+ + +GYD YKV+ V V+ GD WR I+ D + S
Sbjct: 124 KQFTT-----WYMGYDPINYQYKVLYLSREHLIAPYIVEVFTFGDEGSWRMIEADENFHS 178
Query: 187 MHPKCDAVYVNNTLNWLAIRPYVEDRDRCTILSFDLGKESCA---QLPWPYCS 236
P+ V + L + A D I+ FD+ E ++P CS
Sbjct: 179 --PETRGVCTHGVLYYGAY-----TGDGAKIVRFDVRTEKFGKFIEMPAEACS 224
>AT1G30920.1 | Symbols: | F-box family protein |
chr1:11004242-11005444 REVERSE LENGTH=400
Length = 400
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 157/371 (42%), Gaps = 52/371 (14%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKNTDFAHLRLLLNSPSESRLATTV 79
P KS+ R +CVS+ W+S+I S F +L L RSSS+ HL + + E +
Sbjct: 23 PSKSIARCRCVSKLWESMIRQSYFTELFLTRSSSR------PHLLIAVEQEGEWKF---F 73
Query: 80 AIPDDYIFSGTCNGLICLCTYLKY------------------------GRENFKYLYRFW 115
++P + G + ++ +LK+ ++ +L
Sbjct: 74 SLPQPKNYLGKSSLVVAANLHLKFFEDKRPQHGCSYASSLIYFPNMTIRKKGDDHLGVIC 133
Query: 116 NPATRVMSQHS----PPLRFTSTSSWNYGVGYDCSTDTYKVVVALSHFESGEITVHVYNM 171
NP+T Q+ PPL + + +G+D +KV++ + F+ + H+ +
Sbjct: 134 NPST---GQYGYVILPPLLDFKSVPYGKFLGFDPIDKQFKVLIPIFDFDKHQTDHHILTL 190
Query: 172 G--DTCWRTIQDSHLPSMHPKCDAVYVNNTLNWLAIRPYVEDRDRCTILSFDLGKESCAQ 229
G WR IQ S L + + +N L +LA Y D++ ++ FD+ E+
Sbjct: 191 GAETVGWRKIQ-SPLRYLPHSNGTICINGILYYLAKINYAMDKN--VLVCFDVRSENFVF 247
Query: 230 LPW-PYCSQSRYDFYRTKPTLGVLRDCLCIYQAENEIHFAVWQMKEFGVHKSWTRLFNIA 288
L YCS ++ Y+ K LG++ + + +VW +++ G + T ++ +
Sbjct: 248 LRLNTYCSSTKLVNYKGK--LGMINQEY-VDDGGFPLKLSVWVLEDVGKEEWSTYVYTLR 304
Query: 289 GYPYVIKNIMRGHSFAMYMSENGDALLLSKLGWSQLQAVLYTQKD-NKLEVTNVANYIFD 347
V + ++ + + ++ +G+ +L+ K + VLY D N L V
Sbjct: 305 DDNKV--DQVKYNLSVVGVTASGEIVLVKKTQTLKPFYVLYFNPDKNTLLTVEVKGLHRG 362
Query: 348 CYAMNYIESLV 358
YA++ I + V
Sbjct: 363 LYAVHRIYAFV 373
>AT4G38870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr4:18132583-18133863
REVERSE LENGTH=426
Length = 426
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 147/371 (39%), Gaps = 66/371 (17%)
Query: 21 VKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKNTDFAHLRLLLNSP-SESRLATTV 79
+K L+RF CVS+ W SII D F+KL L+ S + K+ F L S S L +T
Sbjct: 67 LKPLIRFLCVSKLWASIIRDPYFMKLFLNESLKRPKSLVFVFRAQSLGSIFSSVHLKSTR 126
Query: 80 AI--------------------PDDYIFSGTCNGLICLCTYLKYGRENFKYLYRFWNPAT 119
I S + +GLIC YG + +Y NP T
Sbjct: 127 EISSSSSSSSASSITYHVTCYTQQRMTISPSVHGLIC------YGPPSSLVIY---NPCT 177
Query: 120 RVMSQHSPPLRFTSTSSWNYGVGYDCSTDTYKVVVALSHFE--------SGEITVHVYNM 171
R S P ++ + N +GYD YKVV + EI V
Sbjct: 178 R-RSITLPKIK-AGRRAINQYIGYDPLDGNYKVVCITRGMPMLRNRRGLAEEIQVLTLGT 235
Query: 172 GDTCWRTIQDSHLPSMHPKCDAVYVNNTLNWLAIRPYVEDR-DRCTILSFDLGKES--CA 228
D+ WR I D +P P + + +N L + R ++ + + I+SFD+ E
