Miyakogusa Predicted Gene

Lj0g3v0213659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0213659.1 tr|G7IK10|G7IK10_MEDTR Separin OS=Medicago
truncatula GN=MTR_2g007790 PE=4 SV=1,53.19,0.000000000000002,
,CUFF.13744.1
         (88 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G22970.2 | Symbols: ESP | homolog of separase | chr4:12033703...    59   5e-10
AT4G22970.1 | Symbols: RSW4, AESP, ESP | homolog of separase | c...    59   5e-10

>AT4G22970.2 | Symbols: ESP | homolog of separase |
          chr4:12033703-12043572 REVERSE LENGTH=2177
          Length = 2177

 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 8/69 (11%)

Query: 28 SDYLRPFSDLNNSNSNQ---TLIRSLAKRFLPFLNTSLSILPKRLPRISTNLID-----E 79
          SDYL+PFS L+ S   Q   T IR+LAK+FLPFLN S+S+LPKRL   +++        +
Sbjct: 25 SDYLKPFSTLSTSRKKQDRATTIRALAKQFLPFLNKSISLLPKRLSVANSDKEARESALD 84

Query: 80 FFLVYSLCL 88
           F  Y LCL
Sbjct: 85 LFRAYELCL 93


>AT4G22970.1 | Symbols: RSW4, AESP, ESP | homolog of separase |
          chr4:12033703-12043572 REVERSE LENGTH=2180
          Length = 2180

 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 8/69 (11%)

Query: 28 SDYLRPFSDLNNSNSNQ---TLIRSLAKRFLPFLNTSLSILPKRLPRISTNLID-----E 79
          SDYL+PFS L+ S   Q   T IR+LAK+FLPFLN S+S+LPKRL   +++        +
Sbjct: 25 SDYLKPFSTLSTSRKKQDRATTIRALAKQFLPFLNKSISLLPKRLSVANSDKEARESALD 84

Query: 80 FFLVYSLCL 88
           F  Y LCL
Sbjct: 85 LFRAYELCL 93