Sbjct: 236 RDSSWRMIHDI-IPPHSPVSEELCINGVLYY---RAFIGTKLNESAIMSFDVRSEKFDLI 291
Query: 229 QLPWPYCSQSRYDFYRTKPTLGVLRDCLCIYQAENEIHFAVWQMKEFGVHKSWTR----L 284
++P + S S+ Y K L V+ Y+ + +W +++ + W++ L
Sbjct: 292 KVPCNFRSFSKLAKYEGK--LAVI-----FYEKKTSGIIGLWILED-ASNGEWSKKTFAL 343
Query: 285 FNIAGYPYVIKNIMRGHSFAMYMSENGDALLLSKLGWSQLQAVLYTQ-KDNKLEVTNVAN 343
N+A I++ F ++ + + S L + +Y K+NK V
Sbjct: 344 PNLAA-SSTNSRILKLQKFRTTDADTCEIIFTPSYAHSSLSSAIYCDLKENK-----VRK 397
Query: 344 YIFDCYAMNYI 354
++ + + NY+
Sbjct: 398 FVKEGWTENYL 408
>AT3G62380.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box
associated interaction domain (InterPro:IPR017451); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G71320.1); Has 422 Blast hits to 419
proteins in 26 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink). |
chr3:23083609-23084852 REVERSE LENGTH=325
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 32/213 (15%)
Query: 89 GTCNGLICLCTYLKYGRENFKYLYRFWNPATRVMSQHSPPL--RFTSTSSW------NYG 140
G CNG++C+ + Y+Y NPATR + SP +T + W N G
Sbjct: 76 GYCNGIVCI--------YDLGYIYLI-NPATRKLRILSPEFLREYTGRTGWSNDLPINVG 126
Query: 141 VGYDCSTDTYKVVVALSHFESGEITVHVYNMGDTCWRTIQDSHLPSMHPKCD----AVYV 196
G D T TYKV++ + F+ + N+ + R + + P + + +++
Sbjct: 127 FGRDMVTGTYKVIL-MYLFDRNFVKTEALNLKNGERRYV---YFPISYGQLGNDKRSIFA 182
Query: 197 NNTLNWLAIRPYVE--DRDRCTILSFDLGKESCAQLPWPYCSQSRYDFYRTKPTLGVLRD 254
N +L WL +P V+ + + DL E+ +P P S Y Y L L+D
Sbjct: 183 NGSLYWLP-KPDVDFYTNQLIKLAAIDLHTETFRYVPLP----SWYTKYCKSVYLWSLKD 237
Query: 255 CLCIYQAENEIHFAVWQMKEFGVHKSWTRLFNI 287
LC+ VW +++ W ++F++
Sbjct: 238 SLCVSDVLQNPSVDVWSLQQEEPSVKWEKMFSV 270
>AT5G52610.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:21346423-21347478
REVERSE LENGTH=351
Length = 351
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 118/287 (41%), Gaps = 53/287 (18%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKNTDFAHLRLLLNS---------- 69
PVK L R CV + W +II FI L+ RSS++ FA LR + S
Sbjct: 15 PVKPLARCLCVCKLWATIIRSRYFINLYQSRSSTRQPYVMFA-LRDIFTSCRWHFFSSSQ 73
Query: 70 PSESRLATTVA-----IPDDYIFSGTCNGLICLCTYLKYGRENFKYLYRFW--NPATR-- 120
PS AT A PD NGLIC+ +Y+ + W NPATR
Sbjct: 74 PSLVTKATCSANNSSHTPD------CVNGLICV-----------EYMSQLWISNPATRKG 116
Query: 121 -VMSQHSPPLRFTSTSSWNYGVGYDCSTDTYKVVVALSHFESGEITVHVYNM-GDTCWRT 178
++ Q +P +F + +GYD YKV+ + + V+ + G W+
Sbjct: 117 VLVPQSAPHQKFR-----KWYMGYDPINYQYKVLFFSKQYLLSPYKLEVFTLEGQGSWKM 171
Query: 179 IQDSHLPSMHPKCDAVYVNNTLNWLAIRPYVEDRDRCTILSFDLGKESCAQ-LPWPYCSQ 237
I+ ++PS P + ++ + + A + ++ F + E + P +
Sbjct: 172 IEVENIPS--PSTRGICIDGVVYYGA-----QTAHGLRLVRFYVATEKFGDFIEIPVGAS 224
Query: 238 SRYDFYRTKPTLGVLRDCLCIYQAENEIHFAVWQMKEFGVHKSWTRL 284
+ YD L + L + A++ + +W +++ G + W+++
Sbjct: 225 NVYDMNFGYSKLVNYQGKLALLAAKSMSMYDLWVLEDAG-KQEWSKV 270
>AT2G40910.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:17069938-17071554
REVERSE LENGTH=449
Length = 449
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 94/238 (39%), Gaps = 50/238 (21%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKN-------TDFAHLRLLLNSPSE 72
P KS+VRFKC+S+ W S+IS F L S ++ K D R+LL+ S
Sbjct: 82 PAKSMVRFKCISKQWSSLISCRYFCN-SLFTSVTRKKQPHIHMCLVDHGGQRVLLSLSST 140
Query: 73 SRLATTVAIPDDYIFSGT-------CNGLICLCTYLKYGRENFKYLYRFWNPATR----V 121
S T + D +G GL+C K N R PA +
Sbjct: 141 SPDNTCYVVDQDLSLTGMGGFFLNLVRGLLCFSVREKACIYNPTTRQRLTLPAIKSDIIA 200
Query: 122 MSQHSPPLRFTSTSSWNYGVGYDCSTDTYKVVVAL---SHFESGEITVH---VYNMGDTC 175
+ +R Y +G+D D YK+V + S F + + H V G +
Sbjct: 201 LKDERKDIR--------YYIGHDPVNDQYKLVCTIGISSAFFTNLKSEHWVFVLEAGGS- 251
Query: 176 WRTIQDSHLPSMHPKCDAV---YVNNT----LNWLAIRPYVEDRDRCTILSFDLGKES 226
WR ++ L S HP + ++N + + WL D D C ++SFD+ E
Sbjct: 252 WRKVRT--LESYHPHAPSTVGQFINGSVVYYMAWL-------DMDTCAVVSFDITSEE 300
>AT2G40910.2 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:17069938-17071501
REVERSE LENGTH=442
Length = 442
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 92/238 (38%), Gaps = 50/238 (21%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKN-------TDFAHLRLLLNSPSE 72
P KS+VRFKC+S+ W S+IS F L S ++ K D R+LL+ S
Sbjct: 75 PAKSMVRFKCISKQWSSLISCRYFCN-SLFTSVTRKKQPHIHMCLVDHGGQRVLLSLSST 133
Query: 73 SRLATTVAIPDDYIFSGT-------CNGLICLCTYLKYGRENFKYLYRFWNPATR----V 121
S T + D +G GL+C K N R PA +
Sbjct: 134 SPDNTCYVVDQDLSLTGMGGFFLNLVRGLLCFSVREKACIYNPTTRQRLTLPAIKSDIIA 193
Query: 122 MSQHSPPLRFTSTSSWNYGVGYDCSTDTYKVVVALSHFES------GEITVHVYNMGDTC 175
+ +R Y +G+D D YK+V + + E V V G +
Sbjct: 194 LKDERKDIR--------YYIGHDPVNDQYKLVCTIGISSAFFTNLKSEHWVFVLEAGGS- 244
Query: 176 WRTIQDSHLPSMHPKCDAV---YVNNT----LNWLAIRPYVEDRDRCTILSFDLGKES 226
WR ++ L S HP + ++N + + WL D D C ++SFD+ E
Sbjct: 245 WRKVRT--LESYHPHAPSTVGQFINGSVVYYMAWL-------DMDTCAVVSFDITSEE 293
>AT3G17710.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:6055597-6056703
FORWARD LENGTH=368
Length = 368
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 81/205 (39%), Gaps = 35/205 (17%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSK----TKNTDFAHLRLLLNSPSESRL 75
P +SLVRF+ V + W + SD +F+K HL R+ + T++ + + L E R
Sbjct: 19 PPRSLVRFRTVCKHWNGLFSDKRFVKKHLVRARPQFIFLTESKKMYSIEIDLGGTIEVRE 78
Query: 76 AT----TVAIPDDYIFSGTCNGLICLCTYLKYGRENFKYLYRFWNPATRV---MSQHSPP 128
+ ++ C+GL+ R+ +K WNP R +
Sbjct: 79 VPYDFHCQPMKKNFTTIMACDGLL--------FRDFWKQGVAVWNPWLRQVGWIEYEDKG 130
Query: 129 LRFTSTSSWNYGVGYD-CSTDT-YKVVVALS-------HFESGEITVHVYNMGDTCWRTI 179
RF GVGYD C D YK++ + + G +Y ++ I
Sbjct: 131 FRFC-------GVGYDSCKPDKCYKILGYFNCTRRLSDSLQEGYYQAAIYECASQAFKFI 183
Query: 180 QDSHLPSMHPKCDAVYVNNTLNWLA 204
+ ++ P D + VN L WLA
Sbjct: 184 DTPNPFNLWPNKDPLSVNGNLYWLA 208
>AT3G49450.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:18337305-18338498
REVERSE LENGTH=397
Length = 397
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 121/290 (41%), Gaps = 37/290 (12%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSK----------TKNTDFAHLRLLLNS 69
P KS RF+CVS W S++ L L RSS++ K + F+ L++
Sbjct: 45 PAKSAARFRCVSNDWNSLLRSPYLTNLFLKRSSARPHLLITFQAEGKWSFFSSPEYLISD 104
Query: 70 PSESRLATT--VAIPDDYIFSGTCN---GLICLCTYLKYGRENFKYLYRFWNPATRVMSQ 124
+ + + + +P DY F G C GL+C R+ + NP+T +
Sbjct: 105 QNSNLVVVDNHMDVPKDYSF-GVCVPVCGLMCTSNEWVLSRKRDARMM-ICNPSTGQF-K 161
Query: 125 HSPPLRFTSTSSWNYGVGYDCSTDTYKVVVALSH-----FESGEITVHVYNMGDTCWRTI 179
P +R + Y +GY+ YKV+ F++ E V G WR +
Sbjct: 162 SLPKVRSCRGNVITY-IGYNPIEKQYKVLCMTIREKPFKFKAEEHQVLTLGTGKLKWRML 220
Query: 180 QDS--HLPSMHPKCDAVYVNNTLNWLAIRPYVEDRDRCTILSFDLGKESCAQLPWPYCSQ 237
+ S H P H ++ +N L +LA++ E ++ T+ SF + E+ +P
Sbjct: 221 ECSVDHYPYYH---GSICINGVLFYLAMKS--ESKEYMTV-SFHMKDENFMFIPNQDLLS 274
Query: 238 SRYDFYRTKPTLGVLRDCLCIYQAENEIHFAVWQMKEFGVHKSWTRLFNI 287
+ ++ K LG +R + ++ F +W + V++ W R ++
Sbjct: 275 TLINY---KGRLGGIRHKSFGFMDGGDVGFELWILDV--VNQEWIRSIHV 319
>AT2G40920.2 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:17072586-17073719
REVERSE LENGTH=377
Length = 377
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 99/249 (39%), Gaps = 55/249 (22%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTK-------NTDFAHLRLLLNSPSE 72
P+ SL RFKCVS+ W S+IS F L L+ + ++ + D H R+LL+ S
Sbjct: 8 PLTSLTRFKCVSKQWSSLISSRYFCNL-LYTTVTRQQPRLYMCLKDDGGH-RVLLSISSP 65
Query: 73 SRLATTVAIPDDYI--------FSGTCNGLICLCTYLKYGRENFKYLYRFWNPATRVMSQ 124
SR T+ + + + F GL+C K R +NP+T+ +
Sbjct: 66 SRGNTSFVVVEQDLSIPGMGGFFLNVVRGLMCFSRRKK---------ARIYNPSTKQLLT 116
Query: 125 HSPPLRFTSTSSWN-------YGVGYDCSTDTYKVV--VALSHF------ESGEITVHVY 169
P ++ + Y +G+D +D YK+V VA+S E V
Sbjct: 117 -LPAIKSDIVAQQGQTKHHPRYYIGHDPVSDQYKLVCTVAISSLLPRLGNLKSEHWVFAL 175
Query: 170 NMGDTCWRTIQ-----DSHLPSMHPKCDAVYVNNTLNWLAIRPYVEDRDRCTILSFDLGK 224
G + W+ + H PS + + V + W D C ++SFD+
Sbjct: 176 EAGGS-WKKVVPLENYRHHAPSTEGRSTSGSVVRYMAW-------PDNYNCVVVSFDIRS 227
Query: 225 ESCAQLPWP 233
E +P P
Sbjct: 228 EQLTIIPVP 236
>AT2G15640.1 | Symbols: | F-box family protein |
chr2:6816792-6818072 REVERSE LENGTH=426
Length = 426
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 82/211 (38%), Gaps = 28/211 (13%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTKNTDFAHLRLL------------- 66
P KS+ RF CVS+ W SI F +L L RSS+K + FA +
Sbjct: 19 PAKSVARFHCVSKQWGSIFGSPYFKELFLTRSSTKPRLL-FAMAEKVNEEKNCVWRFFST 77
Query: 67 --LNSPSESRLATTVAIPDDYIFSGTCNGLICLCTYLKYGRENFK----YLYRFWNPATR 120
L +P E +T VA + ++ IC C LKY + YLY AT
Sbjct: 78 PQLENPYEKSSSTLVAAAEFHVKFSPDKLYICHCYDLKYFSIGYASGLIYLYGDRGEATP 137
Query: 121 VMSQHSP------PLRFTSTSSWNYGVGYDCSTDTYKVVVALSHFESGEITVHVYNMGDT 174
++ + P R+T ++++ G+D YK + G + + G
Sbjct: 138 LICNPTTGRYAILPNRYTYRKAYSF-FGFDPIDKQYKALSIFYPSGPGHSKILTFGAGHM 196
Query: 175 CWRTIQDSHLPSMHP-KCDAVYVNNTLNWLA 204
WR I H K + + +N L +L
Sbjct: 197 KWRKINCPLRYDRHDIKSEGICINGVLYYLG 227
>AT2G40920.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:17072586-17074012
REVERSE LENGTH=436
Length = 436
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 99/249 (39%), Gaps = 55/249 (22%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSKTK-------NTDFAHLRLLLNSPSE 72
P+ SL RFKCVS+ W S+IS F L L+ + ++ + D H R+LL+ S
Sbjct: 67 PLTSLTRFKCVSKQWSSLISSRYFCNL-LYTTVTRQQPRLYMCLKDDGGH-RVLLSISSP 124
Query: 73 SRLATT-VAIPDDYIFSG-------TCNGLICLCTYLKYGRENFKYLYRFWNPATRVMSQ 124
SR T+ V + D G GL+C K R +NP+T+ +
Sbjct: 125 SRGNTSFVVVEQDLSIPGMGGFFLNVVRGLMCFSRRKK---------ARIYNPSTKQLLT 175
Query: 125 HSPPLRFTSTSSWN-------YGVGYDCSTDTYKVV--VALSHF------ESGEITVHVY 169
P ++ + Y +G+D +D YK+V VA+S E V
Sbjct: 176 -LPAIKSDIVAQQGQTKHHPRYYIGHDPVSDQYKLVCTVAISSLLPRLGNLKSEHWVFAL 234
Query: 170 NMGDTCWRTIQ-----DSHLPSMHPKCDAVYVNNTLNWLAIRPYVEDRDRCTILSFDLGK 224
G + W+ + H PS + + V + W D C ++SFD+
Sbjct: 235 EAGGS-WKKVVPLENYRHHAPSTEGRSTSGSVVRYMAW-------PDNYNCVVVSFDIRS 286
Query: 225 ESCAQLPWP 233
E +P P
Sbjct: 287 EQLTIIPVP 295
>AT2G16450.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:7131520-7132803
REVERSE LENGTH=427
Length = 427
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 87/211 (41%), Gaps = 31/211 (14%)
Query: 20 PVKSLVRFKCVSQSWKSIISDSQFIKLHLHRSSSK-----------TKNTD-----FAHL 63
P KS+ RF CVS+ W SI F +L L RSS+K K D F+
Sbjct: 19 PAKSVRRFHCVSKRWASIFGSPYFKELFLTRSSTKPRLLFAIAEKGNKEKDCVWRFFSSP 78
Query: 64 RLLLNSPSESRLATTVAIPDDYIFSGTCNGLICLCTYLKYGRENFKY--LYRFWNPATRV 121
+ L +P E +T VA + ++ N LIC LKY + + +Y + N
Sbjct: 79 Q--LENPYEKSSSTLVATAEFHVRFSPDNLLICHYYDLKYFSIGYAFGLIYIYGNRGRAR 136
Query: 122 MSQHSP--------PLRFTSTSSWNYGVGYDCSTDTYKVVVALSHFESGEITVHVYNMGD 173
+P P R+T ++++ G+D YK + + G V + GD
Sbjct: 137 PLICNPTTGRYAILPNRYTYRKAFSF-FGFDPIDKQYKALSMVYPSGPGHSRVITFGAGD 195
Query: 174 TCWRTIQDSHLPSMHPKCDAVYVNNTLNWLA 204
WR I+ S + K + V +N L +L
Sbjct: 196 LKWRRIKCSLRHDI--KSEGVCINGVLYYLG 224